NO05G00570, NO05G00570 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO05G00570 vs. NCBI_GenBank
Match: EWM28323.1 (indole-3-glycerol-phosphate synthase [Nannochloropsis gaditana]) HSP 1 Score: 429.5 bits (1103), Expect = 1.000e-116 Identity = 224/339 (66.08%), Postives = 264/339 (77.88%), Query Frame = 0 Query: 56 ASSDANSPTSTFPAPAAGSGMTEVLARKAKEKEVAAFKAALPRAHPIFATLEDL--PPSPSNQSQILYKALQKRHGNTLTVIAEYWRKAPFSFLGSVLEPKAYSEIYRKAGASVIAINVD------------------------------PLTASDVVVDPVQISRAKLAGAAGITLRYSLNPPEATTALIKTTHALGMEPLVFVKSATEAAAATAAGARLLFVYGCTRARGIEMRKELPLLLPDGEEGIMVGFDLRRPREFQYGLNEVEDAWVLRDEGFHSVYASNLLFQTPLDDVVGPSAVIKALRAKACHFMVDPLDWIEKAVTEGTKETLGELLA 363 +SSD S +G+ MT+ LARKAKEKE+AAFKAALPRAHPIF LEDL PPS +N+S LY+ L+ RHGNTLTV+AEYWRKAPF+FLGSVLEPK YSEIYR+AGAS IA+NVD P+ A DVVVDPVQISRAKLAGAAGITLR+SL PPE T +LI+T ALGMEP+VFV+++TEAAAA AGAR++++YGC+RA+ +EMR++L ++G+M+GFDLRRPREFQYGLNEVEDAW+LRD GFHSVY SNLLFQTPLDDV+GPS+VIKALRAKAC F+VDPLDWIEK+V EG+KETLGELLA Sbjct: 86 SSSDLPSSLGETQLGPSGNAMTDTLARKAKEKEIAAFKAALPRAHPIFTMLEDLSFPPSLANRSDALYQNLRHRHGNTLTVVAEYWRKAPFAFLGSVLEPKEYSEIYREAGASAIAVNVDSVGGGCAHEDIAEMVAEQQAAILEDVTAPVPIVAMDVVVDPVQISRAKLAGAAGITLRFSLTPPEVTLSLIQTALALGMEPMVFVRNSTEAAAAVGAGARVVYLYGCSRAQAVEMRQDL------DQDGVMIGFDLRRPREFQYGLNEVEDAWILRDAGFHSVYVSNLLFQTPLDDVLGPSSVIKALRAKACVFLVDPLDWIEKSVMEGSKETLGELLA 418
BLAST of NO05G00570 vs. NCBI_GenBank
Match: EJK59930.1 (hypothetical protein THAOC_19796, partial [Thalassiosira oceanica]) HSP 1 Score: 123.6 bits (309), Expect = 1.200e-24 Identity = 115/385 (29.87%), Postives = 175/385 (45.45%), Query Frame = 0 Query: 11 ALALTFLAACTQAFIRIPSPASGRRAISPPPQPPVLSAPLHTTLFASSDANSPTSTFPAPAAGSGMTEVLARKAKEKEVAAFKAALPRAHPIFATLE----DLPPSPSNQSQILYKALQKRHGNTLTVIAEYWRKAPFS-FLGSVLEPKAYSEIYRKAGASVIAINVD-----------------------------PLTASDVVVDPVQISRAKLAGAAGITLRYSLNPPEATTALIKTTHALGMEPLVFVKSATEAAAATAAGARLLFVYGCTRARGIEMRKELPLLLPDGEEGIMVGFDLRRPREFQYGLNEVEDAWVLRDEGFHSVYASNLLFQTPLDDVVGPSAVIKALRAKACHFMVDPLDWIEKAVTEGTKETLGELL 362 A+ L AAC S A R +SP P + +S+ PT+T A G V RKAKE +V + P + + D + S L L KR G T++V+AEY RK S F+ +L+P+ S ++R+ GA+ +A+ D P+ +SD++VD +QI++A+ AGA +T+ YS+ PE IK AL ME +V V + EA A AGA ++ V G A G + L +P+G + L + + L EVE+AW+ RD GF+ V+ S+ L++ D V P A+I +++AK+ P K EG +E LG++L Sbjct: 7 AVNLAVAAACALTACPAHSFAPVARPLSPSP-----------SSVSSAVVGGPTTTTSLSAIG-----VFVRKAKEADVRKYCEDGPSESVLGLYKQIKAYDGSGDDGDASGELQSILTKRKG-TISVVAEYKRKLEGSGFVTDILQPEILSPVFREFGAAAVAVLADERMGGCTYDDVKAMVEEQEEARGDVPGPLPVISSDLIVDEIQIAQARDAGAVAVTVTYSVVGPEKVEQFIKDARALNMEVIVNVATPEEAQGAVDAGASMVAVVGVDGADG-KFAVIEGLSVPEGRRVCTIANILAKDNK---ALEEVEEAWICRDMGFNCVWISDALYKAGNDPVEHPGAIISSVKAKSSVKFASPKARSGKG--EGAREYLGDIL 368
BLAST of NO05G00570 vs. NCBI_GenBank
Match: XP_002293205.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED89666.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 123.6 bits (309), Expect = 1.200e-24 Identity = 100/338 (29.59%), Postives = 160/338 (47.34%), Query Frame = 0 Query: 61 NSPTSTFPAPAAGSGMTEVLARKAKEKEVAAFKAALPRAHPIFATLEDLPPSPSNQSQ-------ILYKALQKRHGNTLTVIAEYWRKAPFS-FLGSVLEPKAYSEIYRKAGASVIAINVD-----------------------------PLTASDVVVDPVQISRAKLAGAAGITLRYSLNPPEATTALIKTTHALGMEPLVFVKSATEAAAATAAGARLLFVYGCTRARGIEMRKELPLLLPDGEEGIMVGFDLRRPREFQYGLNEVEDAWVLRDEGFHSVYASNLLFQTPLDDVVGPSAVIKALRAKACHFMVDPLDWIEKAVTEGTKETLGELL 362 +SP + PA V RKAKE +V + P + + A L+ + +P + + L KR G T+++IAEY RK S FL +L P+ S ++R+ GA+ +A+ D P+ +SD++VD +QI+RA AGA +T+ + + E + IK LG+E +V V +A EA +A GA ++ V G A + L +P+G + L + + L EVE+AW+ RD GF+ V+ S+ L+++ D V P A+I ++RAK+ P K EG +E LG++L Sbjct: 38 SSPHTASPATTTSLDAIGVFVRKAKEADVRKYCEEGP-SESVLALLKQINDAPDEAADDATTTVGEVQGLLTKRKG-TISIIAEYKRKLEGSGFLSEILPPEILSPVFREFGATAVAVLADERTGGCTYDDIVEMVEEQQEAMGEVPGPLPVISSDLIVDEIQIARAADAGAKAVTVTHGVVGEEKVSQFIKNARVLGLETIVNVGTAEEAQSAVDVGASIISVTGVDGADN-KFAVIESLSVPEGRTVCTIANILAKDNK---ALEEVEEAWICRDRGFNCVWVSDALYKSGNDPVEHPGAIISSMRAKSSVKYASPKARSGKG--EGAREYLGDIL 367
BLAST of NO05G00570 vs. NCBI_GenBank
Match: CBJ28504.1 (Indole-3-glycerol-phosphate synthase [Ectocarpus siliculosus]) HSP 1 Score: 112.1 bits (279), Expect = 3.700e-21 Identity = 95/317 (29.97%), Postives = 144/317 (45.43%), Query Frame = 0 Query: 80 LARKAKEKEVAAFKAALPRAH---PIFATLEDLPP---SPSNQSQILYKALQKRHGNTLTVIAEYWRKAPFSFLGSVLEPKAYSEIYRKAGASVIAINVDPLTAS-----------------------------DVVVDPVQISRAKLAGAAGITLRYSLNPPEATTALIKTTHALGMEPLVFVKSATE-AAAATAAGARLLFVYGCTRARGIEMRKELPLLLPDGEEGIMVGFDLRRPREFQYGLNEVEDAWVLRDEGFHSVYASNLLFQTPLDDVVGPSAVIKALRAKACHFMVDPLDWIEKAVTEGTKETLGEL 361 LARKAKE +V+ L A P+F LE + L L+K G TL+V+AEY + F+ +L P+ + R GA+ IA+ +PLT D+V+ +I+RAK AGAAG+T+ +L PE L + LGME ++ S E A T+ ++ + G +E+R+ +P + + V RR E G++E+ED W LRD G+H+++AS +L++ + A++KA+RAKA K EG KE LG L Sbjct: 7 LARKAKEAQVSKDMEELRSAEPDSPVFQLLEQAEAGKGAGDGPEYPLSDVLRKNKG-TLSVVAEYRKILKSGFIDGILAPELLCPLLRNGGAACIAVATEPLTGGCSDADLKTVVEEQENSRGDFPGPMPVIIRDLVISEFEIARAKAAGAAGVTVVLALVGPERAAELAAFSKKLGMEAVIQATSQEEIEQAVTSEDISIISIVGKMVDEAVELRQYIP------DRVVSVVHVDRRSDE---GMDEIEDCWQLRDAGYHTIWASEVLYKGGMMQAESAEAILKAIRAKASVKYGRARGMSGKG--EGAKEYLGYL 311
BLAST of NO05G00570 vs. NCBI_GenBank
Match: XP_002179550.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC49373.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 106.3 bits (264), Expect = 2.000e-19 Identity = 90/323 (27.86%), Postives = 150/323 (46.44%), Query Frame = 0 Query: 80 LARKAKEKEVAAFKAALPRAHPI---------FATLEDLPPSPSNQSQILYKALQKRHGNTLTVIAEYWRKAPFSFLGSVLE---PKAYSEIYRKAGASVIAINVD-----------------------------PLTASDVVVDPVQISRAKLAGAAGITLRYSLNPPEATTALIKTTHALGMEPLVFVKSATEAAAATAAGARLLFVYGCTRARGIEMRKELPLLLPDGEEGIMVGFDLRRPREFQYGLNEVEDAWVLRDEGFHSVYASNLLFQTPLDDVVGPSAVIKALRAKACHFMVDPLDWIEKAVTEGTKETLGELL 362 L +KAKE+E+ + + H + AT+ D + L ++L +R G T+TVIAEY RK F+ G + E P+ S +R+ GAS IA+ D P+ +D++VD +Q++R+ G A + L E T L+K T A+ +E +V V S EA A +GAR+L + + + L++P+G++ + L + L E+EDAW +RD+GF+SV+ L++ D P +IK++++K+ P + EG +E LG++L Sbjct: 64 LVKKAKEQELRKYIESGVEEHVMEKYNLLKENLATINDETLADQVVGP-LQESLTRRKG-TITVIAEYKRKCGFNPTGLIHEMHVPELLSPSFREYGASAIAVMADPRMGGCDYDDIRHFVEEQRRAKMEVPGPLPVINNDLIVDELQVARSAAYGCAALVLNLPTLGVEQTKVLLKATKAVDLEAIVAVSSKEEAQTAIDSGARMLSILHLGTVEDMVAAVD-GLVIPEGQQVCKIANILANNDQ---QLQEIEDAWSVRDQGFNSVWVGEALYKGGADPNEQPGGIIKSMKSKSSLKFASPK--AARGRGEGAREYLGDIL 378
BLAST of NO05G00570 vs. NCBI_GenBank
Match: GAX24126.1 (indole-3-glycerol phosphate synthase [Fistulifera solaris]) HSP 1 Score: 94.7 bits (234), Expect = 6.100e-16 Identity = 97/364 (26.65%), Postives = 163/364 (44.78%), Query Frame = 0 Query: 49 PLHTTLFASSDAN-----SPTS-----TFPAPAAGSGMTEVLARKAKEKEVAAF-KAALP--------RAHPIFATLEDLPPSPSNQSQILYKALQKRHGNTLTVIAEYWRKAPFSFLG---SVLEPKAYSEIYRKAGASVIAINVDP-----------------------------LTASDVVVDPVQISRAKLAGAAGITLRYSLNPPEATTALIKTTHALGMEPLVFVKSATEAAAATAAGARLLFVYGCTRARGIEMRKELPLLLPDGEEGIMVGFDLRRPREFQYGLNEVEDAWVLRDEGFHSVYASNLLFQTPLDDVVGPSAVIKALRAKACHFMVDPLDWIEKAVTEGTKETLGELL 362 PL +LF+ AN +P+S + P G LA+KAK+ E+ + +A +P + T++ L N+ L + L +R G TLT+IAEY RK F+ G + +P+ S I+R+ AS IA+ D + +D+++D +QI+R GA + L ++ + L+K T A+ +E +V V SA +A A GAR++ V G E R L L E I+ + + L E+EDAW LRD+G++S+ L+++ ++ P +I+++++K+ P EG +E LG++L Sbjct: 7 PLLISLFSLESANGFVGLTPSSQIIKNSISRPVTSLGAIAALAKKAKQNELRHYVEAGVPDSVMKIYQEMQSKYKTIDLLANDLPNK---LQQELTRRRG-TLTIIAEYNRKTRFTDSGIIKDLYDPEIVSPIFREYLASAIAVTADERMGACDYSTLEAFVKEQKRAHMEVPGPIMIINNDLILDELQIARTVHVGADAVVLSAAVLEKDELEKLLKCTAAVDLEAIVAVTSAEQAQQAIDMGARMISVQG---IGDNEERAALLQSLKMPEGRIVTTICNLGAAKGKGDLQEIEDAWFLRDKGYNSIIVGETLYKSGSLEIEHPGVIIRSMKSKSSLKFASPK--ASNGRGEGAREYLGDIL 361
BLAST of NO05G00570 vs. NCBI_GenBank
Match: GAX27057.1 (hypothetical protein FisN_9Lh379 [Fistulifera solaris]) HSP 1 Score: 91.7 bits (226), Expect = 5.200e-15 Identity = 90/337 (26.71%), Postives = 148/337 (43.92%), Query Frame = 0 Query: 70 PAAGSGMTEVLARKAKEKEVAAF-KAALP------------RAHPIFATLEDLPPSPSNQSQILYKALQKRHGNTLTVIAEYWRKAPFSFLG---SVLEPKAYSEIYRKAGASVIAINVDP-----------------------------LTASDVVVDPVQISRAKLAGAAGITLRYSLNPPEATTALIKTTHALGMEPLVFVKSATEAAAATAAGARLLFVYGCTRARGIEMRKELPLLLPDGEEGIMVGFDLRRPREFQYGLNEVEDAWVLRDEGFHSVYASNLLFQTPLDDVVGPSAVIKALRAKACHFMVDPLDWIEKAVTEGTKETLGELL 362 P G LA+KAK+ E+ + +A +P R I DLP L + L +R G TLT+IAEY RK F+ G + +P+ S I+R+ AS IA+ D + +D+++D +QI+R GA + L ++ + L+K A+ +E +V V SA +A A GAR++ V G + E R L L E I+ + + L E+EDAW LRD+G++S+ L+++ ++ P +I+++++K+ P EG +E LG++L Sbjct: 40 PVTSLGAIAALAKKAKQNELRQYVEAGVPDSVMKIYQEMQNRYKNIDLLATDLPNK-------LQQELTRRRG-TLTIIAEYNRKTRFTDSGIIKDLYDPEIVSPIFREYLASAIAVTADERMGACDYSTLEAFVKEQKRAHMEVPGPIMVINNDLILDELQIARTVDVGADAVVLSAAVLEKDELEKLLKCAAAVEVEAIVAVTSAEQAQQAIDMGARMISVQGIS---DNEERAALLQSLKMPEGRIVTTICNLGAAKGKGDLQEIEDAWFLRDKGYNSIIVGETLYKSGSLEIEHPGVIIRSMKSKSSLKFASPK--ASNGRGEGAREYLGDIL 363
BLAST of NO05G00570 vs. NCBI_GenBank
Match: XP_005705693.1 (indole-3-glycerol phosphate synthase [Galdieria sulphuraria] >EME29173.1 indole-3-glycerol phosphate synthase [Galdieria sulphuraria]) HSP 1 Score: 80.5 bits (197), Expect = 1.200e-11 Identity = 88/336 (26.19%), Postives = 145/336 (43.15%), Query Frame = 0 Query: 76 MTEVLARKAKEKEVAAFKAALPRA-HPIFATLEDLPPSPSNQSQILYKALQKRHGNTLTVIAEYWRKAPF-SFLGSVLEPKAYSEIYRKAGASVIAINVD-----------------------------PLTASDVVVDPVQISRAKLAGAAGITLRYSLNPPEATTALIKTTHALGMEPLVFVKSATEAAAATAAGARLLFV-------YGCTRARGIEMRKELPLLLPDGEEGIMVGFDLRRPREFQYGLNEVEDAWVLRDEGFHSVYASNLL-------------FQTPLDDVVGPSAVIKALRAKACHFMVDPLDWIEKAVTEGTKETLGEL 361 + +L RKA E E K A + +PI + L S + + + K+ TL+VIAE RK+P +GS+ +P S IY++ GAS I++ D P+ D ++D VQI+ A AGA+ I L S + T L++ T+ALG+E LV V + E A +GA+++ + + + I++R+ LP E + V + G+++ AW+LRDEGF+++ L +Q P++ G +I+A +K+ + EG KE LG + Sbjct: 86 LQSILKRKAVEVEQLKEKLANESSDNPITSR---LAMEGSFEPKDTFYCALKKPNFTLSVIAEIKRKSPSKGHIGSIRDPAGLSRIYKEGGASAISVLTDLEGFGGTLDDLRKVYKAQQQYRETYPGPAPILRKDFIIDKVQIAEAAEAGASAILLIVSA-LGKRTKELLQATYALGLEALVEVHNEDEVDIALQSGAKIIGINNRNLKNFEVSLEHAIKLRQLLP------PEIVSVA---------ESGISDPAVAWLLRDEGFNAILVGEALVTAAERSEAVGTYYQKPVNQAYG---LIRAFLSKSSRKYANSATAALWGQGEGAKEFLGSI 399
BLAST of NO05G00570 vs. NCBI_GenBank
Match: WP_028052656.1 (indole-3-glycerol phosphate synthase TrpC [Carboxydothermus ferrireducens]) HSP 1 Score: 68.9 bits (167), Expect = 3.600e-8 Identity = 64/228 (28.07%), Postives = 101/228 (44.30%), Query Frame = 0 Query: 113 PSNQSQILYKALQKRHGNTLTVIAEYWRKAPF-SFLGSVLEPKAYSEIYRKAGASVIAINVD--------------------PLTASDVVVDPVQISRAKLAGAAGITLRYSLNPPEATTALIKTTHALGMEPLVFVKSATEAAAATAAGARLLFVYG---CTRARGIEMRKELPLLLPDGEEGIMVGFDLRRPREFQYGLNEVEDAWVLRDEGFHSVYASNLLFQTP 317 P + SQ L L+++ + VIAE + +P L L+P+ +++Y K+GA+ I++ + P+ D ++DP QI AK+ GA + L SL E +IK T LGME LV S E A AGARL+ + T A I++ +L +L E G+++ + G+ ED L G+H + L + P Sbjct: 39 PLSLSQAL---LREKAKGKVGVIAEIKKASPSKGVLREQLDPEEVAQVYAKSGAAAISVLTEEDYFLGSPEYLKAVRAVVSLPILRKDFILDPYQIYEAKVLGADAVLLITSLLAAEELKEMIKITEGLGMEALVEAHSLGEVEKALTAGARLIGINNRDLRTFATNIDVSLKLAPVLK--EAGVVM--------VSESGIRSKEDIKALMTAGYHGILIGEALVRAP 253
BLAST of NO05G00570 vs. NCBI_GenBank
Match: WP_011984694.1 (indole-3-glycerol phosphate synthase TrpC [Anaeromyxobacter sp. Fw109-5] >ABS24588.1 Indole-3-glycerol-phosphate synthase [Anaeromyxobacter sp. Fw109-5]) HSP 1 Score: 68.2 bits (165), Expect = 6.100e-8 Identity = 83/278 (29.86%), Postives = 117/278 (42.09%), Query Frame = 0 Query: 79 VLARKAKEKEVAAFKAALPRAHPIFATLEDLPPSPSNQSQILYKALQKRHGNTLTVIAEYWRKAPFS-FLGSVLEPKAYSEIYRKAGASVIAINVD--------------------PLTASDVVVDPVQISRAKLAGAAGITLRYSLNPPEATTALIKTTHALGMEPLVFVKSATEAAAATAAGARLLFVYG---CTRARGIEMRKELPLLLPDGEEGIMVGFDLRRPREFQYGLNEVEDAWVLRDEGFHSVYASNLLFQTPLDDVVGPSAVIKALRA 333 +LAR K +EVAA +AA P + A PP ++A G +IAE R +P + + + L+ A + Y AGA+ I++ D PL D VVD Q+ A+ AGA L + +A AL+ ALG+ LV V A EA A AAGAR++ V T A + + + LPDG G+ + G+ EDA LR G A+NLL L P A+I+ + A Sbjct: 7 ILAR--KREEVAARRAAEPDGE-LEARARAAPPPRG------FEAALSLPGGPARIIAEVKRASPSAGAIAAGLDAPAQARRYAAAGAAAISVLTDGPGFGGSLADLAAVRAAVGVPLLRKDFVVDRYQLLEARAAGADAALLIVAALGDDALRALLDDCSALGLAALVEVHDAAEADRALAAGARIVGVNNRDLHTFAVDLATSERILPRLPDGVRGVA-----------ESGVRSPEDARRLRRAG-----AANLLVGEALVRAADPGALIREMTA 259 The following BLAST results are available for this feature:
BLAST of NO05G00570 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 14
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO05G00570 ID=NO05G00570|Name=NO05G00570|organism=Nannochloropsis oceanica|type=gene|length=1500bpback to top protein sequence of NO05G00570.1 >NO05G00570.1-protein ID=NO05G00570.1-protein|Name=NO05G00570.1|organism=Nannochloropsis oceanica|type=polypeptide|length=363bpback to top Synonyms
Publications
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