NO05G00560, NO05G00560 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO05G00560 vs. NCBI_GenBank
Match: EWM28332.1 (MtN3-like protein [Nannochloropsis gaditana]) HSP 1 Score: 301.2 bits (770), Expect = 3.000e-78 Identity = 157/253 (62.06%), Postives = 184/253 (72.73%), Query Frame = 0 Query: 1 MGGLATLQTLATLTAVTLNVCPIFDEIPAIKRSRTTGDRSPLLFVAIWSNACLWIFYGIHTHAVHPIATTNITGFLSGSYFLSVFHSYAPPLAKVRLARAFTLAASLITLIGVYAFIFPSSSPSKTQHKLGAMCCLVTISVYAAPLSSVARALQLQSSKPISLFFALVGTLNAVLWSGYGLLTNDAWVYAPSVIGTILSVSQAAVFFWFEVVM--KRGGKXXXXXXXAGKRPTLSEYLMLGTEXXXXXXAAAL 252 MG L LQT A+LTAV LN+CPIFDEIPAIKRSR+TGDRSPLLFVAIW+NACLW+FYG+ A+HPIATTN TGFLSGSYFL F++YA P+AK R A+ F LA S + Y F FPS S+TQ LGA+C LVTI+VYAAPLS+V RAL+L+S KPISLFFALVGTLN+VLW YG+LT DAWVY PSV+G + ++QAAVFFWF V GGK GK L ++L L + AA L Sbjct: 1 MGSLGILQTSASLTAVILNICPIFDEIPAIKRSRSTGDRSPLLFVAIWTNACLWMFYGVFIEAIHPIATTNFTGFLSGSYFLLTFYAYASPVAKTRFAQYFVLALSFVLSTATYCFFFPSPDTSRTQAHLGALCTLVTIAVYAAPLSTVLRALRLRSPKPISLFFALVGTLNSVLWGAYGILTADAWVYIPSVLGVFMCLTQAAVFFWFAVGRGGLEGGKESRGEGFGGK--ALFDFLSLQGDGGKEMQAALL 251
BLAST of NO05G00560 vs. NCBI_GenBank
Match: EWM28333.1 (MtN3-like protein [Nannochloropsis gaditana]) HSP 1 Score: 261.9 bits (668), Expect = 2.000e-66 Identity = 137/231 (59.31%), Postives = 163/231 (70.56%), Query Frame = 0 Query: 23 IFDEIPAIKRSRTTGDRSPLLFVAIWSNACLWIFYGIHTHAVHPIATTNITGFLSGSYFLSVFHSYAPPLAKVRLARAFTLAASLITLIGVYAFIFPSSSPSKTQHKLGAMCCLVTISVYAAPLSSVARALQLQSSKPISLFFALVGTLNAVLWSGYGLLTNDAWVYAPSVIGTILSVSQAAVFFWFEVVM--KRGGKXXXXXXXAGKRPTLSEYLMLGTEXXXXXXAAAL 252 +F AIKRSR+TGDRSPLLFVAIW+NACLW+FYG+ A+HPIATTN TGFLSGSYFL F++YA P+AK R A+ F LA S + Y F FPS S+TQ LGA+C LVTI+VYAAPLS+V RAL+L+S KPISLFFALVGTLN+VLW YG+LT DAWVY PSV+G + ++QAAVFFWF V GGK GK L ++L L + AA L Sbjct: 21 LFYSPTAIKRSRSTGDRSPLLFVAIWTNACLWMFYGVFIEAIHPIATTNFTGFLSGSYFLLTFYAYASPVAKTRFAQYFVLALSFVLSTATYCFFFPSPDTSRTQAHLGALCTLVTIAVYAAPLSTVLRALRLRSPKPISLFFALVGTLNSVLWGAYGILTADAWVYIPSVLGVFMCLTQAAVFFWFAVGRGGLEGGKESRGEGFGGK--ALFDFLSLQGDGGKEMQAALL 249
BLAST of NO05G00560 vs. NCBI_GenBank
Match: ETI38838.1 (hypothetical protein F443_15505 [Phytophthora parasitica P1569] >ETM38874.1 hypothetical protein L914_14919 [Phytophthora parasitica] >ETO67574.1 hypothetical protein F444_15511 [Phytophthora parasitica P1976]) HSP 1 Score: 105.9 bits (263), Expect = 1.800e-19 Identity = 65/210 (30.95%), Postives = 111/210 (52.86%), Query Frame = 0 Query: 4 LATLQTLATLTAVTLNVCPIFDEIPAIKRSRTTGDRSPLLFVAIWSNACLWIFYGIHTHAVHPIATTNITGFLSGSYFLSVFHSYAPPLAKVRLARAFTLAASLITLIGVYAFI----FPSSSPSKTQHKLGAMCCLVTISVYAAPLSSVARALQLQSSKPISLFFALVGTLNAVLWSGYGLLTNDAWVYAPSVIGTILSVSQAAVFFWF 210 L +L+ L T ++V LNV P + E I R RT G + L V ++ N+ LW YG + P+ T G + + F+++++ ++P VR R A S++TL Y + F + S + LG MC V I +YA+PL ++ R +Q +S+ + + V +N +LW +G+ D +V P+ IG++LS +Q A++F + Sbjct: 5 LESLRVLTTCSSVMLNVSP-WPEFARINRQRTPGPLTVLPVVMLFCNSFLWTMYGFMVGQLFPLFATCSMGQCTCAGFIAIYYRWSPDRPAVR--RLIAKAGSVMTLCMAYVILGAHGFTNQSREQVIGTLGLMCISVNICLYASPLDTMKRVVQTKSAASLPISLCTVNLINGLLWVAFGITEGDYFVLTPNAIGSVLSAAQVALYFTY 211
BLAST of NO05G00560 vs. NCBI_GenBank
Match: ETK79035.1 (hypothetical protein L915_15068 [Phytophthora parasitica] >ETL32464.1 hypothetical protein L916_14964 [Phytophthora parasitica] >ETL85721.1 hypothetical protein L917_14783 [Phytophthora parasitica] >ETP08730.1 hypothetical protein F441_15333 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 105.9 bits (263), Expect = 1.800e-19 Identity = 65/210 (30.95%), Postives = 111/210 (52.86%), Query Frame = 0 Query: 4 LATLQTLATLTAVTLNVCPIFDEIPAIKRSRTTGDRSPLLFVAIWSNACLWIFYGIHTHAVHPIATTNITGFLSGSYFLSVFHSYAPPLAKVRLARAFTLAASLITLIGVYAFI----FPSSSPSKTQHKLGAMCCLVTISVYAAPLSSVARALQLQSSKPISLFFALVGTLNAVLWSGYGLLTNDAWVYAPSVIGTILSVSQAAVFFWF 210 L +L+ L T ++V LNV P + E I R RT G + L V ++ N+ LW YG + P+ T G + + F+++++ ++P VR R A S++TL Y + F + S + LG MC V I +YA+PL ++ R +Q +S+ + + V +N +LW +G+ D +V P+ IG++LS +Q A++F + Sbjct: 5 LESLRVLTTCSSVMLNVSP-WPEFARINRQRTPGPLTVLPVVMLFCNSFLWTMYGFMVGQLFPLFATCSMGQCTCAGFIAIYYRWSPDRPAVR--RLIAKAGSVMTLCMAYVILGAHGFTNQSREQVIGTLGLMCISVNICLYASPLDTMKRVVQTKSAASLPISLCTVNLINGLLWVAFGITEGDYFVLTPNAIGSVLSAAQVALYFTY 211
BLAST of NO05G00560 vs. NCBI_GenBank
Match: POM77841.1 (MtN3-like protein, partial [Phytophthora palmivora var. palmivora]) HSP 1 Score: 104.4 bits (259), Expect = 5.400e-19 Identity = 64/208 (30.77%), Postives = 112/208 (53.85%), Query Frame = 0 Query: 4 LATLQTLATLTAVTLNVCPIFDEIPAIKRSRTTGDRSPLLFVAIWSNACLWIFYGIHTHAVHPIATTNITGFLSGSYFLSVFHSYAPPLAKVR--LARAFTLAASLITLIGVYAFIFPSSSPSKTQHKLGAMCCLVTISVYAAPLSSVARALQLQSSKPISLFFALVGTLNAVLWSGYGLLTNDAWVYAPSVIGTILSVSQAAVFFWF 210 L +L+ L T ++V LNV P + E I R RT G + L V ++ N+ LW YG + P+ T G + + F++V++ ++P VR +A+A ++ A +T + + A F + + + L MC V I +YA+PL ++ R +Q +S+ + + V +N LW +G++ D +V P+ IG++LS +Q +FF F Sbjct: 5 LESLRVLTTCSSVLLNVSP-WPEFARINRQRTPGPLTVLPVVMLFCNSFLWTMYGFMVGQLFPLFATCSMGQCTCAGFIAVYYRWSPDRPAVRRLVAKAGSVMALCMTYVILGAHGFTNQTREQVTTTLALMCISVNICLYASPLDTMKRVVQTKSAASLPISLCTVNLINGSLWVAFGIIEGDYFVLTPNAIGSVLSAAQVTLFFMF 211
BLAST of NO05G00560 vs. NCBI_GenBank
Match: XP_008895065.1 (hypothetical protein PPTG_04568 [Phytophthora parasitica INRA-310] >ETN19187.1 hypothetical protein PPTG_04568 [Phytophthora parasitica INRA-310] >ETP36770.1 hypothetical protein F442_15361 [Phytophthora parasitica P10297]) HSP 1 Score: 104.0 bits (258), Expect = 7.000e-19 Identity = 63/208 (30.29%), Postives = 113/208 (54.33%), Query Frame = 0 Query: 4 LATLQTLATLTAVTLNVCPIFDEIPAIKRSRTTGDRSPLLFVAIWSNACLWIFYGIHTHAVHPIATTNITGFLSGSYFLSVFHSYAPPLAKVR--LARAFTLAASLITLIGVYAFIFPSSSPSKTQHKLGAMCCLVTISVYAAPLSSVARALQLQSSKPISLFFALVGTLNAVLWSGYGLLTNDAWVYAPSVIGTILSVSQAAVFFWF 210 L +L+ L T ++V LNV P + E I R RT G + L V ++ N+ LW YG + P+ T G + + F+++++ ++P VR +A+A ++ A + + + A F + S + LG MC V I +YA+PL ++ R +Q +S+ + + V +N +LW +G+ D +V P+ IG++LS +Q A++F + Sbjct: 5 LESLRVLTTCSSVMLNVSP-WPEFARINRQRTPGPLTVLPVVMLFCNSFLWTMYGFMVGQLFPLFATCSMGQCTCAGFIAIYYRWSPDRPAVRRLIAKAGSVMALCMAYVILGAHGFTNQSREQVIGTLGLMCISVNICLYASPLDTMKRVVQTKSAASLPISLCTVNLINGLLWVAFGITEGDYFVLTPNAIGSVLSAAQVALYFTY 211
BLAST of NO05G00560 vs. NCBI_GenBank
Match: XP_009520051.1 (hypothetical protein PHYSODRAFT_483511 [Phytophthora sojae] >EGZ24763.1 hypothetical protein PHYSODRAFT_483511 [Phytophthora sojae]) HSP 1 Score: 102.4 bits (254), Expect = 2.000e-18 Identity = 64/208 (30.77%), Postives = 110/208 (52.88%), Query Frame = 0 Query: 4 LATLQTLATLTAVTLNVCPIFDEIPAIKRSRTTGDRSPLLFVAIWSNACLWIFYGIHTHAVHPIATTNITGFLSGSYFLSVFHSYAPPLAKVR--LARAFTLAASLITLIGVYAFIFPSSSPSKTQHKLGAMCCLVTISVYAAPLSSVARALQLQSSKPISLFFALVGTLNAVLWSGYGLLTNDAWVYAPSVIGTILSVSQAAVFFWF 210 L TL+ L T ++V LNV P + E I R RT G + L V ++ N+ LW YG + P+ T G + + F++V++ ++P VR LA+A ++ A + + A + S + L MC V I +YA+PL ++ R ++ +S+ + + V LN +LW +G+ D +V P+ IG++LS +Q A++F + Sbjct: 5 LETLRVLTTCSSVLLNVSP-WPEFARINRQRTPGPLTVLPVVMLYCNSFLWTIYGFMVGQLFPLFATCSLGQCTCAGFIAVYYRWSPDRPAVRRLLAKAASVMALCFAYVVLGAHGLTNQSREQVITTLALMCISVNICLYASPLDTMKRVVRTKSAASLPISLCTVNLLNGLLWVAFGITEGDYYVLTPNAIGSVLSAAQVALYFTY 211
BLAST of NO05G00560 vs. NCBI_GenBank
Match: XP_002905681.1 (MtN3-like protein [Phytophthora infestans T30-4] >EEY68522.1 MtN3-like protein [Phytophthora infestans T30-4]) HSP 1 Score: 102.1 bits (253), Expect = 2.700e-18 Identity = 63/208 (30.29%), Postives = 114/208 (54.81%), Query Frame = 0 Query: 4 LATLQTLATLTAVTLNVCPIFDEIPAIKRSRTTGDRSPLLFVAIWSNACLWIFYGIHTHAVHPIATTNITGFLSGSYFLSVFHSYAPPLAKVR--LARAFTLAASLITLIGVYAFIFPSSSPSKTQHKLGAMCCLVTISVYAAPLSSVARALQLQSSKPISLFFALVGTLNAVLWSGYGLLTNDAWVYAPSVIGTILSVSQAAVFFWF 210 L +L+ L T ++V LNV P + E I R RT G + L V ++ N+ LW YG + P+ T G + + F+++++ ++P VR +A+A ++ A ++ + + A F + S + LG +C V I +YA+PL ++ R +Q +S+ + + V LN +LW +GL+ D +V P+ IG++ S +Q A++F + Sbjct: 5 LESLRVLTTCSSVLLNVSP-WPEFARINRQRTPGPLTVLPVVMLYCNSFLWTMYGFMIGQLFPLFATCSLGQCTCAGFIAIYYRWSPDRPAVRRLVAKAGSVMALCMSYVILGANEFTNQSREQVITTLGLLCISVNICLYASPLDTMKRVVQTKSAASLPISLCSVNLLNGLLWVAFGLVDGDYFVLTPNTIGSVRSAAQVALYFTY 211
BLAST of NO05G00560 vs. NCBI_GenBank
Match: CBN78832.1 (MtN3-like protein [Ectocarpus siliculosus]) HSP 1 Score: 88.2 bits (217), Expect = 4.000e-14 Identity = 59/215 (27.44%), Postives = 105/215 (48.84%), Query Frame = 0 Query: 7 LQTLATLTAVTLNVCPIFDEIPAIKRSRTTGDRSPLLFVAIWSNACLWIFYGIHTHAVHPIATTNITGFLSGSYFLSVFHSYAPPLAKVRLARAFTLAASLITLIGVYAFIFPSSSP-------------------SKTQHKLGAMCCLVTISVYAAPLSSVARALQLQSSKPISLFFALVGTLNAVLWSGYGLLTNDAWVYAPSVIGTILSVSQ 203 L+ A +A L V PI E ++RS+ G+RS FV +W+++ LW+ YG+ + P TN+ G Y+ +V+ ++A A + + AA+ + + V F + SP + Q LG T Y APL+ + + ++ +S++ +SL A+V + + LW YG++ +A++Y P+V+G SV+Q Sbjct: 5 LKLSALGSASLLFVAPI-HEFEEVRRSKHVGERSVFPFVCMWASSTLWLIYGLFIGDIVPTVVTNLLGLACSCYYCAVY-AWAVEPASRKSSTYNLFAATFLGICVVVTFCLGTFSPRPESWVSMQDADSTDSGGDERAQRFLGIAASAATAIQYGAPLAELVKVIRRRSTEGMSLALAVVSLVCSTLWMSYGVMLVNAFIYVPNVLGVCFSVTQ 217
BLAST of NO05G00560 vs. NCBI_GenBank
Match: XP_010249453.1 (PREDICTED: bidirectional sugar transporter SWEET12 [Nelumbo nucifera]) HSP 1 Score: 88.2 bits (217), Expect = 4.000e-14 Identity = 62/199 (31.16%), Postives = 106/199 (53.27%), Query Frame = 0 Query: 10 LATLTAVTLNVCPIFDEIPAIKRSRTTGDRSPLLFVAIWSNACLWIFYGIHTHAVHPIATTNITGFLSGSYFLSVFHSYAPPLAKVRLARAFTLAASLITLIGVYAFIFPSSSPSKTQHKLGAMCCLVTISVYAAPLSSVARALQLQSSK--PISLFFALVGTLNAVLWSGYGLLTNDAWVYAPSVIGTILSVSQAAVF 207 L + ++ + + P+ I K+ T G +S VA++S A LWI+YG+ H + T N G + + ++++F YAP A+V LA L ++ T + F + S LG++C ++SV+AAPLS + ++ +S + P SL F L TL+AV+W YG L D ++ P+++G I V+Q ++ Sbjct: 17 LGNIISLMVYLAPVPTFIRIYKKKSTEGFQSVPYVVALFS-AMLWIYYGLLKPDAHLLITINSVGCVIETSYITMFMVYAPKKARV-LAIKLLLLLNVGTFCSILLFTLFLAKGSNRVRVLGSICVAFSVSVFAAPLSIMRLVIRSKSVEFMPFSLSFFL--TLSAVMWFSYGFLLKDFYIALPNILGFIFGVAQMVLY 211 The following BLAST results are available for this feature:
BLAST of NO05G00560 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO05G00560 ID=NO05G00560|Name=NO05G00560|organism=Nannochloropsis oceanica|type=gene|length=1767bpback to top protein sequence of NO05G00560.1 >NO05G00560.1-protein ID=NO05G00560.1-protein|Name=NO05G00560.1|organism=Nannochloropsis oceanica|type=polypeptide|length=253bpback to top Synonyms
Publications
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