NO05G00370, NO05G00370 (gene) Nannochloropsis oceanica

Overview
NameNO05G00370
Unique NameNO05G00370
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2272
Alignment locationchr5:142775..145046 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:142775..145046 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO05G00370 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL087nonsL087Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL086nonsL086Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR092ncniR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR119ngnoR119Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR118ngnoR118Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003854NSK003854Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G00370.1NO05G00370.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G00370.1NO05G00370.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G00370 ID=NO05G00370|Name=NO05G00370|organism=Nannochloropsis oceanica|type=gene|length=2272bp
AAAATGGACGTGTGATAGATGGTATAGTACCTCATTAGAGGAATGAGGCA
TCGAAGGATTTGTGTGCAAGAAAGAATAGAAATTGGTTGAAGGGGGGAAG
AAATTACATTTAATCGTTCGTGTCAGTCGTAAGGCGGGCATGAAGAAGGT
GAAAAGAAGGTGAAGGGGACTTCGAGGTGGAGAGGCGAAAGGGCGAATCA
GTCGAAGGAGAAACACATGGTTTGAAAGAGTCAGAGAAATTAATTATAAA
GGGCGAATGAATATGAGGGTTTGTGGGCATGTGAACATTGATTCATCAGC
AGGAATGGGGGAATAGGGAGAGAGGAGCTTGTACTCAGTGAGCATCCAGT
GTGTCCGTGGATAAATAGCATACACCCTGCTAAAGTATAAGCCATCCGTG
GTTAGCAAGTGTGAGTACAACGCAAAAGCGGCATAAAGTAAAAGGGGAGA
GGCCGTCTAAGTCGACACTCAAAGTAAGTAATCAACCAGCAGAAGTTTTT
ACACAATACCGGTTTTCATATCATGAATCGTCTTCACACCATCAATGGAT
GCACAAATGCGGCGGTAAAGTGTGAATGGCCCATGCAAGTGCTACCTTGG
TACGCCATAATTTTAGGATTGTAGGAAACTCCAAGAAAGATTATGAAGTC
CTTCTGGCCATACGGCGATGATTTGGGGGCCAGCCTGCAAAATTTTTGAC
ACCTCCCTCTTACATACCACAGCCATGACACATGCAACGTGCGTCTATGC
CTTTGGTCCACCTATCTTCGCTAAAGCTATGTGCTTTACCGGTTTGCACG
CACACGTCCGTTTGGCCCGGGGTTGGCCCAACCACGAGAGAAAAAGGATC
GCTCGCTTGGGGGCGTAGCCAGCAAGAAAGACAGGAAGGAAGCATGTCCT
CAATCCAACCACCGTCACTCTACCTTGTCATGGAAACCCACACGGCACCA
CACAATACACAATCACTCTTACAGGGGCCTTCCTGGCCTGGGCTCCGCCG
TGGCCTGGTTACCTTGCTGCTCCTTCTATCTTAGCTCCTTGCCTCCAGCA
ATAGTAGCCATGCCCGGTGTCATTCTCGCCCCTCCTCCCCCGTCCTCCCA
AACACGCCTGGCTCGCGCGTCAACCGCCACCCAGCCCTTGAGCGTTCCCT
CGAATAATAACAAGCCTCGGGGGACCGGGCACCATCACGGTCACCGGCAC
TCCTCCTCTCCCTCTGATCACTACTCCGGCTCTCCCGGTCACGGCGGAAT
GGGTTCGTTGATTCGTCTCGCGCAAGTCATGTTCGAGCACTGGCAGAACA
AGAATGCGCCATCCTCGTATTCTTCCTCTGCCCTTCCGTCCACCCCACCG
AAAACTATGGGTGGGGGAGGAACGCGCATTCCTCCGGGGTCTGCTGGCCG
GGTTGGTGCGGGAGGAGGGGAAAGGAAGAAAAAGAGTGTTTTGGGGGCAG
CAGGTGCATCAGAAGGAGGAGGAGGCAGAGGGGCGGGCAAGAAGGCGTTA
GGTCCTGCCCTTCCGCCCCGTCCTCGTTCCAAGAGTGAGGGGCATACGCC
TGTCCCTTCCACTGCTGCTGCTGCGGCCGCTGCTGCCGCTGCTTCCTCCT
AGCCCGTCGGTGTCTTGGTTGAAAAAAAGAAAGAGGAAAAAGCATGGAAG
CGAGGAATGAATAGAGGAGTACTCTTCATGGTCAGTCCCTTTCATGTGGA
GAGGGAAAGGGAAGAGATAAGGAGAAGAGTTAGGGGCGCGAGACTGAGCA
GTATGACGAAAAGGAGTGTGAAGGCGGTGGTCGACAAACACAAAGAAAAA
GATTTGTAGTAAGGTGAATCAAAATCAAGACAAAAGTCTATGTCACGACC
CGATGCATCGAGGAGGAAGGAAGGGAGGAAGGAAAGGGGATGGGCAGGGG
GTTGGCAGGTTCTTCAGGAAAGTAGGAAGGGAGGAAGCGCAGGCCTTGGT
CTCACTGTACAGTACAAGATGATGAGGAGGAGGTCGAGTAGTATAAGTTG
TTAGTTGTGGAGTCGGTGGGATTGTGGTTGTGCTTGTGGACGATCATTTG
CTTGTTTGTGGGTTAAGTTGTCCTCTATCCCTCTCCTGGAAGTGGTGGTA
TGGTGGTATGTACATGAATATATATACGTGGTGTCCCGCTTGGAGGGCTC
TTGATTTGCTCGGCGGGAGAGAACGGAGATAGATTGGGCGGCAACCCACT
ATAACCACCATATCCGGTGCTACCACCTGTTTCAAACACACAAAACAGAC
CAACAATCGACAGCACTGTGAT
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protein sequence of NO05G00370.1

>NO05G00370.1-protein ID=NO05G00370.1-protein|Name=NO05G00370.1|organism=Nannochloropsis oceanica|type=polypeptide|length=181bp
MPGVILAPPPPSSQTRLARASTATQPLSVPSNNNKPRGTGHHHGHRHSSS
PSDHYSGSPGHGGMGSLIRLAQVMFEHWQNKNAPSSYSSSALPSTPPKTM
GGGGTRIPPGSAGRVGAGGGERKKKSVLGAAGASEGGGGRGAGKKALGPA
LPPRPRSKSEGHTPVPSTAAAAAAAAAASS*
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Synonyms
Publications