NO04G05100, NO04G05100 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO04G05100 vs. NCBI_GenBank
Match: EWM28933.1 (hypothetical protein Naga_100142g4 [Nannochloropsis gaditana]) HSP 1 Score: 373.6 bits (958), Expect = 5.000e-100 Identity = 183/251 (72.91%), Postives = 212/251 (84.46%), Query Frame = 0 Query: 20 AFVPPSSFSRAARTRV---NVHPPKNGIPVRPVTLDPKLVPIIYDGPKAEGGEVKREVGAILEEYMLALEVGPSSVVQGERGLYIRLIGKDVEESTVEWGSILCGYGEGSMQPLPGAGDKSVLFSLPTAESAVFYNKELVPIFEVLASLPDGTGLQGHDVSIGHKGLMQVKPVPDFTGDKYFVPKNGLPNKAAFIGLFANDLAIGGPNPPISKDEYEDASDMGNIAALVWRVVYDQDKKMVVPSRPVVTFG 268 A +P ++F + R R N+H K GI P+ +DPK+VP+IYDGPKAEGGEVKREVGAILEEYMLALEVGPS+++ ERGLYIRLIGKDVEE+TVEWGSILCGYGEGSM+P PG GDKSVLFSLP+AE+AVFYNKELVPIFEVLA LPDGTGLQGH V++G +G ++V P+ D YFVPK GLP KAAFIGLFANDLAIGGP+ P +K+EYE+ASD NIAALVWRVVYD++K MV+PSRPVVTFG Sbjct: 42 ALIPGNAFFLSHRMRKVSWNLHVAKTGISAMPLKVDPKVVPVIYDGPKAEGGEVKREVGAILEEYMLALEVGPSTLLPDERGLYIRLIGKDVEEATVEWGSILCGYGEGSMEPSPGEGDKSVLFSLPSAEAAVFYNKELVPIFEVLADLPDGTGLQGHSVTVGARGAIEVAPLTD--EKSYFVPKAGLPAKAAFIGLFANDLAIGGPSAPATKEEYEEASDQKNIAALVWRVVYDKEKGMVLPSRPVVTFG 290
BLAST of NO04G05100 vs. NCBI_GenBank
Match: XP_005854025.1 (hypothetical protein NGA_0442400 [Nannochloropsis gaditana CCMP526] >EKU22335.1 hypothetical protein NGA_0442400 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 303.1 bits (775), Expect = 8.400e-79 Identity = 152/209 (72.73%), Postives = 168/209 (80.38%), Query Frame = 0 Query: 36 NVHPPKNGIPVRPVTLDPKLVPIIYDGPKAEGGEVKREVGAILEEYMLALEVGPSSVVQGERGLYIRLIGKDVEESTVEWGSILCGYGEGSMQPLPGAGDKSVLFSLPTAESAVFYNKELVPIFEVLASLPDGTGLQGHDVSIGHKGLMQVKPVPDFTGDKYFVPKNGLPNKAAFIGLFANDLAIGGPNPPISKDEYEDASDMGNIAAL 245 N+H K GI P+ +DPK+VP+IYDGPKAEGGEVKREVGAILEEYMLALEVGPS+++ ERGLYIRLIGKDVEE+TVEWGSILCGYGEGSM+P PG GDKSVLFSLP+AE+AVFYNKELVPIFEVLA LPDGTGLQG YFVPK GLP KAAFIGLFANDLAIGGP+ P +K+EYE+ASD NIAAL Sbjct: 7 NLHVAKTGISAMPLKVDPKVVPVIYDGPKAEGGEVKREVGAILEEYMLALEVGPSTLLPDERGLYIRLIGKDVEEATVEWGSILCGYGEGSMEPSPGEGDKSVLFSLPSAEAAVFYNKELVPIFEVLADLPDGTGLQG-----------------------YFVPKAGLPAKAAFIGLFANDLAIGGPSAPATKEEYEEASDQKNIAAL 192
BLAST of NO04G05100 vs. NCBI_GenBank
Match: KOO24509.1 (hypothetical protein Ctob_002764 [Chrysochromulina sp. CCMP291]) HSP 1 Score: 92.4 bits (228), Expect = 2.200e-15 Identity = 75/220 (34.09%), Postives = 109/220 (49.55%), Query Frame = 0 Query: 57 PIIYDGPKAEGGEVKREVGAILE--EYMLALEVGPSSVVQGE----RGLYIRLIGKDVEESTVEWGSILCGYGEGSMQPLPG-AGDKSVLFSLPTAESAVFYNKELVPIFEVLASLPDGTGLQGHD-VSIGHKGLMQ-VKPVPDFTGDKYFVPKNGLPNKAAF-IGLFANDLAIGGPNPPISKDEYEDASDMGNIAALVWRVVYDQDKKMVV-PSRPVVT 266 P Y GP GE R V +E E L LEV S G+ GL++RL + VE T+ G +CGY G M P G K+V F L TA ++ F+ +EL + +LA+ D + GH V H G +Q ++ P++ G +YFVP + IG F+NDLA+ G + + D Y S N+ LV R+ + ++ + P+RPV T Sbjct: 85 PPPYQGPTPAPGETLRGVVCSIELPEVGLILEVAESLASGGDGQAGLGLFVRL-AEGVESVTLNEGVAMCGYAHGQMMASPDELGGKTVGFWLKTALTSFFFERELHTVASLLATGADVEAIAGHTIVRDAHTGEVQAIEADPEWAGARYFVPHTDQGALSIMNIGQFSNDLAMPGASVN-AADGYGTDSSERNLLVLVQRMERNPERPSELRPTRPVST 302
BLAST of NO04G05100 vs. NCBI_GenBank
Match: XP_005782536.1 (hypothetical protein EMIHUDRAFT_203578 [Emiliania huxleyi CCMP1516] >EOD30107.1 hypothetical protein EMIHUDRAFT_203578 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 72.0 bits (175), Expect = 3.100e-9 Identity = 59/190 (31.05%), Postives = 95/190 (50.00%), Query Frame = 0 Query: 61 DGPKAEGGEVKREVGAILEEYMLAL-EVGPSSVVQ-------------GERGLYIRL----IGKDVEESTVEWGSILCGYGEGSMQ-PLPGAGDKSVLFSLPTAESAVFYNKELVPIFEVLASLPDGTGLQGHDVSIGHKGLMQ-VKPVPDFTGDKYFVPKNGLPNKAAF-IGLFANDLAI-GGPNPPIS 229 +G +EGGEV V +E + AL + G + +VQ G +GL + +G V+ T+ G CGY G M+ G K+V F+L +A+++VF+ ++L + ++LA + GH+V G +Q + P PD+ G +YFVP + + IG +NDLAI P+ P+S Sbjct: 52 EGDLSEGGEVGASV--CDQEVLSALADGGEAQLVQAAPPVYDGPTPAKGLQGLVCSVELPEVGLGVDSVTLPAGVAFCGYAAGGMEMAADSEGGKTVGFALRSADTSVFFEQQLWSVADLLAPGSGVRHIAGHEVERDAGGRVQAISPDPDWGGARYFVPSREQGDLSIMNIGQMSNDLAIVARPSRPVS 239
BLAST of NO04G05100 vs. NCBI_GenBank
Match: XP_005768595.1 (hypothetical protein EMIHUDRAFT_459195 [Emiliania huxleyi CCMP1516] >EOD16166.1 hypothetical protein EMIHUDRAFT_459195 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 69.3 bits (168), Expect = 2.000e-8 Identity = 43/129 (33.33%), Postives = 70/129 (54.26%), Query Frame = 0 Query: 104 IGKDVEESTVEWGSILCGYGEGSMQ-PLPGAGDKSVLFSLPTAESAVFYNKELVPIFEVLASLPDGTGLQGHDVSIGHKGLMQ-VKPVPDFTGDKYFVPKNGLPNKAAF-IGLFANDLAI-GGPNPPIS 229 +G V+ T+ G CGY G M+ G K+V F+L +A+++VF+ ++L + ++LA + GH+V G +Q + P PD+ G +YFVP + + IG +NDLAI P+ P+S Sbjct: 134 VGLGVDSVTLPAGVAFCGYAAGGMEMAADSEGGKTVGFALRSADTSVFFEQQLWSVADLLAPGSGVRHIAGHEVERDAGGRVQAISPDPDWGGARYFVPSREQGDLSIMNIGQMSNDLAIVARPSRPVS 262
BLAST of NO04G05100 vs. NCBI_GenBank
Match: XP_005761029.1 (hypothetical protein EMIHUDRAFT_453047 [Emiliania huxleyi CCMP1516] >EOD08600.1 hypothetical protein EMIHUDRAFT_453047 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 68.2 bits (165), Expect = 4.500e-8 Identity = 61/196 (31.12%), Postives = 84/196 (42.86%), Query Frame = 0 Query: 83 LALEVGPSSVVQGERGLYIRLIGKDVEESTVEWGSILCGYGEGSMQPLPGAGDKSVLFSLPTAESAVFYNKELVPIFEVLASLPDGTGLQGHDVSIGHKGLMQVKPVPDFTGDKYFVPKNGLPNKAAF----IGLFANDLAI--GGPNPPISKDEYEDASDMGNIAALVW--------RVVYDQDKKMVVPSRPVV 265 + L V S + +GL++ L + +T+ G +LCGY + S GDK+V F+ A+ V E P +A + L GH V G V VPD + VP+ G P + +G FANDLA G + EYE AS N +LVW R D M+VPSR V+ Sbjct: 39 VTLAVQDSRLPGAGQGLFVSL-ADGADSATISSGEVLCGYCDESTLVDEATGDKAVPFAFGDAQKLVLLAGE-PPHTRAIAG-SGASSLHGHAVRRYGPGDAGVSVVPDSLTQRILVPRPGAPPASELGRGSLGQFANDLAFERGLLGRRHAALEYETASAASNSLSLVWELTLLPPRRGXXDAAGGMLVPSRVVL 231
BLAST of NO04G05100 vs. NCBI_GenBank
Match: XP_005790207.1 (hypothetical protein EMIHUDRAFT_454777 [Emiliania huxleyi CCMP1516] >EOD37778.1 hypothetical protein EMIHUDRAFT_454777 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 68.2 bits (165), Expect = 4.500e-8 Identity = 61/196 (31.12%), Postives = 84/196 (42.86%), Query Frame = 0 Query: 83 LALEVGPSSVVQGERGLYIRLIGKDVEESTVEWGSILCGYGEGSMQPLPGAGDKSVLFSLPTAESAVFYNKELVPIFEVLASLPDGTGLQGHDVSIGHKGLMQVKPVPDFTGDKYFVPKNGLPNKAAF----IGLFANDLAI--GGPNPPISKDEYEDASDMGNIAALVW--------RVVYDQDKKMVVPSRPVV 265 + L V S + +GL++ L + +T+ G +LCGY + S GDK+V F+ A+ V E P +A + L GH V G V VPD + VP+ G P + +G FANDLA G + EYE AS N +LVW R D M+VPSR V+ Sbjct: 39 VTLAVQDSRLPGAGQGLFVSL-ADGADSATISSGEVLCGYCDESTLVDEATGDKAVPFAFGDAQKLVLLAGE-PPHTRAIAG-SGASSLHGHAVRRYGPGDAGVSVVPDSLTQRILVPRPGAPPASELGRGSLGQFANDLAFERGLLGRRHAALEYETASAASNSLSLVWELTLLPPRRGXXDAAGGMLVPSRVVL 231
BLAST of NO04G05100 vs. NCBI_GenBank
Match: OEU06522.1 (hypothetical protein FRACYDRAFT_265870 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 65.9 bits (159), Expect = 2.200e-7 Identity = 67/249 (26.91%), Postives = 101/249 (40.56%), Query Frame = 0 Query: 60 YDGPKAEGGEVKREVGAILEEYMLALEVGPSSVVQGERGLYIRLIGKDVEESTVEW-----------------GSILCGYGEGSMQPLPGAGDKSVLFSLPTAES----AVFYNKELVPIFEVLASL------------------PDGTGLQGHDVSI-GHKGLMQVKPVPDFTGDKYFVPKNGLPNKAAF----IGLFANDLAIGGPNPPISKDEYEDASDMGNIAALVWRVVYDQDKKMVVPSRPVV 265 Y GP G E G +EE L + GPS V G RGL++ + G+ +CGY G GDKSV F S AVFYN+ L+ + + + S+ GH V + G +++K +F + F+P P ++ F +G++ANDLA +P ++ +Y S+ NI LVWR+ D+ +VP+ PVV Sbjct: 58 YVGP--VGNIADMEGGIAVEELALNVLTGPSLVASGGRGLFLCIYDXXXXXXXXXXXXXXXXXXXXXXXXXPQGTPICGYARGYFTD-QQEGDKSVGFLFNKENSANVTAVFYNQTLMTLGDAVWSVYNEEWRARAXXXXXXXXXXXXXXXFGHTVKVNAETGDIEIKADQEF-HSRIFIPDT--PEESQFAATSLGVYANDLAY---DPNSNETQYFINSEKNNILELVWRLAKDEITGTLVPTWPVV 297 The following BLAST results are available for this feature:
BLAST of NO04G05100 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 8
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO04G05100 ID=NO04G05100|Name=NO04G05100|organism=Nannochloropsis oceanica|type=gene|length=2393bpback to top protein sequence of NO04G05100.1 >NO04G05100.1-protein ID=NO04G05100.1-protein|Name=NO04G05100.1|organism=Nannochloropsis oceanica|type=polypeptide|length=298bpback to top protein sequence of NO04G05100.2 >NO04G05100.2-protein ID=NO04G05100.2-protein|Name=NO04G05100.2|organism=Nannochloropsis oceanica|type=polypeptide|length=268bpback to top Synonyms
Publications
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