NO04G05230, NO04G05230 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO04G05230 vs. NCBI_GenBank
Match: EWM28906.1 (hypothetical protein Naga_101190g4 [Nannochloropsis gaditana]) HSP 1 Score: 209.5 bits (532), Expect = 1.400e-50 Identity = 96/127 (75.59%), Postives = 105/127 (82.68%), Query Frame = 0 Query: 1 MRPPALPNARLLWAFDFDGVLCHSAKELCLTGWAAAQEFWPSETQTWPKRPGPATLSSFYRVRPVVETGWEVMLINRALQEGEYSADTILKEYTASLRESLMKEYGGHAPEAYMDTFRSVRQAWMTR 128 MRP P ARLLWAFDFDGVLCHSAKELC+TGW AA+ FWPSE +WP RP P LSSF VRPVVETGWE MLI RAL EGEYS +TILK+YTASLRE+L+KEYG + PEAYM+TFRSVRQ WM R Sbjct: 1 MRPSVPPPARLLWAFDFDGVLCHSAKELCMTGWVAARRFWPSEAHSWPDRPDPNILSSFATVRPVVETGWESMLITRALHEGEYSTETILKDYTASLRETLIKEYGEYPPEAYMETFRSVRQEWMNR 127
BLAST of NO04G05230 vs. NCBI_GenBank
Match: XP_002989896.1 (uncharacterized protein LOC9629979 isoform X2 [Selaginella moellendorffii] >EFJ08909.1 hypothetical protein SELMODRAFT_130886 [Selaginella moellendorffii]) HSP 1 Score: 159.5 bits (402), Expect = 1.700e-35 Identity = 105/285 (36.84%), Postives = 144/285 (50.53%), Query Frame = 0 Query: 9 ARLLWAFDFDGVLCHSAKELCLTGWAAAQEFWPSETQTWPKRPGPATLSSFYRVRPVVETGWEVMLINRALQEGE--------YSADTILKEYTASLRESLMKEYG-GHAPEAYMDTFRSVRQAWMTRDERGWLSENDFYPTAVSSIKHLLSSHPPSSPSTYIVTTKGKEF-TLKLLEGMGVAMPESCVFGLGSGKKVDVLQQLLDKYDAESKAREGKEKKEAKEGDMETRVIFIEDRLQTLLGILDHPSPDVRDRADLLLAGWGYNTAEERAVAASHPSITYLE 284 A L+A DFDGVLC S E + G AA++ WP + + L + VRPVVETG + +L+ R L + E + IL+ +T S++ S M+E G + D SVR AW++RD GWL N FYP +IK SS +IVTTK F T+ L E GV PE ++GLGSG KV+VL++L ++ + + + F+EDRL TLL ++D V + +L LA WGYNT ER A+ P I LE Sbjct: 2 AEHLYALDFDGVLCDSCGEASIAGLEAAKQRWPEHFKRVDAQREAEILERMHTVRPVVETGDDFLLLARVLAKVENGTSIASHLDEENILESWTESIKRSFMEEIGEARHKQELEDLLGSVRDAWISRDVHGWLKANRFYPGISDAIKF-------SSSKLFIVTTKEARFVTMSLKELAGVDFPEENIYGLGSGPKVEVLKKLQNRAEHQGMT-----------------LHFVEDRLSTLLNVID---DRVLNNWNLHLASWGYNTPTEREEASKKPRIEVLE 259
BLAST of NO04G05230 vs. NCBI_GenBank
Match: XP_002968647.1 (uncharacterized protein LOC9651508 isoform X1 [Selaginella moellendorffii] >EFJ29763.1 hypothetical protein SELMODRAFT_91208 [Selaginella moellendorffii]) HSP 1 Score: 158.7 bits (400), Expect = 2.800e-35 Identity = 107/285 (37.54%), Postives = 145/285 (50.88%), Query Frame = 0 Query: 9 ARLLWAFDFDGVLCHSAKELCLTGWAAAQEFWPSETQTWPKRPGPATLSSFYRVRPVVETGWEVMLINRALQEGE--------YSADTILKEYTASLRESLMKEYG-GHAPEAYMDTFRSVRQAWMTRDERGWLSENDFYPTAVSSIKHLLSSHPPSSPSTYIVTTKGKEF-TLKLLEGMGVAMPESCVFGLGSGKKVDVLQQLLDKYDAESKAREGKEKKEAKEGDMETRVIFIEDRLQTLLGILDHPSPDVRDRADLLLAGWGYNTAEERAVAASHPSITYLE 284 A L+A DFDGVLC S E + G AA++ WP + + L + VRPVVETG + +L+ R L + E + IL+ +T S++ S M+E G + D SVR AW++RD GWL N FYP +IK SS +IVTTK F T+ L E GV PE ++GLGSG KV+VL++L ++ AE + + F+EDRL TLL ++D V + +L LA WGYNT ER A+ P I LE Sbjct: 2 AEHLYALDFDGVLCDSCGEASIAGLEAAKQRWPEHFKRVDAQREAEILERMHTVRPVVETGDDFLLLARVLAKVENGTSIASHLDEENILESWTESIKRSFMEEIGEARHKQELEDLLGSVRDAWISRDVHGWLKTNRFYPGISDAIKF-------SSSKLFIVTTKEARFVTMSLKELAGVDFPEENIYGLGSGPKVEVLKKLQNR--AEHRG---------------MTLHFVEDRLSTLLNVID---DRVLNNWNLHLASWGYNTPTEREEASKKPRIEVLE 259
BLAST of NO04G05230 vs. NCBI_GenBank
Match: WP_044136779.1 (haloacid dehalogenase [Trichodesmium erythraeum]) HSP 1 Score: 149.4 bits (376), Expect = 1.700e-32 Identity = 101/281 (35.94%), Postives = 140/281 (49.82%), Query Frame = 0 Query: 14 AFDFDGVLCHSAKELCLTGWAAAQEFWPSETQTWPKRPGPATLSSFYRVRPVVETGWEVMLINRALQEGEYSADTILKEYTASLRESLMKEYGGHAPEAYMDTFRSVRQAWMTRDERGWLSENDFYPTAVSSIKHLLSSHPPSSPSTYIVTTKGKEFTLKLLEGMGVAMPESCVFGLGSGK-KVDVLQQLLDKYDAESKAREGKEKKEAKEGDMETRVIFIEDRLQTLLGILDHPSPDVRDRADLLLAGWGYNTAEERAVAASHPSITYLETERALLDYVK 294 A DFDGVLC+ E T W +FW Q + P + FYR+RPV+E GWE+ L+ RAL G DTI +E+ A + +++E P + R W+ +D GWLS + FYP V +K L+ S I+TTK F LL +GV +PE+ + G S + K + L+ LL K A T + FIEDRL+TLL I H PD+++ +L LA WGYNT +ER A +PSI L + + D+ K Sbjct: 10 ALDFDGVLCNGLSEYFQTAWRTYSQFW----QISDEIPLNDLMEKFYRLRPVIEIGWEMPLLIRALILG-IEEDTIFQEWQAIAEKIVIQE--NLDPWKIGACLDNTRDEWIVKDLEGWLSLHQFYPGVVEKLKELM----VSEVKPIIITTKEGRFARSLLHKVGVNLPEADIIGKESKRPKYETLKILLAKLGA------------------RTTIWFIEDRLKTLLSIQKH--PDLQE-VELFLADWGYNTQKERNSVAQYPSIHLLSSAQFCQDFSK 258
BLAST of NO04G05230 vs. NCBI_GenBank
Match: ABG51809.1 (Haloacid dehalogenase-like hydrolase [Trichodesmium erythraeum IMS101]) HSP 1 Score: 149.4 bits (376), Expect = 1.700e-32 Identity = 101/281 (35.94%), Postives = 140/281 (49.82%), Query Frame = 0 Query: 14 AFDFDGVLCHSAKELCLTGWAAAQEFWPSETQTWPKRPGPATLSSFYRVRPVVETGWEVMLINRALQEGEYSADTILKEYTASLRESLMKEYGGHAPEAYMDTFRSVRQAWMTRDERGWLSENDFYPTAVSSIKHLLSSHPPSSPSTYIVTTKGKEFTLKLLEGMGVAMPESCVFGLGSGK-KVDVLQQLLDKYDAESKAREGKEKKEAKEGDMETRVIFIEDRLQTLLGILDHPSPDVRDRADLLLAGWGYNTAEERAVAASHPSITYLETERALLDYVK 294 A DFDGVLC+ E T W +FW Q + P + FYR+RPV+E GWE+ L+ RAL G DTI +E+ A + +++E P + R W+ +D GWLS + FYP V +K L+ S I+TTK F LL +GV +PE+ + G S + K + L+ LL K A T + FIEDRL+TLL I H PD+++ +L LA WGYNT +ER A +PSI L + + D+ K Sbjct: 12 ALDFDGVLCNGLSEYFQTAWRTYSQFW----QISDEIPLNDLMEKFYRLRPVIEIGWEMPLLIRALILG-IEEDTIFQEWQAIAEKIVIQE--NLDPWKIGACLDNTRDEWIVKDLEGWLSLHQFYPGVVEKLKELM----VSEVKPIIITTKEGRFARSLLHKVGVNLPEADIIGKESKRPKYETLKILLAKLGA------------------RTTIWFIEDRLKTLLSIQKH--PDLQE-VELFLADWGYNTQKERNSVAQYPSIHLLSSAQFCQDFSK 260
BLAST of NO04G05230 vs. NCBI_GenBank
Match: XP_018436617.1 (PREDICTED: uncharacterized protein LOC108808997 [Raphanus sativus]) HSP 1 Score: 141.4 bits (355), Expect = 4.700e-30 Identity = 97/285 (34.04%), Postives = 139/285 (48.77%), Query Frame = 0 Query: 12 LWAFDFDGVLCHSAKELCLTGWAAAQEFWPSETQTWPKRPGPATLSSFYRVRPVVETGWEVMLINRALQEGE------------YSADTILKEYTASLRESLMKEYGGHAPEAYMDTFRSVRQAWMTRDERGWLSENDFYPTAVSSIKHLLSSHPPSSPSTYIVTTKGKEFTLKLL-EGMGVAMPESCVFGLGSGKKVDVLQQLLDKYDAESKAREGKEKKEAKEGDMETRVIFIEDRLQTLLGILDHPSPDVRDRADLLLAGWGYNTAEERAVAASHPSITYLE 284 L+A DFDGVLC S E L+ AA+ WP Q + + VRPVVETG+E +L+ R L E + + D IL+ + ++ +M+ +G EA +D F VR W+ D W+ N FYP ++K +S YIVTTK F LL E GV +P ++GLG+G KV+VL+ L +K + + ++ F+EDRL TL ++ P D+ +L L+ WGYNT +ERA A S P I +E Sbjct: 4 LYALDFDGVLCDSCGESSLSAVKAARARWPGLFQGVDSALEEWIVDQMHTVRPVVETGYENLLLVRLLLETKMPSIRKSSVAEGLTVDGILESW-GKIKPVIMEAWGEEDKEALIDLFGKVRDDWINNDLTTWIGANRFYPGVSDALKF-------ASSKIYIVTTKQGRFAEALLREIAGVIIPPERIYGLGTGPKVEVLKLLQNKPEHQG-----------------LKLHFVEDRLATLKNVIKEPE---LDKWNLYLSNWGYNTEKERAEAESIPRIQVIE 260
BLAST of NO04G05230 vs. NCBI_GenBank
Match: XP_018859721.1 (PREDICTED: uncharacterized protein LOC109021532 [Juglans regia]) HSP 1 Score: 140.6 bits (353), Expect = 8.000e-30 Identity = 106/303 (34.98%), Postives = 148/303 (48.84%), Query Frame = 0 Query: 12 LWAFDFDGVLCHSAKELCLTGWAAAQEFWP-------SETQTWPKRPGPATLSSFYRVRPVVETGWEVMLINRALQEGEYSA------------DTILKEYTASLRESLMKEYGGHAPEAYMDTFRSVRQAWMTRDERGWLSENDFYPTAVSSIKHLLSSHPPSSPSTYIVTTKGKEFTLKLL-EGMGVAMPESCVFGLGSGKKVDVLQQLLDKYDAESKAREGKEKKEAKEGDMETRVIFIEDRLQTLLGILDHPSPDVRDRADLLLAGWGYNTAEERAVAASHPSITYLETERALLDYVKE 295 L+A DFDGVLC S E L+ AA+ WP S T+ W + Y VRPVVETG+E +L+ R L E A D IL+ + + L+ +M+E+ +A +D F VR W+ +D R W+ N FYP ++K +S YIVTTK F LL E GV +P ++GLG+G KV+VL+QL +KK +G + F+EDRL TL ++ P D +L L WGYNT +ER AA+ P + L+ L D+ K+ Sbjct: 4 LYALDFDGVLCDSCGESSLSAVKAAKVKWPTLFDGVDSTTEDW-------IVDQMYIVRPVVETGYENLLLVRLLLEMRIPAIRKSSVSEGLTVDGILENW-SKLKPVIMEEW-DEKKDALVDLFGKVRDEWLEKDLRTWIGANRFYPGVPDALKF-------ASSKLYIVTTKQSRFADALLRELAGVTIPSERIYGLGTGPKVEVLKQL--------------QKKPEHQG---LTLHFVEDRLATLKNVIKEPE---LDGWNLYLGDWGYNTQKERDEAATIPRVHLLQ----LSDFTKK 266
BLAST of NO04G05230 vs. NCBI_GenBank
Match: XP_002461895.1 (uncharacterized protein LOC8057932 [Sorghum bicolor] >EER98416.1 hypothetical protein SORBI_3002G116900 [Sorghum bicolor]) HSP 1 Score: 140.2 bits (352), Expect = 1.000e-29 Identity = 100/295 (33.90%), Postives = 143/295 (48.47%), Query Frame = 0 Query: 2 RPPALPNARLLWAFDFDGVLCHSAKELCLTGWAAAQEFWPSETQTWPKRPGPATLSSFYRVRPVVETGWEVMLINRALQEGE------------YSADTILKEYTASLRESLMKEYGGHAPEAYMDTFRSVRQAWMTRDERGWLSENDFYPTAVSSIKHLLSSHPPSSPSTYIVTTKGKEFTLKLLEGM-GVAMPESCVFGLGSGKKVDVLQQLLDKYDAESKAREGKEKKEAKEGDMETRVIFIEDRLQTLLGILDHPSPDVRDRADLLLAGWGYNTAEERAVAASHPSITYLE 284 RPP L+A DFDGVLC S E L+ AA+ WPS + + Y +RPVVETG+E +L+ R L E + S IL+ + L+ +LM E+ E+ +D F VR W+ D GW+ N FYP ++K SS TYIVTTK F LL+ + G+ P ++GLG+G KV VLQQL ++ +G ++ F+EDRL TL ++ P+ D+ +L L WGYNT +ER A + P + ++ Sbjct: 62 RPPRAAMGGDLYALDFDGVLCDSCGESSLSAVKAAKVRWPSLFEQVDAAMEEWIVEQMYTLRPVVETGYENLLLVRLLVEIQIPSVRKSSVADGLSIQEILENW-LKLKPTLMDEW-QEDRESLVDLFGRVRDDWIENDFSGWIGANRFYPGTADALK-------LSSSETYIVTTKQSRFAEALLKELAGIDFPSERIYGLGTGPKVKVLQQL--------------QQMPQNQG---LKLHFVEDRLATLKNVIKEPA---LDKWNLYLVTWGYNTQKEREEAEAIPRVQLID 327
BLAST of NO04G05230 vs. NCBI_GenBank
Match: XP_002989978.1 (uncharacterized protein LOC9629359 isoform X2 [Selaginella moellendorffii] >EFJ08991.1 hypothetical protein SELMODRAFT_428440 [Selaginella moellendorffii]) HSP 1 Score: 140.2 bits (352), Expect = 1.000e-29 Identity = 102/291 (35.05%), Postives = 141/291 (48.45%), Query Frame = 0 Query: 12 LWAFDFDGVLCHSAKELCLTGWAAAQEFWP-------SETQTWPKRPGPATLSSFYRVRPVVETGWEVMLINRALQE------GEYSADTILK-----EYTASLRESLMKEYGGHAPEAYMDTFRSVRQAWMTRDERGWLSENDFYPTAVSSIKHLLSSHPPSSPSTYIVTTKGKEFTLKLLEGM-GVAMPESCVFGLGSGKKVDVLQQLLDKYDAESKAREGKEKKEAKEGDMETRVIFIEDRLQTLLGILDHPSPDVRDRADLLLAGWGYNTAEERAVAASHPSITYLE 284 L+A DFDGVLC S E ++ AA+ WP +ET W L S VRPVVETG+E +L+ R L E G+ S L E L+ LMKE+G + + ++ F +VR W+++D W+S N FYP S+K S +IVTTK F LL+ + GV P +FGLG+G KV+VL+QL + + + + F+EDRL TL ++ P+ DR +L L WGYNT ER AA+ I L+ Sbjct: 7 LYALDFDGVLCDSCGESSISALKAAKLRWPELFANVSAETDAW-------ILDSMRTVRPVVETGYENVLLVRLLLELKEPHRGKSSVVNGLTVEGVLENWEKLKPVLMKEWGEASRDELVELFGNVRDEWISKDLGTWISANRFYPGIADSLKFATS-------RVFIVTTKQARFAATLLKELAGVDFPTDKIFGLGTGPKVEVLKQLQSRPEHQGMI-----------------LHFVEDRLATLHNVIKDPA---LDRWNLYLGNWGYNTPAEREAAAAITRIQVLD 263
BLAST of NO04G05230 vs. NCBI_GenBank
Match: XP_002968931.1 (uncharacterized protein LOC9651482 isoform X1 [Selaginella moellendorffii] >EFJ30047.1 hypothetical protein SELMODRAFT_90693 [Selaginella moellendorffii]) HSP 1 Score: 140.2 bits (352), Expect = 1.000e-29 Identity = 101/291 (34.71%), Postives = 140/291 (48.11%), Query Frame = 0 Query: 12 LWAFDFDGVLCHSAKELCLTGWAAAQEFWP-------SETQTWPKRPGPATLSSFYRVRPVVETGWEVMLINRALQE------GEYSADTILK-----EYTASLRESLMKEYGGHAPEAYMDTFRSVRQAWMTRDERGWLSENDFYPTAVSSIKHLLSSHPPSSPSTYIVTTKGKEFTLKLLEGM-GVAMPESCVFGLGSGKKVDVLQQLLDKYDAESKAREGKEKKEAKEGDMETRVIFIEDRLQTLLGILDHPSPDVRDRADLLLAGWGYNTAEERAVAASHPSITYLE 284 L+A DFDGVLC S E ++ AA+ WP +ET W L S VRPVVETG+E +L+ R L E G+ S L E L+ LMKE+G + + ++ F VR W+++D W+S N FYP S+K S +IVTTK F LL+ + GV P +FGLG+G KV+VL+QL + + + + F+EDRL TL ++ P+ DR +L L WGYNT ER AA+ + L+ Sbjct: 7 LYALDFDGVLCDSCGESSISALKAAKLRWPELFANVSAETDAW-------ILDSMRTVRPVVETGYENVLLVRLLLELKEPHRGKSSVVNGLTVEGVLENWEKLKPVLMKEWGEASRDELVELFGKVRDEWISKDLGTWISANRFYPGTADSLKFATS-------QVFIVTTKQARFAATLLKELGGVDFPTDKIFGLGTGPKVEVLKQLQSRPEHQGMI-----------------LHFVEDRLATLHNVIKDPA---LDRWNLYLGNWGYNTPAEREAAAAITRVQVLD 263 The following BLAST results are available for this feature:
BLAST of NO04G05230 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO04G05230 ID=NO04G05230|Name=NO04G05230|organism=Nannochloropsis oceanica|type=gene|length=3567bpback to top protein sequence of NO04G05230.1 >NO04G05230.1-protein ID=NO04G05230.1-protein|Name=NO04G05230.1|organism=Nannochloropsis oceanica|type=polypeptide|length=300bpback to top protein sequence of NO04G05230.2 >NO04G05230.2-protein ID=NO04G05230.2-protein|Name=NO04G05230.2|organism=Nannochloropsis oceanica|type=polypeptide|length=267bpback to top protein sequence of NO04G05230.3 >NO04G05230.3-protein ID=NO04G05230.3-protein|Name=NO04G05230.3|organism=Nannochloropsis oceanica|type=polypeptide|length=298bpback to top Synonyms
Publications
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