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Properties
| Property Name | Value |
|---|
| Description | Mucin-2 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| chr5 | genome | chr5:10484..13915 - |
Analyses
This gene is derived from or has results from the following analyses
Homology
BLAST of NO05G00040 vs. NCBI_GenBank
Match: EWM28401.1 (hypothetical protein Naga_100206g4 [Nannochloropsis gaditana]) HSP 1 Score: 193.0 bits (489), Expect = 3.600e-45 Identity = 122/306 (39.87%), Postives = 162/306 (52.94%), Query Frame = 0
Query: 1 MPALRWLTTATVTALMAAIAHTAPISSDLATTEAQD--TPTWSVQQDCTRSPLGNGVLDCSYQGQLVRVQNAETRTHVQAPGSVIWSDASTGDIDVRTSGFGLTCVTIKEGEK-AGEQRCHVKTDLW----DTNSGVAPTVDTAATAKPS----PTLAFSSLRGNDRAREVVSGDIQKQTRMVDPYPDLAADDCQATETGRNCTYVDGQWAHVATTEEGAMHVTAPGVEVRAAPKEGGDVSVDAWGFHIDCRKDPTTNKTKCHTTNDWLGSGVGASADGGEPTPLPAVNAASSSPKRGWDTAPDPV 296
MP L + A V + A ++ SS T+ QD P+ Q C+RS ++DC+Y+G L+ V + T+V+A GS IWSD STG+++V GF L C+ I GEK +Q C V T W D + V + A+ A PS P+ A S LRG + ++ T + P P DC+ T GRNCT GQWAHV E+G HVTAPGV++R + GGDV VDAWGFH+ CRK+ TNKT C +NDW G G GA G P P+ A + P+ + PDPV
Sbjct: 1 MPPLHRINAACVAVMAAMVSRIT--SSYALATDIQDPLLPSNFTQTSCSRSSKAANIMDCTYEGHLIHVTTVDAHTNVEALGSKIWSDLSTGEMEVEAPGFKLRCL-ISRGEKDFDDQPCEVDTS-WRRKPDADYSVEASEVPASMASPSSPEHPSFAVSLLRG--------ARTLEASTDLAGPQPATQPFDCRRTAAGRNCTDAGGQWAHVERNEDGGTHVTAPGVDIRTGGEGGGDVRVDAWGFHLVCRKESATNKTTCGASNDWFGKG-GAGRTGDGPAPVSA-----ARPRGPEEDVPDPV 288 HSP 2 Score: 71.6 bits (174), Expect = 1.200e-8 Identity = 29/46 (63.04%), Postives = 34/46 (73.91%), Query Frame = 0
Query: 701 PSVPDPRDPAWLSNQKDCTRAIKGEGKDCWVDGRWVHVQTGEVSER 747
PS PDPRDP W+SN K+CTRA KGEG+DCW D WV+ +TG R
Sbjct: 406 PSTPDPRDPLWVSNPKNCTRAFKGEGEDCWDDEHWVNGRTGTSGRR 451
The following BLAST results are available for this feature:
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO05G00040 ID=NO05G00040|Name=NO05G00040|organism=Nannochloropsis oceanica|type=gene|length=3432bp
CGATCGTGGAAGCATTGTTTTTCGTTCTTTAAAATTATTTTGTGGACGGC
CTGTTTTGGAGCTCTCTGTAATGTCTTTTTCCTCCTTGCCCAATTACCAT
GCATTACCAACTGGAGGGGGGGGTGAGTTCGACATGCCAATTTAGTCCGG
CAGCGAAGTGGGATCATGCAATAGTGAAGGATGACTGCTCGTCCGACTGA
TCGTCAGCTTTTAAAGAAAGGAAATTTTACAATCGTGAGCGTGAAATACT
CGAGGCTGACCGCTGAGATAAGTAGAAGCACGCCGGGTCCCTGATCGGCG
AAGGTTGCCAGCCCAGAAGAGGGGAATCGCCTTCTGCTGTTCTTTTCTCG
TTGTCAAAAGCCCTGCTATGCTCAAATTTCATGTCCCAAATATTTAAAGT
GGAAAGGCGTGTATGAAAGGCTGTCCTTTGGTATACTAGACGCAGTACTC
TTCGCAAAATCAACATAGTTTGCAGGCAGGGGGCACTATGACACAAGCCA
GAAGCAAGGCACATATGGGCAATGACCTAGCATCGATGCTGCTGTGCCTT
GCCATCTCGAGCTTGCAGCGACGTCCACTGCATGCACATCAACTCTCTTT
CAATTTTTGCGTTGCCTTGGCATGTCTCAAAGCTTTTAATCGTTCGCGTT
TATTACGCTCGTCAACCCGCCACAATTATCTTTCCCCGCTACGGGCTTGA
ACAGCTTCGAAATTCCTATTACCTACTCTCTCTTTTTTCCAAACACAGCC
AAAAACTTAAGCAAGGACCGAAACATGCCGGCATTGCGGTGGCTCACAAC
AGCCACGGTGACCGCATTGATGGCAGCCATAGCTCATACAGCGCCCATTT
CCAGCGACTTAGCTACCACCGAGGCTCAGGACACGCCTACTTGGAGCGTG
CAGCAAGgtaagtgcaaatccgcctggaacagtgcggacaagaacgatgg
agacaatattttcttctggaaacaattgttggacgagctgattgagctgt
cctttattgaaatttgatcgcatgccggcattttccccgattgctgagat
cagccctgtgtcgtgcctgccttgataccacactctcctttatccctttt
ctgtcgaagacattgccaaaatacgcatcacccttctttaattttaatct
ctatgagtacttactctcgcttttcctgccactaaccagATTGCACCCGC
TCTCCCCTCGGGAACGGCGTCCTGGACTGTTCCTACCAAGGTCAGCTCGT
GCGTGTCCAAAACGCCGAAACTCGTACCCACGTGCAAGCACCGGGCTCGG
TGATCTGGAGCGATGCCTCCACAGGTGATATAGATGTACGTACGTCCGGA
TTTGGGTTGACTTGTGTGACGATCAAGGAGGGGGAGAAGGCGGGGGAGCA
ACGTTGCCACGTCAAGACGGACTTGTGGGACACGAATTCTGGTGTTGCCC
CTACAGTAGACACTGCCGCCACCGCCAAGCCTTCCCCTACCCTCGCCTTC
TCGTCTCTTCGGGGCAATGATCGAGCCCGGGAGGTCGTGAGCGGCGACAT
TCAGAAGCAGACACGCATGGTAGATCCCTATCCTGACCTGGCGGCAGATG
ACTGTCAAGCAACAGAGACGGGTCGTAATTGTACCTATGTGGATGGTCAA
TGGGCACATGTCGCGACGACAGAGGAGGGCGCCATGCACGTTACGGCCCC
AGGGGTGGAGGTCCGAGCGGCGCCCAAGGAGGGAGGAGACGTGAGTGTGG
ACGCGTGGGGTTTCCATATCGATTGCCGTAAAGACCCGACCACGAATAAG
ACCAAGTGCCACACAACGAATGATTGGTTAGGGAGTGGGGTGGGGGCAAG
TGCGGACGGAGGAGAGCCGACGCCTCTACCCGCGGTAAATGCGGCATCGT
CCTCTCCTAAAAGAGGATGGGATACCGCGCCCGACCCTGTCATGCACTTG
CACCCTCATCCTCCTCATGCCGAGGTGGCGACAGATAATACGGCAACAAG
CACCTCGAGCAGCACCAGCACCAGCATCAGCACCATTACGAGTAGCAGTA
GCACTTACAGAGACTACAACCGTGGGCCTTCTCCGGCTACTCGCCCTGCC
GTCGACCCTCGCCCCCCCAAAACGACGGCATCTACTCCGCCGGCTGACTT
GGTAGATCCCATATTCTCTGTTCCTACCACCACCACCACCACATCATCTA
CTCCGCCGGCTGACTTGGTAGATCCCATATTCTCTGTTCCTACCACCACC
ACCACCACCACATCATCTACTCCGCCGGCTGACTTGGTAGATCCCATATT
CTCTGTTCCTACCACCACCACCACATCATCTACTCCGCCGGCTGACTTGG
TAGAGCCCATATTCTCTGTTCCTACCACCACCACCACATCATCTACTCCG
CCGGCTGACTTGGTAGATCCCATATTCTCTGTTCCTACCACCACCACCAC
ATCATCTACTCCGCCGGCTGACTTGGTAGATCCCATATTCTCTGTTCCTA
CCACCACCACCACATCATCTACTCCGCCGGCTGACTTGGTAGATCCCATA
TTCTCTGTTCCTACCACCACCACCACCACATCATCTACTCCGCCGGCTGA
CTTGGTAGATCCCATATTCTCTGTTCCTACCACCACCACCACCACCACAT
CATCTACTCCGCCGGCTGACTTGGTAGATCCCATATTCTCTGTTCCTACC
ACCACCACCACATCATCTACTCCGCCGGCTGACTTGGTAGATCCCATATT
CTCTGTTCCTACCACCACCACCACATCATCTACTCCGCCGGCTGACTTGG
TAGATCCCATATTCTCTGTTCCTACCACCACCACCACATCATCTACTCCG
CCGGCTGACTTGGTAGATCCCATATTCTCTGTTCCTACCACCACCACCAC
ATCATCTACTCCGCCGGCTGACTTGGTAGATCCCATATTCTCTGCTCCTA
CCACCACCACCACCACATCATCTACTCCGCCGGCTGACTTGGTAGATCCC
ATATTCTCTTACCCTGTTCCTGCCGCTAGCATGACGGAGGATGGGGAAGC
CATCACCGTCATTCCCGATGTTGTTACACCCATTGCTGCTGTCGGTGTCT
CCGATCCCTTTGAAGGCATCGGCTCTTCCGCTTCCTCCTCCTCTATTGGC
GCCACGCCTTCCGTCCCCGATCCCCGGGATCCAGCCTGGCTGTCCAACCA
GAAGGACTGCACACGGGCCATCAAAGGCGAAGGCAAAGACTGTTGGGTCG
ACGGCCGGTGGGTTCACGTGCAGACAGGAGAAGTCAGCGAGAGGATGACT
TCTGCTGTTGCTGCCACCGCTACTGCTGCTTTTTCCGCCAGCGTCTCTGA
GGTTGATGAGTCTGGTGTGGTGATGCTGGCGGATGACGCTGCAGGTCTCG
GAGATGTGCATGCGCCGAACATGTGGGTCTAA back to topprotein sequence of NO05G00040.1 >NO05G00040.1-protein ID=NO05G00040.1-protein|Name=NO05G00040.1|organism=Nannochloropsis oceanica|type=polypeptide|length=792bp
MPALRWLTTATVTALMAAIAHTAPISSDLATTEAQDTPTWSVQQDCTRSP
LGNGVLDCSYQGQLVRVQNAETRTHVQAPGSVIWSDASTGDIDVRTSGFG
LTCVTIKEGEKAGEQRCHVKTDLWDTNSGVAPTVDTAATAKPSPTLAFSS
LRGNDRAREVVSGDIQKQTRMVDPYPDLAADDCQATETGRNCTYVDGQWA
HVATTEEGAMHVTAPGVEVRAAPKEGGDVSVDAWGFHIDCRKDPTTNKTK
CHTTNDWLGSGVGASADGGEPTPLPAVNAASSSPKRGWDTAPDPVMHLHP
HPPHAEVATDNTATSTSSSTSTSISTITSSSSTYRDYNRGPSPATRPAVD
PRPPKTTASTPPADLVDPIFSVPTTTTTTSSTPPADLVDPIFSVPTTTTT
TTSSTPPADLVDPIFSVPTTTTTSSTPPADLVEPIFSVPTTTTTSSTPPA
DLVDPIFSVPTTTTTSSTPPADLVDPIFSVPTTTTTSSTPPADLVDPIFS
VPTTTTTTSSTPPADLVDPIFSVPTTTTTTTSSTPPADLVDPIFSVPTTT
TTSSTPPADLVDPIFSVPTTTTTSSTPPADLVDPIFSVPTTTTTSSTPPA
DLVDPIFSVPTTTTTSSTPPADLVDPIFSAPTTTTTTSSTPPADLVDPIF
SYPVPAASMTEDGEAITVIPDVVTPIAAVGVSDPFEGIGSSASSSSIGAT
PSVPDPRDPAWLSNQKDCTRAIKGEGKDCWVDGRWVHVQTGEVSERMTSA
VAATATAAFSASVSEVDESGVVMLADDAAGLGDVHAPNMWV* back to top
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