NO05G00250, NO05G00250 (gene) Nannochloropsis oceanica

Overview
NameNO05G00250
Unique NameNO05G00250
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2433
Alignment locationchr5:106504..108936 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:106504..108936 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO05G00250 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL087nonsL087Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL086nonsL086Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR119ngnoR119Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR118ngnoR118Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G00250.1NO05G00250.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G00250.1NO05G00250.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G00250 ID=NO05G00250|Name=NO05G00250|organism=Nannochloropsis oceanica|type=gene|length=2433bp
ATGCCACTTCTTATTGCGGTACCGCCATCTCCAACGGATCCAATGTCAGC
CGGGGGAACGCCAGAAGTCGACTCTCATGCTTCAGCCTCAGTGGCCGATG
CGCCCCGACATGCACACTTCTCCTCGGGCAGCGGGCCCTCCTCCTCCTTC
ATCTCTTCTTTACATGAGGCTGGCGCCAATTATCATCCCCCACGGGAATC
GAGGAGCTCATTACTCGGCAAGAGACGGCATTACTACTTTGAAAGTGATA
GCGACAGCGACGACGATAGCGAGGAGGAGGAGGGAGAGGAGGAGGGAGAG
GAGGAGGAGGAAGAGGATGCGGACGACGCGGGTTTGGAGGGTGAGGCACG
GGAGGAGGAAGAGGGAGTGAAGGAAGACAGCGGCCTACTTCACAGCCAAA
GCTCTGGGCTAGCCAGGTCGAAGAAGCGTAAAAATGAGAGTGAAGGGGGG
AAAGAGGAGGAGGAGGAGGAGGGTCACTCCCCTGCCGTTGGCTCTCGCAA
GCAGCCTCGGACCTACAAGGAATATATAAGATCCCGCACGGTGTCCACGT
CCACCACCACAACCACTGCCTCCTCCTCCTCATCCTCATCCTCGTCCTCC
TCGTCCTCCTCTTCGTCCTCCTCCTCTTCTTCCTCTCCCCCGGCCTATGC
GTCTCCGTCAAGTGCAAGTGCCACCAGGGTGTTCCGCCGTGGTGGCGGCC
CTGGGGCATTACCCCCCCCTCTTTCCCCGCCTCACCGCCTCGTTCTCCCT
CCACCCCAGCATGCGACTTTGACTGGACCCGTCACTTCGGCAGCAGCAGC
AGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCTGCAGCAGCAG
CAACAACAGGAGGAGGAAGGGGGGGAGGAAGGAGTAGAGGATCCATGCCC
TCCTCCTTATCCGCTTCCTCTTTGACACCCGGCGACGAGATGACTACCAC
CAGCAACAACTTGAGCAGCGGAGCTGCTGCTGCTGTTACTGGAACTGCTG
GTACTGCTTCTACTAAAACCCGCCGCCTGAGAGTGTTCGAACCGCCCTCC
TCCTCCGCCTCCCTTCGTCTGCGTCAACTCCGAGAGCAACGAGGCAGTAC
CACCACCACCACCACCACCACTGCTGCTGCCACGGCTGCTGCCAGCACTG
CGGGTGCAGCGTCGTTGGCGGAAATGTCAACGCGCACTGATCCCACTATT
GCTGCTGCTGCTGCTGCTGCAGGCGCATCTTTTCGAGCTGCCGGGGGCAC
GCGTGAATCCCTTTCCTCCTTTTCCCGCATTGGTCCTGCTGCAGCAGCTG
CTTCTGCTGACCGTCGGTTGGTGAGGAGCACAGTTGTAGGGGTTTCCTCG
GGTTCATCCACTCCCTCTGAAGAGGAGGAGGAAGAGGATGATAGTGATGG
TGACGAGGACGAGGACGAGGACGACTGGAGACAAGGGCCGGCACGCAGTT
TACACGATCCTGCGTTGTTTTTGTCCTTGGGAAGAGGAGGGCGGCGTTTG
CCCCCTCCTTCCCAGTCGCGCCTGCTGCTACAGCAGCAACAGCAGCAGCA
GCTGCAGCAGTTACGGCGGGCGAGGCGTCATCGTTACTGGCCTAACGATG
ATGATGATGAAGGAGATGATCTGGAAGGGATGCGAAGAGAGGTGGACGAG
GAGGAGGAAGAGGAGGACTTGTGGGCTATGGCCGTCGGTCGCAGTCGCCA
CAACAACAGCAACAACAGCAACAACAACAACAACAACAACAACAACAACA
ACAACAACAACCACAACAACAACAACAACAACAACAACAACAATAACAAT
AATACCAACAGCAGCAGAACAAGCCGCAGAGGCAGCAGCAGCAGCAGCAG
CAGTAGCAACAGCAGCTTCCTGCTTCGACAGCCGGCACGTCGGATCCCTG
CCCCTGCCCCTTCCGCAGCCCCGCCCTCTCTCCCGCCCTCCCGCCCTTCC
TCGTACCGCCCTCCCTCGTCCCCTCCCACGGCATCCTCTCTCTTGGGGAT
TGACATGCGTCTGCCCCCACCGACGAGGAGGAGGGAGGAAGAGAGGGAGG
GAGGGGAAGAGGGGGAGGAGTCCATGGTGATGGACGATGTTGTCTCGCGA
TTGTTGGGGTATGGAAATGGGCTACTGAGTTTCGGCGGTCGATCCCTCGC
CTCTCACAATCGGCATCACCATCAGCAGCAGCAGCAGCAGCAGCAGCAGC
AGCAGCAGCAGTCCTCCTTCTTCTCCTCTTCTTCATCGTCCTTGTATATG
CCCTCGTTGTTGGAGTCCTCCAGGTCGTTTGGGGGGGGCGGGGGAGGGAT
GGGGGAGGGGAGGGGTATGAGGCCTGCTATGCCTATCACCGTGTCAAGGT
GGAGTTGCCTCCTCAGTAGCGTGAGGAGGGCGGCACGGAGTCAGGGAAAG
GAGCACATATTTTGTGATAATGATGACATTTGA
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protein sequence of NO05G00250.1

>NO05G00250.1-protein ID=NO05G00250.1-protein|Name=NO05G00250.1|organism=Nannochloropsis oceanica|type=polypeptide|length=811bp
MPLLIAVPPSPTDPMSAGGTPEVDSHASASVADAPRHAHFSSGSGPSSSF
ISSLHEAGANYHPPRESRSSLLGKRRHYYFESDSDSDDDSEEEEGEEEGE
EEEEEDADDAGLEGEAREEEEGVKEDSGLLHSQSSGLARSKKRKNESEGG
KEEEEEEGHSPAVGSRKQPRTYKEYIRSRTVSTSTTTTTASSSSSSSSSS
SSSSSSSSSSSSPPAYASPSSASATRVFRRGGGPGALPPPLSPPHRLVLP
PPQHATLTGPVTSAAAAAAAAAAAAAAAAAAAAATTGGGRGGGRSRGSMP
SSLSASSLTPGDEMTTTSNNLSSGAAAAVTGTAGTASTKTRRLRVFEPPS
SSASLRLRQLREQRGSTTTTTTTTAAATAAASTAGAASLAEMSTRTDPTI
AAAAAAAGASFRAAGGTRESLSSFSRIGPAAAAASADRRLVRSTVVGVSS
GSSTPSEEEEEEDDSDGDEDEDEDDWRQGPARSLHDPALFLSLGRGGRRL
PPPSQSRLLLQQQQQQQLQQLRRARRHRYWPNDDDDEGDDLEGMRREVDE
EEEEEDLWAMAVGRSRHNNSNNSNNNNNNNNNNNNNNHNNNNNNNNNNNN
NTNSSRTSRRGSSSSSSSSNSSFLLRQPARRIPAPAPSAAPPSLPPSRPS
SYRPPSSPPTASSLLGIDMRLPPPTRRREEEREGGEEGEESMVMDDVVSR
LLGYGNGLLSFGGRSLASHNRHHHQQQQQQQQQQQQQSSFFSSSSSSLYM
PSLLESSRSFGGGGGGMGEGRGMRPAMPITVSRWSCLLSSVRRAARSQGK
EHIFCDNDDI*
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Synonyms
Publications