NO05G00720, NO05G00720 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO05G00720 vs. NCBI_GenBank
Match: CBN80076.1 (Pre-mRNA processing ribonucleoprotein, binding region; NOSIC [Ectocarpus siliculosus]) HSP 1 Score: 265.8 bits (678), Expect = 2.300e-67 Identity = 139/272 (51.10%), Postives = 193/272 (70.96%), Query Frame = 0 Query: 125 LPKLKGKTLDVVATLSKTRRYQEHLEKVKDAISIENPPPMSVPLESDPEYQLIVSSNRLVQDIDEEILTVHRFVVDLYSLKFPELESLVPNKLDYVRTVQKIGNEMDLTIVDLNDLLPSATVMVVSVTASSTSGKPLPPSLLSECLGGCDAVLSLMEARSLVLSYVERRMSVLAPNTCALVGSKIAAQLMGLAGGLVSLSRIPASHIQVMGQEKKHLQGMAAAQGIPHAGVLIGSDVVMSAPPALRQKALRLVASKFALTTRMDAYQQEGGG 397 L ++ +T+D VA L K+ R++ + ++ + + E P P LE DPEY+L+V+SN L+QDID E++ VHRFVVD YS KFPEL+SL+P DYVRTVQ + NEMD+T V+L+ LP TVMVVSVT S+TSG+PL L EC+ GC+ +L A++ +L +VE RM+ +APN CAL+GS+I AQL+GL GGL ++S+ P+ ++QVMGQEKK L G ++ + HAG+L SDVV APP LR KALR+ A+K +L +R D+Y + G Sbjct: 98 LGRIGDRTVDSVAKLRKSDRFKSQMAEIDECLKRE-PAPRVGALEDDPEYKLVVASNELIQDIDPEMVEVHRFVVDRYSQKFPELDSLIPQPADYVRTVQVMRNEMDMTQVELDSALPQTTVMVVSVTGSTTSGQPLSEEDLHECIKGCEEYEALAAAKASILDFVETRMTSMAPNVCALIGSRITAQLLGLTGGLTAMSKTPSCNLQVMGQEKKTLSGFSSKATVSHAGLLYQSDVVQLAPPYLRTKALRVTAAKVSLASRFDSYGNDPSG 368
BLAST of NO05G00720 vs. NCBI_GenBank
Match: XP_022956658.1 (U4/U6 small nuclear ribonucleoprotein Prp31 homolog isoform X1 [Cucurbita moschata] >XP_023004221.1 U4/U6 small nuclear ribonucleoprotein Prp31 homolog isoform X1 [Cucurbita maxima] >XP_023526610.1 U4/U6 small nuclear ribonucleoprotein Prp31 homolog isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 250.0 bits (637), Expect = 1.300e-62 Identity = 134/273 (49.08%), Postives = 187/273 (68.50%), Query Frame = 0 Query: 125 LPKLKGKTLDVVATLSKTRRYQEHLEKVKDAISIE-NPPPMSVPLESDPEYQLIVSSNRLVQDIDEEILTVHRFVVDLYSLKFPELESLVPNKLDYVRTVQKIGNEMDLTIVDLNDLLPSATVMVVSVTASSTSGKPLPPSLLSECLGGCDAVLSLMEARSLVLSYVERRMSVLAPNTCALVGSKIAAQLMGLAGGLVSLSRIPASHIQVMGQEKKHLQGMAAAQGIPHAGVLIGSDVVMSAPPALRQKALRLVASKFALTTRMDAYQQEGGG 397 L L LD V+ L KT+RY + ++KV DA+ ++ N LE DPEYQLIV N L DI+ EI+ +H F+ D Y LKFPELESLV + +DY R V+KIGNEMDLT+VDL LLPSA +MVVSVTAS+TSGKPLP +L + + CD L+L A+ +VL++VE RM +APN A+VGS +AA+LMG AGGLV+L+++PA ++Q++G +KK+L G + A G + +++ S PP L+ +A RL+A+K L R+D+ + + G Sbjct: 43 LESLNYDDLDSVSKLQKTQRYNDIMQKVADALEMDSNVSNQGFVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDKYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAVIMVVSVTASTTSGKPLPEEILQKTIDACDRALTLDSAKKMVLNFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGLVALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLIAAKSTLAARVDSTRGDPTG 315
BLAST of NO05G00720 vs. NCBI_GenBank
Match: XP_022956659.1 (U4/U6 small nuclear ribonucleoprotein Prp31 homolog isoform X2 [Cucurbita moschata] >XP_023004304.1 U4/U6 small nuclear ribonucleoprotein Prp31 homolog isoform X2 [Cucurbita maxima] >XP_023526619.1 U4/U6 small nuclear ribonucleoprotein Prp31 homolog isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 250.0 bits (637), Expect = 1.300e-62 Identity = 134/273 (49.08%), Postives = 187/273 (68.50%), Query Frame = 0 Query: 125 LPKLKGKTLDVVATLSKTRRYQEHLEKVKDAISIE-NPPPMSVPLESDPEYQLIVSSNRLVQDIDEEILTVHRFVVDLYSLKFPELESLVPNKLDYVRTVQKIGNEMDLTIVDLNDLLPSATVMVVSVTASSTSGKPLPPSLLSECLGGCDAVLSLMEARSLVLSYVERRMSVLAPNTCALVGSKIAAQLMGLAGGLVSLSRIPASHIQVMGQEKKHLQGMAAAQGIPHAGVLIGSDVVMSAPPALRQKALRLVASKFALTTRMDAYQQEGGG 397 L L LD V+ L KT+RY + ++KV DA+ ++ N LE DPEYQLIV N L DI+ EI+ +H F+ D Y LKFPELESLV + +DY R V+KIGNEMDLT+VDL LLPSA +MVVSVTAS+TSGKPLP +L + + CD L+L A+ +VL++VE RM +APN A+VGS +AA+LMG AGGLV+L+++PA ++Q++G +KK+L G + A G + +++ S PP L+ +A RL+A+K L R+D+ + + G Sbjct: 12 LESLNYDDLDSVSKLQKTQRYNDIMQKVADALEMDSNVSNQGFVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDKYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAVIMVVSVTASTTSGKPLPEEILQKTIDACDRALTLDSAKKMVLNFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGLVALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLIAAKSTLAARVDSTRGDPTG 284
BLAST of NO05G00720 vs. NCBI_GenBank
Match: XP_024376065.1 (U4/U6 small nuclear ribonucleoprotein Prp31 homolog isoform X1 [Physcomitrella patens] >PNR54505.1 hypothetical protein PHYPA_008182 [Physcomitrella patens]) HSP 1 Score: 249.6 bits (636), Expect = 1.700e-62 Identity = 136/265 (51.32%), Postives = 182/265 (68.68%), Query Frame = 0 Query: 125 LPKLKGKTLDVVATLSKTRRYQEHLEKVKDAISI-ENPPPMSVPLESDPEYQLIVSSNRLVQDIDEEILTVHRFVVDLYSLKFPELESLVPNKLDYVRTVQKIGNEMDLTIVDLNDLLPSATVMVVSVTASSTSGKPLPPSLLSECLGGCDAVLSLMEARSLVLSYVERRMSVLAPNTCALVGSKIAAQLMGLAGGLVSLSRIPASHIQVMGQEKKHLQGMAAAQGIPHAGVLIGSDVVMSAPPALRQKALRLVASKFALTTRMD 389 +P LK LD VA L K++R+ + ++KV +A++ + E DPEYQLIV N L DID EI +H F+ D Y KFPELESLV + +DY R V++IGNEMDLT+VDL LLPSAT+MVVSVTAS+TSGKPL L + + CD L+L EA+ VL +VE RM +APN A+VGS +AA+LMG+AGGL +LS++PA ++Q++G +KK+L G + A +PH G + +++V S PP LR KA RLVA K L R+D Sbjct: 154 VPILKFDDLDSVAKLQKSQRFHDIMKKVDEAMANGTESSSKGLVAEDDPEYQLIVECNALSVDIDNEITIIHNFIRDKYRAKFPELESLVLHPIDYSRLVKQIGNEMDLTLVDLEGLLPSATIMVVSVTASTTSGKPLSEENLQKTIEACDRALALDEAKKKVLEFVESRMGYIAPNLSAVVGSTVAAKLMGVAGGLAALSKMPACNVQILGAKKKNLAGFSTATALPHTGFVFHTEIVQSTPPPLRMKACRLVAGKSTLAARVD 418
BLAST of NO05G00720 vs. NCBI_GenBank
Match: XP_024376066.1 (U4/U6 small nuclear ribonucleoprotein Prp31 homolog isoform X2 [Physcomitrella patens]) HSP 1 Score: 249.6 bits (636), Expect = 1.700e-62 Identity = 136/265 (51.32%), Postives = 182/265 (68.68%), Query Frame = 0 Query: 125 LPKLKGKTLDVVATLSKTRRYQEHLEKVKDAISI-ENPPPMSVPLESDPEYQLIVSSNRLVQDIDEEILTVHRFVVDLYSLKFPELESLVPNKLDYVRTVQKIGNEMDLTIVDLNDLLPSATVMVVSVTASSTSGKPLPPSLLSECLGGCDAVLSLMEARSLVLSYVERRMSVLAPNTCALVGSKIAAQLMGLAGGLVSLSRIPASHIQVMGQEKKHLQGMAAAQGIPHAGVLIGSDVVMSAPPALRQKALRLVASKFALTTRMD 389 +P LK LD VA L K++R+ + ++KV +A++ + E DPEYQLIV N L DID EI +H F+ D Y KFPELESLV + +DY R V++IGNEMDLT+VDL LLPSAT+MVVSVTAS+TSGKPL L + + CD L+L EA+ VL +VE RM +APN A+VGS +AA+LMG+AGGL +LS++PA ++Q++G +KK+L G + A +PH G + +++V S PP LR KA RLVA K L R+D Sbjct: 4 VPILKFDDLDSVAKLQKSQRFHDIMKKVDEAMANGTESSSKGLVAEDDPEYQLIVECNALSVDIDNEITIIHNFIRDKYRAKFPELESLVLHPIDYSRLVKQIGNEMDLTLVDLEGLLPSATIMVVSVTASTTSGKPLSEENLQKTIEACDRALALDEAKKKVLEFVESRMGYIAPNLSAVVGSTVAAKLMGVAGGLAALSKMPACNVQILGAKKKNLAGFSTATALPHTGFVFHTEIVQSTPPPLRMKACRLVAGKSTLAARVD 268
BLAST of NO05G00720 vs. NCBI_GenBank
Match: XP_024577164.1 (u4 u6 small nuclear ribonucleoprotein prp31-like [Plasmopara halstedii] >CEG40795.1 u4 u6 small nuclear ribonucleoprotein prp31-like [Plasmopara halstedii]) HSP 1 Score: 249.2 bits (635), Expect = 2.200e-62 Identity = 139/284 (48.94%), Postives = 190/284 (66.90%), Query Frame = 0 Query: 114 DVERGSEFEKALPKLKGKTLDVVA--TLSKTRRYQEHLEKVKDAISIENPPPMSV----PL-ESDPEYQLIVSSNRLVQDIDEEILTVHRFVVDLYSLKFPELESLVPNKLDYVRTVQKIGNEMDLTIV-DLNDLLPSATVMVVSVTASSTSGKPLPPSLLSECLGGCDAVLSLMEARSLVLSYVERRMSVLAPNTCALVGSKIAAQLMGLAGGLVSLSRIPASHIQVMGQEKKHLQGMAAAQGIPHAGVLIGSDVVMSAPPALRQKALRLVASKFALTTRMDA 390 D E G++ L K K V A TL + +Y H+EK++ + +++ S+ PL E PEY L+V+SN L+ ID+EI VHRF+ D+Y+ KFPEL+SLVPN LDY R V+ +GNEMDLT+V +L +LPS+ V+ +SVT S TSGKPL P L C+ CD +LSL ++++L +VE RM LAPN LVG++IAAQL+GLAGG+ L+RIP+ ++QV+GQEKK L G ++A + H G+L SD+V S PP LR KA R VA K AL R+D+ Sbjct: 64 DSESGTKKADDLIKSNNKHRSVAAVLTLKYSPKYLSHVEKIQQYVDVDDESAASISKPRPLEEGSPEYDLVVTSNDLMVQIDDEIEVVHRFIADIYAAKFPELDSLVPNALDYARVVKAVGNEMDLTLVEELPKILPSSAVIGISVTGSGTSGKPLDPLALKVCMEACDELLSLENDKNMILRFVESRMKYLAPNLSQLVGTRIAAQLIGLAGGVAQLARIPSCNLQVLGQEKKVLSGFSSAAALKHTGILFFSDLVQSVPPYLRMKACRAVAGKLALMARVDS 347
BLAST of NO05G00720 vs. NCBI_GenBank
Match: OWZ23553.1 (U4/U6 small nuclear ribonucleoprotein Prp31 [Phytophthora megakarya]) HSP 1 Score: 248.4 bits (633), Expect = 3.800e-62 Identity = 137/281 (48.75%), Postives = 190/281 (67.62%), Query Frame = 0 Query: 114 DVERGSEFEKAL-PKLKGKTLDVVATLSKTRRYQEHLEKVKDAISIENPPPMSVP---LESDPEYQLIVSSNRLVQDIDEEILTVHRFVVDLYSLKFPELESLVPNKLDYVRTVQKIGNEMDLTIV-DLNDLLPSATVMVVSVTASSTSGKPLPPSLLSECLGGCDAVLSLMEARSLVLSYVERRMSVLAPNTCALVGSKIAAQLMGLAGGLVSLSRIPASHIQVMGQEKKHLQGMAAAQGIPHAGVLIGSDVVMSAPPALRQKALRLVASKFALTTRMDA 390 ++E ++ +AL K + + VA L ++ +Y EH++K++ + + N + P E EY L+V+SN L+ ID+EI VHRF+ ++Y+ KFPEL+SLVPN LDY R VQ IGNEMDLT+V +L LLPS+ V+ +SVT S TSGKPL P L C CD +LSL + ++++L +VE RM LAPN LVG++IAAQL+GLAGG+ L+RIP+ ++QV+GQEKK L G ++A + H GVL SD+V S PP LR KA R VA K AL R+D+ Sbjct: 58 ELEEPADLAEALRSNAKQRGVATVANLKRSSKYVEHVQKIQQYVDVGNASTSAKPQPLQEGSVEYDLVVTSNDLMVQIDDEIEAVHRFIAEIYAAKFPELDSLVPNALDYARVVQAIGNEMDLTLVEELPKLLPSSAVIGISVTGSGTSGKPLGPEDLKTCTEACDELLSLDKDKNMILRFVESRMKYLAPNVSQLVGTRIAAQLIGLAGGVAQLARIPSCNLQVLGQEKKVLSGFSSAAALKHTGVLFFSDLVQSVPPYLRMKACRAVAGKLALMARVDS 338
BLAST of NO05G00720 vs. NCBI_GenBank
Match: PTQ39988.1 (hypothetical protein MARPO_0042s0037 [Marchantia polymorpha]) HSP 1 Score: 248.4 bits (633), Expect = 3.800e-62 Identity = 134/258 (51.94%), Postives = 184/258 (71.32%), Query Frame = 0 Query: 133 LDVVATLSKTRRYQEHLEKVKDAISIENPPPMSVPL-ESDPEYQLIVSSNRLVQDIDEEILTVHRFVVDLYSLKFPELESLVPNKLDYVRTVQKIGNEMDLTIVDLNDLLPSATVMVVSVTASSTSGKPLPPSLLSECLGGCDAVLSLMEARSLVLSYVERRMSVLAPNTCALVGSKIAAQLMGLAGGLVSLSRIPASHIQVMGQEKKHLQGMAAAQGIPHAGVLIGSDVVMSAPPALRQKALRLVASKFALTTRMDA 390 LD VA L K++R+ + +KV +A++ + + + E DPEYQLIV N L DID EI+ +H F+ D Y LKFPELESLV + +DY R V+KI NEMDLT+VDL LLPSAT+MVVSVTAS+TSGKPL L + L CD L+L EA+ VL++VE RM +APN A+VGS++AA+L+G+AGGL SL+++PA ++Q++G +KK+L G + A +PH G + +++V S PPALR +A RLVA K L R+D+ Sbjct: 50 LDSVAKLQKSQRFHDLTKKVDEALAKGSEDSKTGRVSEDDPEYQLIVDCNTLSVDIDNEIVIIHNFIRDKYRLKFPELESLVLHPIDYSRVVRKIANEMDLTLVDLEGLLPSATIMVVSVTASTTSGKPLSEENLQKTLDACDRALALDEAKKKVLAFVESRMGYIAPNLSAIVGSEVAAKLIGVAGGLSSLAKMPACNVQILGAKKKNLAGFSTATALPHTGFVFHTEIVQSTPPALRTRACRLVAGKSTLAARVDS 307
BLAST of NO05G00720 vs. NCBI_GenBank
Match: GAY05142.1 (U4/U6 small nuclear ribonucleoprotein Prp31 [Pythium insidiosum]) HSP 1 Score: 247.7 bits (631), Expect = 6.400e-62 Identity = 125/260 (48.08%), Postives = 182/260 (70.00%), Query Frame = 0 Query: 130 GKTLDVVATLSKTRRYQEHLEKVKDAISIENPPPMSVPLESDPEYQLIVSSNRLVQDIDEEILTVHRFVVDLYSLKFPELESLVPNKLDYVRTVQKIGNEMDLTIVDLNDLLPSATVMVVSVTASSTSGKPLPPSLLSECLGGCDAVLSLMEARSLVLSYVERRMSVLAPNTCALVGSKIAAQLMGLAGGLVSLSRIPASHIQVMGQEKKHLQGMAAAQGIPHAGVLIGSDVVMSAPPALRQKALRLVASKFALTTRMDA 390 GK L +A L ++++Y +H++ ++ + P +E EY+L+V+SN L+ ID+EI +HRFV ++Y+ +FPEL++LVPN LDY R VQ IGNEMD+T+VDL+ LLPSA V+ +SVT S+TSGKPL P L CL C +LSL + + ++L +VE RM+ LAPN LVG++IAAQL+GLAGG+ +LSRIP+ ++QV+GQ++K L G ++ + H GV+ D+V + PP LR KA R +A K AL R+D+ Sbjct: 703 GKGLSAIAHLKRSKKYIDHVQTIQTHVDKNEPIHADRLVEGSAEYELVVTSNDLMVQIDDEIAAIHRFVAEIYAKRFPELDTLVPNALDYARVVQAIGNEMDMTLVDLSQLLPSAAVISISVTGSATSGKPLTPEDLKICLDACAELLSLSDDKQMILRFVESRMNFLAPNVSQLVGTRIAAQLVGLAGGVANLSRIPSCNLQVLGQQRKVLSGFSSTAALRHTGVIFYCDLVQNVPPYLRMKACRALAGKIALMARVDS 962
BLAST of NO05G00720 vs. NCBI_GenBank
Match: GAX92944.1 (Hypothetical protein PINS_000853 [Pythium insidiosum]) HSP 1 Score: 247.7 bits (631), Expect = 6.400e-62 Identity = 125/260 (48.08%), Postives = 182/260 (70.00%), Query Frame = 0 Query: 130 GKTLDVVATLSKTRRYQEHLEKVKDAISIENPPPMSVPLESDPEYQLIVSSNRLVQDIDEEILTVHRFVVDLYSLKFPELESLVPNKLDYVRTVQKIGNEMDLTIVDLNDLLPSATVMVVSVTASSTSGKPLPPSLLSECLGGCDAVLSLMEARSLVLSYVERRMSVLAPNTCALVGSKIAAQLMGLAGGLVSLSRIPASHIQVMGQEKKHLQGMAAAQGIPHAGVLIGSDVVMSAPPALRQKALRLVASKFALTTRMDA 390 GK L +A L ++++Y +H++ ++ + P +E EY+L+V+SN L+ ID+EI +HRFV ++Y+ +FPEL++LVPN LDY R VQ IGNEMD+T+VDL+ LLPSA V+ +SVT S+TSGKPL P L CL C +LSL + + ++L +VE RM+ LAPN LVG++IAAQL+GLAGG+ +LSRIP+ ++QV+GQ++K L G ++ + H GV+ D+V + PP LR KA R +A K AL R+D+ Sbjct: 745 GKGLSAIAHLKRSKKYIDHVQTIQTHVDKNEPIHADRLVEGSAEYELVVTSNDLMVQIDDEIAAIHRFVAEIYAKRFPELDTLVPNALDYARVVQAIGNEMDMTLVDLSQLLPSAAVISISVTGSATSGKPLTPEDLKICLDACAELLSLSDDKQMILRFVESRMNFLAPNVSQLVGTRIAAQLVGLAGGVANLSRIPSCNLQVLGQQRKVLSGFSSTAALRHTGVIFYCDLVQNVPPYLRMKACRALAGKIALMARVDS 1004 The following BLAST results are available for this feature:
BLAST of NO05G00720 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO05G00720 ID=NO05G00720|Name=NO05G00720|organism=Nannochloropsis oceanica|type=gene|length=4359bpback to top protein sequence of NO05G00720.1 >NO05G00720.1-protein ID=NO05G00720.1-protein|Name=NO05G00720.1|organism=Nannochloropsis oceanica|type=polypeptide|length=414bpback to top Synonyms
Publications
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