NO05G00480, NO05G00480 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO05G00480 vs. NCBI_GenBank
Match: EWM28329.1 (o-phosphoseryl-trna selenium transferase [Nannochloropsis gaditana]) HSP 1 Score: 207.6 bits (527), Expect = 4.700e-50 Identity = 130/249 (52.21%), Postives = 162/249 (65.06%), Query Frame = 0 Query: 41 RLCRMYPGRANATPLHDLFITLLSLGRSGYLSLLQERKSLLPLMRGGLRAIAEKHGGRLLSTPGNTISFAVTLNGLLCSKKGDEARNDEXXXXXXXXXLSLLGAMLFTRGVSGTRVVIPAPA-------------YSSLHSSLSPSXXXXXXXXXXXXXXXXPHRK-----MKTVAGLSFAGYGSHSDARYPPGPYLTAACALGVRKEEVEEFLKKLDRAMTDFMKMRAKKG-------RRKKEERATR 265 RL +MYPGRANATPLHDLFITLLS+GR+GYL LL+ER +L+P+MRGGL+ +AEKH RLL TP N+ISFA+TLNGLL ++ + + +E LS LG+MLF RGVSGTRVVIP XXXXXXXXX P + +K VAG+ F GYGSH++ YPPGPYLTAACALG+ K+EVEEFL++LDR +++F K R K G KKE++A + Sbjct: 511 RLGKMYPGRANATPLHDLFITLLSMGRNGYLKLLRERNALIPVMRGGLQGVAEKHQCRLLETPRNSISFAITLNGLL--REDGDGQEEE---AGGEGGLSFLGSMLFARGVSGTRVVIPVKVSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHVPTSRGPSKSITPPPVKIVAGVPFLGYGSHTNEAYPPGPYLTAACALGITKDEVEEFLRRLDRTLSEFQKKRGKVGAETWERLEEKKEQQARK 754
BLAST of NO05G00480 vs. NCBI_GenBank
Match: GAX26268.1 (O-phospho-L-seryl-tRNASec:L-selenocysteinyl-tRNA synthase [Fistulifera solaris]) HSP 1 Score: 143.7 bits (361), Expect = 8.400e-31 Identity = 86/216 (39.81%), Postives = 121/216 (56.02%), Query Frame = 0 Query: 38 LVTRLCRMYPGRANATPLHDLFITLLSLGRSGYLSLLQERKSLLPLMRGGLRAIAEKHGGRLLSTPGNTISFAVTLNGLLCSKKGDEARNDEXXXXXXXXXLSLLGAMLFTRGVSGTRVVIPAPAYSSLHSSLSPSXXXXXXXXXXXXXXXXPHRKMKTVAGLSFAGYGSHSDARYPPGPYLTAACALGVRKEEVEEFLKKLDRAMTDFMKMRAKK 254 ++ + ++Y GRA+++P+ DLFITLLS+G GY LLQ+R+ L L A+AEKHG RLL P NTISF +TL+ L ++ DE+ ++ +S LGAMLF+R VSGTRV+ P + KT+ G FAG+GS DA P Y+TAACA+GV EV+EFL +LD+ + +F K + K+ Sbjct: 308 IIQNIGKVYAGRASSSPILDLFITLLSMGLKGYQKLLQDRQQALENFAQRLSAVAEKHGERLLQCPSNTISFGITLDTL--ARPRDESEDETAYLESIRKPISALGAMLFSRCVSGTRVI--------------------------------PRLEQKTMGGQVFAGFGSSHDAF--PHAYMTAACAIGVHPSEVDEFLVRLDKTIHEFKKKQEKR 487
BLAST of NO05G00480 vs. NCBI_GenBank
Match: OEU20500.1 (soluble liver antigen/liver pancreas antigen [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 141.4 bits (355), Expect = 4.200e-30 Identity = 84/219 (38.36%), Postives = 124/219 (56.62%), Query Frame = 0 Query: 38 LVTRLCRMYPGRANATPLHDLFITLLSLGRSGYLSLLQERKSLLPLMRGGLRAIAEKHGGRLLSTPGNTISFAVTLNGLLCSKKGDEARNDEXXXXXXXXXLSLLGAMLFTRGVSGTRVVIPAPAYSSLHSSLSPSXXXXXXXXXXXXXXXXPHRKMKTVAGLSFAGYGSHSDARYPPGPYLTAACALGVRKEEVEEFLKKLDRAMTDFMKMRAKKGRR 257 ++ + ++Y GRA+++P+ DLFITLLS+G +GY LL+ER S+L LR +AEKHG R+L P NT+SF +TL+GL K+ DE DE ++ GAMLF+R VSGTRVV P ++K++ G F G+GS ++ P Y+TAACA+GV E+EEF +LD+ +T+F + + KK ++ Sbjct: 324 IIGEVGKVYAGRASSSPIVDLFITLLSMGMNGYKRLLKERTSVLETFPERLREVAEKHGERILVCPNNTVSFGLTLDGLARPKEVDEL--DENYTQSTAKEITSFGAMLFSRCVSGTRVV--------------------------------PRSQLKSIGGQDFIGFGSSTNEY--PHAYMTAACAIGVSIFEIEEFYVRLDKTLTEFKRKKKKKAQK 506
BLAST of NO05G00480 vs. NCBI_GenBank
Match: GAX29460.1 (O-phospho-L-seryl-tRNASec:L-selenocysteinyl-tRNA synthase [Fistulifera solaris]) HSP 1 Score: 138.7 bits (348), Expect = 2.700e-29 Identity = 83/216 (38.43%), Postives = 120/216 (55.56%), Query Frame = 0 Query: 38 LVTRLCRMYPGRANATPLHDLFITLLSLGRSGYLSLLQERKSLLPLMRGGLRAIAEKHGGRLLSTPGNTISFAVTLNGLLCSKKGDEARNDEXXXXXXXXXLSLLGAMLFTRGVSGTRVVIPAPAYSSLHSSLSPSXXXXXXXXXXXXXXXXPHRKMKTVAGLSFAGYGSHSDARYPPGPYLTAACALGVRKEEVEEFLKKLDRAMTDFMKMRAKK 254 ++ + ++Y GRA+++P+ DLFITLLS+G GY LLQ+R+ L L A+AEKHG RLL P NTISF +TL+ L ++ +E+ ++ +S LGAMLF+R VSGTRV+ P + KT+ G AG+GS +A P Y+TAACA+GV EV+EFL +LD+ + +F K + K+ Sbjct: 305 IIQNIGKVYAGRASSSPILDLFITLLSMGMKGYQKLLQDRQQALESFAQRLSAVAEKHGERLLQCPSNTISFGITLDSL--ARPRNESEDEISYLESIRKPISALGAMLFSRCVSGTRVI--------------------------------PRLEQKTLGGHVLAGFGSSHEAY--PHAYMTAACAIGVHPSEVDEFLVRLDKTIHEFKKKQQKR 484
BLAST of NO05G00480 vs. NCBI_GenBank
Match: OQR96216.1 (o-phosphoseryl-tRNA(Sec) selenium transferase-like [Achlya hypogyna]) HSP 1 Score: 131.3 bits (329), Expect = 4.300e-27 Identity = 79/208 (37.98%), Postives = 112/208 (53.85%), Query Frame = 0 Query: 39 VTRLCRMYPGRANATPLHDLFITLLSLGRSGYLSLLQERKSLLPLMRGGLRAIAEKHGGRLLSTPGNTISFAVTLNGLLCSKKGDEARNDEXXXXXXXXXLSLLGAMLFTRGVSGTRVVIPAPAYSSLHSSLSPSXXXXXXXXXXXXXXXXPHRKMKTVAGLSFAGYGSHSDARYPPGPYLTAACALGVRKEEVEEFLKKLDRAMTDF 247 V + ++YPGRA+ P DLFIT+L LGR+GY +LL RK+L+P R L +A+ HG RLL T N ISF +++ G C GD + LG+MLF+RGVSGTR+V R +AG +F G+G+H+DA PGPYL+AACA+G+ K +V+ F+ +LD+ + +F Sbjct: 310 VQEIGKLYPGRASNAPALDLFITMLHLGRAGYKALLDARKALVPYFRDELAKVADAHGERLLVTRHNDISFCISV-GRCCGASGD---------------ATFLGSMLFSRGVSGTRIV--------------------------------TGRAEAKIAGYAFRGFGAHADAY--PGPYLSAACAIGMTKADVDLFVGRLDKTLREF 467
BLAST of NO05G00480 vs. NCBI_GenBank
Match: XP_004333083.1 (Ophosphoseryl-tRNA(Sec) selenium transferase [Acanthamoeba castellanii str. Neff] >ELR11070.1 Ophosphoseryl-tRNA(Sec) selenium transferase [Acanthamoeba castellanii str. Neff]) HSP 1 Score: 131.0 bits (328), Expect = 5.600e-27 Identity = 83/215 (38.60%), Postives = 115/215 (53.49%), Query Frame = 0 Query: 39 VTRLCRMYPGRANATPLHDLFITLLSLGRSGYLSLLQERKSLLPLMRGGLRAIAEKHGGRLLSTPGNTISFAVTLNGLLCSKKGDEARNDEXXXXXXXXXLSLLGAMLFTRGVSGTRVVIPAPAYSSLHSSLSPSXXXXXXXXXXXXXXXXPHRKMKTVAGLSFAGYGSHSDARYPPGPYLTAACALGVRKEEVEEFLKKLDRAMTDFMKMRAKK 254 + L + YPGRA+A+PL DLFITLLSLG +G+ +LL+ERK L + +AEKHG R L+TP N ISF +TL L K+G ++LG+MLF+R SGTR+V ++ K VAG++F GYG+H D+ P Y TAACALG+ + EV+ FL +LD+ +T+ + KK Sbjct: 260 IEELNKAYPGRASASPLVDLFITLLSLGVAGWKTLLRERKELFGYFTAEMAKVAEKHGERFLATPNNPISFGMTLERLGDVKEGP----------------TMLGSMLFSRCCSGTRIV--------------------------------TGKEKKVVAGITFEGYGAHIDSY--PTAYATAACALGLTRGEVDLFLTRLDKTLTELHHQKRKK 424
BLAST of NO05G00480 vs. NCBI_GenBank
Match: KOO35236.1 (o-phosphoseryl-tRNA selenium transferase, partial [Chrysochromulina sp. CCMP291]) HSP 1 Score: 129.8 bits (325), Expect = 1.300e-26 Identity = 81/213 (38.03%), Postives = 112/213 (52.58%), Query Frame = 0 Query: 38 LVTRLCRMYPGRANATPLHDLFITLLSLGRSGYLSLLQERKSLLPLMRGGLRAIAEKHGGRLLSTPGNTISFAVTLNGLLCSKKGDEARNDEXXXXXXXXXLSLLGAMLFTRGVSGTRVVIPAPAYSSLHSSLSPSXXXXXXXXXXXXXXXXPHRKMKTVAGLSFAGYGSHSDARYPPGPYLTAACALGVRKEEVEEFLKKLDRAMTDFMKMR 251 L+ ++ YPGRA+ P+ DLFITLL LG G+ SLL+ R+ LLP+ R L A+A HG RLL TP N+IS AVTL G R+ ++ +GA L+ R +SG R+ P K K+VAG++F YGSH DA P Y TAACALG +E+++ FLK+LD+ + ++ KM+ Sbjct: 260 LIAKVSATYPGRASIAPILDLFITLLHLGADGWASLLERRQRLLPIFRERLGALAASHGERLLVTPNNSISMAVTLT------SGGGGRS-----------VTAMGAQLWVRLISGARI-------------------------------CAPDAKKKSVAGIAFTNYGSHCDAY--PVAYFTAACALGATEEDLDLFLKRLDKTLKEWKKMK 422
BLAST of NO05G00480 vs. NCBI_GenBank
Match: EJK75999.1 (hypothetical protein THAOC_02258 [Thalassiosira oceanica]) HSP 1 Score: 125.6 bits (314), Expect = 2.400e-25 Identity = 80/225 (35.56%), Postives = 121/225 (53.78%), Query Frame = 0 Query: 38 LVTRLCRMYPGRANATPLHDLFITLLSLGRSGYLSLLQERKSLLPLMRGGLRAIAEKHGGRLLSTPGNTISFAVTLNGLLCSKKGDEARNDEXXXXXXXXXLSLLGAMLFTRGVSGTRVVIPAPAYSSLHSSLSPSXXXXXXXXXXXXXXXXPHRKMKTVAGLSFAGYGSHSDARYPPGPYLTAACALGVRKEEVEEFLKKLDRAMTDFMKMRAKKGRRKKEERA 263 +V + + YPGRA+A+P+ DLFITLLS+G GY +L+ER+ L L + L IAEK G R L P NTISF +TL+ L+C + ++ + ++ G+MLFTR VSGTRVV + KT++G +F G+GS D+ Y+TAACA+G+ + E+ EF +LD+++ D+ R K +R+ ++ A Sbjct: 352 VVESISKNYPGRASASPVIDLFITLLSMGLEGYKKVLEERRRLTGLFQSQLERIAEKFGERTLKCPRNTISFGMTLDKLVC-VESEQNSDAGVALKEQNKQITKFGSMLFTRCVSGTRVV--------------------------------AKNETKTISGHTFVGFGSSHDSY--SHAYMTAACAVGLGEAEMNEFFARLDKSLKDYCAKRDKDRKRRAKKSA 541
BLAST of NO05G00480 vs. NCBI_GenBank
Match: GAY00662.1 (Hypothetical protein PINS_008531, partial [Pythium insidiosum]) HSP 1 Score: 124.4 bits (311), Expect = 5.300e-25 Identity = 79/207 (38.16%), Postives = 113/207 (54.59%), Query Frame = 0 Query: 42 LCRMYPGRANATPLHDLFITLLSLGRSGYLSLLQERKSLLPLMRGGLRAIAEKHGGRLLSTPGNTISFAVTLNGLLCSKKGDEARNDEXXXXXXXXXLSLLGAMLFTRGVSGTRVVIPAPAYSSLHSSLSPSXXXXXXXXXXXXXXXXPHRKMKTVAGLSFAGYGSHSDARYPPGPYLTAACALGVRKEEVEEFLKKLDRAMTDFMK 249 + R+YPGRA+ TP DLFITLL +GRSG+ LLQ+RK L M+ L A A + G R++ +P N IS A+TL C + D + L+ G+MLF RG+SGTRVV S L S KT+ G++FA YG+H D +YP PYL ACA+G+ ++E+++ +KKL + + ++ K Sbjct: 502 VARIYPGRASNTPSVDLFITLLQMGRSGFRRLLQQRKELFGYMKAQLEAFASEIGERVIESPQNEISVAMTL-ASFCGEDCDAKTRSK--------TLTFFGSMLFARGISGTRVV------SCLDS--------------------------KTIGGITFASYGAHYD-QYPT-PYLXFACAIGMTRDEIDQLVKKLRKTVQEWRK 665
BLAST of NO05G00480 vs. NCBI_GenBank
Match: EJK72118.1 (hypothetical protein THAOC_06386, partial [Thalassiosira oceanica]) HSP 1 Score: 124.0 bits (310), Expect = 6.900e-25 Identity = 76/209 (36.36%), Postives = 113/209 (54.07%), Query Frame = 0 Query: 38 LVTRLCRMYPGRANATPLHDLFITLLSLGRSGYLSLLQERKSLLPLMRGGLRAIAEKHGGRLLSTPGNTISFAVTLNGLLCSKKGDEARNDEXXXXXXXXXLSLLGAMLFTRGVSGTRVVIPAPAYSSLHSSLSPSXXXXXXXXXXXXXXXXPHRKMKTVAGLSFAGYGSHSDARYPPGPYLTAACALGVRKEEVEEFLKKLDRAMTDF 247 +V + + YPGRA+A+P+ DLFITLLS+G GY +L+ER+ L L + L IAEK G R L P NTISF +TL+ L+C + ++ + ++ G+MLFTR VSGTRVV + KT++G +F G+GS D+ Y+TAACA+G+ + E+ EF +LD+++ D+ Sbjct: 352 VVESISKNYPGRASASPVIDLFITLLSMGLEGYKKVLEERRRLTGLFQSQLERIAEKFGERTLKCPRNTISFGMTLDKLVC-VESEQNSDAGVALKEQNKQITKFGSMLFTRCVSGTRVV--------------------------------AKNETKTISGHTFVGFGSSHDSY--SHAYMTAACAVGLGEAEMNEFFARLDKSLKDY 525 The following BLAST results are available for this feature:
BLAST of NO05G00480 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO05G00480 ID=NO05G00480|Name=NO05G00480|organism=Nannochloropsis oceanica|type=gene|length=1043bpback to top protein sequence of NO05G00480.1 >NO05G00480.1-protein ID=NO05G00480.1-protein|Name=NO05G00480.1|organism=Nannochloropsis oceanica|type=polypeptide|length=265bpback to top Synonyms
Publications
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