NO05G00530, NO05G00530 (gene) Nannochloropsis oceanica

Overview
NameNO05G00530
Unique NameNO05G00530
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2127
Alignment locationchr5:186473..188599 +

Link to JBrowse

Properties
Property NameValue
DescriptionGtp-binding protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:186473..188599 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
GO:0005525GTP binding
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR031166G_ENGA
IPR032859KH_dom-like
IPR006073GTP_binding_domain
Homology
BLAST of NO05G00530 vs. NCBI_GenBank
Match: EWM28325.1 (gtp-binding protein [Nannochloropsis gaditana])

HSP 1 Score: 688.3 bits (1775), Expect = 2.400e-194
Identity = 392/666 (58.86%), Postives = 464/666 (69.67%), Query Frame = 0
Query:   56 SSEVPHSRPFRIALIGRPNVGKSTLFNRLTGNAKGQWTGGSALVTPIPGTTRDRKTGPCSFGGFSMIVTDTGGLVEEDELGMDETEETVE-EXXED-DPRGLKRQRAREQRKLLQDLINAQVVQALQESDAVLFILDTRGGVGPEEAHLARWLHRMGVRDKTLLVANKAEGGVLSSEMQTAIYDAYEFGLGDPVAVSAAHNEGISDLASVLVERAKVLGFGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVITVAFVGLPNVGKSSLVNATLNKRPRAHPSHHRHPEDXXXXGNLDQAAATA--------------SSAYPRLITSSIAGTTRDVVLVDYSYRNHRLRLVDTAGIRKTGRQDHSNVLEHLSVTEALRAVRYANVVVLVLDGQQLRLRRQEQVIASRAFKEGRALVVAANKSDLLLTSPRVFAENVREQLKLLSPQLGSLPVVATSALNGQGVGSLLPAILRAYQAWNTRVSTGLLNRWLLETQRLRSPPLTATTRKTVKLKYMAQVKTRPPTFALVANRAEVEDSYVKFLRNRLQDDFGLHGMDVRLSIKST-GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREVTKRLKVEAQNKRRAFKTRTVG 705
            S++   +RPFR+ALIGRPNVGKSTLFNRLTG AKG+WTGG+A+VTPIPGTTRDRKTGPCS+ G SM+VTDTGGLVEEDE+ +++    VE E  ED DPRGL R+R R QRK +Q+LINAQV QA++ESDAVLF++D R GVGP EAH+A WLH++G   KT+LVANK EGGV SS+MQTA+YDAY FGLGDPVA+SAAHNEGIS+LA++LVE+A  +G                                                 +V+TVAFVGLPN GKSSLVNA L   PRA P     P++     N+D  +                 +++ PR+ITS +AGTTRDVV VDY+YR  RLRLVDTAGIRK GRQDH N+LE  SV EA RAV++ANVVVLVLD Q LRLRRQEQ +ASRAF+EGRALVV ANKSDLL TSP ++A+NVR+QL LLSPQLGSLPV+ATSAL  QG+GS+LPA+LRAY+AWNTRVSTGLLNRWLLETQRLR+ PLTATTRK VK+KY++Q+KTRPPTFALV NRA +E+SYVKFL+N L+D FGLHGMDVRL ++ T G                                                     XXXXX RE+TKR KVEA+NKRRA+ TR VG
Sbjct:    8 SNDKTSTRPFRVALIGRPNVGKSTLFNRLTGTAKGRWTGGTAIVTPIPGTTRDRKTGPCSYAGISMVVTDTGGLVEEDEVRIEDEAGDVEGEEVEDMDPRGLVRERVRAQRKQIQELINAQVAQAVKESDAVLFLVDARAGVGPGEAHVAGWLHKVGASGKTILVANKVEGGV-SSDMQTAVYDAYAFGLGDPVAISAAHNEGISELATLLVEKALSVGL---------------------QGANAPGIDAGRHHEKDAPGGCEGEKEEVVTVAFVGLPNAGKSSLVNAALEHLPRAPPGPGASPDE--DTDNVDSTSEEVEGRVPAALPWPRPLTASVPRMITSEVAGTTRDVVAVDYAYRGRRLRLVDTAGIRKRGRQDHRNLLEQWSVAEAFRAVQFANVVVLVLDAQHLRLRRQEQRVASRAFQEGRALVVVANKSDLLQTSPGLYAQNVRDQLHLLSPQLGSLPVLATSALTRQGIGSILPAVLRAYRAWNTRVSTGLLNRWLLETQRLRASPLTATTRKVVKMKYISQIKTRPPTFALVTNRAGMEESYVKFLKNHLRDSFGLHGMDVRLLLRCTGGENNPYAAKAAAEAAERKKAWMNRQKKKWAQESQDVGSGKAKRDDVEERVEQERXXXXXLREMTKRSKVEARNKRRAYNTRVVG 649          
BLAST of NO05G00530 vs. NCBI_GenBank
Match: CBN75868.1 (MEngA, mitochondrial EngA GTPase [Ectocarpus siliculosus])

HSP 1 Score: 305.1 bits (780), Expect = 5.800e-79
Identity = 200/557 (35.91%), Postives = 282/557 (50.63%), Query Frame = 0
Query:   65 FRIALIGRPNVGKSTLFNRLTGNAKGQWTGGSALVTPIPGTTRDRKTGPCSFGGFSMIVTDTGGLVEEDELGMDETEETVEEXXEDDPRGLKRQRAREQRKLLQDLINAQVVQALQESDAVLFILDTRGGVGPEEAHLARWLH-RMGVRDKTLLVANKAEGGVLSSEMQTAIYDAYEFGLGDPVAVSAAHNEGISDLASVLVERAKVLGFGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVITVAFVGLPNVGKSSLVNATLNKRPRAHPSHHRHPEDXXXXGNLDQAAATASSAYPRLITSSIAGTTRDVVLVDYSYRNHRLRLVDTAGIRKTGRQDHSNVLEHLSVTEALRAVRYANVVVLVLDGQQLRLRRQEQVIASRAFKEGRALVVAANKSDLLLTSPRVFAENVREQLKLLSPQLGSLPVVATSALNGQGVGSLLPAILRAYQAWNTRVSTGLLNRWLLETQRLRSPPLTATTRKTVKLKYMAQVKTRPPTFALVANRAEVEDSYVKFLRNRLQDDFGLHGMDVRLSIKST 621
            FR+ ++GRPNVGKSTL+NRL        T   A+VTPI GTTRDRK    S GG +    DTGGL    E G DE  +         P G            +  ++  +  +A+++SD VLF++D R GV   + H ARW+  R G      +VANK E G L+ +M   + +    G G+P+A+S++H +G++D A+ LV   +                                                    + + +A VG PNVGKSSL+NA L +                                 R +T    G TRD V V++++    +RLVDTAGIRK+G +D +  LE L+V +++ A+  A VVVLVLDG +  LR+ E  IAS    EGRALVVAANKSDL   SP  +A+ V  Q++ L P + + PV++  AL+G GVGSL+ ++++A + W  RV T +LNRWL +   L  PP  +TT     LKY+ QVK  PP F +  N   +   Y +++   LQ +FG HGM VRLS+K +
Sbjct:  114 FRVVIVGRPNVGKSTLYNRLA-------TRNRAIVTPIAGTTRDRKESTVSLGGMTFDFADTGGL----EDGADEPWK--------GPPGTPHPG-------MPQVVLKKTEEAIEDSDIVLFMVDARQGVTEADRHYARWVRKRQGRHRGVYIVANKTE-GQLTEQMSQTLEECGRLGFGEPLAISSSHGDGMADFATALVPHYE-------------------------EWEKEQEAAAEAGLESNRPLSEEEEAEEPVQLALVGRPNVGKSSLLNAVLRE--------------------------------DRALTGPTPGLTRDAVAVEWTWGGKAVRLVDTAGIRKSGSRDTTTPLEELAVKDSMNAIHKAQVVVLVLDGSEGMLRKTELSIASMVATEGRALVVAANKSDLSGVSPGEYAKGVIRQVEDLMPDVRAPPVLSVCALDGSGVGSLMRSVIKARERWRARVPTAVLNRWLRKIVFLHPPPRDSTTGGACSLKYLTQVKRGPPEFRVFVNHLSIPADYQRYITKNLQKEFGFHGMQVRLSLKKS 586          
BLAST of NO05G00530 vs. NCBI_GenBank
Match: KJS37682.1 (GTPase Der [Rhodospirillaceae bacterium BRH_c57])

HSP 1 Score: 279.3 bits (713), Expect = 3.400e-71
Identity = 193/555 (34.77%), Postives = 271/555 (48.83%), Query Frame = 0
Query:   65 FRIALIGRPNVGKSTLFNRLTGNAKGQWTGGSALVTPIPGTTRDRKTGPCSFGGFSMIVTDTGGLVEEDELGMDETEETVEEXXEDDPRGLKRQRAREQRKLLQDLINAQVVQALQESDAVLFILDTRGGVGPEEAHLARWLHRMGVRDKTLLVANKAEGGVLSSEMQTAIYDAYEFGLGDPVAVSAAHNEGISDLASVLVERAKVLGFGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVITVAFVGLPNVGKSSLVNATLNKRPRAHPSHHRHPEDXXXXGNLDQAAATASSAYPRLITSSIAGTTRDVVLVDYSYRNHRLRLVDTAGIRKTGRQDHSNVLEHLSVTEALRAVRYANVVVLVLDGQQLRLRRQEQVIASRAFKEGRALVVAANKSDLLLTSPRVFAENVREQLKLLSPQLGSLPVVATSALNGQGVGSLLPAILRAYQAWNTRVSTGLLNRWLLETQRLRSPPLTATTRKTVKLKYMAQVKTRPPTFAL-VANRAEVEDSYVKFLRNRLQDDFGLHGMDVRLSIK 619
            F +A+IGRPNVGKSTLFNRL G          A+V  +PG TRDR+    S  G    V DT GL        D T+E+                       L+  + AQ   AL ESD  LF++D R GV P +AH A  L R   +   +LVANK EG       Q  +Y++Y  GLGDPV +SA H EG+++L   L+  A+  G                                                   + +A VG PN GKS+L+N  + +                                 RL+    AG TRD + VD+ Y+  R+RLVDTAG+R+  R + S  LE LSV + L ++R A VV+L+LD   + L +Q+  IA     EGRALV+  NK D+         + + ++L+   PQ+  +P V  S L GQG+  L+ A+   ++ WN+R+ T  LNRWL E      PPL+ + R+ +KL+YM QVK+RPPTFA+ V+   E+ DSY+++L N L+DDFGL G+ VR+ ++
Sbjct:    3 FTVAIIGRPNVGKSTLFNRLVGRR-------LAIVHDLPGVTRDRRQHAASLAGLDFQVIDTAGL-------EDATDES-----------------------LEGRMRAQTEAALDESDVALFLIDARAGVTPLDAHFAALLRRH--KTPVILVANKCEG----KAGQPGLYESYSLGLGDPVPISAEHAEGMANLFDALIPFARAAGTDHASVLKATAEAEEDALLADLEEGQEVVLPERPDRP--------------LQLAIVGRPNTGKSTLINRLVGQ--------------------------------DRLLVGPEAGVTRDSIEVDWEYKGRRVRLVDTAGMRRKARVEDS--LEKLSVGDTLNSIRMAEVVILLLDADMV-LDKQDLTIARMVIDEGRALVIGVNKWDIAANREESI-QRLTDRLQTSLPQVKGVPTVTLSGLKGQGLDDLMSAVFEMHELWNSRIPTSPLNRWLEEILAHHPPPLSKSKRR-IKLRYMTQVKSRPPTFAIFVSKPDELPDSYMRYLVNALRDDFGLIGVPVRIHLR 463          
BLAST of NO05G00530 vs. NCBI_GenBank
Match: PJI43389.1 (ribosome biogenesis GTPase Der [Ferrovibrio sp.])

HSP 1 Score: 278.5 bits (711), Expect = 5.800e-71
Identity = 194/555 (34.95%), Postives = 269/555 (48.47%), Query Frame = 0
Query:   66 RIALIGRPNVGKSTLFNRLTGNAKGQWTGGSALVTPIPGTTRDRKTGPCSFGGFSMIVTDTGGLVEEDELGMDETEETVEEXXEDDPRGLKRQRAREQRKLLQDLINAQVVQALQESDAVLFILDTRGGVGPEEAHLARWLHRMGVRDKTLLVANKAEGGVLSSEMQTAIYDAYEFGLGDPVAVSAAHNEGISDLASVLVERAKVLGFGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVITVAFVGLPNVGKSSLVNATLNKRPRAHPSHHRHPEDXXXXGNLDQAAATASSAYPRLITSSIAGTTRDVVLVDYSYRNHRLRLVDTAGIRKTGRQDHSNVLEHLSVTEALRAVRYANVVVLVLDGQQLRLRRQEQVIASRAFKEGRALVVAANKSDLLLTSPRVFA-ENVREQLKLLSPQLGSLPVVATSALNGQGVGSLLPAILRAYQAWNTRVSTGLLNRWLLETQRLRSPPLTATTRKTVKLKYMAQVKTRPPTFALVANRAE-VEDSYVKFLRNRLQDDFGLHGMDVRLSIK 619
            ++A++GRPNVGKSTLFNRL G          A+V   PG TRDR+ G    G       DT GL + D          VE                     +   +  Q   A+QE+DAVLF++D R GV P ++H A WL +   +   +LVANK EGG   S     + +AY  GLGDP+ VSA H EG+ DLA  L+E       G+                                                I +A VG PN GKS+LVNA +                                   RL+T    G TRD + + + Y   +++LVDTAG+R+  R +    LE LSV ++LR +R A VVVLVLDG  L   +Q+  IA    +EGR+LV+A NK D +    R  A + + ++L+   PQ   +PVV  SAL G+ +  LLPA+++ Y  WNTR+ T  LNRWL E  +  +PPL     ++V ++Y  QVK RPPT AL A RAE + +SY+++L N L++ F L G+ VR+ ++
Sbjct:    4 KVAIVGRPNVGKSTLFNRLVGKR-------LAIVDDTPGVTRDRREGAAMLGDLEFTAVDTAGLEDSD----------VES--------------------MTGRMRLQTEAAVQEADAVLFVIDGRAGVTPLDSHFANWLRKQ--KTPVILVANKCEGGAGKS----GVGEAYALGLGDPLPVSAEHGEGMYDLAVALIEHIGGRSGGALGDDGDELDLVEVDIDLDPENETPLIDDPSKP----------------IQLAIVGRPNAGKSTLVNALIGS--------------------------------DRLLTGPEPGLTRDAIAIQWEYDGRKVKLVDTAGMRRKARVEQK--LEKLSVADSLRTIRLAQVVVLVLDG-ALGFDKQDLTIADHVLQEGRSLVIAINKWDAV--EDRALALKEIEDRLERSLPQARGVPVVTLSALTGRHLDRLLPAVMQQYHRWNTRIPTSRLNRWLSEMTQRNAPPLAG--GRSVNIRYATQVKARPPTVALFAPRAEYIPESYLRYLINGLREHFNLQGVPVRMHLR 460          
BLAST of NO05G00530 vs. NCBI_GenBank
Match: WP_007679686.1 (ribosome biogenesis GTPase Der [alpha proteobacterium BAL199] >EDP61805.1 GTP-binding protein engA [alpha proteobacterium BAL199])

HSP 1 Score: 276.2 bits (705), Expect = 2.900e-70
Identity = 197/555 (35.50%), Postives = 273/555 (49.19%), Query Frame = 0
Query:   66 RIALIGRPNVGKSTLFNRLTGNAKGQWTGGSALVTPIPGTTRDRKTGPCSFGGFSMIVTDTGGLVEEDELGMDETEETVEEXXEDDPRGLKRQRAREQRKLLQDLINAQVVQALQESDAVLFILDTRGGVGPEEAHLARWLHRMGVRDKTLLVANKAEGGVLSSEMQTAIYDAYEFGLGDPVAVSAAHNEGISDLASVLVERAKVLG-FGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVITVAFVGLPNVGKSSLVNATLNKRPRAHPSHHRHPEDXXXXGNLDQAAATASSAYPRLITSSIAGTTRDVVLVDYSYRNHRLRLVDTAGIRKTGRQDHSNVLEHLSVTEALRAVRYANVVVLVLDGQQLRLRRQEQVIASRAFKEGRALVVAANKSDLLLTSPRVFAENVREQLKLLSPQLGSLPVVATSALNGQGVGSLLPAILRAYQAWNTRVSTGLLNRWLLETQRLRSPPLTATTRKTVKLKYMAQVKTRPPTF-ALVANRAEVEDSYVKFLRNRLQDDFGLHGMDVRLSIK 619
            ++A+IGRPNVGKSTLFNRLTG          ALV   PG TRDR+ G       S  V DT GL               E+  +D                L+  +  Q  +A+ E+D V  ++D R G+ P ++H A WL R+ V    +++ANK EG   ++     + +AY  GLGDPV VSA H EG+ +L  ++ E A+  G FG+                                                I +A VG PNVGKS+LVN  + +                                 RL+T   AG TRD + V++ YR+  +RLVDTAG+R+  R      LE LS  +  RAVRYA+VV+LVLDG+ + L +Q+  IA  A +EGRALV+AANK D ++      ++ +R++L     Q+  +P V  SA+ G  +  LL A+L  Y  WNTR+ T  LNRWL        PPL    R  VK++YM Q K RPPTF A V+   E+ DSYV++L   L+D+FGL G+ +RL ++
Sbjct:    4 KVAVIGRPNVGKSTLFNRLTGTR-------HALVDDTPGVTRDRREGDGRIADLSFRVIDTAGL---------------EDAFDDS---------------LEARMRRQTERAVAEADLVFMLIDARAGITPLDSHFADWLRRVDV--PVVVLANKCEGRAGAA----GLAEAYSLGLGDPVPVSAEHGEGMGELYDIIRELAERKGEFGAPEPEPEPAWPGEEVELSDEMEAEPEVGP--------------------IRLAIVGRPNVGKSTLVNRLIGE--------------------------------DRLLTGPEAGITRDAIEVEWQYRDRPIRLVDTAGMRRKARVQEK--LERLSTADTRRAVRYAHVVLLVLDGEMM-LEKQDLTIARMALEEGRALVIAANKWD-VIQDKNAASQMLRDRLDTSLTQVRGVPWVPVSAVRGTNLTKLLDAVLETYDRWNTRIPTAKLNRWLEGMLEAHPPPLAKGRR--VKIRYMTQAKARPPTFAAFVSQATELPDSYVRYLTGGLRDEFGLVGVPIRLYLR 457          
BLAST of NO05G00530 vs. NCBI_GenBank
Match: OUR76679.1 (ribosome biogenesis GTPase Der [Alphaproteobacteria bacterium 46_93_T64])

HSP 1 Score: 273.5 bits (698), Expect = 1.900e-69
Identity = 193/554 (34.84%), Postives = 274/554 (49.46%), Query Frame = 0
Query:   65 FRIALIGRPNVGKSTLFNRLTGNAKGQWTGGSALVTPIPGTTRDRKTGPCSFGGFSMIVTDTGGLVEEDELGMDETEETVEEXXEDDPRGLKRQRAREQRKLLQDLINAQVVQALQESDAVLFILDTRGGVGPEEAHLARWLHRMGVRDKTLLVANKAEGGVLSSEMQTAIYDAYEFGLGDPVAVSAAHNEGISDLASVLV--ERAKVLGFGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVITVAFVGLPNVGKSSLVNATLNKRPRAHPSHHRHPEDXXXXGNLDQAAATASSAYPRLITSSIAGTTRDVVLVDYSYRNHRLRLVDTAGIRKTGRQDHSNVLEHLSVTEALRAVRYANVVVLVLDGQQLRLRRQEQVIASRAFKEGRALVVAANKSDLLLTSPRVFAENVREQLKLLSPQLGSLPVVATSALNGQGVGSLLPAILRAYQAWNTRVSTGLLNRWLLETQRLRSPPLTATTRKTVKLKYMAQVKTRPPTFAL-VANRAEVEDSYVKFLRNRLQDDFGLHGMDVRL 616
            F +A+IGRPNVGKSTLFNRL G          ALV   PG TRDR+ G  S G     V DT GL               EE  +D   G  R+               Q   AL+E+D  L + D R GV P + H A WL +  +    +++ANK EG +  +E+     DAY  GLGDP+ +SA H EG+ DL   L+  E+ +V    +                                                + +A VG PN GKS+LVN  L +                                 RL+T   AG TRD + V++ +   +++LVDTAGIRK  R      LE LSV ++LR +  A VVVLV+D   +   +Q+  +AS    EGRALVVA NK D +   P +  +++R +L++  PQ+  +PVV  S+L+G+G+ +LLP++L  Y  WN RV T  LNRW LE    R PP  A  R+ +K++Y+ QVK+RPPTF+L +++R E+ D+Y+++L N L++DF +  + +RL
Sbjct:    3 FTVAIIGRPNVGKSTLFNRLVGKR-------LALVDDTPGVTRDRREGNASLGSLKFKVIDTAGL---------------EEAFDDSLEGRMRR---------------QTETALEEADVALMLYDARIGVSPMDKHFAGWLRKAKI--PVIVIANKCEGKMAHAELS----DAYSLGLGDPLPLSAEHGEGLGDLFDFLLPFEKGEVEEVAAKDRP--------------------------------------------LHLAIVGRPNAGKSTLVNKLLGEE--------------------------------RLLTGPEAGVTRDSIAVEWEFEGQKIKLVDTAGIRKRARVQKK--LEKLSVADSLRVINMAEVVVLVIDA-DVSFEKQDLTLASHVINEGRALVVAVNKWDTVKDRPAML-KHIRGKLQVSLPQVRGVPVVTLSSLSGRGLENLLPSVLEVYDLWNKRVPTSQLNRW-LELMLERHPPPMAKGRR-LKVRYITQVKSRPPTFSLFMSSRGELPDAYIRYLINGLREDFDMPAVPIRL 431          
BLAST of NO05G00530 vs. NCBI_GenBank
Match: XP_009821349.1 (ribosome-associated GTPase EngA [Aphanomyces astaci] >ETV88949.1 ribosome-associated GTPase EngA [Aphanomyces astaci])

HSP 1 Score: 272.7 bits (696), Expect = 3.200e-69
Identity = 193/582 (33.16%), Postives = 283/582 (48.63%), Query Frame = 0
Query:   40 PLHHRTHFTTTNGSSKSSEVPHSRPFRIALIGRPNVGKSTLFNRLTGNAKGQWTGGSALVTPIPGTTRDRKTGPCSFGGFSMIVTDTGGLVEEDELGMDETEETVEEXXEDDPRGLKRQRAREQRKLLQDLINAQVVQALQESDAVLFILDTRGGVGPEEAHLARWLHRMGVRDKTLLVANKAEGGVLSSEMQTAIYDAYEFGLGDPVAVSAAHNEGISDLASVLVERAKVLGFGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVITVAFVGLPNVGKSSLVNATLNKRPRAHPSHHRHPEDXXXXGNLDQAAATASSAYPRLITSSIAGTTRDVVLVDYSYRNHRLRLVDTAGIRKTGRQDHSNVLEHLSVTEALRAVRYANVVVLVLDGQQLRLRRQEQVIASRAFKEGRALVVAANKSDLLLTSPRVFAENVREQLKLLSPQLGSLPVVATSALNGQGVGSLLPAILRAYQAWNTRVSTGLLNRWLLETQRLRSPPLTATTRKTVKLKYMAQVKTRPPTFALVANRA-EVEDSYVKFLRNRLQDDFGLHGMDVRLSIKST 621
            P+H    F+T     KS      R  RIAL+GR N+GKSTLFNRLT           A+V  +PGTTRDR+       G    V DTGGL +     ++              RG+  Q  R                AL E+D +LF++D R GV   + H ARWL +   +    LVANK EG   +++  + I+D+++ G+G+P+ +SA H EG++DL  +LV   +                                                      I +A VG PNVGKS+L+N  +                                   R++T    G TRD V V +++ N  + LVDTAGIRK  ++DHSN +E+LSV +   A+  A VV +V+D  + +L   +  IA R   EGRALV+ ANK+D L+   +   E +R +L     Q+  +P+V+ SAL G+G+ ++LP ++ A+  W+ RV+TG LNRW+    R   PP      KT+K+KY+ QVK RPPTFAL  N+A +V +SY +FL N+L+ +F + G+  RL ++ +
Sbjct:   12 PVHAHLSFST-----KSPPTLPERA-RIALVGRTNIGKSTLFNRLTKTR-------GAIVHNVPGTTRDRRFAVGYLAGLDFDVIDTGGLADAPSGSLE--------------RGMLSQTER----------------ALHEADLILFLIDGREGVTEIDKHFARWLRKADPQAPIQLVANKLEGD--ATQWLSNIHDSFQLGMGEPLVISAEHGEGLTDLVPLLVPLVE-----------------------GHAEALAVQKAALAAELPAGDTMDELENPRSIKLAIVGRPNVGKSTLLNKIVRD--------------------------------DRVLTGPEPGVTRDAVEVKWAFHNREITLVDTAGIRKFSKRDHSNQIENLSVRDTYDAISSAQVVCVVVDVSEKQLIHLDLTIAQRVLDEGRALVLVANKAD-LVDDAQAEIERIRGELDGSLAQVRGVPIVSISALEGKGIRNILPEVVAAHDRWDLRVTTGRLNRWMAAMDRHHPPP--TVKGKTLKVKYITQVKARPPTFALFVNKADDVPESYRRFLLNQLRTEFDMTGVPARLLLRGS 490          
BLAST of NO05G00530 vs. NCBI_GenBank
Match: OUX96725.1 (ribosome biogenesis GTPase Der [Candidatus Endolissoclinum sp. TMED26])

HSP 1 Score: 271.9 bits (694), Expect = 5.500e-69
Identity = 191/551 (34.66%), Postives = 266/551 (48.28%), Query Frame = 0
Query:   65 FRIALIGRPNVGKSTLFNRLTGNAKGQWTGGSALVTPIPGTTRDRKTGPCSFGGFSMIVTDTGGLVEEDELGMDETEETVEEXXEDDPRGLKRQRAREQRKLLQDLINAQVVQALQESDAVLFILDTRGGVGPEEAHLARWLHRMGVRDKTLLVANKAEGGVLSSEMQTAIYDAYEFGLGDPVAVSAAHNEGISDLASVLVERAKVLGFGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVITVAFVGLPNVGKSSLVNATLNKRPRAHPSHHRHPEDXXXXGNLDQAAATASSAYPRLITSSIAGTTRDVVLVDYSYRNHRLRLVDTAGIRKTGRQDHSNVLEHLSVTEALRAVRYANVVVLVLDGQQLRLRRQEQVIASRAFKEGRALVVAANKSDLLLTSPRVFAENVREQLKLLSPQLGSLPVVATSALNGQGVGSLLPAILRAYQAWNTRVSTGLLNRWLLETQRLRSPPLTATTRKTVKLKYMAQVKTRPPTF-ALVANRAEVEDSYVKFLRNRLQDDFGLHGMDVR 615
            F +A++GRPNVGKSTLFNRL G          ALV   PG TRDR+ G       +  V DT GL E+ E G                              L+  + AQ  +A+ ++D VL ++D R GV P + H ARWL R     K +L+ANK EG    +  +  +Y+A+  GLG+PVA+SA HNEG++DL + + ER  +                                                    V+ +A VG PNVGKS+L+NA L +                                 RL+T   AG TRD + V + Y    L+LVDTAG+R+  R   +  LE LSV +  RA++YA+VVVLVLD   + L +Q+  IA    +EGRAL++AANK D +    +    + R++ ++   Q+   P V  SAL G+ +  L  A  + Y  WNTR+ST  LNRWL+       PPL    R  +KL+YM QVK RPPTF A V+   E+ ++Y ++L N L++DF L G  +R
Sbjct:    3 FTVAIVGRPNVGKSTLFNRLIGKR-------HALVDDTPGVTRDRREGDGRIADLNFKVIDTAGL-EDAEAG-----------------------------TLEGRMRAQTERAIVDADLVLMMIDARAGVTPLDNHFARWLRRES--XKVVLLANKCEG----AAARNGLYEAFGMGLGEPVAISAEHNEGMADLYAAIKERMPL--------------------EAEFETDEKLGLEDGQPPEEGVDVWQDRDQPRVMXIAVVGRPNVGKSTLINAILGEE--------------------------------RLLTGPEAGITRDAIEVXWQYGGRFLKLVDTAGLRRRARV--TEKLEKLSVADTRRAIQYAHVVVLVLDANMM-LEKQDLTIARMVIEEGRALIIAANKWDAVANREQA-RRDYRDRFEISLAQVKGAPFVTVSALQGRNLDKLFDAAFQVYDTWNTRISTSRLNRWLMVMTERHPPPLAKGRR--IKLRYMTQVKARPPTFAAFVSQPQELPEAYSRYLVNGLREDFELPGTPIR 452          
BLAST of NO05G00530 vs. NCBI_GenBank
Match: PIW26204.1 (ribosome biogenesis GTPase Der [Rhodospirillales bacterium CG15_BIG_FIL_POST_REV_8_21_14_020_66_15])

HSP 1 Score: 271.2 bits (692), Expect = 9.300e-69
Identity = 194/553 (35.08%), Postives = 265/553 (47.92%), Query Frame = 0
Query:   64 PFRIALIGRPNVGKSTLFNRLTGNAKGQWTGGSALVTPIPGTTRDRKTGPCSFGGFSMIVTDTGGLVEEDELGMDETEETVEEXXEDDPRGLKRQRAREQRKLLQDLINAQVVQALQESDAVLFILDTRGGVGPEEAHLARWLHRMGVRDKTLLVANKAEGGVLSSEMQTAIYDAYEFGLGDPVAVSAAHNEGISDLASVLVERAKVLGFGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVITVAFVGLPNVGKSSLVNATLNKRPRAHPSHHRHPEDXXXXGNLDQAAATASSAYPRLITSSIAGTTRDVVLVDYSYRNHRLRLVDTAGIRKTGRQDHSNVLEHLSVTEALRAVRYANVVVLVLDGQQLRLRRQEQVIASRAFKEGRALVVAANKSDLLLTSPRVFAENVREQLKLLSPQLGSLPVVATSALNGQGVGSLLPAILRAYQAWNTRVSTGLLNRWLLETQRLRSPPLTATTRKTVKLKYMAQVKTRPPTFALVANRA-EVEDSYVKFLRNRLQDDFGLHGMDVRL 616
            PF IA+IGRPNVGKSTLFNRL G          A+V   PG TRDR+ G    G     V DT GL        D T++++E           R RA+ +R             AL E+D  L ++D R GV P + H  +WL   G    T+LVANK EG       +  + + Y  GL DPVA+SA H  G+S+L   L   A +                                                     + +A VG PNVGKS+++N  L +                                 R++T   AG TRD + V + +     RL+DTAG+R+  R   ++ LE+LS  + +RAVR+A+VVVLVLD   + L +Q+  IA +  +EGRAL++A NK D   T  R   + + ++L+   PQ+  +PV+  SAL G G+  LLP +  AY  WN R+ TG LNRWLL  Q     P+     K ++L+Y  Q KTRPPTF +   RA E+ DSY +FL N L+DDFGL G+ +RL
Sbjct:    2 PFTIAIIGRPNVGKSTLFNRLVGRR-------LAIVDDTPGVTRDRREGEGKLGDMRFRVIDTAGL-------EDVTDDSLE----------ARMRAQTER-------------ALDEADVALMVIDARAGVTPLDQHFVQWLRGRGT--PTILVANKCEG----RGGEAGMLEGYSLGLDDPVALSAEHGLGLSELHDRLKPYADLAA----------------AEGAEVYDDDLDDLDVDYAEGADIAEDGGAPEPKALQLAIVGRPNVGKSTMINRLLGE--------------------------------DRMLTGPEAGITRDAISVMWHHGGRDYRLIDTAGLRRKARV--TDKLEYLSTRDTMRAVRFAHVVVLVLDADAV-LEKQDLTIARQVVEEGRALIIAVNKWD-AATDRRETIQRLSDRLQTSLPQVRGIPVITCSALTGHGMDRLLPTVNAAYDTWNARIGTGDLNRWLLAMQEAHPAPM-GKGGKRIRLRYATQAKTRPPTFIVFCTRAGELPDSYTRFLVNGLRDDFGLDGVPIRL 458          
BLAST of NO05G00530 vs. NCBI_GenBank
Match: XP_008903144.1 (ribosome-associated GTPase EngA [Phytophthora parasitica INRA-310] >ETN11335.1 ribosome-associated GTPase EngA [Phytophthora parasitica INRA-310] >ETP48603.1 ribosome-associated GTPase EngA [Phytophthora parasitica P10297])

HSP 1 Score: 270.8 bits (691), Expect = 1.200e-68
Identity = 218/587 (37.14%), Postives = 305/587 (51.96%), Query Frame = 0
Query:   33 SFSSTTIPLHHRTHFTTTNGSSKSSEVPHSRPFRIALIGRPNVGKSTLFNRLTGNAKGQWTGGSALVTPIPGTTRDRKTGPCSFGGFSMIVTDTGGLVEEDELGMDETEETVEEXXEDDPRGLKRQRAREQRKLLQDLINAQVVQALQESDAVLFILDTRGGVGPEEAHLARWLHRMGVRDKTLLVANKAEGGVLSSEMQTAIYDAYEFGLGDPVAVSAAHNEGISDLASVLVERAKVLGFGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVITVAFVGLPNVGKSSLVNATLNKRPRAHPSHHRHPEDXXXXGNLDQAAATASSAYPRLITSSIAGTTRDVVLVDYSYRNHRLRLVDTAGIRKTGRQDHSNVLEHLSVTEALRAVRYANVVVLVLDGQQLRLRRQEQVIASRAFKEGRALVVAANKSDLLLTSPRVFAENVREQLKLLSPQLGSLPVVATSALNGQGVGSLLPAILRAYQAWNTRVSTGLLNRWLLETQRLRSPPLTATTRKTVKLKYMAQVKTRPPTFAL-VANRAEVEDSYVKFLRNRLQDDFGLHGMDVRLSIK 619
            S +ST +    R   +  N +   S +      RIAL+GR NVGKSTLFNRLT          SA+V  +PGTTRDR+    +  G  + V DTGGL                   ED P G   +   EQ +L           A+ E+D V F++D R G+ P + H ARWL +   R    LVANK EG       +  + D Y+ G+G  + +SA H EGI+ L   ++                                XXXXXXXXXXXXXXXXXXXXXXX   I +A VG PNVGKS+L+N  +                                   R++T    G TRD V V +++    ++LVDTAGIR+  ++DH++ +E+LSV ++ RA+  A VVV+V+D  + +L   +  IA R  +EGRALV+AANKSDL   S     + ++ +L     Q+  +PVV  SAL G G+  L+P +L+AY+ W+ RV+TG LNRWL    R   PP      KT+ +KY  QVK+RPPTFA+ V+N +EV +SY +FL ++L+++F + G+  RL ++
Sbjct:   10 SRASTGLLRPVRCFSSVVNETETRSFLEDHPRLRIALVGRTNVGKSTLFNRLTKTR-------SAIVHNVPGTTRDRRYKRATVAGLELDVVDTGGL-------------------EDTPSGTLEEGMLEQTRL-----------AVHEADLVFFLVDGRQGITPVDKHFARWLRKENPRAPIHLVANKLEGD--PERWEDELNDCYQLGMGGAIPLSAEHGEGITLLLDEII---------------------------PVYEKXXXXXXXXXXXXXXXXXXXXXXXPRTIKLAIVGRPNVGKSTLLNKIVRN--------------------------------DRVLTGPEPGVTRDSVEVPWTFHGRPIKLVDTAGIRRYSKRDHNDQIENLSVRDSFRAIDSAQVVVVVVDMSEPKLIHMDLTIAQRVIEEGRALVLAANKSDLAGASVDFEMQRIQNELHDSLAQVRGVPVVPISALTGNGIKKLVPEVLKAYEKWDLRVTTGRLNRWLKAMARHHPPP--TVKGKTLNVKYATQVKSRPPTFAVFVSNPSEVPESYQRFLLSQLREEFDMVGVPARLLLR 496          
The following BLAST results are available for this feature:
BLAST of NO05G00530 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM28325.12.400e-19458.86gtp-binding protein [Nannochloropsis gaditana][more]
CBN75868.15.800e-7935.91MEngA, mitochondrial EngA GTPase [Ectocarpus silic... [more]
KJS37682.13.400e-7134.77GTPase Der [Rhodospirillaceae bacterium BRH_c57][more]
PJI43389.15.800e-7134.95ribosome biogenesis GTPase Der [Ferrovibrio sp.][more]
WP_007679686.12.900e-7035.50ribosome biogenesis GTPase Der [alpha proteobacter... [more]
OUR76679.11.900e-6934.84ribosome biogenesis GTPase Der [Alphaproteobacteri... [more]
XP_009821349.13.200e-6933.16ribosome-associated GTPase EngA [Aphanomyces astac... [more]
OUX96725.15.500e-6934.66ribosome biogenesis GTPase Der [Candidatus Endolis... [more]
PIW26204.19.300e-6935.08ribosome biogenesis GTPase Der [Rhodospirillales b... [more]
XP_008903144.11.200e-6837.14ribosome-associated GTPase EngA [Phytophthora para... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL087nonsL087Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL086nonsL086Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR092ncniR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR119ngnoR119Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR118ngnoR118Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003829NSK003829Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G00530.1NO05G00530.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|539726gene_2846Nannochloropsis oceanica (N. oceanica CCMP1779)gene
MEngAgene2246Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G00530.1NO05G00530.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G00530 ID=NO05G00530|Name=NO05G00530|organism=Nannochloropsis oceanica|type=gene|length=2127bp
ATGCTGGCCTACCGCATGTCCTCCCTGTCCTTGGTTTGTCGTCGTGGGTC
GAGACCGGCACACCGCAGCCGACCTCCCCACCCCCTATTCCTGCCCTCCT
TCTCCTCCACCACCATCCCCCTCCACCACCGCACCCACTTTACCACCACG
AACGGTAGCAGCAAATCATCAGAAGTGCCACATTCACGGCCCTTCCGCAT
TGCCCTGATCGGACGTCCTAACGTGGGTAAATCCACGCTCTTCAATCGTC
TAACTGGTAATGCGAAAGGGCAATGGACAGGGGGAAGTGCGCTGGTGACC
CCCATTCCCGGCACTACACGTGATCGGAAAACAGGCCCATGTTCTTTTGG
AGGCTTTTCAATGATTGTGACGGACACGGGGGGGCTTGTGGAGGAGGATG
AGCTGGGAATGGACGAGACGGAGGAAACAGTCGAGGAGGAGGACGAGGAC
GATCCGCGAGGACTGAAGAGGCAAAGAGCACGGGAGCAAAGGAAGTTATT
ACAGGATCTGATAAACGCTCAAGTAGTTCAGGCATTGCAGGAGAGCGATG
CTGTTTTGTTCATCCTGGATACAAGAGGAGGGGTCGGGCCTGAAGAAGCG
CATTTAGCGAGATGGTTGCACCGGATGGGAGTCCGGGACAAGACGTTGCT
TGTGGCTAACAAGGCAGAAGGAGGAGTATTGTCCTCCGAGATGCAAACTG
CTATATATGACGCCTATGAATTTGGGCTAGGGGATCCGGTGGCGGTGTCG
GCGGCACATAACGAGGGGATATCGGATTTGGCGTCTGTCTTGGTGGAGAG
GGCGAAGGTACTGGGCTTCGGGAGTGGAGGTAGTAGTAGCAGCAGCAGTA
GCAGTGTAGGGAGTGGAAGCAGAAAGGAGAATGGGAGGGAAATGGATAAT
AACGAACAAAGGGAAGGGGAGGGGGGAGAAGAGGGGGAGGACGAGGAGGA
GGGAGGGAAGGAGGACGTGATCACCGTTGCCTTTGTGGGGTTACCAAACG
TGGGAAAATCAAGCCTCGTCAATGCAACGCTCAACAAACGCCCTCGAGCC
CACCCTTCTCACCACCGGCACCCTGAAGACGATGATGAGGAAGGAAACCT
CGATCAAGCAGCAGCAACAGCATCGTCCGCCTATCCGCGCCTCATTACCT
CCTCCATCGCCGGTACCACTCGCGACGTCGTCCTAGTGGACTACTCTTAC
CGAAATCATCGTCTTCGCCTAGTCGACACGGCTGGGATCCGTAAAACCGG
CCGCCAAGACCACTCCAACGTCCTCGAACACCTCTCAGTAACGGAAGCCC
TCCGCGCCGTCCGTTACGCTAACGTCGTCGTCCTCGTCCTGGACGGACAG
CAGCTCCGCCTTCGTCGGCAAGAGCAGGTGATCGCCTCCCGTGCTTTCAA
GGAAGGACGAGCCCTTGTCGTGGCAGCGAACAAATCCGACCTCCTCTTAA
CCTCCCCCCGTGTCTTCGCAGAGAACGTCCGCGAGCAACTGAAGCTCCTC
TCGCCCCAACTGGGGTCCTTACCCGTCGTGGCCACATCAGCGCTAAATGG
TCAAGGGGTGGGTAGTCTACTACCGGCCATCCTGCGGGCGTACCAAGCCT
GGAACACGCGGGTGAGCACAGGCTTGCTGAACCGCTGGCTGCTCGAAACC
CAACGTTTGCGTTCTCCCCCGCTAACGGCCACGACCCGGAAGACCGTCAA
ACTGAAGTACATGGCTCAGGTTAAGACACGCCCACCTACCTTTGCATTGG
TTGCAAACAGGGCAGAGGTGGAAGATAGCTATGTCAAATTTTTAAGGAAT
CGCTTACAAGACGATTTTGGCCTGCATGGGATGGATGTCCGCCTGTCGAT
TAAGAGTACGGGGGGGGACAATAACCCGTATGCGGCCAAGGCGGCCCAGG
AGCGGGCAGAACGGAGGAGGGCCTTGGTGAATAAGCGGAGGAAGAAGAGG
GCGGAGTGGGAGGGAGGAGGACGGGGAGCAGATAACAAGGAGGACGAAGA
GGAGAGGGAGGAGGAAGAGAGGAAGAAGCGACGGCAGGCTCGGGAGGTGA
CCAAGAGGCTCAAGGTTGAGGCGCAGAACAAGAGGAGGGCGTTTAAGACC
CGGACAGTGGGGAGCTCCCTGCATTAA
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protein sequence of NO05G00530.1

>NO05G00530.1-protein ID=NO05G00530.1-protein|Name=NO05G00530.1|organism=Nannochloropsis oceanica|type=polypeptide|length=709bp
MLAYRMSSLSLVCRRGSRPAHRSRPPHPLFLPSFSSTTIPLHHRTHFTTT
NGSSKSSEVPHSRPFRIALIGRPNVGKSTLFNRLTGNAKGQWTGGSALVT
PIPGTTRDRKTGPCSFGGFSMIVTDTGGLVEEDELGMDETEETVEEEDED
DPRGLKRQRAREQRKLLQDLINAQVVQALQESDAVLFILDTRGGVGPEEA
HLARWLHRMGVRDKTLLVANKAEGGVLSSEMQTAIYDAYEFGLGDPVAVS
AAHNEGISDLASVLVERAKVLGFGSGGSSSSSSSSVGSGSRKENGREMDN
NEQREGEGGEEGEDEEEGGKEDVITVAFVGLPNVGKSSLVNATLNKRPRA
HPSHHRHPEDDDEEGNLDQAAATASSAYPRLITSSIAGTTRDVVLVDYSY
RNHRLRLVDTAGIRKTGRQDHSNVLEHLSVTEALRAVRYANVVVLVLDGQ
QLRLRRQEQVIASRAFKEGRALVVAANKSDLLLTSPRVFAENVREQLKLL
SPQLGSLPVVATSALNGQGVGSLLPAILRAYQAWNTRVSTGLLNRWLLET
QRLRSPPLTATTRKTVKLKYMAQVKTRPPTFALVANRAEVEDSYVKFLRN
RLQDDFGLHGMDVRLSIKSTGGDNNPYAAKAAQERAERRRALVNKRRKKR
AEWEGGGRGADNKEDEEEREEEERKKRRQAREVTKRLKVEAQNKRRAFKT
RTVGSSLH*
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Synonyms
Publications