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Properties
| Property Name | Value |
|---|
| Description | WW domain protein |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| chr4 | genome | chr4:1410517..1413611 - |
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR001202 | WW_dom |
Homology
BLAST of NO04G05070 vs. NCBI_GenBank
Match: XP_001023987.2 (WW domain protein [Tetrahymena thermophila SB210] >EAS03742.2 WW domain protein (macronuclear) [Tetrahymena thermophila SB210]) HSP 1 Score: 66.6 bits (161), Expect = 3.500e-7 Identity = 32/73 (43.84%), Postives = 42/73 (57.53%), Query Frame = 0
Query: 1 MDTEKDKDLLWIAGQGYTAPLPKACGIFHMETEELGKTEGLRPYYLNLETGKSQWDDPIDTQMRKLYKTERQE 74
MD E +K+LLWIA G APLP+ + EE+ YY N +TG+S+WD P D Q RKLY E+ +
Sbjct: 38 MDLENEKELLWIARNGLKAPLPQGWKPCQTQDEEI--------YYFNFDTGESRWDHPCDEQFRKLYLEEKNK 102
The following BLAST results are available for this feature:
Relationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO04G05070 ID=NO04G05070|Name=NO04G05070|organism=Nannochloropsis oceanica|type=gene|length=3095bp
GCGAAGGCTTGCGCACGTTGCCTTTGCTTCCGTTGCCCACGCCAACGGAA
AATTATCGGCGAAGACCCCACCCCTAGGTGCCCAGCATGTAACCATGACA
TGACAAACTTGCTTATACGATCATAAATGTCATACCAGTGCCAATCCGGC
AAAATGTTTACCATCTCCTCTGTCCGTTTTCACAATGGGCGAGCGGCGGC
CCATCTTCTCCACCAGGAAAACTAAAAGTTTGCCAGGCCTTGCCCCGCTG
CCCCGATCGCTGCCTCTAACCCCAACACGACACCCCAACGTCATGCATCC
TACAAGACTTTTGAAGGCTTTTTGAGTCTGTCTCATCTCGATTCTCGCCG
GTGCCACACGCCTCACGGCTTCGACACTGTTGCCCTCCTATACCTTGCCC
AAAGTCCTCTCTGCTGCTGCCGCCCCCCGTCGTCGCCTGGAGAACAAGGC
TGAGGAAATCCTGTCATTACGAACCGGTGTCCTCGAGGCAGAGACAGGCA
TCCGAGCCAACCTTGGACGACATTTGCAACCAAGGCCGGTTGCCAGGCAT
GGACACGGAGAAGGACAAGGATCTGTTGTGGATTGCAGGGCAAGGCTACA
CGGCGCCTTTGCCCAAGGCGTGCGGTATTTTTCACATGGAAACGGAGGAA
TTGGGTAAAACAGAAGGATTGCGACCATATTATTTAAACCTCGAAACTGG
CAAGAGTCAATGGGACGATCCTATCGACACGCAAATGCGCAAGCTGTACA
AGACGGAGCGGCAAGAGAAGACGATGCGAGAATCGTTGGCTGCCCCGCAT
ACGACAAACAATCATGGCATTTATGCCTCATCGAAAAATCTGAAAATAAA
AAATAAGCCTTCCCAAAGAAGGAGCGTGAATGCTGCCGGCACCATCCAAT
CGGCGAGGGGTCAGCCGGTCTCTCCCCGCACGACGAGGACTTTTGCTTTG
AGGGCTGCCCGTGTCAAGGCCATTCAGGAATGTGCTATGACAGCAGTGAA
GGTTGTCTCATCATCGTCACTTCAGACGCCAAGCACCAGCCTTCCTTCTT
CCTTCCCATCCTCTTCCTTCTCAAGGCGGTCCTCATTCCCTCCATCTTCG
ATCAGATCAAGCACCACAAAGAGAGCCACACCAGAAAGGAGGCAAGCAAC
GGCCATGGGAGTCAGTCCGGTATCAGCCCAGACGACGATAGGTTCTCTCA
TTTTGTCAGACTGTAGCGCCTTTGGGGAAGGAGCGGAGACGATCAAACCC
ACCACCAGCAGCTGCACCAGCCAGAGTACCAGTAATAACGGTGCAGCACC
CCCAATGAGGATTAGAGGCGATGCAGGCATCTACTGCTCTCCCTCTATGG
CAGCTCTACTAACAGACAGGCTGGATGTGGAGATAAAAGAGTTCAGGGGC
TATCGCCAGACTTTTTCAAACCACGTACGTCTGACCAACCGCACAGGAGC
CAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAAGAGGAGGA
GCAACAGCAGCAGCAGCAGCATGGTGGGCGATATTTCCTTACCTAACACG
ATCCAAAGCAAAAGGAGGGCAAGCAGACGGGAAAGGATAGTAGTAAAAGG
GGGAGCTGAAGAAGGCGAAGAAAAAGCAGCAGCAGAAGAAGAGAAAAGGG
TAAAAAAGAGCAGCAACACTTGCAGCTACTCCACCAGAGCGCAGATGCAG
GCTGAAGCAGAAGCGGCAGTTGCGCGGGCACTGCTTGAGAAAGCACGGTT
GGCCTCTGTGCGCTTGAGTAGTGAATCGACTCTTCTCGAAACACAACTGG
AAAAGCTAAGGGCACGTGGCAGCTGTCTTCAGGACGCTCTATACGTGGCA
CAGGGCCGGATAATTGAAGGCGGGAAGGAACGGATGAAAGAGGAGAAGGG
GGAGGAGGACGAAAAGGAGGTGAGAAGGTGGGACGATATGGAGCTAGTGC
GTGCCAAGGAGAGGGTGGCAGAGGGGCGGGATAAGCTCAAAAAGGATGTT
GCCATGTGCCAATCCATGCTGGCGGCCTCTATGAGGAGCTCCAGCAGCGG
CCTGATAGCTGTCTTGCCATCCTCCTCATCCTCCTCCTATCCCGTTCCTT
CCACTATCACTTCCTTTCCCTCTTTCTCCTCCCCCTTTTCTCCCTTCTCT
CCCTCCTCCCCCTTCCTATCCTCCTCTTTTTCGTCCCCTTCTTTTACTGC
TGCCGCCATTGACGCACCAGACCAGCCGTTGCAACGCCTGATAGAAGAGA
AGAAAGCCCCGTCACTTCAACTTTTCGCCGCTCAGCGCCTTAGTCGACAA
GAGCTACTGGAGCAGCAGCAGCAATGGGGCACCCCTCTCGAGGTCGACAT
GCAGCACCGCTTGGTTTCAAAAGGAAATGAAAAAAAGGCCAATCTAGACG
ACCAGAAACGGCTGCTCAAAGATAACTCCTGCTCCGATGCTCAACTCATG
GATTTACCCGAGGATGTGCGTGCGAAAGAAGTAGCTACACCATGCAAGGC
CGCGTTTCTGAGTTCGCCTTCAACCTCGTGGTCTCCTTCTAGTGCCTTGA
CCACAAGAACGCGACCAGCAAAAGAGGCTGCGTCCTATTCTATTTTGTCG
GCGGCGATCTCCCCTTCTACAGTCTTGGCGGCCTTGAACCGTCGGATGAA
GGATCAACAAATGTCCTTCTCCACCTCCTCCCCGTCTTCGTAATTATATT
CATCTCTTGCCTCGAAACAACGACTCAAGCAACTCGAGAAGGCATTGCTC
GAATTAAACGAAATGGAGTCAGAACTCAACGAGAACAGCCGCTTATTGAA
CCTGCCGAATAAAAATTGATGCCGAACGAAGAGGAGGCAGATGTGCCAAA
TTAGAGCGGAGGAGGGATGATGACGGTACGCAACGAAGATTATGTGAATG
GAAGGCAGGAGGAAAACGACAAAGAGAGAGAATGTGGTTGTCAAAAAGGA
TCGATGGCAAGAGTTGATCACGGCGCGGCCCCAAAAAAGGAGGGAGGTTG
TGTGAGAGTGGAGCGAGCAATAAAGATATCAAGCACGTGATAAAGAAGAT
CACAATTACATAATAAATAAATGCAAGAAATAATGTGTAAATGCC back to topprotein sequence of NO04G05070.1 >NO04G05070.1-protein ID=NO04G05070.1-protein|Name=NO04G05070.1|organism=Nannochloropsis oceanica|type=polypeptide|length=715bp
MDTEKDKDLLWIAGQGYTAPLPKACGIFHMETEELGKTEGLRPYYLNLET
GKSQWDDPIDTQMRKLYKTERQEKTMRESLAAPHTTNNHGIYASSKNLKI
KNKPSQRRSVNAAGTIQSARGQPVSPRTTRTFALRAARVKAIQECAMTAV
KVVSSSSLQTPSTSLPSSFPSSSFSRRSSFPPSSIRSSTTKRATPERRQA
TAMGVSPVSAQTTIGSLILSDCSAFGEGAETIKPTTSSCTSQSTSNNGAA
PPMRIRGDAGIYCSPSMAALLTDRLDVEIKEFRGYRQTFSNHVRLTNRTG
ASSSSSSSSSSSSSKRRSNSSSSSMVGDISLPNTIQSKRRASRRERIVVK
GGAEEGEEKAAAEEEKRVKKSSNTCSYSTRAQMQAEAEAAVARALLEKAR
LASVRLSSESTLLETQLEKLRARGSCLQDALYVAQGRIIEGGKERMKEEK
GEEDEKEVRRWDDMELVRAKERVAEGRDKLKKDVAMCQSMLAASMRSSSS
GLIAVLPSSSSSSYPVPSTITSFPSFSSPFSPFSPSSPFLSSSFSSPSFT
AAAIDAPDQPLQRLIEEKKAPSLQLFAAQRLSRQELLEQQQQWGTPLEVD
MQHRLVSKGNEKKANLDDQKRLLKDNSCSDAQLMDLPEDVRAKEVATPCK
AAFLSSPSTSWSPSSALTTRTRPAKEAASYSILSAAISPSTVLAALNRRM
KDQQMSFSTSSPSS* back to top
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