NO04G05300, NO04G05300 (gene) Nannochloropsis oceanica

Overview
NameNO04G05300
Unique NameNO04G05300
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2069
Alignment locationchr4:1501689..1503757 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr4genomechr4:1501689..1503757 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
BLAST of NO04G05300 vs. NCBI_GenBank
Match: BAN02464.1 (hypothetical protein YM304_21500 [Ilumatobacter coccineus YM16-304])

HSP 1 Score: 119.4 bits (298), Expect = 3.800e-23
Identity = 92/280 (32.86%), Postives = 136/280 (48.57%), Query Frame = 0
Query:   12 AVILSIRSLAAAGS-FENFTLGTINLQQGWTVQDSFGTSVGTLFDQTIQDTQNSGRVWRMSNAHTTSGFSNHPFSPTTAQVAGEPGSSLWNDFGSDHTKPKNPPGYRANATIATFYTRVNFTSAT-GSPQPGLSLGLSLCAKQSNWCMTLIQLNDNGAGIDIVY--WDNTVNQFNSG-SIFSSTRIASGLSYTAVHSLEMVTYFKDGFNNDVVNIFLDGTLIHTGSTWEVYYYFLGDVDIQPRLQAVDSLLVRSSGTAQPEYEDGGFFFTEIDVSTYIPP 287
            A+   I S  A GS FE+F LG+++ Q GW +   +   V    D +        R  R+SNA T+ GF +  FS    + AGE  +    + G   T P+            +F    +F SA  G+ QPGLS+ +S   +     M  + + D   G+++ Y  +D T+    +    F  T +A+GL  TAVH+  +   F DG +NDVV +F+DGTL+HTG +WE Y+         P  + VDSLL R SGTA P     GF   ++ + +  PP
Sbjct:   11 AINTPIASADAVGSDFESFALGSVDGQDGWEISGPYDVEV---VDASATHPSLGNRSLRISNAVTSGGFGDQTFSKPLTEEAGETDA----ENGGKSTGPRQ----------TSFEAEWSFASAAPGAEQPGLSVVVS-PDRGDGGRMGWLGMTDTPTGLEVSYYGYDTTLGGTCADLDNFVFTTVATGLDRTAVHTARLRMGFNDGVDNDVVEVFVDGTLVHTGKSWEDYFRNCE----PPEPRTVDSLLFRVSGTAAPATSGFGFLIDDVSLESSSPP 268          
BLAST of NO04G05300 vs. NCBI_GenBank
Match: WP_041298197.1 (HYR domain-containing protein [Ilumatobacter coccineus])

HSP 1 Score: 119.4 bits (298), Expect = 3.800e-23
Identity = 92/280 (32.86%), Postives = 136/280 (48.57%), Query Frame = 0
Query:   12 AVILSIRSLAAAGS-FENFTLGTINLQQGWTVQDSFGTSVGTLFDQTIQDTQNSGRVWRMSNAHTTSGFSNHPFSPTTAQVAGEPGSSLWNDFGSDHTKPKNPPGYRANATIATFYTRVNFTSAT-GSPQPGLSLGLSLCAKQSNWCMTLIQLNDNGAGIDIVY--WDNTVNQFNSG-SIFSSTRIASGLSYTAVHSLEMVTYFKDGFNNDVVNIFLDGTLIHTGSTWEVYYYFLGDVDIQPRLQAVDSLLVRSSGTAQPEYEDGGFFFTEIDVSTYIPP 287
            A+   I S  A GS FE+F LG+++ Q GW +   +   V    D +        R  R+SNA T+ GF +  FS    + AGE  +    + G   T P+            +F    +F SA  G+ QPGLS+ +S   +     M  + + D   G+++ Y  +D T+    +    F  T +A+GL  TAVH+  +   F DG +NDVV +F+DGTL+HTG +WE Y+         P  + VDSLL R SGTA P     GF   ++ + +  PP
Sbjct:   23 AINTPIASADAVGSDFESFALGSVDGQDGWEISGPYDVEV---VDASATHPSLGNRSLRISNAVTSGGFGDQTFSKPLTEEAGETDA----ENGGKSTGPRQ----------TSFEAEWSFASAAPGAEQPGLSVVVS-PDRGDGGRMGWLGMTDTPTGLEVSYYGYDTTLGGTCADLDNFVFTTVATGLDRTAVHTARLRMGFNDGVDNDVVEVFVDGTLVHTGKSWEDYFRNCE----PPEPRTVDSLLFRVSGTAAPATSGFGFLIDDVSLESSSPP 280          
BLAST of NO04G05300 vs. NCBI_GenBank
Match: WP_095045611.1 (hypothetical protein [Candidatus Promineofilum breve] >CUS06327.1 exported protein of unknown function [Candidatus Promineofilum breve])

HSP 1 Score: 115.5 bits (288), Expect = 5.500e-22
Identity = 94/291 (32.30%), Postives = 142/291 (48.80%), Query Frame = 0
Query:   13 VILSIRSLAAAG-----SFENFTLGTINLQQGWTVQDSFGTSVGTLFDQTIQDTQNSG--------RVWRMSNAHTTSGFSNHPFSPTTAQVAGEPGSSLWNDFGSDHTKPKNPPGYRANATIATFYTRVNFTSATGSPQPGLSLGLSLCAKQSNWCMTLIQLNDNGAGIDIVYWDNTVNQFNS---GSIFSSTRIASGLSYTAVHSLEMVTYFKDGFNNDVVNIFLDGTLIHTGSTWEVYYYFLGDVDIQPR-LQAVDSLLVRSSGTAQPEYEDGGFFFTEIDVSTYIPP 287
            +++S+ +L A+       FE++T+G IN Q GW             FD  I +    G        R  R+SNA+T   F +  FS      AGE  +S  N+  S  T+    P Y A    A        ++  G+ QPGL +G+S   +     M+L +L D  AG+++ ++D    +  +   G  F    +A+GL+  AVH++ +   F DG NNDVV +++DG L+HTG++WE Y+      D +P   + VDSLL R+SGTA P     GF     +VS Y  P
Sbjct:   20 LLVSLGALTASADSQVIDFESYTVGNINGQDGW-------IKTNANFDAAIVNQSTFGLAYPAFGSRSLRISNAYTVGSFGDQTFSKPLVDEAGE--TSAANNGMSGGTR---QPYYEATFDFA--------STVPGAEQPGLMVGVS-PDRGDGARMSLFRLYDKPAGLEVEFYDFDQTRPGTCVDGLDFQPATVATGLARNAVHNVRITMNFIDGVNNDVVKVYVDGGLVHTGTSWEDYFR-----DCEPNPTRTVDSLLFRASGTAAPATSGNGFLID--NVSQYSGP 282          
BLAST of NO04G05300 vs. NCBI_GenBank
Match: PIR83989.1 (hypothetical protein COU18_01105 [Candidatus Kaiserbacteria bacterium CG10_big_fil_rev_8_21_14_0_10_51_14])

HSP 1 Score: 112.5 bits (280), Expect = 4.600e-21
Identity = 90/284 (31.69%), Postives = 132/284 (46.48%), Query Frame = 0
Query:   16 SIRSLAAAGSFENFTLGTINLQQGWTVQDSFGTSVGTLFDQTIQDTQNSGRVWRMSNAHTTSGFSNHPFSPTTAQVAGEPGSSLWNDFGSDHTKPKNPPGYRANATIATFYTRVNFTSATGSPQPGLSLGLSLCAKQSNWCMTLIQLNDNGAGIDIVYWDNTVNQFNSGSIFSSTRIASGLSYTAVHSLEMVTYFKDGFNNDVVNIFLDGTLIHTGSTWEVYYYFLGDVDIQPRL-----QAVDSLLVRSSGTAQPEYEDGGFFFTEIDV---STYIPPAVPVI 292
            S+ + AAA  FE++TLG I+ Q GW+    +   V + F      TQ+     R SNA T+  F +  FS +    AGE             T P    G+        F           S QPGL + +S   +     M+ +  +D   GI + ++D  V      ++FS T +A+GLS    H+ +    FK+G +NDVV I++DG L+HTG+TWE YY F  D +  P L     + VDSLL  + GTA P     G+    +++      IPPA  V+
Sbjct:   26 SVFADAAALDFESYTLGNIHGQDGWSKTGGYDVEVTSSFGVLGFGTQS----LRFSNAVTSGSFGDQTFSKSLVDEAGET------------TAPNG--GFSGGTRQNHFEAEFEIRPMQLSQQPGLFMSVS-PDRGDGARMSYLGFSDEADGIKVNFFD--VTSVTDPAVFSETIVATGLSRAVTHTAKFEIDFKNGPSNDVVKIYIDGVLVHTGTTWENYYRF--DDESNPGLAVNEGRTVDSLLFMARGTAAPTTLGLGYLIDNVELLSSMVVIPPATLVV 286          
BLAST of NO04G05300 vs. NCBI_GenBank
Match: OGG41797.1 (hypothetical protein A2837_01115 [Candidatus Kaiserbacteria bacterium RIFCSPHIGHO2_01_FULL_46_22])

HSP 1 Score: 103.2 bits (256), Expect = 2.800e-18
Identity = 76/268 (28.36%), Postives = 122/268 (45.52%), Query Frame = 0
Query:   16 SIRSLAAAGSFENFTLGTINLQQGWTVQDSFGTSVGTLFDQTIQDTQNSGRVWRMSNAHTTSGFSNHPFSPTTAQVAGEPGSSLWNDFGSDHTKPKNPPGYRANATIATFYTRVNFTSATGSPQPGLSLGLSLCAKQSNWCMTLIQLNDNGAGIDIVYWDNT-VNQFNSGSIFSSTRIASGLSYTAVHSLEMVTYFKDGFNNDVVNIFLDGTLIHTGSTWEVYYYFLGDVDIQPR-LQAVDSLLVRSSGTAQPEYEDGGFFFTEIDVS 282
            S+    +  +F+ F  GT+N Q  W+   S+   V      T    +   +  R+SNA T+  F N  F+  TA  AGE   +  N F ++       PG ++  T++             SP  G           +   M+ +   D   GID+V++D T      S + ++ T +A+ L     H+++ V  F DG  NDVV I++D  L HTG++WE YY +  + +     L  VD+L+ R+ GTA P  +  GF F  + +S
Sbjct:  198 SLTDSVSMTTFDTFATGTVNAQNSWSSTGSYDQEV---VPNTYGFEEFGCKSLRISNAVTSGAFGNQTFAAPTAGTAGESSVAANNHFEAEFDIASTMPGLQSGLTLSV------------SPDDG-----------NGSRMSYLSFTDTADGIDVVFYDVTNTGPLPSVTSWNDTEVAT-LDRDESHTIKFVMDFVDGPGNDVVKIYIDDVLAHTGTSWEDYYRYDAEQNGNGNALFGVDTLIFRAGGTAVPANDSNGFLFDNMSMS 438          
BLAST of NO04G05300 vs. NCBI_GenBank
Match: OGH16902.1 (hypothetical protein A2869_01580 [Candidatus Levybacteria bacterium RIFCSPHIGHO2_01_FULL_40_58] >OGH26338.1 hypothetical protein A3C30_04490 [Candidatus Levybacteria bacterium RIFCSPHIGHO2_02_FULL_40_18] >OGH31298.1 hypothetical protein A3E43_02745 [Candidatus Levybacteria bacterium RIFCSPHIGHO2_12_FULL_40_31] >OGH40800.1 hypothetical protein A2894_02180 [Candidatus Levybacteria bacterium RIFCSPLOWO2_01_FULL_40_64])

HSP 1 Score: 100.1 bits (248), Expect = 2.400e-17
Identity = 80/272 (29.41%), Postives = 128/272 (47.06%), Query Frame = 0
Query:   25 SFENFTLGTINLQQGWTVQDSFGTSVGTLFDQTIQDTQN----SGRVWRMSNAHTTSGFSNHPFSPTTAQVAGEPGSSLWNDFGSDHTKPKNPPGYRANATIATFYTRVNFTSATGSP--QPGLSLGLSLCAKQSNWCMTLIQLNDNGAGIDIVYWDNTVNQFNSGSIFSSTRIASGLSYTAVHSLEMVTYFKDGFNNDVVNIFLDGTLIHTGSTWEVYYYFLGDVDIQPRLQAVDSLLVRSSGTAQPEYEDGGFFFTEID-VSTYIPPAVP 290
            +FE ++ G ++ Q GWT   + G     ++D  +  +        R  R+SNA T+  F +  FS       GE           D T    P G R N     F T     SA   P  QPGL + +S   +     M+ +   D   G++I+++D  V   ++ + F  T + +     AVH++++V    DG +NDVV +++DGTL HTG++WE YY +  +   +   + V ++L R+ GTA PE    GF F  +  +S+  PP  P
Sbjct:   34 TFETYSFGNVHGQDGWTSAGAAGVGC-AMYDHAVDTSYGRPGFGARSLRISNAVTSGCFGDQTFSKPLTDSVGE----------VDATAGTFPEGTRQN----HFETEFQIASAADPPAYQPGLFVSVS-PDRGDGSRMSYVGFEDVADGLNIIFYD--VQGTSNPANFVLTDLGT-YDRNAVHTIKLVMDVFDGPSNDVVEVYIDGTLAHTGTSWENYYRYDSEASAEQSPRIVRTVLFRTGGTAVPETLGKGFLFDNLTLMSSTRPPEEP 286          
BLAST of NO04G05300 vs. NCBI_GenBank
Match: OGG86184.1 (hypothetical protein A2392_01850 [Candidatus Kaiserbacteria bacterium RIFOXYB1_FULL_46_14])

HSP 1 Score: 96.3 bits (238), Expect = 3.400e-16
Identity = 74/261 (28.35%), Postives = 115/261 (44.06%), Query Frame = 0
Query:   25 SFENFTLGTINLQQGWTVQDSFGTSVGTLFDQTIQDTQNSGRVWRMSNAHTTSGFSNHPFSPTTAQVAGEPGSSLWNDFGSDHTKPKNPPGYRANATIATFYTRVNFTSATGSPQPGLSLGLSLCAKQSNW---CMTLIQLNDNGAGIDIVYWDNTVNQFNSGSIFSSTRIASGLSYTAVHSLEMVTYFKDGFNNDVVNIFLDGTLIHTGSTWEVYYYFLGDVDIQPR-LQAVDSLLVRSSGTAQPEYEDGGFFFTEIDVS 282
            +F+ F  GT+N Q  W+    +   V      T   T+   +  R+SNA T   F +  F+  T   AGE   +  N F              A   IA             S  PGL  GL+L     +     M+ +   D   GID+V++D T      G+   + +  + L     H+++ V  F DG  ND+V I++DG+L HTG++WE YY +  +       L  VD+L+ R+ G+A P  ++ GF F  + +S
Sbjct:  180 TFDTFATGTVNAQNSWSATGPYDQEV---VPNTYGFTEFGCKSLRISNAVTNGAFGDQTFAAPTVTTAGESSVAANNHF-------------EAQFDIA-------------STMPGLQSGLALSVSPDDGNGSRMSYLSFTDTSDGIDVVFYDVTNAGPLPGTTSWNDQEIATLDRDESHTIKFVMDFVDGPANDIVKIYIDGSLAHTGTSWEDYYRYDAEQSGNGNALFPVDTLIFRAGGSAVPANDNKGFLFDNMSLS 411          
BLAST of NO04G05300 vs. NCBI_GenBank
Match: KKT98724.1 (Cna B domain protein [Candidatus Collierbacteria bacterium GW2011_GWC2_45_15] >KKU28771.1 Cna B domain protein [Candidatus Collierbacteria bacterium GW2011_GWE1_46_18])

HSP 1 Score: 94.7 bits (234), Expect = 1.000e-15
Identity = 90/297 (30.30%), Postives = 143/297 (48.15%), Query Frame = 0
Query:   25 SFENFTLGTINLQQGWTVQDSFGTSVGTLFDQTIQDTQNSGRVWRMSNAHTTSGFSNHPFSPTTAQVAGEPGSSLWNDFGSDHTKPKNPPGYRANATIATFYTRVNFTSATGSPQPGLSLGLSLCAKQSNWCMTLIQLNDNGAGIDIVYWDNTVNQFNSGSIFSSTRIASGLSYTAVHSLEMVTYFKDGFNNDVVNIFLDGTLIHTGSTWEVYYYFLGDVDIQPRLQAVDSLLVRSSGTAQPEYEDG-GFFFTEIDVSTYIPPAVPVILPTPV-GERVILQFDLTDGDSNNVSGQIE 320
            +F++F+LG++N Q GW V  S+   +    + T   ++   + +R+SNA  T  F +  FS +    AGE  +S  N+  S  T+  +            F  + +  SA  + Q GLS+ +S   +     M+ ++  D    I  VY+D+ V+ F    I +  R  S       ++++ V  F DG  ND+V I++DG+L HTG++WE YY    D +  P  + VDSLL+R+ GT      +G GF F    +S+     VPV     +  +      +LTDGD  N S Q E
Sbjct:  228 TFDSFSLGSVNGQGGWKVTGSYDQEI---VNNTYGLSEFGCKTFRLSNAVATGSFGDQTFSYSLGNEAGE--TSAQNNGLSGGTRQNH------------FEAQFDIASAISNQQTGLSISIS-PDRGDGARMSYLRFADQSDKIH-VYFDDYVSGFVETEIDTLNRNKS-------YTIKFVMDFVDGPANDIVKIYIDGSLKHTGTSWEDYY---RDFEHNP-TRTVDSLLLRAGGTGGVPGNNGKGFIFDNFSLSS-STVVVPVCGNGAIESDEQCDDGNLTDGDGCNSSCQTE 493          
BLAST of NO04G05300 vs. NCBI_GenBank
Match: XP_005852440.1 (elicitin-like protein 6 precursor, partial [Nannochloropsis gaditana CCMP526] >EKU23392.1 elicitin-like protein 6 precursor, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 92.0 bits (227), Expect = 6.500e-15
Identity = 40/88 (45.45%), Postives = 61/88 (69.32%), Query Frame = 0
Query:  351 FVLGTPPIYIDISTDAVISPPVLVCLTYATSAFPENTEPQIFHFIGERWVDATTRINTTAQIVCGEVQSLSPFAVGSLIITPDAFAVN 439
            F LG PP+YI IST A+    + +CL Y+ S FP  TEP++FHFI + W D TT +++ ++++CG V S SPFA+G ++ T DA +++
Sbjct:    1 FSLGNPPVYIFISTTAIFDGDIDLCLPYSKSTFPRGTEPRLFHFINDTWDDVTTEVDSESELLCGRVTSFSPFALG-IVATTDAPSIS 87          
BLAST of NO04G05300 vs. NCBI_GenBank
Match: PJE65569.1 (hypothetical protein COU91_00970 [Candidatus Saccharibacteria bacterium CG10_big_fil_rev_8_21_14_0_10_47_8])

HSP 1 Score: 90.5 bits (223), Expect = 1.900e-14
Identity = 70/264 (26.52%), Postives = 126/264 (47.73%), Query Frame = 0
Query:   26 FEN--FTLGTINLQQGWTVQDSFGTSVGTLFDQTIQDTQNSG---RVWRMSNAHTTSGFSNHPFSPTTAQVAGEPGSSLWNDFGSDHTKPKNPPGYRANATIATFYTRVNFTSATGSPQPGLSLGLSLCAKQSNWCMTLIQLNDNGAGIDIVYWD--NTVNQFNSGSIFSSTRIASGLSYTAVHSLEMVTYFKDGFNNDVVNIFLDGTLIHTGSTWEVYYYFLGDVDIQPRLQAVDSLLVRSSGTAQPEYEDGGFFFTEIDVST 283
            FEN  + +G+I+ Q GW+       +V   +DQ +  T   G   + +R+S+A T+  F +  F+       GE  S+      S  +       +     IA        ++     QPGL + +S   +     M+ ++  D  +GI++ + D   T N  N    F  T+IA+GL+    H++++     DG +NDVV +++DG L+HTG++WE YY F  +   +   + V ++++++ GTA P     GF F  + + +
Sbjct:   50 FENPPYIVGSISGQDGWS------NAVNPTYDQGVVSTSVPGFGSQAFRISDAVTSGSFGDWVFAKPLINSVGETAST-----ASTFSAGTKQGHFEMQFDIA--------STVPDGQQPGLHISVS-PDRGDGSRMSYLRFEDGASGINVFFDDVQGTTNPAN----FVETQIATGLNRAIPHTVKLTMDTLDGSSNDVVKVWIDGVLVHTGTSWENYYRFDTEAAAEQSPRIVKTVIIQARGTATPGNNTFGFLFDNLSLKS 289          
The following BLAST results are available for this feature:
BLAST of NO04G05300 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
BAN02464.13.800e-2332.86hypothetical protein YM304_21500 [Ilumatobacter co... [more]
WP_041298197.13.800e-2332.86HYR domain-containing protein [Ilumatobacter cocci... [more]
WP_095045611.15.500e-2232.30hypothetical protein [Candidatus Promineofilum bre... [more]
PIR83989.14.600e-2131.69hypothetical protein COU18_01105 [Candidatus Kaise... [more]
OGG41797.12.800e-1828.36hypothetical protein A2837_01115 [Candidatus Kaise... [more]
OGH16902.12.400e-1729.41hypothetical protein A2869_01580 [Candidatus Levyb... [more]
OGG86184.13.400e-1628.35hypothetical protein A2392_01850 [Candidatus Kaise... [more]
KKT98724.11.000e-1530.30Cna B domain protein [Candidatus Collierbacteria b... [more]
XP_005852440.16.500e-1545.45elicitin-like protein 6 precursor, partial [Nannoc... [more]
PJE65569.11.900e-1426.52hypothetical protein COU91_00970 [Candidatus Sacch... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR007ncniR007Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO04G05300.1NO04G05300.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|614801gene_11648Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO04G05300.1NO04G05300.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO04G05300 ID=NO04G05300|Name=NO04G05300|organism=Nannochloropsis oceanica|type=gene|length=2069bp
ATGCTCTCCATCTTCCGCTTAGAACATCTCATTGCCGTCATATTGTCAAT
Tgtaagtcaatatttgtctgagggaaacgggagagggtaagcagagacaa
gagcaatgctatctctgaccacgtataattcatttactatgattgcttaa
ataaagCGTTCTCTAGCCGCTGCGGGATCTTTCGAGAACTTTACGCTTGG
GACCATCAACCTGCAGCAGGGCTGGACAGTGCAAGATTCATTTGGGACCT
CTGTCGGCACCCTTTTTGATCAAACAATCCAGGACACCCAGAATAGCGGC
CGTGTGTGGCGCATGTCAAATGCCCATACAACTTCTGGGTTTTCCAATCA
TCCCTTTTCGCCCACGACAGCACAAGTGGCAGGTGAACCGGGCAGTAGCC
TTTGGAACGACTTTGGGAGCGACCATACCAAGCCTAAAAATCCACCGGGC
TACCGAGCCAATGCCACGATCGCCACCTTCTACACGCGCGTGAATTTCAC
GTCCGCCACGGGATCCCCCCAGCCGGGTCTTTCCTTGGGACTGTCCCTGT
GTGCCAAGCAGTCAAACTGGTGCATGACCTTGATCCAGCTGAATGACAAC
GGTGCGGGTATCGATATCGTTTACTGGGATAATACGGTGAACCAGTTTAA
TAGCGGTTCTATATTCAGCAGCACTCGTATCGCCTCTGGCTTATCCTACA
CTGCGGTTCACTCCCTGGAGATGGTTACATACTTCAAAGATGGATTTAAT
AATGACGTTGTCAATATCTTTCTGGACGGCACCCTTATTCATACCGGCAG
CACATGGGAGGTATATTACTACTTTTTGGGAGACGTGGACATCCAGCCGC
GTCTTCAGGCAGTTGACTCACTTCTAGTACGATCCAGTGGGACGGCGCAG
CCAGAATACGAAGATGGAGGCTTTTTTTTTACTGAGATAGATGTATCCAC
GTATATCCCTCCCGCAGTACCAGTAATACTGCCCACTCCCGTCGGGGAAA
GAGTGATTTTGCAATTTGATCTGACTGATGGCGATAGCAACAATGTCAGT
GGACAGATTGAATTCGCCGAGGTCACCAGCCCCGGATTCACGgtaagcga
acacatgatgatgtgcgtaggaagatgcaccctaccggtgcgcccgtctt
cagtgtaatttctttgcccatcttacgagtccaccccgaatacctcgcgc
tgccgccactgcggccatttttatctcctcctgactcccactactcgtca
ataacttctctctcatcgttcaatgaacagACTTTTACCAATGTGAACGT
CACCGCTGGTGAGGCGGATCCATTGTATGTGCCGCCAAGCAATTTTGTCC
TCGGCACCCCTCCCATCTATATTGACATTTCTACCGACGCTGTCATTTCA
CCTCCAGTCCTTGTCTGCTTGACATACGCAACCAGCGCCTTTCCCGAGAA
TACAGAACCACAAATATTTCATTTTATTGGAGAACGGTGGGTGGATGCGA
CCACTCGCATCAATACGACGGCCCAAATTGTCTGCGGTGAGGTCCAGTCT
CTTAGTCCTTTTGCGGTAGGCTCCCTTATCATCACGCCTGATGCTTTCGC
GGTCAATCGCCTTCGACTAAAAGACAAGCAAAACCAAAAGGATGCCTGGA
CTTTGTCGGGCCTATTCGAGACCGCTAATATCACGACCAATGATCTGCTC
GAGGCTATGGACGGGAAAGGAGTCCAGTTTGAAGTGTATGGCCAGCAGGG
ACTCATCAGCAGCGTAGTCTTCGAGGGCAAAAATTGTCGTCGCATAGGGA
GGTCAGCTTCTACCGAAAAGCTCTCATGCCGTATGAAGCAGGGACAGATA
TCGACAACTGCTCGTGCCACCTTCAAGCAGTACAAGCAGAGTAGCCGCCT
CTTCGTTAAAGCCACATTTTCGGGATGTACTTTTGACATCACGACATCGC
TCAGATCTCTCACCCCCTTAAAGGTCCGAATCATAACACCAACTAGCCTT
GGAGCACTTGACTCTCCTTCACTTCGCTGCAAAGAATCCTCGTCCAGGAT
GCGCTGCGTTGCAGCTTAA
back to top

protein sequence of NO04G05300.1

>NO04G05300.1-protein ID=NO04G05300.1-protein|Name=NO04G05300.1|organism=Nannochloropsis oceanica|type=polypeptide|length=592bp
MLSIFRLEHLIAVILSIRSLAAAGSFENFTLGTINLQQGWTVQDSFGTSV
GTLFDQTIQDTQNSGRVWRMSNAHTTSGFSNHPFSPTTAQVAGEPGSSLW
NDFGSDHTKPKNPPGYRANATIATFYTRVNFTSATGSPQPGLSLGLSLCA
KQSNWCMTLIQLNDNGAGIDIVYWDNTVNQFNSGSIFSSTRIASGLSYTA
VHSLEMVTYFKDGFNNDVVNIFLDGTLIHTGSTWEVYYYFLGDVDIQPRL
QAVDSLLVRSSGTAQPEYEDGGFFFTEIDVSTYIPPAVPVILPTPVGERV
ILQFDLTDGDSNNVSGQIEFAEVTSPGFTTFTNVNVTAGEADPLYVPPSN
FVLGTPPIYIDISTDAVISPPVLVCLTYATSAFPENTEPQIFHFIGERWV
DATTRINTTAQIVCGEVQSLSPFAVGSLIITPDAFAVNRLRLKDKQNQKD
AWTLSGLFETANITTNDLLEAMDGKGVQFEVYGQQGLISSVVFEGKNCRR
IGRSASTEKLSCRMKQGQISTTARATFKQYKQSSRLFVKATFSGCTFDIT
TSLRSLTPLKVRIITPTSLGALDSPSLRCKESSSRMRCVAA*
back to top
Synonyms
Publications