NO04G04800, NO04G04800 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO04G04800 vs. NCBI_GenBank
Match: EWM28873.1 (acyl-coenzyme a thioesterase 13 [Nannochloropsis gaditana]) HSP 1 Score: 374.8 bits (961), Expect = 3.700e-100 Identity = 213/404 (52.72%), Postives = 263/404 (65.10%), Query Frame = 0 Query: 34 QDITSRKILQLMRELSHSAFSGVLLHGNKGSNDNP-HSLETLDIGPGPHVRVRLCVPPHLCD----SNALLNSGAIMAWFDEVSSWGFVSADGRHRPGVSVSLNTTVLGWVWAGSEVEIESHCKKVGDTLGFADMVLRDVATGRELATGRHVKFLKMGNTWAVAMHPWAFPLVHFLVSTLYLPVLRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIARRE--IKVDVNQLLDLQNFLIIHHPSSPSS------SSSPFCYEATASFFVAPAVCNSFGSLHGGAVAMLAERAALLLYQQAARWAGKEGETQLARARTLSVDYMSPCSKNTELLLVIKGIKSDRPPSTFVSSSWPSCMVSKLSSASSSAEKGKLFIPSSYRVWFTRKSDGRYLTQSHVLFD 425 Q+ TSR++L+L+ +S SAFSGVLL + N +++ L IGPGP VR+RL VP HLCD ++ LL++GA+ AWFDEVSSW FVSADGRHRPGVSVSLNTTVL WV G+EVEI+SHCKK+G+TLGFADM+L DVATG+ELA GRHVKFLKMG W VAMH WAFPL + + S + LP +R + R E V++N+LL L NF ++ P+ +S +S P EA+ASF V P VCNSFGSLHGGA A+LAERAAL LY QAARWAG+ + L R R+LS+DYMSPC KNTELLL+++G++ +R S + L A +G L IP SY+V FTRK DGRYLTQ HVL D Sbjct: 18 QERTSRQVLELLHAVSKSAFSGVLLRRDIEPNATELQNVKALKIGPGPQVRLRLRVPSHLCDNYNNNHRLLDAGAVTAWFDEVSSWAFVSADGRHRPGVSVSLNTTVLSWVPVGTEVEIQSHCKKIGETLGFADMMLLDVATGKELAHGRHVKFLKMGTAWTVAMHAWAFPLTYLMASAVLLPSVR----------------QRTQKSSSFPPEMAPSPDLPRTEPGSAVNINRLLALDNF-HVYEPAGAASPPLAFPASVPLTMEASASFRVIPQVCNSFGSLHGGAAAILAERAALALYHQAARWAGERSQHALPRVRSLSIDYMSPCKKNTELLLLVRGMRVERGAGEGDKHSPSRSLFPPLDVAPH--PQGNL-IPMSYQVLFTRKKDGRYLTQCHVLLD 401
BLAST of NO04G04800 vs. NCBI_GenBank
Match: XP_005853925.1 (thioesterase superfamily member 2 [Nannochloropsis gaditana CCMP526] >EKU22436.1 thioesterase superfamily member 2 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 244.2 bits (622), Expect = 7.600e-61 Identity = 119/186 (63.98%), Postives = 145/186 (77.96%), Query Frame = 0 Query: 34 QDITSRKILQLMRELSHSAFSGVLLHGNKGSNDNP-HSLETLDIGPGPHVRVRLCVPPHLCD----SNALLNSGAIMAWFDEVSSWGFVSADGRHRPGVSVSLNTTVLGWVWAGSEVEIESHCKKVGDTLGFADMVLRDVATGRELATGRHVKFLKMGNTWAVAMHPWAFPLVHFLVSTLYLPVLR 215 Q+ TSR++L+L+ +S SAFSGVLL + N +++ L IGPGP VR+RL VP HLCD ++ LL++GA+ AWFDEVSSW FVSADGRHRPGVSVSLNTTVL WV G+EVEI+SHCKK+G+TLGFADM+L DVATG+ELA GRHVKFLKMG W VAMH WAFPL + + S + LP +R Sbjct: 18 QEQTSRQVLELLHAVSKSAFSGVLLRRDIEPNATELQNVKALKIGPGPRVRLRLRVPSHLCDNYDNNHCLLDAGAVTAWFDEVSSWAFVSADGRHRPGVSVSLNTTVLSWVPVGTEVEIQSHCKKIGETLGFADMMLLDVATGKELAHGRHVKFLKMGTAWTVAMHAWAFPLTYLMASAVLLPSVR 203
BLAST of NO04G04800 vs. NCBI_GenBank
Match: EWM27338.1 (Thioesterase superfamily [Nannochloropsis gaditana]) HSP 1 Score: 89.7 bits (221), Expect = 2.400e-14 Identity = 78/278 (28.06%), Postives = 117/278 (42.09%), Query Frame = 0 Query: 88 VPPHLC---DSNALLNSGAIMAWFDEVSSWGFVSADGRHRPGVSVSLNTTVLGWVWAGSEVEIESHCKKVGDTLGFADMVLRDVATGRELATGRHVKFLKMGNT--WAVAMHPWAFPLVH-FLVSTLYLPVLRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIARREIKVDVNQLLD---LQNFLIIHHPSSPSSSSSPFCYEATASFFVAPAVCNSFGSLHGGAVAMLAERAALLLYQQAARWAGKEGETQLARARTLSVDYMSPCSKNTEL 357 + +LC + L++G I A FDE+S+ + D HRPGVSV+L+ V+ + G + +++ K+G +L F + LRD A+ + +A G+H K+L M W +A P +P+V L+ V G R D + + D L N + S AS V P CN +HGGA+A+ AE ALL AAR KE +Q RAR LS+ Y+ + +L Sbjct: 58 ITKYLCRTDEGGTYLSAGVITAIFDEISTAACILQDRTHRPGVSVALDVEVMANITPGRSLRLKTWADKIGKSLAFLRLDLRDAASDQLVAVGKHCKYLPMAGVPFWDMAFTPLLYPIVRKSLLGLTRRHVATG-----------------------------------ERVNTHDASSIFDHFPLDNLTL--ENESDKGDERQRLQATRASLHVKPRHCNGLFKMHGGALAVAAEEIALL--DVAAR--KKESTSQAPRARALSLHYLQANDRVVDL 294
BLAST of NO04G04800 vs. NCBI_GenBank
Match: KMZ72612.1 (Thioesterase family protein [Zostera marina]) HSP 1 Score: 76.3 bits (186), Expect = 2.700e-10 Identity = 36/102 (35.29%), Postives = 61/102 (59.80%), Query Frame = 0 Query: 86 LCVPPHLCDSNALLNSGAIMAWFDEVSSWGFVSADGRHRPGVSVSLNTTVLGWVWAGSEVEIESHCKKVGDTLGFADMVLRDVATGRELATGRHVKFLKMGN 188 + VPP L +S A L+ GA M+ D + S ++A PGVS+ ++ + L +AG E+EIE+ + G+++GF + +R TG+ +A GRH K+L + + Sbjct: 58 MTVPPRLLNSGAFLHGGATMSLVDLIGSAALIAAG--KPPGVSIEISASYLDAAFAGEEIEIEATVLRAGNSIGFVTVEIRQKKTGKLIAKGRHTKYLTISS 157
BLAST of NO04G04800 vs. NCBI_GenBank
Match: GAX29506.1 (hypothetical protein FisN_3Hh024 [Fistulifera solaris]) HSP 1 Score: 70.5 bits (171), Expect = 1.500e-8 Identity = 57/177 (32.20%), Postives = 84/177 (47.46%), Query Frame = 0 Query: 41 ILQLMRELSHS-AFS---GVLLHG-NKGSNDNPHSLETLDIGPGPHVRVRLCVPPHLCDSNALLNSGAIMAWFDEVSSWGFVSADGRHRPGVSVSLNTTVLGWVWAGSE-VEIESHCKKVGDTLGFADMVLRDVATGRELATGRHVKFLKMG--------NTWAVAMHPWAFPLVHF 204 +L+L+ +L S FS G H S+ + S++ D G VRV L V L + + MA D+++++ ++ DG RPGVSV +N G + + E + I + +KVG LGF +RD AT R + G H+KFL MG W V W + L HF Sbjct: 12 VLKLIHKLEPSPGFSQALGTTFHDLTSSSSASSSSIQVED--KGSTVRVELPVNSSLYIESKSITLSTYMAIMDDLTTYSLMTVDG-GRPGVSVFMNMETTGSLLSSVERLAITARTRKVGRNLGFTSAEIRDAATNRMICHGSHIKFLPMGFLADYLLQYGWPVIQ--WWYGLSHF 183
BLAST of NO04G04800 vs. NCBI_GenBank
Match: XP_003389589.1 (PREDICTED: acyl-coenzyme A thioesterase 13-like [Amphimedon queenslandica]) HSP 1 Score: 67.4 bits (163), Expect = 1.300e-7 Identity = 35/85 (41.18%), Postives = 48/85 (56.47%), Query Frame = 0 Query: 99 LNSGAIMAWFDEVSSWGFVSADGRHRPGVSVSLNTTVLGWVWAGSEVEIESHCKKVGDTLGFADMVLRDVATGRELATGRHVKFL 184 L+ G D VS+W VSA+ H PGVS LN + + G V I++ C KVG TL FA + L + TG+ +A GRH K++ Sbjct: 57 LHGGLTATIIDSVSTWAIVSAE--HPPGVSTDLNISYMRPAKIGETVIIDAECLKVGKTLAFASVSLLNKDTGKLIAQGRHTKYI 139
BLAST of NO04G04800 vs. NCBI_GenBank
Match: XP_021853154.1 (acyl-coenzyme A thioesterase 13 [Spinacia oleracea] >KNA03064.1 hypothetical protein SOVF_212720 [Spinacia oleracea]) HSP 1 Score: 67.4 bits (163), Expect = 1.300e-7 Identity = 42/119 (35.29%), Postives = 60/119 (50.42%), Query Frame = 0 Query: 69 HSLETLDIGPGPHVRVRLCVPPHLCDSNALLNSGAIMAWFDEVSSWGFVSADGRHRPGVSVSLNTTVLGWVWAGSEVEIESHCKKVGDTLGFADMVLRDVATGRELATGRHVKFLKMGN 188 H L I PG V + VPP L ++ L+ GAI + D V S + G GVSV +N + L A E+EIE +VG +L + LR A+G+ +A GRH K+L + + Sbjct: 39 HGLRVDLIEPG-RVLCSINVPPRLLNTANTLHGGAIASLVDLVGS-AVIYTVGAPSTGVSVEINVSYLDAALADEEIEIEGKALRVGKSLAVVSVELRKKASGKIVAQGRHTKYLPVSS 155
BLAST of NO04G04800 vs. NCBI_GenBank
Match: GAV78411.1 (4HBT domain-containing protein [Cephalotus follicularis]) HSP 1 Score: 67.4 bits (163), Expect = 1.300e-7 Identity = 37/100 (37.00%), Postives = 52/100 (52.00%), Query Frame = 0 Query: 88 VPPHLCDSNALLNSGAIMAWFDEVSSWGFVSADGRHRPGVSVSLNTTVLGWVWAGSEVEIESHCKKVGDTLGFADMVLRDVATGRELATGRHVKFLKMGN 188 +PP L ++ L+ GA D V S + G GVSV +N + L +A EVEIE+ +VG +G + LR ATG+ +A GRH K+L N Sbjct: 57 IPPRLLNAGNFLHGGATATLVDLVGS-AVIYTLGAPMTGVSVEINVSYLDAAYADEEVEIEAKALRVGKAVGVVSVELRKKATGKIIAQGRHTKYLAAHN 155
BLAST of NO04G04800 vs. NCBI_GenBank
Match: XP_022009113.1 (acyl-coenzyme A thioesterase 13-like [Helianthus annuus]) HSP 1 Score: 67.4 bits (163), Expect = 1.300e-7 Identity = 33/100 (33.00%), Postives = 52/100 (52.00%), Query Frame = 0 Query: 88 VPPHLCDSNALLNSGAIMAWFDEVSSWGFVSADGRHRPGVSVSLNTTVLGWVWAGSEVEIESHCKKVGDTLGFADMVLRDVATGRELATGRHVKFLKMGN 188 VPP L + + L+ GAI A D V F + + GVS+ +N + L G E+EIE+ +VG + A + R+ TG+ +A GRH K+ + + Sbjct: 54 VPPRLLNVDNSLHGGAIAALVDVVGGTAFPTINNNTNTGVSMEINVSYLDAACVGDEIEIETKALRVGKAVAVASVEFRNKKTGKVIAQGRHTKYFAVSS 153
BLAST of NO04G04800 vs. NCBI_GenBank
Match: KRT81508.1 (hypothetical protein AMK59_5515 [Oryctes borbonicus]) HSP 1 Score: 67.0 bits (162), Expect = 1.700e-7 Identity = 43/127 (33.86%), Postives = 65/127 (51.18%), Query Frame = 0 Query: 57 LLHGNKGSNDNPHSLETLDIGPGPHVRVRLCVPPHLCDSNALLNSGAIMAWFDEVSSWGFVSADGRHRPGVSVSLNTTVLGWVWAGSEVEIESHCKKVGDTLGFADMVLRDVATGRELATGRHVKFL 184 LL +KG + + H+++ L G G ++ L V + L+ G D +SS G +S + +P VSV++N L G VEI ++ KVG +L F + L++ ATG LA G H KFL Sbjct: 10 LLLNSKGFDTHCHAVKILTAGNG-SIKAELKVANEHVNILGGLHGGYTATLVDVISSLGLLSHEKGLKPSVSVNMNINYLSGAKEGDTVEIFANTLKVGKSLAFLQVELKNKATGVLLAKGSHTKFL 135 The following BLAST results are available for this feature:
BLAST of NO04G04800 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 13
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO04G04800 ID=NO04G04800|Name=NO04G04800|organism=Nannochloropsis oceanica|type=gene|length=1638bpback to top protein sequence of NO04G04800.1 >NO04G04800.1-protein ID=NO04G04800.1-protein|Name=NO04G04800.1|organism=Nannochloropsis oceanica|type=polypeptide|length=441bpback to top protein sequence of NO04G04800.2 >NO04G04800.2-protein ID=NO04G04800.2-protein|Name=NO04G04800.2|organism=Nannochloropsis oceanica|type=polypeptide|length=482bpback to top Synonyms
Publications
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