NO05G00180, NO05G00180 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO05G00180 vs. NCBI_GenBank
Match: EWM30607.1 (Barwin-related endoglucanase [Nannochloropsis gaditana]) HSP 1 Score: 116.7 bits (291), Expect = 1.800e-22 Identity = 61/212 (28.77%), Postives = 108/212 (50.94%), Query Frame = 0 Query: 18 AMSMNQGLGFDIRELYGKPVQGSLVYNDLQHAPAQGHCALGPPTPAGVPSEISNIKATVGVSSQLYAFAPCGTCLRV--------FLPGDETMDVIVNDECKECEWGTLNVGQNGEGRVPVSWMAIPCATGGTPISYLMVDSNEWFLKIQARLTKCPVGQMRVQGANGAWMEGVATPDDHWQFRPTAPIKTPLQVKLTSIFGEEITDSLPAI 222 ++++ +G G D E + KP++G Y + G C L P + +P+EI I TV + + CG C+ + P + VN+ C ECE+G L+ G+G + W AIPC I ++ + SN+++LK+ + ++ P +R++ G W EG +++FR AP P++V++TS+FGE +TD + ++ Sbjct: 21 SIALAEGAGSD--EWFIKPIRGRSTY--YGNYGGGGACGLDQPDGSAIPAEIQGIDFTVALDQPQFDVGGCGMCILLNGTGVGAGGNPVNGIYTAFVNNLCPECEYGHLDFALPGDGSWEIEWKAIPCDVRDHKIRFVFMGSNDFYLKVSTQASRFPTKALRLK-MGGEWREGWPVHGSYFEFRDGAPFTFPMEVEITSVFGEVLTDWIESL 227
BLAST of NO05G00180 vs. NCBI_GenBank
Match: PRP81266.1 (endochitinase-like [Planoprotostelium fungivorum]) HSP 1 Score: 106.7 bits (265), Expect = 1.800e-19 Identity = 61/198 (30.81%), Postives = 98/198 (49.49%), Query Frame = 0 Query: 53 GHCALGPPTPAGVPSEI-SNIKATVG-VSSQLYAFAPCGTCLRV--------FLPGDETMDVIVNDECKECEWGTLNVGQNGEGRVPVSWMAIPCATGGTPISYLMVDSNEWFLKIQARLTKCPVGQMRVQGANGAWMEGVATPDDHWQFRP---TAPIKTPLQVKLTSIFGEEITDSLPAITNNIQSGTMNFRDCGP 238 G+C + P VP I SNI +V VS+ + A CG+C+++ P VND+C C G L+ +NG+G +SW + C G + I Y SNEW++K+QAR + P+ + +Q N + D++ P P+K P ++LTS GE + D++ ++ N +Q +NFR+ P Sbjct: 351 GNCQIYP-----VPQNIKSNIDVSVAMVSAYWFGSAACGSCIQITGSGKGAGSNPVKGNFTAFVNDQCPTCVPGGLDFAKNGDGLWDISWKVVDCPVGNSGIYYAFQGSNEWYMKVQARNHRTPLNFISIQDPNTKQYRKMKRTGDNFFELPDGFPVPVKYPAPIQLTSFSGEVLNDAISSLGNIVQGTGVNFREFRP 543
BLAST of NO05G00180 vs. NCBI_GenBank
Match: XP_009048811.1 (hypothetical protein LOTGIDRAFT_157982 [Lottia gigantea] >ESP00692.1 hypothetical protein LOTGIDRAFT_157982 [Lottia gigantea]) HSP 1 Score: 105.1 bits (261), Expect = 5.400e-19 Identity = 65/226 (28.76%), Postives = 108/226 (47.79%), Query Frame = 0 Query: 11 FAVALAVAMSMNQGLGFDIRELYGKPVQGSLVYNDLQHAPAQGHCALGPPTPAGVPSEIS-NIKATVGVSS-QLYAFAPCGTCLRVFLPG--------DETMDVIVNDECKECEWGTLNVGQNGEGRVPVSWMAIPCATGGTPISYLMVDSNEWFLKIQARLTKCPVGQMR-VQGANGAWMEGVATPDDHWQFRPTAPIKTPLQVKLTSIFGEEITDSLPAITNNI 226 F+++++ + + L ++ LY G Y G C+ PP+ P+ +S +IK V ++ Q + CG C RV G + +V V D C EC G L++ + G+GR + A+ C G + I YL+ SN W++K+Q R + P ++R +QG W++ T D W+F I TP+ + L S G +I D +P I N++ Sbjct: 10 FSLSVSCCFAADLSLEKELAALYKNTYLGDGTY---YKKTPNGTCSYTPPSLP--PTALSPHIKYLVALNKPQFHDAMTCGMCFRVHAEGKGAGLDPIEGDFNVFVKDMCPECLQGDLDLAEKGDGRWKILMQAVQCPVGNSYIEYLLQGSNVWYIKLQVRNARVPATEVRALQGEK--WVKLKHTSDGFWEFSTGEKITTPISIHLRSFRGHDIYDIIPEIVNDV 228
BLAST of NO05G00180 vs. NCBI_GenBank
Match: PRP81275.1 (MAP/microtubule affinity-regulating kinase 3-like [Planoprotostelium fungivorum]) HSP 1 Score: 105.1 bits (261), Expect = 5.400e-19 Identity = 61/198 (30.81%), Postives = 97/198 (48.99%), Query Frame = 0 Query: 53 GHCALGPPTPAGVPSEI-SNIKATVG-VSSQLYAFAPCGTCLRV--------FLPGDETMDVIVNDECKECEWGTLNVGQNGEGRVPVSWMAIPCATGGTPISYLMVDSNEWFLKIQARLTKCPVGQMRVQGANGAWMEGVATPDDHWQFRP---TAPIKTPLQVKLTSIFGEEITDSLPAITNNIQSGTMNFRDCGP 238 G+C + P VP I SNI +V VS+ + A CG+C+++ P VND+C C G L+ +NG+G +SW + C G + I Y SNEW++K+QAR + P+ + +Q N + D++ P P+K P ++LTS GE + D++ ++ N Q +NFR+ P Sbjct: 744 GNCQIYP-----VPQNIKSNIDVSVAMVSAYWFGSAACGSCIQITGSGKGAGSNPVKGNFTAFVNDQCPTCVPGGLDFAKNGDGLWDISWKVVDCPVGNSGIYYAFQGSNEWYMKVQARNHRTPLNFISIQDPNTKQYRKMKRTGDNFFELPDGFPVPVKYPAPIQLTSFSGEVLNDAISSLGNIAQGTGVNFREFRP 936
BLAST of NO05G00180 vs. NCBI_GenBank
Match: XP_022329079.1 (uncharacterized protein LOC111128005 isoform X1 [Crassostrea virginica] >XP_022333973.1 expansin-B1-like [Crassostrea virginica]) HSP 1 Score: 99.8 bits (247), Expect = 2.300e-17 Identity = 60/211 (28.44%), Postives = 96/211 (45.50%), Query Frame = 0 Query: 28 DIRELYGKPVQGSLVYNDLQHAPAQGHCALGPPTPAGVPSEISNIKATVGVS-SQLYAFAPCGTCLRVFLPG--------DETMDVIVNDECKECEWGTLNVGQNGEGRVPVSWMAIPCATGGTPISYLMVDSNEWFLKIQARLTKCPVGQMRV-QGANGAWMEGVATPDDHWQFRPT---APIKTPLQVKLTSIFGEEITDSLPAITNNI 226 DI +LY G+ ++ + H G C+ PP+ +P I T+ ++ Q Y CG C RV + G DET V V D C C G + + +GR+ + AI C G T + Y S+ +++K+Q R ++ P ++ + Q W T D W F P+K P +++LT GE I D++P + N + Sbjct: 24 DILDLYKYKFHGNGIFFEATHG---GTCSYDPPS---MPPVAQYIDRTIAINPRQFYRGHACGVCFRVKIDGKSNGGAQVDETFIVFVKDFCPNCMPGVPLLTDDVDGRMGMEMQAIQCPVGNTTLEYKFQGSSPYYIKLQVRNSRIPATKVEIYQPKWRQWTALAHTTDGFWTFGSAPVERPVKPPFRIRLTGANGERIVDTVPDLVNGV 228
BLAST of NO05G00180 vs. NCBI_GenBank
Match: XP_011442024.1 (PREDICTED: uncharacterized protein LOC105338541 [Crassostrea gigas]) HSP 1 Score: 98.2 bits (243), Expect = 6.600e-17 Identity = 66/231 (28.57%), Postives = 105/231 (45.45%), Query Frame = 0 Query: 10 IFAVALAVA-MSMNQGLGF-DIRELYGKPVQGSLVYNDLQHAPAQGHCALGPPTPAGVPSEISNIKATVGVS-SQLYAFAPCGTCLRVFLPG--------DETMDVIVNDECKECEWGTLNVGQNGEGRVPVSWMAIPCATGGTPISYLMVDSNEWFLKIQARLTKCPVGQMRV-QGANGAWMEGVATPDDHWQFRP---TAPIKTPLQVKLTSIFGEEITDSLPAITNNI 226 ++AV +A + QG+ DI +LY G+ ++ + H G C+ PP+ +P I T+ ++ Q Y CG C RV + G DET V V D C C G + + +GR+ + AI C G T + Y S +++K+Q R + P ++ + Q W T D W F P+K P +++LT+ GE I DS+P + N + Sbjct: 1 MYAVVFCLAFFGLVQGIQHRDILDLYKYRYHGNGIFFEATHG---GTCSYDPPS---MPPVARYIDRTIAINPRQFYRGYACGVCFRVNIAGKSNGGAQVDETFTVFVKDYCPNCMPGIPLLTDDVDGRMWMEMQAIQCPVGNTTLEYKFQGSGPYYIKLQVRNARIPPTKVEIYQPKWRQWTPLAHTTDGFWTFGTEPVERPVKPPFRIRLTAANGERIVDSVPDLVNGV 225
BLAST of NO05G00180 vs. NCBI_GenBank
Match: XP_022329080.1 (uncharacterized protein LOC111128005 isoform X2 [Crassostrea virginica]) HSP 1 Score: 97.8 bits (242), Expect = 8.600e-17 Identity = 56/185 (30.27%), Postives = 83/185 (44.86%), Query Frame = 0 Query: 53 GHCALGPPTPAGVPSEISNIKATVGVSSQLYAFAPCGTCLRVFLPGD--------ETMDVIVNDECKECEWGTLNVGQNGEGRVPVSWMAIPCATGGTPISYLMVDSNEWFLKIQARLTKCPVGQMRV-QGANGAWMEGVATPDDHWQFRP---TAPIKTPLQVKLTSIFGEEITDSLPAITNNI 226 G C+ PP+ V I+ + A + Q + CG C RV G T V D C EC G L++ +NG+GR + AI C G I Y SN W+LK+Q R + P + + Q + W T D W F P+ TP V+LT+ G+ + D +P++ N++ Sbjct: 42 GTCSYSPPSMPPVSQHINKLVAL--NAPQFFGSLSCGMCFRVHGTGQGAGNDPITGTFTAFVKDLCPECHAGALDLAENGDGRWRIEIQAIQCPVGNGKIEYKFQGSNPWYLKLQIRNARIPATTVEMYQPKSRRWSALHHTTDGFWVFGSDPVDKPVVTPFHVRLTAANGDVVEDHIPSLANDV 224
BLAST of NO05G00180 vs. NCBI_GenBank
Match: XP_022333975.1 (uncharacterized protein LOC111130960 [Crassostrea virginica]) HSP 1 Score: 97.8 bits (242), Expect = 8.600e-17 Identity = 56/185 (30.27%), Postives = 83/185 (44.86%), Query Frame = 0 Query: 53 GHCALGPPTPAGVPSEISNIKATVGVSSQLYAFAPCGTCLRVFLPGD--------ETMDVIVNDECKECEWGTLNVGQNGEGRVPVSWMAIPCATGGTPISYLMVDSNEWFLKIQARLTKCPVGQMRV-QGANGAWMEGVATPDDHWQFRP---TAPIKTPLQVKLTSIFGEEITDSLPAITNNI 226 G C+ PP+ V I+ + A + Q + CG C RV G T V D C EC G L++ +NG+GR + AI C G I Y SN W+LK+Q R + P + + Q + W T D W F P+ TP V+LT+ G+ + D +P++ N++ Sbjct: 42 GTCSYSPPSMPPVSQHINKLVAL--NAPQFFGSLSCGICFRVHGTGQGAGNDPITGTFTAFVKDLCPECHAGALDLAENGDGRWRIEIQAIQCPVGNGKIEYKFQGSNPWYLKLQIRNARIPATTVEMYQPKSRRWSALHHTTDGFWVFGSDPVDKPVVTPFHVRLTAANGDVVEDHIPSLANDV 224
BLAST of NO05G00180 vs. NCBI_GenBank
Match: XP_022329081.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111128007 [Crassostrea virginica] >XP_022335209.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111131794 [Crassostrea virginica]) HSP 1 Score: 97.1 bits (240), Expect = 1.500e-16 Identity = 57/187 (30.48%), Postives = 86/187 (45.99%), Query Frame = 0 Query: 52 QGHCALGPPTPAGVPSEISNIKATVGVSS-QLYAFAPCGTCLRVFLPGD--------ETMDVIVNDECKECEWGTLNVGQNGEGRVPVSWMAIPCATGGTPISYLMVDSNEWFLKIQARLTKCPVGQMRV-QGANGAWMEGVATPDDHWQFRP---TAPIKTPLQVKLTSIFGEEITDSLPAITNNI 226 +G C+ PP+ +P NI V +++ Q + CG C RV G T V D C C G L++ +NG+GR + AI C G I Y SN W+LK+Q R + P + + Q + W + D W F P+ TP +V+LT+ G+ +TD +P I N++ Sbjct: 41 EGTCSYSPPS---MPPVSRNINKLVALNAPQFFGSLSCGXCFRVRGTGQGSGNDPITGTFTAFVKDLCPGCRAGDLDLAENGDGRWRIEIQAIQCPVGNGKIEYKFQGSNPWYLKLQIRNARIPATTVEMYQPKSRRWAAMRPSTDGFWVFGSDPVDKPVVTPFRVRLTAANGKVVTDRIPRIANDV 224
BLAST of NO05G00180 vs. NCBI_GenBank
Match: XP_011442014.1 (PREDICTED: uncharacterized protein LOC105338530 [Crassostrea gigas] >EKC31365.1 Expansin-yoaJ [Crassostrea gigas]) HSP 1 Score: 96.7 bits (239), Expect = 1.900e-16 Identity = 57/185 (30.81%), Postives = 82/185 (44.32%), Query Frame = 0 Query: 53 GHCALGPPTPAGVPSEISNIKATVGVSSQLYAFAPCGTCLRVFLPGD--------ETMDVIVNDECKECEWGTLNVGQNGEGRVPVSWMAIPCATGGTPISYLMVDSNEWFLKIQARLTKCP-VGQMRVQGANGAWMEGVATPDDHWQFRP---TAPIKTPLQVKLTSIFGEEITDSLPAITNNI 226 G C+ PP+ V I+ + A + Q + CG C RV G T V D C EC G L++ +NG+GR + AI C G I Y SN W+LK+Q R + P G Q + W T D W F P+ P++V+LT+ G+ I D +P + N++ Sbjct: 42 GTCSYSPPSMPPVARHINKLVAL--NAPQFFGSLSCGMCFRVHGTGQGAGNDPITGTFTAFVKDLCPECHAGALDLAENGDGRWKIEIQAIQCPVGNGKIEYKFQGSNNWYLKLQIRNARIPATGVEMYQPKSNRWSALHHTTDGFWVFGSDPVDKPVVFPIRVRLTAANGQAIQDHVPRLGNDV 224 The following BLAST results are available for this feature:
BLAST of NO05G00180 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO05G00180 ID=NO05G00180|Name=NO05G00180|organism=Nannochloropsis oceanica|type=gene|length=2948bpback to top protein sequence of NO05G00180.1 >NO05G00180.1-protein ID=NO05G00180.1-protein|Name=NO05G00180.1|organism=Nannochloropsis oceanica|type=polypeptide|length=431bpback to top Synonyms
Publications
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