NO05G00320, NO05G00320 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO05G00320 vs. NCBI_GenBank
Match: XP_005853654.1 (hypothetical protein NGA_0500300 [Nannochloropsis gaditana CCMP526] >EKU22704.1 hypothetical protein NGA_0500300 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 404.4 bits (1038), Expect = 3.900e-109 Identity = 265/394 (67.26%), Postives = 294/394 (74.62%), Query Frame = 0
Query: 1 MLLALKLLVVLGVLSYGVAAVLAGGDNVVLAGFQAPLNHILRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDGSADLLLRRPRTSRKDPSLYRQKPGVHKALTRQRQQPTGATGSFFDYWGDSKLITTVDGLRTKHGEGTFWGDLNHIETRFVYHQLLPRHLLQDAQAHPDALAVEDLARLASMARHAARLYARERSSLPLRLAAGLYDGFRHLSTFGRWSWTGMSYEEVWCKYEGKIKEELRRAGREGEVGRQEMNRMVALRILQKSCETNCGFDRFAQVERAHEILLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFSSMSPSALVGKKGGMKDGNEXXXEGE---KAKAWSDKNSALLPLLAHFEKLSKSLASL 392
M LALKLLVVLG+LSYGVA VL D++ LAGFQAPLNH LRG PDG + LLRRP + D S++ PG KALTR+RQQPTGAT SFF+YWGDSKLITTVDGLRT+HG+G+FWGDLNH+ETR+VYHQLLPRHLLQDAQAHPDALAVEDLARLAS ARHAARLYARERSSLPLRLAAGLYDGFRHLSTFGRWSWTGMSYEEVWCKYE KI++EL GR G+VG++E+NRMVA RIL+KSCETN GFDRFAQVERAH+I XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX F++ AL DG E +G+ K W DK SALLPLL HFE L +++ L
Sbjct: 1 MFLALKLLVVLGILSYGVATVLT-SDHLTLAGFQAPLNHFLRG-----GRLYPATASKPSPSTSGTDPHHLPHHQPPDGGMN-LLRRPWPWQVDSSVH-TPPGALKALTRRRQQPTGATTSFFEYWGDSKLITTVDGLRTRHGQGSFWGDLNHVETRYVYHQLLPRHLLQDAQAHPDALAVEDLARLASTARHAARLYARERSSLPLRLAAGLYDGFRHLSTFGRWSWTGMSYEEVWCKYESKIQKELAEEGRAGQVGQEELNRMVAFRILEKSCETNSGFDRFAQVERAHDI-------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADFAAGQVPAL--------DGAEEKEKGKGRRKEGLWKDKGSALLPLLKHFENLGRAVPPL 371
BLAST of NO05G00320 vs. NCBI_GenBank
Match: EWM28360.1 (hypothetical protein Naga_100368g5 [Nannochloropsis gaditana]) HSP 1 Score: 396.0 bits (1016), Expect = 1.400e-106 Identity = 209/293 (71.33%), Postives = 231/293 (78.84%), Query Frame = 0
Query: 1 MLLALKLLVVLGVLSYGVAAVLAGGDNVVLAGFQAPLNHILRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDGSADLLLRRPRTSRKDPSLYRQKPGVHKALTRQRQQPTGATGSFFDYWGDSKLITTVDGLRTKHGEGTFWGDLNHIETRFVYHQLLPRHLLQDAQAHPDALAVEDLARLASMARHAARLYARERSSLPLRLAAGLYDGFRHLSTFGRWSWTGMSYEEVWCKYEGKIKEELRRAGREGEVGRQEMNRMVALRILQKSCETNCGFDRFAQVERAHEI 294
M LALKLLVVLG+LSYGVA VL D++ LAGFQAPLNH LRG PDG + LLRRP + D S++ PG KALTR+RQQPTGAT SFF+YWGDSKLITTVDGLRT+HG+G+FWGDLNH+ETR+VYHQLLPRHLLQDAQAHPDALAVEDLARLAS ARHAARLYARERSSLPLRLAAGLYDGFRHLSTFGRWSWTGMSYEEVWCKYE KI++EL GR G+VG++E+NRMVA RIL+KSCETN GFDRFAQVERAH+I
Sbjct: 1 MFLALKLLVVLGILSYGVATVLT-SDHLTLAGFQAPLNHFLRG-----GRLYPATASKPSPSTSGTDPHHLPHHQPPDGGMN-LLRRPWPWQVDSSVH-TPPGALKALTRRRQQPTGATTSFFEYWGDSKLITTVDGLRTRHGQGSFWGDLNHVETRYVYHQLLPRHLLQDAQAHPDALAVEDLARLASTARHAARLYARERSSLPLRLAAGLYDGFRHLSTFGRWSWTGMSYEEVWCKYESKIQKELAEEGRAGQVGQEELNRMVAFRILEKSCETNSGFDRFAQVERAHDI 285
BLAST of NO05G00320 vs. NCBI_GenBank
Match: CBJ29718.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 103.2 bits (256), Expect = 1.900e-18 Identity = 75/194 (38.66%), Postives = 96/194 (49.48%), Query Frame = 0
Query: 132 ITTVDGLRTKHG-EGTFWGDLNHIETRFVYHQLLPRHLLQD---AQAHPD------------------------------------ALAVEDLARLASMARHAARLYARERSSLPLRLAAGLYDGFRHLSTFGRWSWTGMSYEEVWCKYEGKIKEELRRAGREGEVGRQEMNRMVALRILQKSCETNCGFDRFA 286
+ +VD LR +G FWGDL ETR YH+LLP + D A+A D A +E+ ARLASMARHAARLY RER LP R+ A LYDG RHL G + TG ++ E+W KYE KI+ E EGE ++ + LRIL+KSC T+ F+ +
Sbjct: 139 LPSVDLLRQAYGPRRHFWGDLTPAETRRFYHELLPVSVYVDAVGAKAICDGNERPLGGGMSGGGLATVVDVANRQQGGHWEYFFGAAETLEERARLASMARHAARLYVRERCKLPSRVVAHLYDGLRHLKRHGSFRVTGETWPELWDKYERKIRSE--DPSLEGE----DLKTAICLRILEKSCSTSEMFNNLS 326
BLAST of NO05G00320 vs. NCBI_GenBank
Match: XP_005789310.1 (hypothetical protein EMIHUDRAFT_420881 [Emiliania huxleyi CCMP1516] >EOD36881.1 hypothetical protein EMIHUDRAFT_420881 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 102.8 bits (255), Expect = 2.400e-18 Identity = 67/162 (41.36%), Postives = 93/162 (57.41%), Query Frame = 0
Query: 129 SKLITTVDGLRTKHGEGTFW-GDLNHIETRFVYHQLLPRHLL--QDAQAHPDALAVEDLARLASMARHAARLYARERSSLPLRLAAGLYDGFRHLSTFGRWSWTGMSYEEVWCKYEGKIKEELRRAGREGEVGRQEMNRMVALRILQKSCETNCGFDRFAQV 288
S + TTV+ LR +HG+ W GDL+ ETR +YH+LLPR LL +++ L VE+ ARLA AR AARLYARER+ LP+ L+ + DG R L G + G+S E+++ KY K+ EG +++ RM+ L KSC +N DR V
Sbjct: 182 SYVFTTVEALRRQHGQRRHWFGDLDARETRRLYHELLPRQLLDGEESVYEEHGLPVEERARLAVAARRAARLYARERAHLPVALSCEIVDGVRTLMAQGSFQPGGLSEEQIFAKYAAKL--------GEGGGDVEQVYRMMLL----KSCASNAHVDRLMGV 331
BLAST of NO05G00320 vs. NCBI_GenBank
Match: GAX19781.1 (hypothetical protein FisN_3Hh010 [Fistulifera solaris]) HSP 1 Score: 100.9 bits (250), Expect = 9.200e-18 Identity = 63/154 (40.91%), Postives = 85/154 (55.19%), Query Frame = 0
Query: 134 TVDGLRTKHG--EGTFWGDLNHIETRFVYHQLLPRHLLQDAQAH---PDALAVEDLARLASMARHAARLYARERSSLPLRLAAGLYDGFRHLSTFGRWSWTGMSYEEVWCKYEGKIKEELRRAGREGEVGRQEMNRMVALRILQKSCETNCGFD 283
+VD LR G + WGDL+ R +Y LLP+ LL+ + + + A DLA LA AR AA+LYARERS P RLAA LYDGFR +G++ GMSYE+VW KY + E R E + + + +IL+++C TN D
Sbjct: 54 SVDALRETFGGNRNSVWGDLDASSARLLYKSLLPKALLELHRYYSHQQGSSAATDLAPLAYQARVAAKLYARERSYWPYRLAASLYDGFRQYRKYGKFQTQGMSYEQVWEKYAAALDVEASRDCEEEVIAAK-----IGQKILERACATNAMVD 202
BLAST of NO05G00320 vs. NCBI_GenBank
Match: GAX19076.1 (hypothetical protein FisN_3Lh010 [Fistulifera solaris]) HSP 1 Score: 100.5 bits (249), Expect = 1.200e-17 Identity = 70/192 (36.46%), Postives = 101/192 (52.60%), Query Frame = 0
Query: 95 PSLYRQKPGVHKALTRQRQQPTG---ATGSFFDYWGDSKLITTVDGLRTKHG--EGTFWGDLNHIETRFVYHQLLPRHLLQDAQAH---PDALAVEDLARLASMARHAARLYARERSSLPLRLAAGLYDGFRHLSTFGRWSWTGMSYEEVWCKYEGKIKEELRRAGREGEVGRQEMNRMVALRILQKSCETN 279
P LY++ + TRQ+Q+ G + W ++ +VD LR G + WGDL+ R +Y LLP+ LL+ + + + A DLA LA AR AA+LYARERS P RLAA LYDGFR +G++ GMSYE+VW KY + E + E + + + +IL+++C TN
Sbjct: 16 PELYKELQTEKE--TRQKQETEWKFLVPGQPAEAW--ARKYASVDALRETFGGNRNSVWGDLDASSARLLYKSLLPKALLELHRYYSHQQGSSAATDLAPLAYQARVAAKLYARERSYWPYRLAASLYDGFRQYRKYGKFQTQGMSYEQVWEKYAAALDVEASQDCEEDVIAAK-----IGQKILERACATN 198
BLAST of NO05G00320 vs. NCBI_GenBank
Match: XP_002183653.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC44835.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 100.1 bits (248), Expect = 1.600e-17 Identity = 62/161 (38.51%), Postives = 87/161 (54.04%), Query Frame = 0
Query: 134 TVDGLRTKHG--EGTFWGDLNHIETRFVYHQLLPRHLLQDAQAHPDALAVEDLARLASMARHAARLYARERSSLPLRLAAGLYDGFRHLSTFGRWSWTGMSYEEVWCKYEGKIKEELRRAGREGEVGRQE-MNRMVALRILQKSCETNCGFDRFAQVERAH 292
+V+ LR G FWGDL+ TR +Y LLP+ LL + H + +DLA LA AR AA+LYARERS + LR+ + + DG R +G++ TGMSY +VW KY I E+ R+E + + L+IL+ SC +N DR +H
Sbjct: 253 SVEALRATFGVNRNGFWGDLDADRTRRLYKTLLPKALL---ELHAMGVQAQDLAPLAYRARVAAKLYARERSYVTLRIGSHMLDGIRTWQRYGQFDVTGMSYTQVWEKYAKAILEDADEDNESHAALREEDVTAQICLKILESSCRSNTMIDRLCLASGSH 410
BLAST of NO05G00320 vs. NCBI_GenBank
Match: XP_002176187.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC42840.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 99.8 bits (247), Expect = 2.100e-17 Identity = 62/161 (38.51%), Postives = 87/161 (54.04%), Query Frame = 0
Query: 134 TVDGLRTKHG--EGTFWGDLNHIETRFVYHQLLPRHLLQDAQAHPDALAVEDLARLASMARHAARLYARERSSLPLRLAAGLYDGFRHLSTFGRWSWTGMSYEEVWCKYEGKIKEELRRAGREGEVGRQE-MNRMVALRILQKSCETNCGFDRFAQVERAH 292
+V+ LR G FWGDL+ TR +Y LLP+ LL + H + +DLA LA AR AA+LYARERS + LR+ + + DG R +G++ TGMSY +VW KY I E+ R+E + + L+IL+ SC +N DR +H
Sbjct: 267 SVEALRATFGVNRNGFWGDLDADRTRRLYKTLLPKALL---ELHAMGVQAQDLAPLAYRARVAAKLYARERSYVTLRIGSHMLDGIRTWQRYGQFDVTGMSYTQVWEKYAKAILEDADEDDESHAALREEDVTAQICLKILESSCRSNTMIDRLCLASGSH 424
BLAST of NO05G00320 vs. NCBI_GenBank
Match: XP_002176188.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC42841.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 99.8 bits (247), Expect = 2.100e-17 Identity = 62/161 (38.51%), Postives = 87/161 (54.04%), Query Frame = 0
Query: 134 TVDGLRTKHG--EGTFWGDLNHIETRFVYHQLLPRHLLQDAQAHPDALAVEDLARLASMARHAARLYARERSSLPLRLAAGLYDGFRHLSTFGRWSWTGMSYEEVWCKYEGKIKEELRRAGREGEVGRQE-MNRMVALRILQKSCETNCGFDRFAQVERAH 292
+V+ LR G FWGDL+ TR +Y LLP+ LL + H + +DLA LA AR AA+LYARERS + LR+ + + DG R +G++ TGMSY +VW KY I E+ R+E + + L+IL+ SC +N DR +H
Sbjct: 90 SVEALRATFGVNRNGFWGDLDADRTRRLYKTLLPKALL---ELHAMGVQAQDLAPLAYRARVAAKLYARERSYVTLRIGSHMLDGIRTWQRYGQFDVTGMSYTQVWEKYAKAILEDADEDDESHAALREEDVTAQICLKILESSCRSNTMIDRLCLASGSH 247
BLAST of NO05G00320 vs. NCBI_GenBank
Match: XP_002292061.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED90912.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 98.2 bits (243), Expect = 6.000e-17 Identity = 65/179 (36.31%), Postives = 94/179 (52.51%), Query Frame = 0
Query: 133 TTVDGLRTKHG--EGTFWGDLNHIETRFVYHQLLPRHLLQDAQAHPDALA-VEDLARLASMARHAARLYARERSSLPLRLAAGLYDGFRHLSTFGRWSWTGMSYEEVWCKYEGKIKEE--LRRAGREG-----------------------EVGRQEMNRMVALRILQKSCETNCGFDR 284
T+V LR+ G + WGD + TR +YH L+PR LL H L+ V++LA LA AR AA+ YARERS LP R+ + +YDGFR +G+W GM++E+VW KYE +I E + G EG ++ +++ + LRIL++S TN D+
Sbjct: 283 TSVSTLRSTFGKNKNRLWGDFDPATTRKLYHTLIPRALL---ALHDMGLSNVDELAPLAYQARVAAKKYARERSRLPGRIGSMMYDGFRQWRRYGKWETNGMTWEQVWRKYEDQILREAMMESGGSEGGNTGALEGFPGLDLEEEGMFENADLDDEQLTARICLRILERSVVTNEAIDK 458 The following BLAST results are available for this feature:
BLAST of NO05G00320 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 13
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO05G00320 ID=NO05G00320|Name=NO05G00320|organism=Nannochloropsis oceanica|type=gene|length=6336bpback to top protein sequence of NO05G00320.1 >NO05G00320.1-protein ID=NO05G00320.1-protein|Name=NO05G00320.1|organism=Nannochloropsis oceanica|type=polypeptide|length=393bpback to top Synonyms
Publications
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