NO05G00610, NO05G00610 (gene) Nannochloropsis oceanica

Overview
NameNO05G00610
Unique NameNO05G00610
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1869
Alignment locationchr5:203439..205307 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:203439..205307 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR031793KICSTOR_ITFG2
Homology
BLAST of NO05G00610 vs. NCBI_GenBank
Match: EWM28335.1 (hypothetical protein Naga_100109g4 [Nannochloropsis gaditana])

HSP 1 Score: 401.7 bits (1031), Expect = 4.000e-108
Identity = 256/615 (41.63%), Postives = 352/615 (57.24%), Query Frame = 0
Query:    7 NDEMSAGSSASEMSSVPPEAAPTISSADIGEEVFFLARKELDFGANHAHTALLLADIDDDGQQELIVGSLDGKLAVYKGLERTEPWALATGLGMLRVFATGRVWPWLKAKRQPPQASAMKFTSTAASTKEEACESEAEDVDVPPREHPSQLIAVTVEGDLYVFDFRNAPH-SNLSSPLSTVHSNTVSEQRASQSNMKDNNILQSPSPAQNPPPWKLAPIQTLSVEPNVTAALIVDVDGDGHQELLLGRMDGVVQAFGWRLQPLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYKYP---EPELYEKGTGHVSSSVVSLSTVRFKGPEGSALCVVAGLDTGTVEVLRCHWRGNVDDNAPFSSLVDLGVGGGLPLPHCGWSGPLTCCSLGSGGPSGSRG-GFAVAGLDGRLAMGVVEPPRKRQEQQPPGSDEDLV--WRTEWSLQTPQPFYAIAPFNVSRNDFEKSGFAACAWSGFTCLVTAAGTRSSSDGVSPVNIAVFDPSKMFVPPLRGFVAGCFGEHNEPCLLYSCADGHILVFHDLERQLQQFREVSPDTEDETAGAVRQLRSEEAQRLVKAWVDLYLERSADDTGTETKGDA-SAKNKGIKSDKGAP 614
            N   ++G+S S  SS+     P  ++  + +E++ L RKEL FG NHAHTA+ LAD+D DGQQE +VGSLDG LA+YKGL    PWA+ATGLGMLRVF+ G++ P    + Q P +   K  S   S  E+  +++A     P R  P QL+A+TVEGD+++FDF+N P    L+SP       + +E+   +S+   +  +   S A + P   L P  + +V PNVTAALI+DVDGDG QEL+LG  DG +Q  GWR                                      + P     +++EKG    S+S+VSLS++          C+  GL+ GT+EVLRC      D     +SLV+L +GGGLPLP  GWSGPLTCC+L     S +RG  FAVAGLDGR+ + VV        ++   +DE  +  W+T WS+QT  P Y +AP  +   D E  GFAACAWSG T  V    + +   G   V   VFDPSKM +PP+RGF+AG FG  NEPCL YSCADGHI+VFH+LE+QL++ ++ + + E+E A A R+LR+ E Q LV AWV ++L ++ +  G   +G+   A+    +  KG P
Sbjct:   12 NKAEASGTSPSP-SSLATGFFPGSTNLQV-DEIYLLTRKELYFGPNHAHTAMALADLDGDGQQEFMVGSLDGTLAIYKGLAGRVPWAVATGLGMLRVFSCGQLLPDCDIETQSPLS---KHCSEKVS-GEKGGKAQATAGTRPAR--PKQLVALTVEGDVHLFDFKNDPSLLTLTSPTKP----SYAEKHGGRSSPAQHTDVPVFS-AWDTPSLSLQPSHSFTVAPNVTAALILDVDGDGCQELVLGYTDGKLQVLGWR-------------------SAWRLTEDAGPDDSRPCSERVPGGAPVQMFEKGVATASASIVSLSSLGADDSSERPECIAVGLEAGTIEVLRCSSGAAGDREPLLTSLVELQIGGGLPLPRFGWSGPLTCCALPKDVDSRARGLAFAVAGLDGRMGVAVVGKEGGGAGEESQAADEGGLGTWKTVWSVQTRHPLYTVAPLFLGTGD-EGWGFAACAWSGLTYWVLTKASSAGQAGAEKVR--VFDPSKMLMPPVRGFLAGAFGPDNEPCLFYSCADGHIVVFHELEKQLRRLQKGTEEYEEEVAKAARELRAPETQELVDAWVKVHLTQAGETAGGVDEGETPQAEVLEPEEGKGGP 591          
BLAST of NO05G00610 vs. NCBI_GenBank
Match: ETE59331.1 (Integrin-alpha FG-GAP repeat-containing protein 2, partial [Ophiophagus hannah])

HSP 1 Score: 85.5 bits (210), Expect = 6.400e-13
Identity = 122/519 (23.51%), Postives = 191/519 (36.80%), Query Frame = 0
Query:   39 VFFLARKELDFGANHAHTALLLADIDDDGQQELIVGSLDGKLAVYKGLERTEPWALATGLGMLRVFATGRVWPWLKAKRQPPQASAMKFTSTAASTKEEACESEAEDVDVPPREHPSQLIAVTVEGDLYVFDFRNAPHSNLSSPLSTVHSNTVSEQRASQSNMKDNNILQSPSPAQNPPPWKLAPIQTLSVEPNVTAALIVDVDGDGHQELLLGRMDGVVQAFGWRLQPLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYKYPEPELYEKGTGHVSSSVVSLSTVRFKGPEGSALCVVAGLDTGTVEVLRCHWRGNVDDNAPFSSLVDLGV----GGGLPLPHCGWSGPL-----TCCSLGSGGPSGSR-----GGFAVAGLDGRLAMGVVEPPRKRQEQQPPGSDEDLVWRTEWSLQTPQPFYAIAPFNVSRNDFEKSGFAACAWSGFTCLVTAAGTRSSSDGVSPVNIAVFDPSKMFVPPLRGFVAGCFGEHNEPCLLYSCADGHILVFHDLE 544
            V ++ R  LDFG +    A+ L D D+D   EL+VG  +GKL VYK  + ++PW L +  GML     G                             + C  +            + ++AV+ EG  ++FD        L+ PL   H + +                       NP   KLA  Q   +  N    LI D+DGDG  EL++G  D VV+AF W   P                                            +G+  +S  +V   +V   G +GS   +V+    G   VL C+W+    +  P +   D       G    + H   SG +     +   +G+ G   S+     G FA+  LDG L +               G+D+ L     WS+Q     +A+   +V+ N +E+    ACAW G T ++    T           +A F   +       GF + C G++N PCL+Y   +  I ++ D++
Sbjct:    4 VSYVRRVALDFGGSLFPRAVSLGDADNDALNELVVGDTNGKLFVYKN-DESQPWTLRSCQGMLTCVGVG-----------------------------DVCNKK-----------KNLVVAVSAEGWFHLFD--------LTPPLK--HGDVLGHHE-----------------LLNPDDPKLAFKQ--HIPANTKVMLIDDIDGDGRNELVIGYTDRVVRAFRWEDSP--------------------------------------------EGSDSLSGQLVDSLSVN-SGADGSPQMMVSQPGCG-YAVLLCNWK---QEQQPPTETGDGSASSREGPVRDVVHHQTSGRIHNKNVSTHLIGTIGRGSSKEHKGLGLFALCTLDGTLKL-------------MEGADKLL-----WSVQVDHQLFALEKLDVTGNGYEE--VIACAWDGQTYIIDHNRT-----------VARFQVDENVSAFCAGFYS-CKGDYNSPCLVYVSFNQKIYIYWDIQ 371          
BLAST of NO05G00610 vs. NCBI_GenBank
Match: XP_013065637.1 (PREDICTED: integrin-alpha FG-GAP repeat-containing protein 2-like [Biomphalaria glabrata] >XP_013065638.1 PREDICTED: integrin-alpha FG-GAP repeat-containing protein 2-like [Biomphalaria glabrata])

HSP 1 Score: 81.3 bits (199), Expect = 1.200e-11
Identity = 62/229 (27.07%), Postives = 98/229 (42.79%), Query Frame = 0
Query:   39 VFFLARKELDFGANHAHTALLLADIDDDGQQELIVGSLDGKLAVYKGLERTEPWALATGLGMLRVFATGRVWPWLKAKRQPPQASAMKFTSTAASTKEEACESEAEDVDVPPREHPSQLIAVTVEGDLYVFDFRNAPHSNLSSPLSTVHSNTVSEQRASQSNMKDNNILQSPSPAQNPPPWKLAPIQTLSVEPNVTAALIVDVDGDGHQELLLGRMDGVVQAFGWRLQP 268
            V F+ R E++F  N     ++LAD+D+D   ELIVG++DG +A++KG E  +PW   T  GML   A G+V                                           + + L+ +T EG  Y++        N++S  S+  +N+V +              +SPS         L P+ T  +  N     + D+D DGH E+++G  D VV+AF W+  P
Sbjct:   13 VSFVERIEVEFHGNIMTQTMVLADVDNDMANELIVGNIDGFVAIFKG-ESAQPWKKTTVNGMLTCLAVGKV----------------------------------------HLSNKNSLVCMTAEGWCYIY--------NINSDSSSQINNSVEDDG------------ESPS---------LKPVFTQELPANAKVMCLADIDSDGHIEMVIGYSDRVVRAFRWKDNP 171          
BLAST of NO05G00610 vs. NCBI_GenBank
Match: XP_013413831.1 (KICSTOR complex protein ITFG2 isoform X1 [Lingula anatina])

HSP 1 Score: 80.5 bits (197), Expect = 2.000e-11
Identity = 64/225 (28.44%), Postives = 95/225 (42.22%), Query Frame = 0
Query:   39 VFFLARKELDFGANHAHTALLLADIDDDGQQELIVGSLDGKLAVYKGLERTEPWALATGLGMLRVFATGRVWPWLKAKRQPPQASAMKFTSTAASTKEEACESEAEDVDVPPREHPSQLIAVTVEGDLYVFDFRNAPHSNLSSPLSTVHSNTVSEQRASQSNMKDNNILQSPSPAQNPPPWKLAPIQTLSVEPNVTAALIVDVDGDGHQELLLGRMDGVVQAFGW 264
            V F+ R E DF  N  + A+ L D+D+D   EL+VG++DG+L+V+KG +  +PWA A+ LG +     G                             + C +             + L++ +  G  Y+FDFR    S  S  L + H+   S   A+ + MK       P   QN P              N    +I DVDGD H EL++G  D +V+ F W
Sbjct:    8 VSFVERVEFDFQGNLFNQAIALGDVDNDQLNELVVGNIDGELSVFKGGDLQKPWARASDLGTITCVGVG-----------------------------DVCNTGR-----------NLLVSHSSAGGFYLFDFRKDKKSQESPVLDSSHN---SSGDATDAEMK-------PCHKQNLP-------------ANSKVMIIADVDGDNHVELVIGYSDRMVRTFRW 169          
BLAST of NO05G00610 vs. NCBI_GenBank
Match: XP_019371583.1 (PREDICTED: integrin-alpha FG-GAP repeat-containing protein 2 isoform X2 [Gavialis gangeticus])

HSP 1 Score: 79.0 bits (193), Expect = 6.000e-11
Identity = 119/531 (22.41%), Postives = 186/531 (35.03%), Query Frame = 0
Query:   39 VFFLARKELDFGANHAHTALLLADIDDDGQQELIVGSLDGKLAVYKGLERTEPWALATGLGMLRVFATGRVWPWLKAKRQPPQASAMKFTSTAASTKEEACESEAEDVDVPPREHPSQLIAVTVEGDLYVFDFRNAPHSNLSSPLSTVHSNTVSEQRASQSNMKDNNILQSPSPAQNPPPWKLAPIQTLSVEPNVTAALIVDVDGDGHQELLLGRMDGVVQAFGWRLQPLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYKYPEPELYEKGTGHVSSSVVSLSTVRFK----------GPEGSALCVVAGLDTGTVEVLRCHWR--------------GNVDDNAPFSSLVDLGVGGGLPLPHCGWSGPLTCCSLGSGGPSGSRGG--FAVAGLDGRLAMGVVEPPRKRQEQQPPGSDEDLVWRTEWSLQTPQPFYAIAPFNVSRNDFEKSGFAACAWSGFTCLVTAAGTRSSSDGVSPVNIAVFDPSKMFVPPLRGFVAGCFGEHNEPCLLYSCADGHILVFHDLE 544
            V ++ R  L+F  +    A+ L D D+D + EL+VG  +GKL VYK  + T+PW + +  GML     G                             + C            +  + ++AV+ EG  ++FD          +PL + HS   S                 P P   PP  +  P+    +  N    LI D+DGDG  EL++G  D VV+AF W                                            E   +G+ H S  +V L     +          GP+G+   +V+    G   VL C W+                 + +AP   ++     G +   H          S+  G P+ S G   FA+  LDG L +               G+D+ L     WS+Q     +A+   +V+ +  E+    ACAW G T ++    T           +A F   +       G  A C G  N PCL+Y   +  I ++ D++
Sbjct:    9 VSYVQRVALEFSGSLFPHAIRLGDADNDTRNELVVGDTNGKLYVYKN-DDTKPWTVRSCQGMLTCVGVG-----------------------------DVC-----------NKGKNLVVAVSAEGWFHLFDL---------TPLPSKHSEASSH----------------PEP---PPSDEQRPVFKQHIPANTKVMLINDIDGDGKCELVVGYTDRVVRAFRW--------------------------------------------EDLSEGSDHHSGQLVLLKKWLLEGQVDSLSVNPGPDGAPEMMVSQPGCG-YAVLLCTWKLEQQQQPAAEGGDNSAANRDAPVRDVILHQTSGRI---HNENVSTHLIGSISRGCPTASSGSGLFALCTLDGTLKL-------------MEGADKLL-----WSVQVDHQLFALEKLDVTGDGHEE--VVACAWDGQTYIIDHNRT-----------VARFQVDENVSAFCAGLYA-CKGGRNSPCLVYVSFNHKIYIYWDVQ 390          
BLAST of NO05G00610 vs. NCBI_GenBank
Match: XP_019399718.1 (PREDICTED: integrin-alpha FG-GAP repeat-containing protein 2 isoform X1 [Crocodylus porosus])

HSP 1 Score: 79.0 bits (193), Expect = 6.000e-11
Identity = 122/550 (22.18%), Postives = 193/550 (35.09%), Query Frame = 0
Query:   39 VFFLARKELDFGANHAHTALLLADIDDDGQQELIVGSLDGKLAVYKGLERTEPWALATGLGMLRVFATGRVWPWLKAKRQPPQASAMKFTSTAASTKEEACESEAEDVDVPPREHPSQLIAVTVEGDLYVFDFRNAPHSNLSSPLSTVHSNTVSEQRASQSNMKDNNILQSPSPAQNPPPWKLAPIQTLSVEPNVTAALIVDVDGDGHQELLLGRMDGVVQAFGWRLQPLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYKYPEPELYEKGTGHVSSSVVSLSTVRFK----------GPEGSALCVVAGLDTGTVEVLRCHWR--------------GNVDDNAPFSSLVDLGVGGGLPLPHCGWSGPLTCCSLGSGGPSGSRGGFAVAGLDGRLAMGVVEPPRKRQEQQPPGSDEDLVWRTEWSLQTPQPFYAIAPFNVSRNDFEKSGFAACAWSGFTCLVTAAGTRSSSDGVSPVNIAVFDPSKMFVPPLRGFVAGCFGEHNEPCLLYSCADGHILVFHD--LER----QLQQFREVSPDTED 559
            V ++ R  L+F  +    A+ L D D+D + EL+VG  +GKL VYK  + T+PW + +  GML     G                             + C            +  + ++AV+ EG  ++FD          +PL + HS   S      S+                   +  P+    +  N    LI D+DGDG  EL++G  D VV+AF W                                            E   +G+ H+S  +V L     +          GP+G+   +V+    G   VL C W+                 + +AP   ++     G +   +   +  +   S G    SG  G FA+  LDG L +               G+D     R  WS+Q     +A+   +V+ +  E+    ACAW G T ++    T           +A F   +       G  A C G  N PCL+Y   +  I ++ D  LER     L +  + +P+ ED
Sbjct:    9 VSYVQRVALEFSGSLFPHAIRLGDADNDKRNELVVGDTNGKLYVYKN-DDTKPWTVRSCQGMLTCVGVG-----------------------------DVC-----------NKGKNLVVAVSAEGWFHLFDL---------TPLPSKHSEASSHHEXXXSD-------------------EQRPVFKQHIPANTKVMLINDIDGDGKCELVVGYTDRVVRAFRW--------------------------------------------EDLSEGSDHLSGQLVLLKKWLLEGQVDSLSVNPGPDGTPEMMVSQPGCG-YAVLLCTWKLEQQQQPAAEGGDNSAANRDAPLRDVILHQTSGRIHNENVS-THLIGSISRGCPIASGGSGLFALCTLDGTLKL-------------MEGAD-----RLLWSVQVDHQLFALEKLDVTGDGHEE--VVACAWDGQTYIIDHNRT-----------VARFQVDENVSAFCAGLYA-CKGGRNSPCLVYVSFNQKIYIYWDVQLERMESTNLLKILKANPEFED 411          
BLAST of NO05G00610 vs. NCBI_GenBank
Match: XP_014795601.1 (PREDICTED: integrin-alpha FG-GAP repeat-containing protein 2 [Calidris pugnax])

HSP 1 Score: 78.6 bits (192), Expect = 7.800e-11
Identity = 126/544 (23.16%), Postives = 193/544 (35.48%), Query Frame = 0
Query:   47 LDFGANHAHTALLLADIDDDGQQELIVGSLDGKLAVYKGLERTEPWALATGLGMLRVFATGRVWPWLKAKRQPPQASAMKFTSTAASTKEEACESEAEDVDVPPREHPSQLIAVTVEGDLYVFDFRNAPHSNLSSPLSTVHSNTVSEQRASQSNMKDNNILQSPSPAQNPPPWKLAPIQTLSVEPNVTAALIVDVDGDGHQELLLGRMDGVVQAFGWRLQPLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYKYPEPELYEKGTGHVSSSVVSLSTVRFKGPEGSALCVVAGLDTGTVEVLRCHWRGNV-------DDNAPFSSL----VDLGVGGGL-----PLPHCGWSGPLTCCSLGSGGPSGSRGGFAVAGLDGRLAMGVVEPPRKRQEQQPPGSDEDLVWRTEWSLQTPQPFYAIAPFNVSRNDFEKSGFAACAWSGFTCLVTAAGTRSSSDGVSPVNIAVFDPSKMFVPPLRGFVAGCFGEHNEPCLLYSCADGHILVFHDLERQLQQFREVSP--DTEDETAGAVRQLRSEEA 573
            LDFG +    A+ L D D+DG  EL+VG  +GKL VYK  + ++PWA+ +  GML     G                             + C            +  + ++AV+ EG  ++FD  + P  +  +  S  H    +E++                           P+    +  N    LI D+DGDG  EL++G  D VV+AF W                                        +   +L       +   V SLS     GP+GS   +V+    G   +L C W           D++AP S +    V L    G         H   S    C S GSG      G FA+  LDG L +               G+D+ L     WS+Q     +A+   +V+ N  E+    ACAW G T ++    T           +A F   +       G  A C G  N PCL+Y   +  I ++ D++ +  +   +    D + E    ++QL  E +
Sbjct:   12 LDFGGSLFPHAICLGDADNDGLNELVVGDTNGKLCVYKN-DDSKPWAVRSCQGMLTCVGVG-----------------------------DVC-----------NKGKNLVVAVSAEGWFHLFDLTSPPSKHPDA--SGHHELAAAEEQ--------------------------KPVFKQHIPANTKVMLISDIDGDGKCELVVGYTDRVVRAFRWE---------------------------------DLENSDHVSGQLLLLKKWLLEGQVDSLSV--NPGPDGSPELMVSQPGCG-YAILLCTWDSEQQATTEGRDNSAPSSEVPIRDVILHQTSGRIHNKNVSTHLIGSIGRGCASEGSGS-----GLFALCTLDGTLKL-------------MEGADKLL-----WSVQVDHQLFALEKLDVTGNGHEE--VIACAWDGQTYIIDHDRT-----------VARFQADENVSAFCAGLYA-CKGGSNSPCLVYVSFNQKIYIYWDVQLERMESTNLLKILDCDPEFGNLLQQLGVERS 413          
BLAST of NO05G00610 vs. NCBI_GenBank
Match: XP_015682854.1 (PREDICTED: integrin-alpha FG-GAP repeat-containing protein 2 [Protobothrops mucrosquamatus])

HSP 1 Score: 78.6 bits (192), Expect = 7.800e-11
Identity = 130/568 (22.89%), Postives = 205/568 (36.09%), Query Frame = 0
Query:   39 VFFLARKELDFGANHAHTALLLADIDDDGQQELIVGSLDGKLAVYKGLERTEPWALATGLGMLRVFATGRVWPWLKAKRQPPQASAMKFTSTAASTKEEACESEAEDVDVPPREHPSQLIAVTVEGDLYVFDFRNAPHSNLSSPLSTVHSNTVSEQRASQSNMKDNNILQSPSPAQNPPPWKLAPIQTLSVEPNVTAALIVDVDGDGHQELLLGRMDGVVQAFGWRLQPLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYKYPEPELYEKGTGHVSSSVVSLSTVRFKG----------PEGSALCVVAGLDTGTVEVLRCHWR-----------GNVDDNAPFSSLVDLGVGGGLPLPHCGWSGPLTCCSLGSG---GPSGSRGGFAVAGLDGRLAMGVVEPPRKRQEQQPPGSDEDLVWRTEWSLQTPQPFYAIAPFNVSRNDFEKSGFAACAWSGFTCLVTAAGTRSSSDGVSPVNIAVFDPSKMFVPPLRGFVAGCFGEHNEPCLLYSCADGHILVFHDLERQLQQFREVSPDTEDETAGAVRQLRSEEAQRLVKAWVDL 583
            V ++ R  LDFG +    A+ L D D+D   EL+VG  +GKL VYK  + ++PW + +  GML     G                             + C  +            + ++AV+ EG  ++FD   +P  +  +P                     + +L S  P       KLA  Q   +  N    LI D+DGDG  EL++G  D VV+AF W                                            E   +G  H+S  +V L     +G           +GS   +V+    G   VL C WR           G+  +    SS+ D+ +       H          ++G G    P G  G FA+  LDG L +               G+D+ L     WS+Q     +A+   +V+ N +E+    ACAW G T ++    T           +A F   +       GF + C G HN PCL+Y   +  I ++ D++ +  +   +    ++ + G    L+ + A+  V A  DL
Sbjct:    4 VSYVRRVALDFGGSLFPRAVSLGDADNDALNELVVGDTNGKLFVYKN-DDSQPWTVRSCQGMLTCVGVG-----------------------------DICNKK-----------KNLVVAVSAEGWFHLFDV-TSPSKHGDAP-------------------GHHELLTSDDP-------KLAFKQ--HIPANTKVMLINDIDGDGKNELVIGYTDRVVRAFRW--------------------------------------------EDSSEGPDHISGQLVLLKKWLLEGQVDSLSVNPDADGSPKMMVSQPGCG-YAVLLCTWRQEPQPPPEASDGSASNRE--SSIRDVILHQTSGRIHNKNVSTHLIGTIGRGRSKEPKG-LGLFALCTLDGTLKL-------------MEGADKLL-----WSVQVDHQLFALEKLDVTGNGYEE--VIACAWDGQTYIIDHNRT-----------VARFQVDENVSAFCAGFYS-CKGGHNSPCLVYVSFNQKIYIYWDIQLERMESTNLMKMLQNHSEGRELLLQLDVAKDDVSAVRDL 421          
BLAST of NO05G00610 vs. NCBI_GenBank
Match: OPJ69274.1 (integrin-alpha FG-GAP repeat-containing protein 2 [Patagioenas fasciata monilis])

HSP 1 Score: 78.6 bits (192), Expect = 7.800e-11
Identity = 124/547 (22.67%), Postives = 193/547 (35.28%), Query Frame = 0
Query:   47 LDFGANHAHTALLLADIDDDGQQELIVGSLDGKLAVYKGLERTEPWALATGLGMLRVFATGRVWPWLKAKRQPPQASAMKFTSTAASTKEEACESEAEDVDVPPREHPSQLIAVTVEGDLYVFDFRNAPHSNLSSPLSTVHSNTVSEQRASQSNMKDNNILQSPSPAQNPPPWKLAPIQTLSVEPNVTAALIVDVDGDGHQELLLGRMDGVVQAFGWRLQPLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYKYPEPELYEKGTGHVSSSVVSLSTVRFKG----------PEGSALCVVAGLDTGTVEVLRCHWRGNV-------DDNAPFSS--LVDLGVGGGLPLPHCGWSGPLTCCSLGSGGPSGSRGG--FAVAGLDGRLAMGVVEPPRKRQEQQPPGSDEDLVWRTEWSLQTPQPFYAIAPFNVSRNDFEKSGFAACAWSGFTCLVTAAGTRSSSDGVSPVNIAVFDPSKMFVPPLRGFVAGCFGEHNEPCLLYSCADGHILVFHDLERQLQQFREVSP--DTEDETAGAVRQLRSE 571
            LDF  +    A+ L D D+D   EL+VG  +GKL VYK  + ++PWA+ +  GML     G                             + C            +  + ++AV+ EG  ++FD        L+SP S     +   + A+    K                    P+    +  N    LI D+DGDG  EL++G  D VV+AF W                                            E + + + HVS  +V L     +G          P+GS   +V+    G   +L C W           D +AP S   + D+ +       H          S+G G  S + G   FA+  LDG L +               G+D     R  WS+Q     +A+   +V+ N  E+    ACAW G T ++  + T           +A F   +       G  A C GE N PCL+Y   +  I ++ D++ +  +   +    D + E    ++QL  E
Sbjct:   12 LDFAGSLFPHAICLGDADNDALNELVVGDTNGKLFVYKN-DDSKPWAVRSCQGMLTCVGVG-----------------------------DVC-----------NKGKNLVVAVSAEGWFHLFD--------LTSPTSKHPDASGHHELATAEEQK--------------------PVFKQHIPANTKVMLISDIDGDGKCELVVGYTDRVVRAFRW--------------------------------------------EDFLENSDHVSGQLVLLKKWLLEGQVDSLSVNPRPDGSPEMMVSQPGCG-YAILLCTWDSEQQAMTEGRDSSAPSSEAPIRDVILHQTSGRIHNKNVSTHLIGSIGRGCSSENSGSGLFALCTLDGTLKL-------------MEGAD-----RLLWSVQVDHQLFALEKLDVTGNGHEE--VIACAWDGQTYIIDHSRT-----------VARFQADENVSAFCAGLYA-CKGERNSPCLVYVSFNQKIYIYWDVQLERMESTNLLKILDCDPEFGSLLQQLSVE 412          
BLAST of NO05G00610 vs. NCBI_GenBank
Match: XP_005509837.1 (integrin-alpha FG-GAP repeat-containing protein 2 isoform X1 [Columba livia] >PKK22323.1 integrin alpha FG-GAP repeat containing 2 [Columba livia])

HSP 1 Score: 77.8 bits (190), Expect = 1.300e-10
Identity = 124/547 (22.67%), Postives = 193/547 (35.28%), Query Frame = 0
Query:   47 LDFGANHAHTALLLADIDDDGQQELIVGSLDGKLAVYKGLERTEPWALATGLGMLRVFATGRVWPWLKAKRQPPQASAMKFTSTAASTKEEACESEAEDVDVPPREHPSQLIAVTVEGDLYVFDFRNAPHSNLSSPLSTVHSNTVSEQRASQSNMKDNNILQSPSPAQNPPPWKLAPIQTLSVEPNVTAALIVDVDGDGHQELLLGRMDGVVQAFGWRLQPLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYKYPEPELYEKGTGHVSSSVVSLSTVRFKG----------PEGSALCVVAGLDTGTVEVLRCHWRGNV-------DDNAPFSS--LVDLGVGGGLPLPHCGWSGPLTCCSLGSGGPSGSRGG--FAVAGLDGRLAMGVVEPPRKRQEQQPPGSDEDLVWRTEWSLQTPQPFYAIAPFNVSRNDFEKSGFAACAWSGFTCLVTAAGTRSSSDGVSPVNIAVFDPSKMFVPPLRGFVAGCFGEHNEPCLLYSCADGHILVFHDLERQLQQFREVSP--DTEDETAGAVRQLRSE 571
            LDF  +    A+ L D D+D   EL+VG  +GKL VYK  + ++PWA+ +  GML     G                             + C            +  + ++AV+ EG  ++FD        L+SP S     +   + A+    K                    P+    +  N    LI D+DGDG  EL++G  D VV+AF W                                            E + + + HVS  +V L     +G          P+GS   +V+    G   +L C W           D +AP S   + D+ +       H          S+G G  S + G   FA+  LDG L +               G+D     R  WS+Q     +A+   +V+ N  E+    ACAW G T ++  + T           +A F   +       G  A C GE N PCL+Y   +  I ++ D++ +  +   +    D + E    ++QL  E
Sbjct:   12 LDFAGSLFPHAICLGDADNDALNELVVGDTNGKLYVYKN-DDSKPWAVQSCQGMLTCVGVG-----------------------------DVC-----------NKGKNLVVAVSAEGWFHLFD--------LTSPTSKHPDASGHHELATAEEQK--------------------PVFKQHIPANTKVMLISDIDGDGKCELVVGYTDRVVRAFRW--------------------------------------------EDFLENSDHVSGQLVLLKKWLLEGQVDSLSVNPRPDGSPEMMVSQPGCG-YAILLCTWDSEQQAMTDGRDSSAPGSEAPVRDVILHQTSGRIHNKNVSTHLIGSIGRGCSSENSGSGLFALCTLDGTLKL-------------MEGAD-----RLLWSVQVDHQLFALEKLDVTGNGHEE--VIACAWDGQTYIIDHSRT-----------VARFQADENVSAFCAGLYA-CKGERNSPCLVYVSFNQKIYIYWDVQLERMESTNLLKILDCDPEFGSLLQQLSVE 412          
The following BLAST results are available for this feature:
BLAST of NO05G00610 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM28335.14.000e-10841.63hypothetical protein Naga_100109g4 [Nannochloropsi... [more]
ETE59331.16.400e-1323.51Integrin-alpha FG-GAP repeat-containing protein 2,... [more]
XP_013065637.11.200e-1127.07PREDICTED: integrin-alpha FG-GAP repeat-containing... [more]
XP_013413831.12.000e-1128.44KICSTOR complex protein ITFG2 isoform X1 [Lingula ... [more]
XP_019371583.16.000e-1122.41PREDICTED: integrin-alpha FG-GAP repeat-containing... [more]
XP_019399718.16.000e-1122.18PREDICTED: integrin-alpha FG-GAP repeat-containing... [more]
XP_014795601.17.800e-1123.16PREDICTED: integrin-alpha FG-GAP repeat-containing... [more]
XP_015682854.17.800e-1122.89PREDICTED: integrin-alpha FG-GAP repeat-containing... [more]
OPJ69274.17.800e-1122.67integrin-alpha FG-GAP repeat-containing protein 2 ... [more]
XP_005509837.11.300e-1022.67integrin-alpha FG-GAP repeat-containing protein 2 ... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL087nonsL087Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL086nonsL086Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR092ncniR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR119ngnoR119Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR118ngnoR118Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003820NSK003820Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G00610.1NO05G00610.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|583569gene_2854Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100109g4gene2254Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G00610.1NO05G00610.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G00610 ID=NO05G00610|Name=NO05G00610|organism=Nannochloropsis oceanica|type=gene|length=1869bp
ATGATTAAGCCGAAGAATAATGACGAGATGAGTGCCGGGTCAAGTGCATC
CGAAATGTCATCTGTGCCTCCAGAGGCTGCCCCGACAATCAGCAGCGCCG
ATATTGGGGAGGAGGTTTTCTTCTTGGCGCGCAAGGAGCTGGATTTTGGG
GCCAACCATGCCCACACTGCCTTGCTTCTGGCAGATATTGACGATGACGG
GCAGCAGGAACTCATTGTGGGGTCGTTAGATGGCAAGTTGGCGGTGTATA
AGGGACTAGAGAGAACTGAGCCCTGGGCGCTGGCCACGGGACTGGGCATG
CTCAGGGTCTTCGCAACAGGCCGCGTTTGGCCGTGGTTGAAGGCCAAAAG
ACAACCACCGCAAGCATCAGCTATGAAATTTACGTCCACGGCAGCTTCGA
CCAAGGAGGAGGCGTGCGAATCGGAGGCAGAGGATGTGGATGTGCCCCCA
CGGGAGCATCCCTCACAACTTATTGCCGTGACGGTGGAAGGAGACCTGTA
TGTGTTTGACTTCCGCAATGCTCCACATTCGAACCTGTCGTCACCGTTGT
CCACTGTGCACTCAAATACAGTGTCCGAACAGCGTGCGTCACAATCAAAC
ATGAAGGATAACAATATTTTGCAATCTCCTTCACCGGCGCAAAATCCGCC
TCCCTGGAAGCTAGCCCCAATTCAGACGCTTTCCGTCGAGCCCAACGTAA
CGGCAGCATTAATTGTGGACGTGGATGGTGATGGTCATCAAGAATTGCTG
TTAGGGCGGATGGACGGCGTGGTTCAAGCCTTTGGCTGGCGGCTCCAGCC
TCTGCCGCCATCGCCCGGGGGCGCCGAGCAGGATGAAGAGGAGGAGGACG
ACGATAATAAAGAAGAAGAGAATGATAATGAGGAGGACGAATACCAGCAG
AACTACAAATATCCAGAGCCGGAGCTATATGAGAAGGGCACTGGCCATGT
GTCCTCATCCGTCGTGTCCTTGTCGACCGTGCGTTTCAAGGGACCGGAAG
GCAGCGCTCTATGTGTGGTGGCAGGTCTGGATACAGGCACCGTCGAAGTG
CTCCGGTGCCACTGGAGAGGAAATGTCGACGACAACGCTCCATTTTCGTC
CTTGGTAGATTTGGGGGTTGGGGGTGGACTACCATTACCGCACTGCGGTT
GGTCGGGCCCTTTGACTTGTTGCTCCTTGGGAAGTGGTGGGCCTAGTGGT
AGTAGGGGAGGCTTTGCGGTCGCCGGACTTGACGGTCGGTTGGCCATGGG
TGTCGTTGAACCGCCACGTAAGAGGCAGGAGCAGCAGCCCCCTGGGAGCG
ATGAAGATCTGGTATGGAGGACGGAATGGAGTCTCCAGACACCGCAGCCT
TTTTATGCCATCGCGCCTTTCAATGTGAGCCGGAATGATTTTGAGAAATC
CGGGTTTGCAGCGTGTGCGTGGAGCGGCTTCACGTGTTTAGTCACCGCCG
CTGGTACTCGTTCCAGCAGTGACGGGGTGTCGCCAGTAAATATCGCAGTG
TTTGATCCTTCGAAAATGTTTGTCCCACCGTTGCGGGGCTTTGTCGCTGG
GTGTTTCGGCGAGCACAACGAGCCTTGTTTGTTGTATAGCTGCGCGGATG
GGCACATTTTGGTCTTCCACGACCTGGAACGGCAATTGCAGCAGTTTCGG
GAAGTATCGCCGGATACCGAAGACGAGACAGCGGGGGCGGTGAGGCAACT
GCGCTCTGAAGAAGCCCAGAGGCTGGTCAAGGCTTGGGTTGACTTGTACT
TGGAGAGATCCGCGGACGATACGGGCACAGAGACGAAGGGGGATGCCAGT
GCCAAGAACAAGGGGATAAAGTCCGACAAGGGCGCACCTACGGGGGCTGC
TCCTATGAAAGGGAGGTGA
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protein sequence of NO05G00610.1

>NO05G00610.1-protein ID=NO05G00610.1-protein|Name=NO05G00610.1|organism=Nannochloropsis oceanica|type=polypeptide|length=623bp
MIKPKNNDEMSAGSSASEMSSVPPEAAPTISSADIGEEVFFLARKELDFG
ANHAHTALLLADIDDDGQQELIVGSLDGKLAVYKGLERTEPWALATGLGM
LRVFATGRVWPWLKAKRQPPQASAMKFTSTAASTKEEACESEAEDVDVPP
REHPSQLIAVTVEGDLYVFDFRNAPHSNLSSPLSTVHSNTVSEQRASQSN
MKDNNILQSPSPAQNPPPWKLAPIQTLSVEPNVTAALIVDVDGDGHQELL
LGRMDGVVQAFGWRLQPLPPSPGGAEQDEEEEDDDNKEEENDNEEDEYQQ
NYKYPEPELYEKGTGHVSSSVVSLSTVRFKGPEGSALCVVAGLDTGTVEV
LRCHWRGNVDDNAPFSSLVDLGVGGGLPLPHCGWSGPLTCCSLGSGGPSG
SRGGFAVAGLDGRLAMGVVEPPRKRQEQQPPGSDEDLVWRTEWSLQTPQP
FYAIAPFNVSRNDFEKSGFAACAWSGFTCLVTAAGTRSSSDGVSPVNIAV
FDPSKMFVPPLRGFVAGCFGEHNEPCLLYSCADGHILVFHDLERQLQQFR
EVSPDTEDETAGAVRQLRSEEAQRLVKAWVDLYLERSADDTGTETKGDAS
AKNKGIKSDKGAPTGAAPMKGR*
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Synonyms
Publications