NO05G00340, NO05G00340 (gene) Nannochloropsis oceanica

Overview
NameNO05G00340
Unique NameNO05G00340
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2464
Alignment locationchr5:136886..139349 +

Link to JBrowse

Properties
Property NameValue
DescriptionMetal ion transporter family
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:136886..139349 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Homology
BLAST of NO05G00340 vs. NCBI_GenBank
Match: EWM22642.1 (metal ion transporter family [Nannochloropsis gaditana])

HSP 1 Score: 153.7 bits (387), Expect = 1.700e-33
Identity = 123/290 (42.41%), Postives = 160/290 (55.17%), Query Frame = 0
Query:  252 FEFVALEAVLLTMLAFLQSKVDFLLPRIQKNNKLLMRTSTLNTVHQDTLRQLKNKVALYQNKARSLHKTLLALLEDEHDLRFLFLTRLVTPPPLXXXXXXXXRRPRAKSLPVGLEGVREDGREGGKEDEAGNNGKRQQLEQYCNTCEDGIGASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEATDLLECYLEDLYAVIVRWELIKEDMQNTEEYYLMKLDLARNRLLTYGTVFALVNMMFAFGSLVAGMFGMNLNNGLDEDSGSPVSHQSFIRVTTGVGSLIVFSVVVV 542
            FEF+ALEAVL+T+    +SK+  L P I KN K L+  +TLN+ HQDTLRQLK+KV   Q K RSLHKT++ LL+DE  L+ L           XXXXXXXX           L   +++     +E    +  +   L  +      G G S                             EA  LLE +L D   +I++WELIKEDMQNTE Y  +KLD+ARN+LLT GT+FALVN+ FAFG+L++G+FGMNL NG+   SGSP S   F+    G+ S IV  + VV
Sbjct:   13 FEFLALEAVLMTINDHFKSKLKDLRPHIIKNGKALLGNATLNSEHQDTLRQLKSKVTTCQAKVRSLHKTVVDLLDDEEHLQMLH--XXXXXXXXXXXXXXXXXXXXXXXXXXNLASAQKNEYHQQQEWRFRDTHETAMLGSFEGGRTRGRGCS---------IGGETDQQLAGVLMDAEDSDEAEILLESFLGDFNEMIMKWELIKEDMQNTENYVQVKLDMARNKLLTIGTLFALVNVCFAFGALISGIFGMNLFNGVSVGSGSPNSFPFFV----GIVSFIVILMTVV 287          
BLAST of NO05G00340 vs. NCBI_GenBank
Match: POM69629.1 (CorA Metal Ion Transporter (MIT) Family [Phytophthora palmivora var. palmivora])

HSP 1 Score: 95.5 bits (236), Expect = 5.500e-16
Identity = 94/388 (24.23%), Postives = 164/388 (42.27%), Query Frame = 0
Query:  128 VGMLNVRDLRRLITGLDSESTKNKEMSISVRKHTIVLNLDELRCLIFWDRLIVIVPEGADPDCYGRLEENLAWLSLTQKKAFDEVGRKGKVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGFEFVALEAVLLTMLAFLQSKVDFLLPRIQKNNKLLMRTSTLNTVHQDTLRQLKNKVALYQNKARSLHKTLLALLEDEHDLRFLFLTRLVTPPPLXXXXXXXXRRPRAKSLPVGLEGVREDGREGGKEDEAGNNGKRQQLEQYCNTCEDGIGASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEATDLLECYLEDLYAVIVRWELIKEDMQNTEEYYLMKLDLARNRLLTYGTVFALVNMMFAFGSLVAGMFGMNLNNGLDEDSG 516
            V  ++ RD+RR    +++  + + E SI +RK  I+++ D LR ++  D+ +V VP+GAD           + LS+  K+ F +  R+   +                                +EF ALEA+L T+  + Q+  D L P +      L++   L++   +TLR+ KN +  ++++   + + L+ LL++E DLR L+LT+L   P L                                            ++ Y    E                                   EA  L+E YL+D+++   + +L++  + NTE   ++KLD  RN LL    VF+LV +  + G+L+AG+FGMNL +G++E  G
Sbjct:  150 VQRVHARDIRR----MENAFSVSNEPSIIIRKQAILISADPLRAIVLRDQCLVYVPDGAD-----------SLLSIL-KEQFSQTSRENAEDP-------------------------------YEFRALEALLATLARYFQADYDKLSPVVVSALDRLVQ-GNLHSRELETLREFKNTMNEFESQVDGVRRVLMELLDNEEDLRLLYLTKLYEDPSLL-------------------------------------------MDLYSFDSE-----------------------------------EAEVLIETYLQDIFSTRTKADLMQHRITNTESLVMLKLDSMRNYLLRVDLVFSLVTISLSVGTLLAGVFGMNLASGVEEAWG 411          
BLAST of NO05G00340 vs. NCBI_GenBank
Match: OWZ23300.1 (CorA Metal Ion Transporter [Phytophthora megakarya])

HSP 1 Score: 92.4 bits (228), Expect = 4.600e-15
Identity = 92/388 (23.71%), Postives = 164/388 (42.27%), Query Frame = 0
Query:  128 VGMLNVRDLRRLITGLDSESTKNKEMSISVRKHTIVLNLDELRCLIFWDRLIVIVPEGADPDCYGRLEENLAWLSLTQKKAFDEVGRKGKVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGFEFVALEAVLLTMLAFLQSKVDFLLPRIQKNNKLLMRTSTLNTVHQDTLRQLKNKVALYQNKARSLHKTLLALLEDEHDLRFLFLTRLVTPPPLXXXXXXXXRRPRAKSLPVGLEGVREDGREGGKEDEAGNNGKRQQLEQYCNTCEDGIGASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEATDLLECYLEDLYAVIVRWELIKEDMQNTEEYYLMKLDLARNRLLTYGTVFALVNMMFAFGSLVAGMFGMNLNNGLDEDSG 516
            V  ++ RD+RR    +++  + + E SI +RK  I+++ D LR ++  D+ +V VP+GAD           + LS+  K+ F +  R+   +                                +EF ALEA+L T+  + Q+  + L P +      L++   L++   +TLR+ KN +  ++++   + + L+ LL++E DLR L+LT+L   P L                                            ++ Y    E                                   EA  L+E YL+D+++   + +L++  + NTE   ++KLD  RN LL    VF+LV +  + G+L+AG+FGMNL +G+++  G
Sbjct:  137 VQRVHARDIRR----MENAFSVSNEPSIIIRKQAILISADPLRAIVLRDQCLVYVPDGAD-----------SLLSIL-KEQFSQTSRENAEDP-------------------------------YEFRALEALLATLARYFQADYEKLSPVVVSALDRLVQ-GDLHSRELETLREFKNTMNEFESQVDGVRRVLMELLDNEEDLRLLYLTKLYEDPSLL-------------------------------------------MDLYSFDSE-----------------------------------EAEVLIETYLQDIFSTRTKADLMQHRITNTESLVMLKLDSMRNYLLRVDLVFSLVTISLSVGTLLAGVFGMNLASGVEDAWG 398          
BLAST of NO05G00340 vs. NCBI_GenBank
Match: ETI49937.1 (hypothetical protein, variant [Phytophthora parasitica P1569] >ETK89815.1 hypothetical protein, variant [Phytophthora parasitica] >ETL43214.1 hypothetical protein, variant [Phytophthora parasitica] >ETL96404.1 hypothetical protein, variant [Phytophthora parasitica] >ETM49559.1 hypothetical protein, variant [Phytophthora parasitica] >ETO78685.1 hypothetical protein, variant [Phytophthora parasitica P1976] >ETP19705.1 hypothetical protein, variant [Phytophthora parasitica CJ01A1] >ETP47639.1 hypothetical protein, variant [Phytophthora parasitica P10297])

HSP 1 Score: 90.1 bits (222), Expect = 2.300e-14
Identity = 93/388 (23.97%), Postives = 162/388 (41.75%), Query Frame = 0
Query:  128 VGMLNVRDLRRLITGLDSESTKNKEMSISVRKHTIVLNLDELRCLIFWDRLIVIVPEGADPDCYGRLEENLAWLSLTQKKAFDEVGRKGKVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGFEFVALEAVLLTMLAFLQSKVDFLLPRIQKNNKLLMRTSTLNTVHQDTLRQLKNKVALYQNKARSLHKTLLALLEDEHDLRFLFLTRLVTPPPLXXXXXXXXRRPRAKSLPVGLEGVREDGREGGKEDEAGNNGKRQQLEQYCNTCEDGIGASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEATDLLECYLEDLYAVIVRWELIKEDMQNTEEYYLMKLDLARNRLLTYGTVFALVNMMFAFGSLVAGMFGMNLNNGLDEDSG 516
            V  ++ RD+RR    +++  + + E +I +RK  I+++ D LR ++  D  +V VP+GAD           + LS+  K+ F +  R+   +                                +EF ALEA+L T+  + QS  + L P +      L++   L++   +TLR+ KN +  ++++   + + L+ LL++E DLR L+LT+L   P L                                             + Y    E                                   EA  L+E YL+D+++   + +L++  + NTE   ++KLD  RN LL    VF+LV +  + G+L+AG+FGMNL +G++E  G
Sbjct:  148 VQRVHARDIRR----MENAFSVSNEPAIIIRKQAILISADPLRAIVMRDVCLVYVPDGAD-----------SLLSIL-KEQFSQAARENAEDP-------------------------------YEFRALEALLATLARYFQSDYEKLSPIVISALDRLVQ-GNLHSRELETLREFKNTMNEFESQVDGVRRVLMELLDNEEDLRLLYLTKLYEDPSLL-------------------------------------------TDLYSFDSE-----------------------------------EAEVLIENYLQDIFSTRTKADLMQHRITNTESLVMLKLDSMRNYLLRVDLVFSLVTISLSVGTLLAGVFGMNLASGVEEAWG 409          
BLAST of NO05G00340 vs. NCBI_GenBank
Match: XP_008891872.1 (hypothetical protein, variant [Phytophthora parasitica INRA-310] >ETN22639.1 hypothetical protein, variant [Phytophthora parasitica INRA-310])

HSP 1 Score: 90.1 bits (222), Expect = 2.300e-14
Identity = 93/388 (23.97%), Postives = 162/388 (41.75%), Query Frame = 0
Query:  128 VGMLNVRDLRRLITGLDSESTKNKEMSISVRKHTIVLNLDELRCLIFWDRLIVIVPEGADPDCYGRLEENLAWLSLTQKKAFDEVGRKGKVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGFEFVALEAVLLTMLAFLQSKVDFLLPRIQKNNKLLMRTSTLNTVHQDTLRQLKNKVALYQNKARSLHKTLLALLEDEHDLRFLFLTRLVTPPPLXXXXXXXXRRPRAKSLPVGLEGVREDGREGGKEDEAGNNGKRQQLEQYCNTCEDGIGASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEATDLLECYLEDLYAVIVRWELIKEDMQNTEEYYLMKLDLARNRLLTYGTVFALVNMMFAFGSLVAGMFGMNLNNGLDEDSG 516
            V  ++ RD+RR    +++  + + E +I +RK  I+++ D LR ++  D  +V VP+GAD           + LS+  K+ F +  R+   +                                +EF ALEA+L T+  + QS  + L P +      L++   L++   +TLR+ KN +  ++++   + + L+ LL++E DLR L+LT+L   P L                                             + Y    E                                   EA  L+E YL+D+++   + +L++  + NTE   ++KLD  RN LL    VF+LV +  + G+L+AG+FGMNL +G++E  G
Sbjct:  148 VQRVHARDIRR----MENAFSVSNEPAIIIRKQAILISADPLRAIVMRDVCLVYVPDGAD-----------SLLSIL-KEQFSQAARENAEDP-------------------------------YEFRALEALLATLARYFQSDYEKLSPIVISALDRLVQ-GNLHSRELETLREFKNTMNEFESQVDGVRRVLMELLDNEEDLRLLYLTKLYEDPSLL-------------------------------------------TDLYSFDSE-----------------------------------EAEVLIENYLQDIFSTRTKADLMQHRITNTESLVMLKLDSMRNYLLRVDLVFSLVTISLSVGTLLAGVFGMNLASGVEEAWG 409          
BLAST of NO05G00340 vs. NCBI_GenBank
Match: XP_009519192.1 (hypothetical protein PHYSODRAFT_482785 [Phytophthora sojae] >EGZ23904.1 hypothetical protein PHYSODRAFT_482785 [Phytophthora sojae])

HSP 1 Score: 89.4 bits (220), Expect = 3.900e-14
Identity = 93/388 (23.97%), Postives = 162/388 (41.75%), Query Frame = 0
Query:  128 VGMLNVRDLRRLITGLDSESTKNKEMSISVRKHTIVLNLDELRCLIFWDRLIVIVPEGADPDCYGRLEENLAWLSLTQKKAFDEVGRKGKVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGFEFVALEAVLLTMLAFLQSKVDFLLPRIQKNNKLLMRTSTLNTVHQDTLRQLKNKVALYQNKARSLHKTLLALLEDEHDLRFLFLTRLVTPPPLXXXXXXXXRRPRAKSLPVGLEGVREDGREGGKEDEAGNNGKRQQLEQYCNTCEDGIGASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEATDLLECYLEDLYAVIVRWELIKEDMQNTEEYYLMKLDLARNRLLTYGTVFALVNMMFAFGSLVAGMFGMNLNNGLDEDSG 516
            V  ++ RD+RR    +++  + + E SI +RK  I+++ D LR ++  D  +V VP+GAD           + LS+  K  F +  R+                                    FEF ALEA+L T+  + Q+  + L P +    + L++   L++   +TLR+ KN +  ++++   + + L+ LL++E DLR L+LT+L   P L                                            ++ Y    E                                   EA  L+E YL+D+++   + +L++  + NTE   ++KLD  RN LL    VF+L+ +  + G+L+AG+FGMNL +G++E  G
Sbjct:  142 VQRVHARDIRR----MENAFSVSNEPSIVIRKQAILISADPLRAIVMRDVCLVYVPDGAD-----------SLLSIL-KDQFSQTARENAESP-------------------------------FEFRALEALLATLARYFQADYEKLSPVVISALERLVQ-GNLHSRELETLREFKNTMNEFESQVDGVRRVLMELLDNEEDLRLLYLTKLHEDPSLL-------------------------------------------MDLYSFDSE-----------------------------------EAEVLIENYLQDIFSTRTQADLMQHRITNTESLVMLKLDSMRNYLLRVDLVFSLMTISLSVGTLLAGVFGMNLASGVEEAWG 403          
BLAST of NO05G00340 vs. NCBI_GenBank
Match: XP_002997910.1 (CorA Metal Ion Transporter (MIT) Family [Phytophthora infestans T30-4] >EEY67748.1 CorA Metal Ion Transporter (MIT) Family [Phytophthora infestans T30-4])

HSP 1 Score: 88.2 bits (217), Expect = 8.700e-14
Identity = 91/388 (23.45%), Postives = 163/388 (42.01%), Query Frame = 0
Query:  128 VGMLNVRDLRRLITGLDSESTKNKEMSISVRKHTIVLNLDELRCLIFWDRLIVIVPEGADPDCYGRLEENLAWLSLTQKKAFDEVGRKGKVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGFEFVALEAVLLTMLAFLQSKVDFLLPRIQKNNKLLMRTSTLNTVHQDTLRQLKNKVALYQNKARSLHKTLLALLEDEHDLRFLFLTRLVTPPPLXXXXXXXXRRPRAKSLPVGLEGVREDGREGGKEDEAGNNGKRQQLEQYCNTCEDGIGASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEATDLLECYLEDLYAVIVRWELIKEDMQNTEEYYLMKLDLARNRLLTYGTVFALVNMMFAFGSLVAGMFGMNLNNGLDEDSG 516
            V  ++ RD+RR    +++  + + E +I +RK  I+++ D LR ++  D  +V VP+GAD           + LS+  K+ F +  R+   +                                +EF ALEA+L T+  + Q+  + L P +      L++   L++   +TLR+ KN +  ++++   + + L+ LL++E DLR L+LT+L   P L                                             + Y    E                                   EA  L+E YL+D+++   + +L+++ + NTE   ++KLD  RN LL    +F+LV +  + G+L+AG+FGMNL +G++E  G
Sbjct:  136 VQRVHARDIRR----MENAFSVSNEPAIIIRKQAILISADPLRAIVMRDVCLVYVPDGAD-----------SLLSIL-KEQFTQTARENAEDP-------------------------------YEFRALEALLATLARYFQADYEKLSPIVISALDRLVQ-GNLHSRELETLREFKNTMNEFESQVDGVRRVLMELLDNEEDLRLLYLTKLHEEPSLL-------------------------------------------TDLYSFDSE-----------------------------------EAEVLIENYLQDIFSTRTKADLMQQRITNTESLVMLKLDSMRNYLLRVDLIFSLVTISLSVGTLLAGVFGMNLASGVEEAWG 397          
BLAST of NO05G00340 vs. NCBI_GenBank
Match: KUF79808.1 (CorA Metal Ion Transporter (MIT) Family [Phytophthora nicotianae])

HSP 1 Score: 88.2 bits (217), Expect = 8.700e-14
Identity = 92/388 (23.71%), Postives = 161/388 (41.49%), Query Frame = 0
Query:  128 VGMLNVRDLRRLITGLDSESTKNKEMSISVRKHTIVLNLDELRCLIFWDRLIVIVPEGADPDCYGRLEENLAWLSLTQKKAFDEVGRKGKVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGFEFVALEAVLLTMLAFLQSKVDFLLPRIQKNNKLLMRTSTLNTVHQDTLRQLKNKVALYQNKARSLHKTLLALLEDEHDLRFLFLTRLVTPPPLXXXXXXXXRRPRAKSLPVGLEGVREDGREGGKEDEAGNNGKRQQLEQYCNTCEDGIGASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEATDLLECYLEDLYAVIVRWELIKEDMQNTEEYYLMKLDLARNRLLTYGTVFALVNMMFAFGSLVAGMFGMNLNNGLDEDSG 516
            V  ++ RD+RR    +++  + + E +I +RK  I+++ D LR ++  D  +V VP+GAD           + LS+  K+ F +  R+   +                                +EF ALEA+L T+  + QS  + L P +      L++   L++   +T R+ KN +  ++++   + + L+ LL++E DLR L+LT+L   P L                                             + Y    E                                   EA  L+E YL+D+++   + +L++  + NTE   ++KLD  RN LL    VF+LV +  + G+L+AG+FGMNL +G++E  G
Sbjct:  141 VQRVHARDIRR----MENAFSVSNEPAIIIRKQAILISADPLRAIVMRDVCLVYVPDGAD-----------SLLSIL-KEQFSQAARENAEDP-------------------------------YEFRALEALLATLARYFQSDYEKLSPIVISALDRLVQ-GNLHSRELETXREFKNTMNEFESQVDGVRRVLMELLDNEEDLRLLYLTKLYEDPSLL-------------------------------------------TDLYSFDSE-----------------------------------EAEVLIENYLQDIFSTRTKADLMQHRITNTESLVMLKLDSMRNYLLRVDLVFSLVTISLSVGTLLAGVFGMNLASGVEEAWG 402          
BLAST of NO05G00340 vs. NCBI_GenBank
Match: XP_009519205.1 (hypothetical protein PHYSODRAFT_487017 [Phytophthora sojae] >EGZ23917.1 hypothetical protein PHYSODRAFT_487017 [Phytophthora sojae])

HSP 1 Score: 87.8 bits (216), Expect = 1.100e-13
Identity = 101/429 (23.54%), Postives = 170/429 (39.63%), Query Frame = 0
Query:  128 VGMLNVRDLRRL----ITGLDSESTKNKEMSISVRKHTIVLNLDELRCLIFWDRLIVIVPEGADPDCYGRLEENLAWLSLTQKKAFDEVGRKGKVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGFEFVALEAVLLTMLAFLQSKVDFLLPRIQKNNKLLMRTSTLNTVHQDTLRQLKNKVALYQNKARSLHKTLLALLEDEHDLRFLFLTRLVTPPPLXXXXXXXXRRPRAKSLPVGLEGVREDGREGGKEDEAGNNGKRQQLEQYCNTCEDGIGASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEATDLLECYLEDLYAVIVRWELIKEDMQNTEEYYLMKLDLARNRLLTYGTVFALVNMMFAFGSLVAGMFGMNLNNGLDEDSGSPVSHQSFIRVTTGVGSLIVFSVVVVVVWMQKVGMLV 553
            + +L +  L+R+    I  +++  +   E  I VRK  I+++ D LR ++  D  +V VP+GAD           A LS+ + K F E  R+                                    FEF ALEA+L T+  + QS+ + L P + +    LM+   LN+   D LR+ KN +  ++ +   + + L+ LL++E DLR L+LTRL   P L                                                                                        E   L+E YL+D+++   + EL++  + NTE   +M+LD  RN LL    +F++V +  + G+ +AG+FGMNL++GL+   G       F+ V     S+ V   +  V++ +  G+L+
Sbjct:  145 INVLTISALQRVHSRDIRKMENAFSVTNEPRIVVRKQAILISADPLRAIVLRDVCLVYVPDGAD-----------ALLSVLKAK-FIETAREDDAP--------------------------------FEFRALEALLSTLSRYFQSQYEQLSPGVVRALDSLMQ-GGLNSRELDKLREFKNAINEFEAQVDGVRRVLMVLLDNEEDLRLLYLTRLYNEPNLLSDLWSIDSE------------------------------------------------------------------------------EIEVLIENYLQDIFSTRTKAELMQHRISNTESLVMMQLDSVRNYLLGVDVIFSIVVISLSVGTFIAGVFGMNLHSGLESADG------WFLGVVILTVSIFVVMTITGVLYFKSKGVLL 444          
BLAST of NO05G00340 vs. NCBI_GenBank
Match: ETM49561.1 (hypothetical protein L914_06210 [Phytophthora parasitica])

HSP 1 Score: 86.7 bits (213), Expect = 2.500e-13
Identity = 93/388 (23.97%), Postives = 150/388 (38.66%), Query Frame = 0
Query:  128 VGMLNVRDLRRLITGLDSESTKNKEMSISVRKHTIVLNLDELRCLIFWDRLIVIVPEGADPDCYGRLEENLAWLSLTQKKAFDEVGRKGKVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGFEFVALEAVLLTMLAFLQSKVDFLLPRIQKNNKLLMRTSTLNTVHQDTLRQLKNKVALYQNKARSLHKTLLALLEDEHDLRFLFLTRLVTPPPLXXXXXXXXRRPRAKSLPVGLEGVREDGREGGKEDEAGNNGKRQQLEQYCNTCEDGIGASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEATDLLECYLEDLYAVIVRWELIKEDMQNTEEYYLMKLDLARNRLLTYGTVFALVNMMFAFGSLVAGMFGMNLNNGLDEDSG 516
            V  ++ RD+R+    +++  +   E  I  RK  I+++ D LR ++  D  +V VP+GAD           A LS+ + K F E  R                                     FEF ALEA+L T+  + QS+ D L P +      LM+   LN    + LR+ KN +  ++ +   + + L+ LL++E DLR L+LTRL   P L                                                                                        E   L+E YL+D+++   + EL++  + NTE   +M+LD  RN LL    +F++V +  + G+ +AG+FGMNL++GL+   G
Sbjct:  164 VQRVHSRDIRK----MENAFSVTNEPRIVTRKQAILISADPLRAIVLRDVCLVYVPDGAD-----------ALLSVLKSK-FAETARDDDAP--------------------------------FEFRALEALLATLSRYFQSQFDQLSPVVVSALDGLMQCG-LNARELEKLREFKNTINEFETQVDGVRRALMVLLDNEEDLRLLYLTRLYNEPNLLSDLWSIDSE------------------------------------------------------------------------------EIEVLIENYLQDIFSTRTKAELMQHRISNTESLVMMQLDSMRNYLLGVDLIFSIVVISLSIGTFIAGVFGMNLHSGLETADG 424          
The following BLAST results are available for this feature:
BLAST of NO05G00340 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM22642.11.700e-3342.41metal ion transporter family [Nannochloropsis gadi... [more]
POM69629.15.500e-1624.23CorA Metal Ion Transporter (MIT) Family [Phytophth... [more]
OWZ23300.14.600e-1523.71CorA Metal Ion Transporter [Phytophthora megakarya... [more]
ETI49937.12.300e-1423.97hypothetical protein, variant [Phytophthora parasi... [more]
XP_008891872.12.300e-1423.97hypothetical protein, variant [Phytophthora parasi... [more]
XP_009519192.13.900e-1423.97hypothetical protein PHYSODRAFT_482785 [Phytophtho... [more]
XP_002997910.18.700e-1423.45CorA Metal Ion Transporter (MIT) Family [Phytophth... [more]
KUF79808.18.700e-1423.71CorA Metal Ion Transporter (MIT) Family [Phytophth... [more]
XP_009519205.11.100e-1323.54hypothetical protein PHYSODRAFT_487017 [Phytophtho... [more]
ETM49561.12.500e-1323.97hypothetical protein L914_06210 [Phytophthora para... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL087nonsL087Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL086nonsL086Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR092ncniR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR119ngnoR119Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR118ngnoR118Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003856NSK003856Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G00340.1NO05G00340.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G00340.1NO05G00340.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G00340 ID=NO05G00340|Name=NO05G00340|organism=Nannochloropsis oceanica|type=gene|length=2464bp
ATGTTCGGAAGCAATAGCACCATCGACACCACAACAGGTGGCAGCACTGC
CTTTGGTACTGCTGCGGCTGCTGCTGCTGCATCCCTCTCCCCCCTCTCTC
CTCCAGTGCGTACTCGCTCCCGCAGCAGCAGCCTGGGAGGAATTGGAAAA
GACGGATTCCCCTCTGCTACAGCAGCAGCAACAGCAGTAACGGCAGCACC
AGGGACCGCACATACCGTTCATCGCGGGAGGCGTCGCCATCACGACTATT
CACACCTCCCGCAGCCGGCCCATGGCACCAAACGACATCATGCGTCGCCT
TCCACATCGTCCTTTCACGACGGAGGAGGAGGAGGAGGAGGAGAAGGAGA
AGGAGGAGGAGGAGGAGCAGGAGGAGGGCAGGTGGGCATGTTGAACGTGC
GGGATTTGCGACGATTGATTACAGGGCTTGACTCGGAGAGCACCAAGAAC
AAGGAGATGAGTATCAGCGTGAGGAAGCACACGATTGTTTTAAACCTGGA
TGAATTGCGGTGTTTGATTTTTTGGGATCGACTGATTGTGATCGTGCCGG
AGGGGGCGGATCCCGACTGCTACGGACGGTTGGAGGAGAATCTGGCGTGG
TTGAGTTTAACGCAAAAGAAGGCGTTTGATGAGGTGGGAAGGAAGGGCAA
GGTGGAGGAGAGGGAGGAGGAGGAGGAAGAGGAGGAGGAGGGGCCGGAGG
AGGAGGAGAAGGATGAGGAGGAAGAGGAGGAGGAGGACGAAAAGGAGGAC
GGGTTTGAGTTTGTGGCACTTGAGgtaagaatgtacggaggaaaggaagg
cgtggaggaggggaggaggggaggagggagggatggagggaggggaagat
ggaaagagggaaagagggaaagaggaaaagagggaaacagggaaagagag
agggagaatgtttgtgggatggtgagtattcctgttgttgtcgttgttcc
aatctctcctctttcccttccttcctccctccctccctccctcgttcagG
CCGTCCTCCTCACCATGCTGGCCTTCCTCCAGTCAAAGGTCGACTTTTTG
CTACCGCGGATCCAGAAGAACAACAAGCTGCTCATGCGGACGAGCACCCT
CAACACGGTGCACCAGGACACGCTAAGACAGCTCAAGAACAAGgtaggga
gggaaggaggaatggagggagggactggcttacacacacacacacccacc
cacacacacacacacccacccacacccacacacacacacacacacacaca
cacacatacacacacacacacacacacacacacactagGTGGCCCTGTAC
CAGAATAAAGCCCGTTCTCTCCACAAGACGCTTCTTGCCCTCCTCGAGGA
CGAGCACGACCTCCGTTTCCTCTTCCTTACCCGCCTCGTCACCCCTCCTC
CCCTCCCTCCCTCCCGCCCTCCCTCGTCGCGGCGACCGAGGGCCAAATCC
TTGCCTGTCGGTCTCGAGGGAGTGAGGGAGGACGGGAGGGAGGGAGGGAA
GGAGGACGAAGCGGGGAATAATGGTAAGCGCCAGCAGCTCGAGCAATACT
GCAATACATGCGAAGACGGGATTGGTGCCTCTTCCTTATCGCAACAGCAG
CAGCAGCAGCAGCAACAAGAACAGTTGCAGCAGCAGCTTCGGTCGCTCCG
ACAGCAGGAGGATGACAGTGAGGCGACGGACCTATTGGAATGTTATTTAG
AGGATCTCTACGCCGTCATTGTCCGTTGGGAGCTGATCAAGGAGgtaagg
gagggaggaggggaggaagcgagcgaacgagggagaaaggtggggttgtt
gggggaaggggaagacgtgtcagctcgagaccgactgccctctcggggca
ctgatccatcccttcctccatccctccctccccccttcctttcctccttc
cctccctgcctaagGACATGCAAAACACTGAAGAGTACTACCTGATGAAG
CTGGATCTGGCGCGAAACCGACTGCTGACGTATGGCACGGTCTTCGCCTT
GGTTAATATGATGTTCGCATTCGGCTCGCTGGTCGCGGGCATGTTCGgta
agcccctccttccctccttctctccctccgtccctccgtccctccgtccc
tccgtccctccgtccctccgtcccttccctccgtccctccgtccctccgt
ccctccgtccctccgtccctccgtccctccgtccctccgtccctcctttc
tgtcctcctcctctctttccccccctcttttctgtcttctcatgggaaaa
tccattcttctaatcatcaccccttccctcctcatcattccctccccatc
ccccccaagGGATGAACCTCAACAACGGCCTGGACGAGGACAGTGGCAGT
CCTGTCTCACATCAATCTTTCATTCGCGTCACCACGGGCGTCGGCTCCCT
TATTGTATTTTCCGTCGTGGTTGTTGTCGTCTGGATGCAAAAGGTGGGGA
TGCTGGTCAACTAG
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protein sequence of NO05G00340.1

>NO05G00340.1-protein ID=NO05G00340.1-protein|Name=NO05G00340.1|organism=Nannochloropsis oceanica|type=polypeptide|length=554bp
MFGSNSTIDTTTGGSTAFGTAAAAAAASLSPLSPPVRTRSRSSSLGGIGK
DGFPSATAAATAVTAAPGTAHTVHRGRRRHHDYSHLPQPAHGTKRHHASP
STSSFHDGGGGGGGEGEGGGGGAGGGQVGMLNVRDLRRLITGLDSESTKN
KEMSISVRKHTIVLNLDELRCLIFWDRLIVIVPEGADPDCYGRLEENLAW
LSLTQKKAFDEVGRKGKVEEREEEEEEEEEGPEEEEKDEEEEEEEDEKED
GFEFVALEAVLLTMLAFLQSKVDFLLPRIQKNNKLLMRTSTLNTVHQDTL
RQLKNKVALYQNKARSLHKTLLALLEDEHDLRFLFLTRLVTPPPLPPSRP
PSSRRPRAKSLPVGLEGVREDGREGGKEDEAGNNGKRQQLEQYCNTCEDG
IGASSLSQQQQQQQQQEQLQQQLRSLRQQEDDSEATDLLECYLEDLYAVI
VRWELIKEDMQNTEEYYLMKLDLARNRLLTYGTVFALVNMMFAFGSLVAG
MFGMNLNNGLDEDSGSPVSHQSFIRVTTGVGSLIVFSVVVVVVWMQKVGM
LVN*
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Synonyms
Publications