NO05G00400, NO05G00400 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO05G00400 vs. NCBI_GenBank
Match: EWM28345.1 (uncharacterized protein Naga_100846g4 [Nannochloropsis gaditana]) HSP 1 Score: 139.0 bits (349), Expect = 3.200e-29 Identity = 62/84 (73.81%), Postives = 69/84 (82.14%), Query Frame = 0 Query: 328 DLSASFLINFLSGYKQFISPLLPKACRFFPTCSEYAIESIQTFGAAKGIILTVWRLLRCNPLGGRGWDPPQWPPPGWFAGGTGR 412 D S++ LINF GYK++ISPLLP+ACRFFPTCSEYAIES+Q FG AKG +LT WRLLRCNPLGGRGWDPPQ AGGTGR Sbjct: 160 DASSAILINFFRGYKRYISPLLPQACRFFPTCSEYAIESVQKFGPAKGAVLTAWRLLRCNPLGGRGWDPPQXXXXXXKAGGTGR 243
BLAST of NO05G00400 vs. NCBI_GenBank
Match: CBN78651.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 114.4 bits (285), Expect = 8.500e-22 Identity = 45/74 (60.81%), Postives = 57/74 (77.03%), Query Frame = 0 Query: 334 LINFLSGYKQFISPLLPKACRFFPTCSEYAIESIQTFGAAKGIILTVWRLLRCNPLGGRGWDPPQWPPPGWFAG 408 +I+F+ YK+ +SPL+P ACRF PTCS Y +++I+ FG KG +LT WRL+RCNP G G D PQWPPPGWFAG Sbjct: 79 MISFIKAYKKELSPLIPPACRFLPTCSVYGVQAIEKFGPTKGAVLTAWRLMRCNPFAGYGVDYPQWPPPGWFAG 152
BLAST of NO05G00400 vs. NCBI_GenBank
Match: XP_002286841.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED96482.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 112.5 bits (280), Expect = 3.200e-21 Identity = 45/77 (58.44%), Postives = 61/77 (79.22%), Query Frame = 0 Query: 331 ASFLINFLSGYKQFISPLLPKACRFFPTCSEYAIESIQTFGAAKGIILTVWRLLRCNPLGGRGWDPPQWPPPGWFAG 408 +S +IN + YKQ+ISPLLP ACRF PTCS+Y +++I+ FG +KG++LT WRL RC+P GGRG+DPP+WPP + G Sbjct: 2 SSSMINAIGFYKQWISPLLPPACRFLPTCSQYGVQAIEEFGPSKGVLLTAWRLARCSPFGGRGYDPPKWPPVAYNYG 78
BLAST of NO05G00400 vs. NCBI_GenBank
Match: OEU20797.1 (DUF37-domain-containing protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 111.3 bits (277), Expect = 7.200e-21 Identity = 43/74 (58.11%), Postives = 61/74 (82.43%), Query Frame = 0 Query: 328 DLSASFLINFLSGYKQFISPLLPKACRFFPTCSEYAIESIQTFGAAKGIILTVWRLLRCNPLGGRGWDPPQWPP 402 D+S++ +I + YK FISPLLP ACRF PTCS+Y +++I+ +G+ KG++LT WRLLRC+P GG+G+DPP+WPP Sbjct: 48 DVSSAAMIATIGIYKNFISPLLPPACRFVPTCSQYGVQAIKEYGSTKGVVLTSWRLLRCSPFGGKGYDPPKWPP 121
BLAST of NO05G00400 vs. NCBI_GenBank
Match: XP_002176802.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC51265.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 108.2 bits (269), Expect = 6.100e-20 Identity = 43/68 (63.24%), Postives = 56/68 (82.35%), Query Frame = 0 Query: 334 LINFLSGYKQFISPLLPKACRFFPTCSEYAIESIQTFGAAKGIILTVWRLLRCNPLGGRGWDPPQWPP 402 +I + YKQ ISPLLP ACRF PTCS+Y +++IQ +G+ KG ILT WRLLRC+P+GG+G+DPP+WPP Sbjct: 5 MIASIGFYKQVISPLLPPACRFVPTCSQYGVQAIQQYGSGKGAILTAWRLLRCSPIGGKGYDPPKWPP 72
BLAST of NO05G00400 vs. NCBI_GenBank
Match: XP_015697503.1 (PREDICTED: uncharacterized protein LOC102703627 isoform X1 [Oryza brachyantha] >XP_015697505.1 PREDICTED: uncharacterized protein LOC102703627 isoform X1 [Oryza brachyantha] >XP_015697506.1 PREDICTED: uncharacterized protein LOC102703627 isoform X1 [Oryza brachyantha]) HSP 1 Score: 105.5 bits (262), Expect = 3.900e-19 Identity = 43/76 (56.58%), Postives = 57/76 (75.00%), Query Frame = 0 Query: 324 EEKPDLSASFLINFLSGYKQFISPLLPKACRFFPTCSEYAIESIQTFGAAKGIILTVWRLLRCNPLGGRGWDPPQW 400 EE DL + ++ L YK+ ISPLLP +CR+ PTCSEY++++ + +G AKG ILT WRL RCNPLGG G+DPP+W Sbjct: 96 EEVSDLGVNVALSMLKFYKREISPLLPSSCRYVPTCSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGGHGYDPPRW 171
BLAST of NO05G00400 vs. NCBI_GenBank
Match: XP_015697507.1 (PREDICTED: uncharacterized protein LOC102703627 isoform X2 [Oryza brachyantha]) HSP 1 Score: 105.5 bits (262), Expect = 3.900e-19 Identity = 43/76 (56.58%), Postives = 57/76 (75.00%), Query Frame = 0 Query: 324 EEKPDLSASFLINFLSGYKQFISPLLPKACRFFPTCSEYAIESIQTFGAAKGIILTVWRLLRCNPLGGRGWDPPQW 400 EE DL + ++ L YK+ ISPLLP +CR+ PTCSEY++++ + +G AKG ILT WRL RCNPLGG G+DPP+W Sbjct: 95 EEVSDLGVNVALSMLKFYKREISPLLPSSCRYVPTCSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGGHGYDPPRW 170
BLAST of NO05G00400 vs. NCBI_GenBank
Match: XP_015697508.1 (PREDICTED: uncharacterized protein LOC102703627 isoform X3 [Oryza brachyantha]) HSP 1 Score: 105.5 bits (262), Expect = 3.900e-19 Identity = 43/76 (56.58%), Postives = 57/76 (75.00%), Query Frame = 0 Query: 324 EEKPDLSASFLINFLSGYKQFISPLLPKACRFFPTCSEYAIESIQTFGAAKGIILTVWRLLRCNPLGGRGWDPPQW 400 EE DL + ++ L YK+ ISPLLP +CR+ PTCSEY++++ + +G AKG ILT WRL RCNPLGG G+DPP+W Sbjct: 93 EEVSDLGVNVALSMLKFYKREISPLLPSSCRYVPTCSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGGHGYDPPRW 168
BLAST of NO05G00400 vs. NCBI_GenBank
Match: XP_003577203.1 (UPF0161 protein At3g09310 isoform X1 [Brachypodium distachyon] >KQJ87068.1 hypothetical protein BRADI_4g09240v3 [Brachypodium distachyon] >KQJ87069.1 hypothetical protein BRADI_4g09240v3 [Brachypodium distachyon] >KQJ87076.1 hypothetical protein BRADI_4g09240v3 [Brachypodium distachyon] >PNT62886.1 hypothetical protein BRADI_4g09240v3 [Brachypodium distachyon]) HSP 1 Score: 105.1 bits (261), Expect = 5.100e-19 Identity = 43/76 (56.58%), Postives = 57/76 (75.00%), Query Frame = 0 Query: 324 EEKPDLSASFLINFLSGYKQFISPLLPKACRFFPTCSEYAIESIQTFGAAKGIILTVWRLLRCNPLGGRGWDPPQW 400 EE DL + ++ L YK+ ISPLLP +CR+ PTCSEY++ + + +G AKG ILT WRL RCNPLGG+G+DPP+W Sbjct: 48 EEVDDLGVNVALSMLKFYKREISPLLPSSCRYVPTCSEYSMHAYKRYGVAKGTILTAWRLCRCNPLGGQGYDPPRW 123
BLAST of NO05G00400 vs. NCBI_GenBank
Match: XP_005819557.1 (hypothetical protein GUITHDRAFT_158971 [Guillardia theta CCMP2712] >EKX32577.1 hypothetical protein GUITHDRAFT_158971 [Guillardia theta CCMP2712]) HSP 1 Score: 105.1 bits (261), Expect = 5.100e-19 Identity = 43/68 (63.24%), Postives = 55/68 (80.88%), Query Frame = 0 Query: 338 LSGYKQFISPLLPKACRFFPTCSEYAIESIQTFGAAKGIILTVWRLLRCNPL----GGRGWDPPQWPP 402 L+ YK FISPLLP ACRF PTCSEY++++I G +KG++LT WRL+RCNP+ GGRG+DPP+WPP Sbjct: 9 LNSYKAFISPLLPPACRFLPTCSEYSMQAISELGPSKGLVLTAWRLIRCNPMHWGGGGRGYDPPRWPP 76 The following BLAST results are available for this feature:
BLAST of NO05G00400 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO05G00400 ID=NO05G00400|Name=NO05G00400|organism=Nannochloropsis oceanica|type=gene|length=1470bpback to top protein sequence of NO05G00400.1 >NO05G00400.1-protein ID=NO05G00400.1-protein|Name=NO05G00400.1|organism=Nannochloropsis oceanica|type=polypeptide|length=412bpback to top Synonyms
Publications
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