NO05G00020, NO05G00020 (gene) Nannochloropsis oceanica

Overview
NameNO05G00020
Unique NameNO05G00020
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3083
Alignment locationchr5:4977..8059 -

Link to JBrowse

Properties
Property NameValue
DescriptionProtein casp
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:4977..8059 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0030173integral component of Golgi membrane
GO:0030173integral component of Golgi membrane
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0006891intra-Golgi vesicle-mediated transport
GO:0006891intra-Golgi vesicle-mediated transport
Vocabulary: INTERPRO
TermDefinition
IPR012955CASP_C
Homology
BLAST of NO05G00020 vs. NCBI_GenBank
Match: EWM28396.1 (protein casp [Nannochloropsis gaditana])

HSP 1 Score: 267.3 bits (682), Expect = 1.700e-67
Identity = 174/361 (48.20%), Postives = 208/361 (57.62%), Query Frame = 0
Query:  550 MASRRKVADMEGERKRLEEMKCVAEAKAQAQSVLVARLENDLARVVAKGRMGXXXXXXXXXXXXXEAICPAANLVGALSPFSHLLQTXXXXXXXXXXXQERGEALTVDMHELLTTAAKVAPSXXXXXXXXXXXXXXXXDLVQILQDQRDRYKCRVRTLEGELAAAGHEIGRFKVQAETMLRDNLTLYEKMRFLQCYGRGR-SSGGRRGKQVLATASTGPTPLHQR----QQGSGSPEGMMEAGDVLT--IAAATEVRYRRMYEEQLNPFAAFSAAERFRNYQDMNVVDKITLQGARAFLANKTARMMVFMYFISLHVLVFLTLYMWGHHHCADLYYPKDSPMSIPSDAQSFQ----GNHGV 900
            M+ RR++A++EGER RLE  K  AEA+    S L++RLE+DLARV +KG +G                  A   VG+ S    +               E  E L VDMHELL +  + AP+                DLV+ILQ QRDRYK R R LEG LAA   E GR K QAE+MLRDNL LYEK+RFLQ Y +GR         Q    +    + LHQR     +G G+ E  +EAG V T   AAATE RYR MYEEQ+NPF AFS AER R YQD++V+DKITLQ  RAFLA+K ARM VF Y +SLH+LVFLTLYMWGHHHC DL+Y  D  M  P +    Q    GNH V
Sbjct:    1 MSGRRRIAELEGERARLENEKGSAEARVVELSALISRLEDDLARVASKG-VGDVM---------------AEGTVGSQSRTPSVPPGRGPSWKVASSRDE--EDLDVDMHELLASTTQPAPA-------LGASPSASLDLVRILQAQRDRYKARTRELEGRLAAVEQESGRHKAQAESMLRDNLKLYEKVRFLQSYKKGRVGPDALDSTQDKRMSGLEHSTLHQRNVVNDEGKGAQEYALEAGRVPTGAGAAATEARYRAMYEEQMNPFTAFSVAERVRKYQDLSVIDKITLQTTRAFLAHKKARMAVFFYAVSLHLLVFLTLYMWGHHHCTDLHYQADVLMGHPPEPLGMQSLSMGNHAV 336          
BLAST of NO05G00020 vs. NCBI_GenBank
Match: XP_008891689.1 (hypothetical protein PPTG_02376 [Phytophthora parasitica INRA-310] >ETK90006.1 hypothetical protein L915_06130 [Phytophthora parasitica] >ETM49746.1 hypothetical protein L914_06066 [Phytophthora parasitica] >ETN22436.1 hypothetical protein PPTG_02376 [Phytophthora parasitica INRA-310] >ETP19905.1 hypothetical protein F441_06257 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 193.4 bits (490), Expect = 3.200e-45
Identity = 221/795 (27.80%), Postives = 350/795 (44.03%), Query Frame = 0
Query:   88 LAFWTHLDLRGTCRSELERQGRELKEAKESTIKNRKRLAEATKEWRK---SSSSGKGAEDLLKAYQEEIDNLTRRARGADAAFANVYQALYDAPDPTPYLSTALSDRRVTASLEVELGRLQREIQEYEIEFRKLKNQDVTIRRLQEKLMAYEKEAAGDMAASVEEARAEIE-ALADARVREAVER---EQRLEARLVVAQEAXXXXXXXXXXXXXXXXXXXXXXXXXXXAMGSEGELLAQE---RERHKAEADALRKELEAAVAAVSAAKRGDALLSMDGHISPASVSFSLSAPVEGSSSSSSSKILALQNELDEMGASLALVRHRFFTKEEEWTQAQARMQETAEGLERELDKERKARAEVEEGMCRRPAMEEVVRLRRQIRMLQQLEFNGAXXXXXXXXXXXXXXXRARMNERQHPLPLKRVDKCGQNCELVEEXXXXXXXXXXGVGEASVRRSVGHLLMSRLRRMETEVMASRRKVADMEGERKRLEEMKCVAEAKAQAQSVLVARLENDLARVVAKGRMGXXXXXXXXXXXXXEAICPAANLVGALSPFSHLLQTXXXXXXXXXXXQERGE--ALTVDMHELLTTAAKVAPSXXXXXXXXXXXXXXXXDLVQILQDQRDRYKCRVRTLEGELAAAGHEIGRFKVQAETMLRDNLTLYEKMRFLQCYGRGRSSGGRRGKQVLATASTGPTPLHQRQQGSGSPEGMMEAGDVLTIAAATEVRYRRMYEEQLNPFAAFSAAERFRNYQDMNVVDKITLQGARAFLANKTARMMVFMYFISLHVLVFLTLYMWGH 871
            L FW   DL  + R  L+ QG  +K  K++++++RK+LAE TK++R+    +    GA  LLKAYQEEIDNLTRRA+ ++ AF  +Y+ LY APDP P L+   S    T  L  E  +L+RE++EY  EF  LKNQD+TIR L+E++ A ++E    +   VE+   E+E  L +AR+  A +R   E++LEA     +EA                           A+ +E E ++Q+    +  + E   L+K+LE  ++A S ++  +A               S + P + + S S      +Q E D   A +A +R   F  +E    A     E A+ L+  L+  ++ + ++E  +  RP +E+   + R++R+LQQLE+N                                VD+     +              G+  A+V   V  +L+SR+RR+E  +    R +     + + ++        K + Q+ L+  LE ++A  + K R                     + ++G     S +L               RG   A T D     T ++   PS                 +++I++ QRDR++ R++ L+ E          +K     +  DN+ LY K+R+LQ YG G  SGG R K        G                   AG     A   E RYR MYEE++NPF  F+  E  + + ++N VDKI L  A+  L ++  R M F Y + LH LV  TLY + H
Sbjct:   43 LQFWKAFDL-DSKRVLLDSQGSTMKSEKDASVRSRKKLAETTKQFRRLATDADKAAGAGPLLKAYQEEIDNLTRRAKFSENAFFQLYKGLYAAPDPAPALAMVASSSG-TDELAEENKKLKRELKEYAAEFASLKNQDITIRNLEEQVAAAKREREDAVHQQVEKRTRELEDQLENARLEWAQQRRDYERQLEASRAELREA----FAKMDAMQSDLFAHKQRSGLARNALDAEMEAISQDSLLTQTLQLENVQLKKQLEELLSASSPSEIFNAQ--------------SSALPSDDTGSESLQSAREMQAEQD---AVVAALRQEVFRLKEAHATASVAAVEEAKRLKTALENAQQKQKDLEAELAARPTIEKFHEVTRKLRVLQQLEYN-------------------------------IVDEDDDKSKTSSADAAESTGAVDGLEAATV--EVEQILVSRVRRLEHSLQECERTLQTRTTQLQTVQGELHDRNDKIREQATLIRNLEENVA-ALEKARRNR-----------------TSGVIGG-DIGSEILMDAMEDQFTGTSGSSRGNGVATTAD-----TASSSANPS-------------SDSKMLEIVRGQRDRFRERMKELQSEKNRVEELAQSYKSTVARLETDNMQLYHKIRYLQSYG-GDKSGGARIKPNFTALEDG------------------SAG-----AYDVEERYRGMYEEKMNPFVQFNKMENQQRFTNLNPVDKILLTSAKLLLGHRITRNMAFGYILLLHFLVVATLYSFMH 720          
BLAST of NO05G00020 vs. NCBI_GenBank
Match: ETL43410.1 (hypothetical protein L916_06066 [Phytophthora parasitica] >ETO78851.1 hypothetical protein F444_06314 [Phytophthora parasitica P1976])

HSP 1 Score: 193.4 bits (490), Expect = 3.200e-45
Identity = 221/795 (27.80%), Postives = 350/795 (44.03%), Query Frame = 0
Query:   88 LAFWTHLDLRGTCRSELERQGRELKEAKESTIKNRKRLAEATKEWRK---SSSSGKGAEDLLKAYQEEIDNLTRRARGADAAFANVYQALYDAPDPTPYLSTALSDRRVTASLEVELGRLQREIQEYEIEFRKLKNQDVTIRRLQEKLMAYEKEAAGDMAASVEEARAEIE-ALADARVREAVER---EQRLEARLVVAQEAXXXXXXXXXXXXXXXXXXXXXXXXXXXAMGSEGELLAQE---RERHKAEADALRKELEAAVAAVSAAKRGDALLSMDGHISPASVSFSLSAPVEGSSSSSSSKILALQNELDEMGASLALVRHRFFTKEEEWTQAQARMQETAEGLERELDKERKARAEVEEGMCRRPAMEEVVRLRRQIRMLQQLEFNGAXXXXXXXXXXXXXXXRARMNERQHPLPLKRVDKCGQNCELVEEXXXXXXXXXXGVGEASVRRSVGHLLMSRLRRMETEVMASRRKVADMEGERKRLEEMKCVAEAKAQAQSVLVARLENDLARVVAKGRMGXXXXXXXXXXXXXEAICPAANLVGALSPFSHLLQTXXXXXXXXXXXQERGE--ALTVDMHELLTTAAKVAPSXXXXXXXXXXXXXXXXDLVQILQDQRDRYKCRVRTLEGELAAAGHEIGRFKVQAETMLRDNLTLYEKMRFLQCYGRGRSSGGRRGKQVLATASTGPTPLHQRQQGSGSPEGMMEAGDVLTIAAATEVRYRRMYEEQLNPFAAFSAAERFRNYQDMNVVDKITLQGARAFLANKTARMMVFMYFISLHVLVFLTLYMWGH 871
            L FW   DL  + R  L+ QG  +K  K++++++RK+LAE TK++R+    +    GA  LLKAYQEEIDNLTRRA+ ++ AF  +Y+ LY APDP P L+   S    T  L  E  +L+RE++EY  EF  LKNQD+TIR L+E++ A ++E    +   VE+   E+E  L +AR+  A +R   E++LEA     +EA                           A+ +E E ++Q+    +  + E   L+K+LE  ++A S ++  +A               S + P + + S S      +Q E D   A +A +R   F  +E    A     E A+ L+  L+  ++ + ++E  +  RP +E+   + R++R+LQQLE+N                                VD+     +              G+  A+V   V  +L+SR+RR+E  +    R +     + + ++        K + Q+ L+  LE ++A  + K R                     + ++G     S +L               RG   A T D     T ++   PS                 +++I++ QRDR++ R++ L+ E          +K     +  DN+ LY K+R+LQ YG G  SGG R K        G                   AG     A   E RYR MYEE++NPF  F+  E  + + ++N VDKI L  A+  L ++  R M F Y + LH LV  TLY + H
Sbjct:   43 LQFWKAFDL-DSKRVLLDSQGSTMKSEKDASVRSRKKLAETTKQFRRLATDADKAAGAGPLLKAYQEEIDNLTRRAKFSENAFFQLYKGLYAAPDPAPALAMVASSSG-TDGLAEENKKLKRELKEYAAEFASLKNQDITIRNLEEQVAAAKREREDAVHQQVEKRTRELEDQLENARLEWAQQRRDYERQLEASRAELREA----FAKMDAMQSDLFAHKQRSGLARNALDAEMEAISQDSLLTQTLQLENVQLKKQLEELLSASSPSEIFNAQ--------------SSALPSDDTGSESLQSAREMQAEQD---AVVAALRQEVFRLKEAHATASVAAVEEAKRLKTALENAQQKQKDLEAELAARPTIEKFHEVTRKLRVLQQLEYN-------------------------------IVDEDDDKSKTSSADAAESTGAVDGLEAATV--EVEQILVSRVRRLEHSLQECERTLQTRTTQLQTVQGELHDRNDKIREQATLIRNLEENVA-ALEKARRNR-----------------TSGVIGG-DIGSEILMDAMEDQFTGTSGSSRGNGVATTAD-----TASSSANPS-------------SDSKMLEIVRGQRDRFRERMKELQSEKNRVEELAQSYKSTVARLETDNMQLYHKIRYLQSYG-GDKSGGARIKPNFTALEDG------------------SAG-----AYDVEERYRGMYEEKMNPFVQFNKMENQQRFTNLNPVDKILLTSAKLLLGHRITRNMAFGYILLLHFLVVATLYSFMH 720          
BLAST of NO05G00020 vs. NCBI_GenBank
Match: ETL96593.1 (hypothetical protein L917_05945 [Phytophthora parasitica])

HSP 1 Score: 193.4 bits (490), Expect = 3.200e-45
Identity = 221/795 (27.80%), Postives = 350/795 (44.03%), Query Frame = 0
Query:   88 LAFWTHLDLRGTCRSELERQGRELKEAKESTIKNRKRLAEATKEWRK---SSSSGKGAEDLLKAYQEEIDNLTRRARGADAAFANVYQALYDAPDPTPYLSTALSDRRVTASLEVELGRLQREIQEYEIEFRKLKNQDVTIRRLQEKLMAYEKEAAGDMAASVEEARAEIE-ALADARVREAVER---EQRLEARLVVAQEAXXXXXXXXXXXXXXXXXXXXXXXXXXXAMGSEGELLAQE---RERHKAEADALRKELEAAVAAVSAAKRGDALLSMDGHISPASVSFSLSAPVEGSSSSSSSKILALQNELDEMGASLALVRHRFFTKEEEWTQAQARMQETAEGLERELDKERKARAEVEEGMCRRPAMEEVVRLRRQIRMLQQLEFNGAXXXXXXXXXXXXXXXRARMNERQHPLPLKRVDKCGQNCELVEEXXXXXXXXXXGVGEASVRRSVGHLLMSRLRRMETEVMASRRKVADMEGERKRLEEMKCVAEAKAQAQSVLVARLENDLARVVAKGRMGXXXXXXXXXXXXXEAICPAANLVGALSPFSHLLQTXXXXXXXXXXXQERGE--ALTVDMHELLTTAAKVAPSXXXXXXXXXXXXXXXXDLVQILQDQRDRYKCRVRTLEGELAAAGHEIGRFKVQAETMLRDNLTLYEKMRFLQCYGRGRSSGGRRGKQVLATASTGPTPLHQRQQGSGSPEGMMEAGDVLTIAAATEVRYRRMYEEQLNPFAAFSAAERFRNYQDMNVVDKITLQGARAFLANKTARMMVFMYFISLHVLVFLTLYMWGH 871
            L FW   DL  + R  L+ QG  +K  K++++++RK+LAE TK++R+    +    GA  LLKAYQEEIDNLTRRA+ ++ AF  +Y+ LY APDP P L+   S    T  L  E  +L+RE++EY  EF  LKNQD+TIR L+E++ A ++E    +   VE+   E+E  L +AR+  A +R   E++LEA     +EA                           A+ +E E ++Q+    +  + E   L+K+LE  ++A S ++  +A               S + P + + S S      +Q E D   A +A +R   F  +E    A     E A+ L+  L+  ++ + ++E  +  RP +E+   + R++R+LQQLE+N                                VD+     +              G+  A+V   V  +L+SR+RR+E  +    R +     + + ++        K + Q+ L+  LE ++A  + K R                     + ++G     S +L               RG   A T D     T ++   PS                 +++I++ QRDR++ R++ L+ E          +K     +  DN+ LY K+R+LQ YG G  SGG R K        G                   AG     A   E RYR MYEE++NPF  F+  E  + + ++N VDKI L  A+  L ++  R M F Y + LH LV  TLY + H
Sbjct:   43 LQFWKAFDL-DSKRVLLDSQGSTMKSEKDASVRSRKKLAETTKQFRRLATDADKAAGAGPLLKAYQEEIDNLTRRAKFSENAFFQLYKGLYAAPDPAPALAMVASSSG-TDGLAEENKKLKRELKEYAAEFASLKNQDITIRNLEEQVAAAKREREDAVHQQVEKRTRELEDQLENARLEWAQQRRDYERQLEASRAELREA----FAKMDAMQSDLFAHKQRSGLARNALDAEMEAISQDSLLTQTLQLENVQLKKQLEELLSASSPSEIFNAQ--------------SSALPSDDTGSESLQSAREMQAEQD---AVVAALRQEVFRLKEAHATASVAAVEEAKRLKTALENAQQKQKDLEAELAARPTIEKFHEVTRKLRVLQQLEYN-------------------------------IVDEDDNKSKTSSADAAESTGAVDGLEAATV--EVEQILVSRVRRLEHSLQECERTLQTRTTQLQTVQGELHDRNDKIREQATLIRNLEENVA-ALEKARRNR-----------------TSGVIGG-DIGSEILMDAMEDQFTGTSGSSRGNGVATTAD-----TASSSANPS-------------SDSKMLEIVRGQRDRFRERMKELQSEKNRVEELAQSYKSTVARLETDNMQLYHKIRYLQSYG-GDKSGGARIKPNFTALEDG------------------SAG-----AYDVEERYRGMYEEKMNPFVQFNKMENQQRFTNLNPVDKILLTSAKLLLGHRITRNMAFGYILLLHFLVVATLYSFMH 720          
BLAST of NO05G00020 vs. NCBI_GenBank
Match: ETP47824.1 (hypothetical protein F442_06295 [Phytophthora parasitica P10297])

HSP 1 Score: 193.4 bits (490), Expect = 3.200e-45
Identity = 221/795 (27.80%), Postives = 350/795 (44.03%), Query Frame = 0
Query:   88 LAFWTHLDLRGTCRSELERQGRELKEAKESTIKNRKRLAEATKEWRK---SSSSGKGAEDLLKAYQEEIDNLTRRARGADAAFANVYQALYDAPDPTPYLSTALSDRRVTASLEVELGRLQREIQEYEIEFRKLKNQDVTIRRLQEKLMAYEKEAAGDMAASVEEARAEIE-ALADARVREAVER---EQRLEARLVVAQEAXXXXXXXXXXXXXXXXXXXXXXXXXXXAMGSEGELLAQE---RERHKAEADALRKELEAAVAAVSAAKRGDALLSMDGHISPASVSFSLSAPVEGSSSSSSSKILALQNELDEMGASLALVRHRFFTKEEEWTQAQARMQETAEGLERELDKERKARAEVEEGMCRRPAMEEVVRLRRQIRMLQQLEFNGAXXXXXXXXXXXXXXXRARMNERQHPLPLKRVDKCGQNCELVEEXXXXXXXXXXGVGEASVRRSVGHLLMSRLRRMETEVMASRRKVADMEGERKRLEEMKCVAEAKAQAQSVLVARLENDLARVVAKGRMGXXXXXXXXXXXXXEAICPAANLVGALSPFSHLLQTXXXXXXXXXXXQERGE--ALTVDMHELLTTAAKVAPSXXXXXXXXXXXXXXXXDLVQILQDQRDRYKCRVRTLEGELAAAGHEIGRFKVQAETMLRDNLTLYEKMRFLQCYGRGRSSGGRRGKQVLATASTGPTPLHQRQQGSGSPEGMMEAGDVLTIAAATEVRYRRMYEEQLNPFAAFSAAERFRNYQDMNVVDKITLQGARAFLANKTARMMVFMYFISLHVLVFLTLYMWGH 871
            L FW   DL  + R  L+ QG  +K  K++++++RK+LAE TK++R+    +    GA  LLKAYQEEIDNLTRRA+ ++ AF  +Y+ LY APDP P L+   S    T  L  E  +L+RE++EY  EF  LKNQD+TIR L+E++ A ++E    +   VE+   E+E  L +AR+  A +R   E++LEA     +EA                           A+ +E E ++Q+    +  + E   L+K+LE  ++A S ++  +A               S + P + + S S      +Q E D   A +A +R   F  +E    A     E A+ L+  L+  ++ + ++E  +  RP +E+   + R++R+LQQLE+N                                VD+     +              G+  A+V   V  +L+SR+RR+E  +    R +     + + ++        K + Q+ L+  LE ++A  + K R                     + ++G     S +L               RG   A T D     T ++   PS                 +++I++ QRDR++ R++ L+ E          +K     +  DN+ LY K+R+LQ YG G  SGG R K        G                   AG     A   E RYR MYEE++NPF  F+  E  + + ++N VDKI L  A+  L ++  R M F Y + LH LV  TLY + H
Sbjct:   43 LQFWKAFDL-DSKRVLLDSQGSTMKSEKDASVRSRKKLAETTKQFRRLATDADKAAGAGPLLKAYQEEIDNLTRRAKFSENAFFQLYKGLYAAPDPAPALAMVASSSG-TDGLAEENKKLKRELKEYAAEFASLKNQDITIRNLEEQVAAAKREREDAVHQQVEKRTRELEDQLENARLEWAQQRRDYERQLEASRAELREA----FAKMDAMQSDLFAHKQRSGLARNALDAEMEAISQDSLLTQTLQLENVQLKKQLEELLSASSPSEIFNAQ--------------SSALPSDDTGSESLQSAREMQAEQD---AVVAALRQEVFRLKEAHATASVAAVEEAKRLKTALENAQQKQKDLEAELATRPTIEKFHEVTRKLRVLQQLEYN-------------------------------IVDEDDDKSKTSSADAAESTGAVDGLEAATV--EVEQILVSRVRRLEHSLQECERTLQTRTTQLQTVQGELHDRNDKIREQATLIRNLEENVA-ALEKARRNR-----------------TSGVIGG-DIGSEILMDAMEDQFTGTSGSSRGNGVATTAD-----TASSSANPS-------------SDSKMLEIVRGQRDRFRERMKELQSEKNRVEELAQSYKSTVARLETDNMQLYHKIRYLQSYG-GDKSGGARIKPNFTALEDG------------------SAG-----AYDVEERYRGMYEEKMNPFVQFNKMENQQRFTNLNPVDKILLTSAKLLLGHRITRNMAFGYILLLHFLVVATLYSFMH 720          
BLAST of NO05G00020 vs. NCBI_GenBank
Match: ETI50126.1 (hypothetical protein F443_06249 [Phytophthora parasitica P1569])

HSP 1 Score: 191.8 bits (486), Expect = 9.200e-45
Identity = 221/795 (27.80%), Postives = 347/795 (43.65%), Query Frame = 0
Query:   88 LAFWTHLDLRGTCRSELERQGRELKEAKESTIKNRKRLAEATKEWRK---SSSSGKGAEDLLKAYQEEIDNLTRRARGADAAFANVYQALYDAPDPTPYLSTALSDRRVTASLEVELGRLQREIQEYEIEFRKLKNQDVTIRRLQEKLMAYEKEAAGDMAASVEEARAEIE-ALADARVREAVER---EQRLEARLVVAQEAXXXXXXXXXXXXXXXXXXXXXXXXXXXAMGSEGELLAQE---RERHKAEADALRKELEAAVAAVSAAKRGDALLSMDGHISPASVSFSLSAPVEGSSSSSSSKILALQNELDEMGASLALVRHRFFTKEEEWTQAQARMQETAEGLERELDKERKARAEVEEGMCRRPAMEEVVRLRRQIRMLQQLEFNGAXXXXXXXXXXXXXXXRARMNERQHPLPLKRVDKCGQNCELVEEXXXXXXXXXXGVGEASVRRSVGHLLMSRLRRMETEVMASRRKVADMEGERKRLEEMKCVAEAKAQAQSVLVARLENDLARVVAKGRMGXXXXXXXXXXXXXEAICPAANLVGALSPFSHLLQTXXXXXXXXXXXQERGE--ALTVDMHELLTTAAKVAPSXXXXXXXXXXXXXXXXDLVQILQDQRDRYKCRVRTLEGELAAAGHEIGRFKVQAETMLRDNLTLYEKMRFLQCYGRGRSSGGRRGKQVLATASTGPTPLHQRQQGSGSPEGMMEAGDVLTIAAATEVRYRRMYEEQLNPFAAFSAAERFRNYQDMNVVDKITLQGARAFLANKTARMMVFMYFISLHVLVFLTLYMWGH 871
            L FW   DL  + R  L+ QG  +K  K++++++RK+LAE TK++R+    +    GA  LLKAYQEEIDNLTRRA+ ++ AF  +Y+ LY APDP P L+   S    T  L  E  +L+RE++EY  EF  LKNQD+TIR L+E++ A ++E    +   VE+   E+E  L +AR+  A +R   E++LEA     +EA                           A+ +E E ++Q+    +  + E   L+K+LE  ++A S ++  +A               S + P + + S S      +Q E D   A +A +R   F  +E    A     E A+ L+  L+  ++ + ++E  +  RP +E+   + R++R+LQQLE+N                                VD+     +              G+  A+V   V  +L+SR+RR+E  +    R +         ++        K + Q+ L+  LE  +A  + K R                     + ++G     S +L               RG   A T D     T ++   PS                 +++I++ QRDR++ R++ L+ E          +K     +  DN+ LY K+R+LQ YG G  SGG R K        G                   AG     A   E RYR MYEE++NPF  F+  E  + + ++N VDKI L  A+  L ++  R M F Y + LH LV  TLY + H
Sbjct:   43 LQFWKAFDL-DSKRVLLDSQGSTMKSEKDASVRSRKKLAETTKQFRRLATDADKAAGAGPLLKAYQEEIDNLTRRAKFSENAFFQLYKGLYAAPDPAPALAMVASSSG-TDELAEENKKLKRELKEYAAEFASLKNQDITIRNLEEQVAAAKREREDAVHQQVEKRTRELEDQLENARLEWAQQRRDYERQLEASRAELREA----FAKMDAMQSDLFAHKQRSGLARNALDAEMEAISQDSLLTQTLQLENVQLKKQLEELLSASSPSEIFNAQ--------------SSALPSDDTGSESLQSAREMQAEQD---AVVAALRQEVFRLKEAHATASVAAVEEAKRLKTALENAQQKQKDLEAELAARPTIEKFHEVTRKLRVLQQLEYN-------------------------------IVDEDDNKSKTSSADAAESTGAVDGLEAATV--EVEQILVSRVRRLEHSLQECERTLQTRTXXXXTVQGELHDRNDKIREQATLIRNLEESVA-ALEKARRNR-----------------TSGVIGG-DIGSEILMDAMEDQFTGTSGSSRGNGVATTAD-----TASSSANPS-------------SDSKMLEIVRGQRDRFRERMKELQSEKNRVEELAQSYKSTVARLETDNMQLYHKIRYLQSYG-GDKSGGARIKPNFTALEDG------------------SAG-----AYDVEERYRGMYEEKMNPFVQFNKMENQQRFTNLNPVDKILLTSAKLLLGHRITRNMAFGYILLLHFLVVATLYSFMH 720          
BLAST of NO05G00020 vs. NCBI_GenBank
Match: XP_024579877.1 (protein casp-like [Plasmopara halstedii] >CEG43508.1 protein casp-like [Plasmopara halstedii])

HSP 1 Score: 183.7 bits (465), Expect = 2.500e-42
Identity = 214/812 (26.35%), Postives = 347/812 (42.73%), Query Frame = 0
Query:   69 SNEPSSYTNTSIVKPLEAALAFWTHLDLRGTCRSELERQGRELKEAKESTIKNRKRLAEATKEWRK---SSSSGKGAEDLLKAYQEEIDNLTRRARGADAAFANVYQALYDAPDPTPYLSTALSDRRVTASLEVELGRLQREIQEYEIEFRKLKNQDVTIRRLQEKLMAYEKEAAGDMAASVEEARAEIEALADARVREAVEREQRLEARLVVAQEAXXXXXXXXXXXXXXXXXXXXXXXXXXXAMGSEGELLAQERERHKAEADALRKELEAAVAAVSAAKRGDALLSMDGHISPASVS-FSLSAPVEGSSSSSSSKILALQNELDEMGASLALVRHRFFTKEEEWTQAQARMQETAEGLERELDKERKARAEVEEGMCRRPAMEEVVRLRRQIRMLQQLEFNGAXXXXXXXXXXXXXXXRARMNERQHPLPLKRVD---KCGQNCELVEEXXXXXXXXXXGVGEASVRRSVGHLLMSRLRRMETEVMASRRKVADMEGERKRLEEMKCVAEAKAQAQSVLVARLENDLA---RVVAKGRMGXXXXXXXXXXXXXEAICPAANLVGALSPFSHLLQTXXXXXXXXXXXQERGEALTVDMHELLTTAAKVAPSXXXXXXXXXXXXXXXXDLVQILQDQRDRYKCRVRTLEGELAAAGHEIGRFKVQAETMLRDNLTLYEKMRFLQCYGRGRSSGGRRGKQVLATASTGPTPLHQRQQGSGSPEGMMEAGDVLTIAAATEVRYRRMYEEQLNPFAAFSAAERFRNYQDMNVVDKITLQGARAFLANKTARMMVFMYFISLHVLVFLTLYMWGH 871
            S   SS +  S++  L+    FW   DL  + R  L+ QG  +K  K++++++RK+LAE+TK++R+    +    GA  LLK YQEEID+LTRRA+ ++ AF  +Y+ LY APDP P LS   S   +   ++ E  +L+R+++EY+ EF  LKNQ++TIR+L+E++ A E+     +   VE+   E+    D    E  ++ +  E +L  ++                             A+ +E E ++Q  +   A+   LRK++E               L     +S   V+  S+ +  +  +   S++ L  + E  E     A +R       E  T + A     AE L+  L+   +A+ ++E  +  RP  E+   + RQ+R+L+QLE+N                             ++ VD   K G+N E V+              EA+V   V  +LMSR+RR+E  +    R+V     + + ++            Q+ L+  LE  +A   +   K  +G                     ++G     S +L               R      D     TTA   + S                 +++I++ QRDR++ R++ L+ E          +K     +  DN+ LY K+R+LQ Y  G  S G R K  L             ++G+GS             A   E RYR MYEE++NPF  F+  E  + +  +N VDKI L  AR  L ++  R M F Y + LH LV  TLY + H
Sbjct:   24 SRHRSSASRLSVLPVLQ----FWKAFDL-DSKRVLLDSQGNTMKSEKDASVRSRKKLAESTKQFRRLTADADKAAGAGPLLKTYQEEIDHLTRRAKFSENAFFQLYKGLYAAPDPVPALSIVASSLEIDELVD-ENTKLKRKLKEYKAEFTSLKNQEITIRKLEEQVAATERNHEDFLYQQVEQRTKELVDQLDNAQLEWAQQRRDYERQLEASRTELRDAFAKMDAMQSNLFALKQRSGLARNALDAEMEAMSQTLQLENAQ---LRKQVEE--------------LHRSSVLSDVIVTQLSIHSNTDPETGVQSARELQAKQEQVE-----AALRQEIIRLNETLTTSSAAATVEAEQLKAALESAEQAQKDLEAQLALRPTCEKFNEMSRQLRILKQLEYN----------------------------VVEEVDVSSKAGENTEAVDR-----------FDEATV--EVEQILMSRVRRLEHALQECERRVHSRTIQVQSIQXXXXXXXXXXXEQANLIRDLEESVATLEKTQQKRTLG---------------------VIGG-DVGSEILMDAMEDQFTGPLVTARNHGAVAD-----TTAISTSSS--------------DGKMLEIVRGQRDRFRERIKELQNEKNRVEQLAQSYKSTVVRLETDNMQLYHKIRYLQSYKEGNKSVGPRIKPHLVL-----------EEGNGS-------------AYDVEARYRGMYEEKMNPFVQFNKMETQQRFTHLNPVDKILLTSARLLLGHRITRNMAFGYILLLHFLVVATLYSFMH 701          
BLAST of NO05G00020 vs. NCBI_GenBank
Match: XP_002901783.1 (CASP-like protein [Phytophthora infestans T30-4] >EEY57173.1 CASP-like protein [Phytophthora infestans T30-4])

HSP 1 Score: 176.0 bits (445), Expect = 5.200e-40
Identity = 217/792 (27.40%), Postives = 346/792 (43.69%), Query Frame = 0
Query:   88 LAFWTHLDLRGTCRSELERQGRELKEAKESTIKNRKRLAEATKEWRK---SSSSGKGAEDLLKAYQEEIDNLTRRARGADAAFANVYQALYDAPDPTPYLSTALSDRRVTASLEVELGRLQREIQEYEIEFRKLKNQDVTIRRLQEKLMAYEKEAAGDM-AASVEEARAEIEALADARVREAVER---EQRLEARLVVAQEAXXXXXXXXXXXXXXXXXXXXXXXXXXXAMGSEGELLAQERERHKAEADALRKELEAAVAAVSAAKRGDALLSMDGHISPASVSFSLSAPVEGSSSSSSSKILALQNELD-EMGASLALVRHRFFTKEEEWTQAQARMQETAEGLERELDKERKARAEVEEGMCRRPAMEEVVRLRRQIRMLQQLEFNGAXXXXXXXXXXXXXXXRARMNERQHPLPLKRVDKCGQNCELVEEXXXXXXXXXXGVGEASVRRSVGHLLMSRLRRMETEVMASRRKVADMEGERKRLEEMKCVAEAKAQAQSVLVARLENDLARVVAKGRMGXXXXXXXXXXXXXEAICPAANLVGALSPFSHLLQTXXXXXXXXXXXQERGEAL-TVDMHELLTTAAKVAPSXXXXXXXXXXXXXXXXDLVQILQDQRDRYKCRVRTLEGELAAAGHEIGRFKVQAETMLRDNLTLYEKMRFLQCYGRGRSSGGRRGKQVLATASTGPTPLHQRQQGSGSPEGMMEAGDVLTIAAATEVRYRRMYEEQLNPFAAFSAAERFRNYQDMNVVDKITLQGARAFLANKTARMMVFMYFISLHVLVFLTLYMWGH 871
            L FW   DL  + R  L+ QG  +K  K++++++RK+LAE TK++R+    +    GA  LLKAYQEEIDNLTRRA+ +++AF  +Y+ LY APDP P L+ A++    T  L  E  +L+RE++E+E+EF  LKNQD+TIR+L+E++ +  +E    +                +AR+  A +R   E++LEA     +EA                              ++ + +  +   HK  +   R   +A + A+S     D+LLS    +  A +   L    E  S+S+SS+I   ++E+  E  A +A +R   F  +E    A     E A+ L+  L+  ++A+ ++E  +  RP +E+   + R++R+LQQLE+N                    ++E +        D   +N E V+           G+  A+V   V  +L+SR+RR+E                                         E ++A  + K R                     A ++G     S +L               RG A+ T D     ++ + VA S                 +++I++ QRDR++ R++ L+ E          +K     +  DN+ LY K+R+LQ YG G  SG  R K                   S   +G   A DV       E RYR MYEE++NPF  F+  E  + + ++N VDKI L  A+  L ++  R M F Y + LH LVF TLY + H
Sbjct:   43 LQFWKAFDL-DSKRVLLDSQGSTMKSEKDASVRSRKKLAEMTKQFRRLATDTDKASGAGPLLKAYQEEIDNLTRRAKFSESAFFQLYKGLYAAPDPAPALA-AVASSSGTDDLAEENKKLKRELKEFEVEFASLKNQDITIRKLEEQVASAAREREDALHQXXXXXXXXXXXXXENARLEWAQQRRDYERQLEASRAELREAF-----------------------------AKMDAMQSDLFAHKQRSGLARNAFDAEMEAISQ----DSLLSQTLQLENAQLKKQLE---ELLSASTSSEIFDARSEMQAEQDAVVAALRQEVFRLKETHATASVAATEEAKRLKFALENAQQAQKDLEAQLASRPTIEKFHEVTRKLRVLQQLEYN-------------------IVDEDEERSKTSSTD-AAENNEAVD-----------GLEAATV--EVEQILVSRVRRLEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEENVA-ALEKARRNR-----------------TAGVIGG-DIGSEILLDAMEDQFTGTSGSSRGHAVATTD-----SSTSIVATS-------------SDSKMLEIVRGQRDRFRERMKELQAEKNRVEELAQSYKNTVARLETDNMQLYHKIRYLQSYG-GDKSGRARIK----------------PNFSALEDGSAGAYDV-------EARYRSMYEEKMNPFVQFNKMENQQRFTNLNPVDKILLTSAKLLLGHRITRNMAFGYILLLHFLVFATLYSFMH 702          
BLAST of NO05G00020 vs. NCBI_GenBank
Match: XP_024365175.1 (protein CASP-like [Physcomitrella patens] >PNR27645.1 hypothetical protein PHYPA_029797 [Physcomitrella patens])

HSP 1 Score: 173.7 bits (439), Expect = 2.600e-39
Identity = 200/794 (25.19%), Postives = 321/794 (40.43%), Query Frame = 0
Query:   83 PLEAALAFWTHLDLRGTCRSELERQGRELKEAKESTIKNRKRLAEATKEWRKSS--SSGKGAEDLLKAYQEEIDNLTRRARGADAAFANVYQALYDAPDPTPYLSTALSDRRVTASLEVELGRLQREIQEYEIEFRKLKNQD--------VTIRRLQEKLMAYEKEAAGDMAASVEEARAEIEALADARVREAVEREQRLEARLVVAQEAXXXXXXXXXXXXXXXXXXXXXXXXXXXAMGSEGELLAQERERHKAEADALRKELEAAVAAVSAAKRGDALLSMDGHISPASVSFSLSAPVEGSSSSSSSKILALQNELDEMGASLALVRHRFFTKEEEWTQAQARMQETAEGLERELDKERKARAEVEEGMCRRPAMEEVVRLRRQIRMLQQLEFNGAXXXXXXXXXXXXXXXRARMNERQHPLPLKRVDKCGQNCELVEEXXXXXXXXXXGVGEASVRRSVGHLLMSRLRRMETEVMASRRKVADMEGERKRLEEMKCVAEAKAQAQSVLVARLENDLARVVAKGRMGXXXXXXXXXXXXXEAICPAANLVGALSPFSHLLQTXXXXXXXXXXXQERGEALTVDMHELLTTAAKVAPSXXXXXXXXXXXXXXXXDLVQILQDQRDRYKCRVRTLEGELAAAGHEIGRFKVQAETMLRDNLTLYEKMRFLQCYGRGRSSGGRRGKQVLATASTGPTPLHQRQQGSGSPEGMMEAGDVLTIAAATEVRYRRMYEEQLNPFAAFSAAERFRNYQDMNVVDKITLQGARAFLANKTARMMVFMYFISLHVLVFLTLY 867
            P+   L+FW   DL    R++L++Q  E+ + +E+++KNR++LAE T+E++K+S     K A  LLK YQEE+DNLT+RA+  + AF ++YQ LY+A DP P L+T        A LE+E  ++++E++EY +E   LKNQ                               +  EE +  +E L D        RE+ L+ +L  A+E+                              SE  LL  E +R +A   +L +E E   + + A    D+ L               ++ +E S ++    I  L +EL  M  SL   R +   + ++     +      E L+RE+ +              RP  ++V  LR+Q+++LQ + +N                                          VE            +G+         LL+ + R+ME E+   + ++ +        ++     EAK   Q  L+ +LE D    + KG                          G      H+ Q+            +  +++  DM +  + + K A                   ++ ++  QRDR++ R+R  E EL  A           E    DN+ LYEKMRF+Q Y + R S GR GK+      +G T                  GDV       E +Y++MYE+ +NPF AFS  E+ R Y+++ + DKITL   R  L NK AR  +F Y I LH+LVF ++Y
Sbjct:   35 PIAQVLSFWKDFDLE-NWRTQLDKQALEIDKNQENSLKNRRKLAETTREYKKASVEEKIKSAPALLKGYQEEVDNLTKRAKFGENAFLHIYQKLYEAADPVPALTTGTESAAKVAELELENRKMKQELEEYRLEAAHLKNQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLAEENQKSLEILRD--------REEFLQGQLRAAKESVQNMQRLHEYGQSQLFELRAQSEEISANKQSELNLLTDEVDRAQARLLSLEREKEQLRSQLQAVHSQDSQLQ-------EXXDEEANSSLEASLTAKEKIISELHHELHTMETSLGSEREQHIAEVKKLKALLSEKDTALEELQREISE--------------RPTAKQVEDLRKQVKILQAVGYNS-----------------------------------------VEAEDWELATRGEDIGKLET------LLLDKNRKMEHELTQVKVQLLEKTQAASAADQKIHNLEAKVAEQKTLIVKLEED----ILKG-------------------------YGPSHDRRHVKQSDDW---------DLPDSVGSDMLD-HSGSGKAADE------------DEQNSMLTVICSQRDRFRTRLRETEEELRMARDRCQALTADLERSRADNVKLYEKMRFVQDYTQERPSKGRSGKKRGEDLESGVT------------------GDV-------ESKYKKMYEDDINPFTAFSKKEKERRYKELGIRDKITLTSGRFLLGNKYARTFIFFYSIGLHLLVFASMY 675          
BLAST of NO05G00020 vs. NCBI_GenBank
Match: OWZ22565.1 (hypothetical protein PHMEG_0002704 [Phytophthora megakarya])

HSP 1 Score: 168.7 bits (426), Expect = 8.300e-38
Identity = 224/812 (27.59%), Postives = 359/812 (44.21%), Query Frame = 0
Query:   73 SSYTNTSIVKPLEAALAFWTHLDLRGTCRSELERQGRELKEAKESTIKNRKRLAEATKEWRK---SSSSGKGAEDLLKAYQEEIDNLTRRARGADAAFANVYQALYDAPDPTPYLSTALSDRRVTASLEVELGRLQREIQEYEIEFRKLKNQDVTIRRLQEKLMAYEKEAAGDMAASVEEARAEIEALADAR----VREAVEREQRLEARLVVAQEAXXXXXXXXXXXXXXXXXXXXXXXXXXXAMGSEGELLAQERE------RHKAEADALRKELEAAVAAVSAAKRGDALLSMDGHISPASVSFSLSAPVEGSSSSSSSKILALQNELD-EMGASLALVRHRFFTKEEEWTQAQARMQETAEGLERELDKERKARAEVEEGMCRRPAMEEVVRLRRQIRMLQQLEFNGAXXXXXXXXXXXXXXXRARMNERQHPLPLKRVDKCGQNCELVEEXXXXXXXXXXGVGEASVRRSVGHLLMSRLRRMETEVMASRRKVADMEGERKRLEEMKCVAEAKAQAQSVLVARLENDLARVVAKGRMGXXXXXXXXXXXXXEAICPAANLVGALSPFSHLLQTXXXXXXXXXXXQERGEALTVDMHELLTTAAKVAPSXXXXXXXXXXXXXXXXDLVQILQDQRDRYKCRVRTLEGELAAAGHEIGRFKVQAETMLRDNLTLYEKMRFLQCYGRGRSSGGRRGKQVLATASTGPTPLHQRQQGSGSPEGMMEAGDVLTIAAATEVRYRRMYEEQLNPFAAFSAAERFRNYQDMNVVDKITLQGARAFLANKTARMMVFMYFISLHVLVFLTLYMWGH 871
            SS T  S++  L+    FW   DL  + R  L+ QG  +K  K++++++RK+LAE+TK++R+    +    GA  LLKAYQEEID+LTRRA+ ++ AF  +Y+ LY APDP P L+   S    T  L  E  +L+RE++EYE EF  LKNQD+ IR+L+E++ A                                +     E++LEA     +EA                               + +L A ++           ++   R  L+A + A+S     ++LLS    +  A +   L    E  S+S+SS+I   ++E+  E  A +A +R   F  +E    A A   E ++ L  EL+  ++A  ++E  +  RP +E+   + R++R+LQQLE+N                 R++ +       ++  D                     G+  A+V   V  +L+SR+RR+E  +    R +     + + ++      + K + Q+ L+  LE  +A  + K R                    A+ ++G     S +L               RG  +                +XXXXXXXXXXXXXXXX +++I++ QRDR++ R++ L+ E          +K     +  DN+ LY K+R+LQ YG    S   R K   +            + G+G              A+  E RYR MYEE++NPF  F+  E  + + ++N VDKI L  A+  L ++  R M F Y + LH LV  TLY + H
Sbjct:   32 SSATRQSVLPVLQ----FWKAFDL-DSKRVLLDSQGSTMKSDKDASVRSRKKLAESTKQFRRLAADADKAAGAGPLLKAYQEEIDHLTRRAKYSENAFFQLYKGLYAAPDPAPALAMVASSSG-TEDLTEENKKLKRELKEYEAEFASLKNQDIAIRKLEEQVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWAQXXXXYERQLEASRAELREAFARLD------------------------AMQSDLFAHKQRSGLAPGERSTQSGLARTALDAEMEAISQ----ESLLSQTLQLENAQLKKHLD---ELLSASTSSEIFDARSEIQAEQDAVVAALRQEVFRLKEAHVTANAASFEESKRLRNELESAQQACKDLEAQLTARPTIEKFHEVTRKLRVLQQLEYN----------IVDDDDERSKSSSMDASEDIEAAD---------------------GLEAATV--EVEKILVSRVRRLEHSLQECERTLQARTTQLQNVQSDLHDRDDKIREQATLIRSLEESVA-ALEKARRNR-----------------ASGVIGG-DIGSEILMDAMEDQFTGTSGPSRGNGV---------------GAXXXXXXXXXXXXXXXXKMLEIVRGQRDRFRERMKELQSEKNRVEELAQSYKSTVTRLETDNMQLYHKIRYLQSYGGASKSASSRVKPNFSAL----------EDGNGG-------------ASDVEARYRGMYEEKMNPFVQFNKMENQQRFTNLNPVDKILLTSAKLLLGHRITRNMAFGYILLLHFLVVATLYSFMH 716          
The following BLAST results are available for this feature:
BLAST of NO05G00020 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM28396.11.700e-6748.20protein casp [Nannochloropsis gaditana][more]
XP_008891689.13.200e-4527.80hypothetical protein PPTG_02376 [Phytophthora para... [more]
ETL43410.13.200e-4527.80hypothetical protein L916_06066 [Phytophthora para... [more]
ETL96593.13.200e-4527.80hypothetical protein L917_05945 [Phytophthora para... [more]
ETP47824.13.200e-4527.80hypothetical protein F442_06295 [Phytophthora para... [more]
ETI50126.19.200e-4527.80hypothetical protein F443_06249 [Phytophthora para... [more]
XP_024579877.12.500e-4226.35protein casp-like [Plasmopara halstedii] >CEG43508... [more]
XP_002901783.15.200e-4027.40CASP-like protein [Phytophthora infestans T30-4] >... [more]
XP_024365175.12.600e-3925.19protein CASP-like [Physcomitrella patens] >PNR2764... [more]
OWZ22565.18.300e-3827.59hypothetical protein PHMEG_0002704 [Phytophthora m... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL086nonsL086Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR118ngnoR118Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003922NSK003922Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G00020.1NO05G00020.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
scdAgene2178Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G00020.1NO05G00020.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G00020 ID=NO05G00020|Name=NO05G00020|organism=Nannochloropsis oceanica|type=gene|length=3083bp
CCCACTCAAAACGCGCATGGGCCCCTCGTCGCTTCTCCGACCGTACTCCC
TGTTATACTACATCTCTGACGCCCGCATGCCCCACAACACCACTTCTCCG
TAGGTTAAAAAGGGGTCAACCTGGATTTGGCCTCTGGAAGTATCCCGAGT
CTCCCGGACAGCTCAAGCCAGCACGATGATGATGCCCAACGTCGCTGCTA
CAGACACGCCCGCTAATTCCCATCCTGACGAGGTGGGGATTGACAATAGC
AGAGTTCAGCATGAAGGAATCGAAAATAGTAGCCGCATTGGTGCCATCGA
AGCCCCCATCCGGAAGTCTTCCTCCACCAGCACCGACGCCAGCAACAAAA
TGGGCCTCGCCTCCAAACTCACCATGTCCAGTAACGAACCTTCCTCGTAT
ACCAACACCAGCATTGTTAAGCCCCTCGAAGCCGCTCTGGCTTTTTGGAC
TCATCTAGATTTGCGGGGCACTTGTCGTAGCGAGTTGGAGCGGCAAGGCC
GTGAGCTGAAGGAGGCAAAGGAAAGCACAATCAAGAATCGGAAGCGCCTG
GCGGAGGCTACCAAGGAGTGGAGGAAGAGCAGCAGCAGTGGCAAGGGTGC
AGAGGACCTGCTCAAAGCCTATCAAGAGGAGATTGATAACCTAACCCGAC
GAGCCAGGGGTGCGGATGCTGCTTTTGCGAATGTCTACCAAGCATTGTAC
GACGCCCCCGATCCCACGCCCTACCTCTCCACGGCCCTCTCCGACCGGCG
GGTCACTGCTTCCCTGGAGGTGGAGCTGGGACGGCTACAACGGGAGATAC
AAGAGTATGAAATTGAATTTCGTAAGCTCAAGAACCAAGACGTGACCATC
CGACGCCTGCAGGAGAAACTGATGGCGTATGAAAAGGAGGCAGCGGGGGA
CATGGCCGCTTCGGTTGAAGAGGCGCGGGCCGAGATTGAAGCCCTGGCAG
ATGCCCGTGTTCGCGAGGCCGTGGAGCGAGAGCAGCGTCTAGAGGCCCGC
TTGGTGGTGGCACAGGAAGCCCAGGCTGTGGCGGAGGAGGGGCGTGCGCG
GGCACAGGCACAAGTGTTTGAGGTTGCGCGACAGGCAGAGGAGAGGGCAG
CGGCCATGGGAAGCGAGGGAGAACTGCTTGCCCAGGAGCGTGAACGACAC
AAAGCTGAGGCAGATGCTTTGAGAAAGGAATTAGAGGCTGCGGTGGCTGC
GGTGTCTGCGGCGAAAAGGGGGGATGCTTTATTAAGTATGGACGGACATA
TCTCACCTGCTTCTGTTTCCTTCTCCTTGTCCGCACCTGTAGAAGGCAGC
AGCAGCAGCAGCAGCAGCAAGATCTTAGCCCTCCAGAATGAACTAGATGA
GATGGGTGCATCTTTAGCTCTTGTCCGACACCGGTTTTTCACAAAAGAGG
AGGAATGGACGCAGGCCCAGGCGCGCATGCAGGAAACCGCGGAGGGTTTG
GAGAGAGAGCTGGATAAGGAGCGAAAGGCACGGGCTGAGGTAGAGGAAGG
AATGTGTCGGCGACCAGCCATGGAAGAAGTGGTGAGGTTGAGGAGGCAAA
TTCGAATGCTGCAGCAGTTGGAATTCAATGGCGCTGAGGAAGAGGAGGAA
GGAGAAGAGGCAGAAGGAGGGGAGAAAGGGAGGGCGAGGATGAACGAGAG
GCAACATCCTTTGCCTTTGAAAAGAGTAGACAAATGTGGGCAGAACTGTG
AGCTTGTCGAGGAGGAGGAAAATGAGGAGGAGGAGGGGAAGGGAGGGGTG
GGTGAAGCTAGTGTTCGTCGAAGTGTGGGACATTTATTGATGAGTCGTCT
TCGACGCATGGAGACGGAAGTCATGGCGAGCCGTCGCAAGGTGGCCGATA
TGGAGGGGGAACGAAAACGCCTAGAAGAGATGAAATGCGTTGCGGAGGCC
AAGGCACAGGCACAGTCTGTGCTCGTGGCGCGCTTGGAGAACGATCTTGC
GCGTGTGGTAGCCAAGGGGAGAATGGGAGGAGGGGGAGGAGAAGGAGATG
GAGGAGGAGAGGGGGAAGAGGCGATATGTCCTGCGGCCAATTTGGTCGGT
GCATTGTCGCCATTCTCTCACTTGCTCCAGACAGAACAGCAGCAGCAACA
ACAACAACAACCTATCCAAGAGAGAGGGGAGGCATTGACTGTGGACATGC
ATGAGCTTTTGACCACGGCAGCGAAAGTTGCTCCCTCCTCCTTCTCCTCT
TCCTCCTCTATCTCTGCGTCGACCTCTTCCTCGATCGACCTGGTGCAAAT
TCTACAAGACCAGCGAGATCGGTACAAATGCCGCGTCCGCACACTCGAGG
GCGAGCTAGCGGCTGCCGGCCATGAAATTGGGCGGTTTAAGGTTCAGGCT
GAAACCATGCTGCGAGACAACCTGACGCTGTACGAAAAGATGCGCTTCCT
TCAATGCTATGGAAGAGGAAGGAGTAGTGGAGGGCGGAGAGGGAAGCAGG
TCCTGGCGACAGCATCAACGGGGCCTACGCCGCTGCACCAACGCCAGCAA
GGGTCAGGTAGCCCGGAAGGAATGATGGAGGCGGGTGATGTCTTGACCAT
TGCCGCTGCAACGGAAGTCAGGTATCGGAGAATGTACGAAGAGCAATTGA
ACCCCTTTGCGGCATTTTCGGCGGCAGAGAGGTTCCGGAATTACCAGGAC
ATGAATGTAGTGGACAAGATCACCCTGCAGGGAGCGCGGGCCTTCCTGGC
CAACAAAACGGCTAGGATGATGGTGTTTATGTATTTTATCAGCCTGCATG
TGCTGGTCTTTTTGACGCTGTACATGTGGGGTCATCACCACTGTGCGGAC
TTGTACTACCCCAAGGACTCTCCCATGAGCATCCCGTCCGATGCCCAGAG
CTTTCAGGGGAATCACGGAGTAGAAAGGGAAGGGGGAATTCGGTGACAAA
TGACTTTGTTGTTACATTGGAAAAATTGACTTTCACACCAAAAAGAAAGC
AAGAGCTGGCTCAGTGACTTCTGATTTTTGTTTATCGTTGGTGAAGATGT
AATAATTCTGAAAGAAGATAGGTTTAGATCTTTCAGGGCGCTGGGAAAGA
AAATGTCTTAGTCTGAAAGTGCGTCGACTCATG
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protein sequence of NO05G00020.1

>NO05G00020.1-protein ID=NO05G00020.1-protein|Name=NO05G00020.1|organism=Nannochloropsis oceanica|type=polypeptide|length=907bp
MMMPNVAATDTPANSHPDEVGIDNSRVQHEGIENSSRIGAIEAPIRKSSS
TSTDASNKMGLASKLTMSSNEPSSYTNTSIVKPLEAALAFWTHLDLRGTC
RSELERQGRELKEAKESTIKNRKRLAEATKEWRKSSSSGKGAEDLLKAYQ
EEIDNLTRRARGADAAFANVYQALYDAPDPTPYLSTALSDRRVTASLEVE
LGRLQREIQEYEIEFRKLKNQDVTIRRLQEKLMAYEKEAAGDMAASVEEA
RAEIEALADARVREAVEREQRLEARLVVAQEAQAVAEEGRARAQAQVFEV
ARQAEERAAAMGSEGELLAQERERHKAEADALRKELEAAVAAVSAAKRGD
ALLSMDGHISPASVSFSLSAPVEGSSSSSSSKILALQNELDEMGASLALV
RHRFFTKEEEWTQAQARMQETAEGLERELDKERKARAEVEEGMCRRPAME
EVVRLRRQIRMLQQLEFNGAEEEEEGEEAEGGEKGRARMNERQHPLPLKR
VDKCGQNCELVEEEENEEEEGKGGVGEASVRRSVGHLLMSRLRRMETEVM
ASRRKVADMEGERKRLEEMKCVAEAKAQAQSVLVARLENDLARVVAKGRM
GGGGGEGDGGGEGEEAICPAANLVGALSPFSHLLQTEQQQQQQQQPIQER
GEALTVDMHELLTTAAKVAPSSFSSSSSISASTSSSIDLVQILQDQRDRY
KCRVRTLEGELAAAGHEIGRFKVQAETMLRDNLTLYEKMRFLQCYGRGRS
SGGRRGKQVLATASTGPTPLHQRQQGSGSPEGMMEAGDVLTIAAATEVRY
RRMYEEQLNPFAAFSAAERFRNYQDMNVVDKITLQGARAFLANKTARMMV
FMYFISLHVLVFLTLYMWGHHHCADLYYPKDSPMSIPSDAQSFQGNHGVE
REGGIR*
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Synonyms
Publications