NO04G04750, NO04G04750 (gene) Nannochloropsis oceanica

Overview
NameNO04G04750
Unique NameNO04G04750
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3781
Alignment locationchr4:1289110..1292890 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr4genomechr4:1289110..1292890 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO04G04750 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL080nonsL080Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR058ncniR058Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR110ngnoR110Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO04G04750.1NO04G04750.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|579664gene_2262Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO04G04750.1NO04G04750.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO04G04750 ID=NO04G04750|Name=NO04G04750|organism=Nannochloropsis oceanica|type=gene|length=3781bp
CATGGGCCTGCGTGTCTCTGTTCTGTTTTGACGCCGGCGGGCCGTACCCG
CACGCAGACGTGGTCATATTGCGCCCGTGCTTGTTTAAAAGGGCGGTGAG
GACCGGGTGAGCTCGCCCTTGCTATGGACGTGCGTCAACACTGGGCATGC
TTACAGAATCAAAATTGTGCTCTCAAGCGCCACCAAATTAATGGGCTTGC
CGTCCTTCTTTAATCGCCTGTGGCACATGAAAGCTGCTTCCCCCTCCTGC
TGCTTCCACACTCCTCACAGAGACCCATTCCCTCCATCATACACATCCAC
AGGAAGCACTATTAAATGGCGTCCTTATACTATCACTGCTACCAGAACGA
GGACGCGGAGCTCCTGCAGCAGGGACAGGAAGCCTTGGACAGGGAGGCCA
CTCGCAGCCCCGCCACGgtatgtataagccatcagctagcatttgtatgt
caccgtcatgttccttcttctgcgtgtctacttatcacatgttggtcgca
tggttgcacctgcacgcatgaatgtatgtcctgtcgcatcgcttgcctta
ttttccagcttcttcagccatctaaatttgtgtgtcctttcgtccccacg
tcccctttttccccgcccctccttacccttcctcacagccattcccactt
aatcatgcgaatgcgtaatcctcctctctaataatagtcctctccctcct
cgtaatcactcctagaaaccatcaccagcaaactccttccgattttgtat
atttcctccccacccaccccctgttcagtcccccctcccctccctccctc
gccaccccttgcccacattattcatgtatattcatgtattaactcactcc
ccccccaataaaatccatttcttagGTGATAGAAGATGCTCCAGAAGAAG
GCCTTATCCATGGCTGCCATCAGCAGCATCATCGTGTCCACCGGAGCAGT
AGTAGCGCATGCCCTATTTTCTTTAATGCTTCCGGTTTTCCGGCGAAAGA
ATCCGGAGAAGAGCTGACACTTGCAATGAGAGGGGGAGAGATAGAGGGGT
CGGCTGGGTATCCGTTGAGCATTGACACAAGCGTAGGAGCAACGGCAGCA
ACGGCCGCACAGGAAAAGATAATTCCAAGTGGGAGGAAGAGTCCTCATGT
TTTCTCACGAGAAAACGAGGAGGAGGACGGGGATGGAAGGAGAGAAGGAA
GAGTAAAAGGGACCAAGAATACGAAGGAGAGCGAAGGGCAGGACAAGGAG
GTGGAGGAAGGAGAAAACGAGGAGCAAGGGAAGCGCGGGTCGGTATTTTA
TTCATCCACTATGATCCCAGAGGTGGGAGAGCATGAAGGACCAACGGCTC
AGCAGCAACAGCAGCAGCAGCAACAGCAACAGCAGCAGCAAGATATCTTG
TCGCTATCAGGCGGTGTAAAAGATGAAGGAGGAGAAAGAGAAGGAGACAG
GGAAGCGCAACAGCAGCTCGCTACCGGCGGGCCCGAGTCCTCCTCCTCTT
CCTCCTCTTCCTACTCCTCTTCCTCTTCCTTTTCCTTCACCACCATCACC
ACCACCACCACTGCCTCCCCTCTCTGCATTCTTCGGAAAGGAAGCAGCTA
CATGAACCCTCCTCCCTCCCTCCATCCTACAAGCACCACCACCAGCAGCA
ACACCAGCACCACCACCAGCACCACTACCAGCAGCAGCAGTAGCAACAGC
AGCAGCCGCAGCAGCAGCAGCAGCAGCAGCCGCAAGCGAAATATCCGTTT
CGCCGATGCAATGGGACAGAGTCTCGCGGCCGTTAATTATTCCGAACGGT
TGCAGTACAGCTCGGCTTCGAGGACACAACATTGGTTGGAGGGGGAGGGC
TGGATGGAAGAGGACGAAGACGATGAAGACGAGGAGGGAGATCACGGGGA
AGGGTGGGTGGCTTGCCAGGGAAATCTGAGGAGGAATGAAGGAAATCCGC
GGGTGGTGGGAGGAAGGGGGGAATGGTGGTTAATGTGGCCGAAGGAAAAG
ACGGCGGCGCAAAAGGCGATGGAGAGGAGGAGGAAGATGAAGAGGGAGAT
TTTGAGGCGGAAAGAGAAGGCGCAAAGGGAAGAGCGACAGAAGGAGAAGG
AGCTAGAAGAAAAGAAGGAGGAGAAAGGGAGGGGGGTGCAGGGAGAGAGG
GAGAAGGGGAAGTGCAGCGTGGCGGTTAAAAGTAACATGTACACAAGAGC
CAAGTTGCCACCACCACCACCACCACCAACATTAGCACCACCACCAGCAA
ACGCCACGACGAAAGGTGTTGTTACTCTAGCAGCACTGGTGGTGCCCACG
GGAGCAGGAACAAAAGGCGAAAGAGAGAAGGAAGGAGGAGAAAGAGGAAG
GATGCAGGGTGAGATGATAGCATCAACGACGACACGCACGGCGGCTGCGG
TGGTGGGTGTGGCCAAAAAGGCGAGGGACATTGGGGAAATCTTTCTGGTG
GGGGAGGAGGAGGAAGAATTGAGGAAAGGATGTTGTGTCATGTCGTGAGG
AAAAGAGAGAGAGGGGGAGAGAGGGAGAGGTCACACATACACACATCTAC
ACCCACTCACACACAAACACATTTCAATGTGAAAAAAAAAATCTCGATGA
AAAATCCACACGGGGGGTAGCGCGATTGTGATTTTCGTTCACCTCTCCTC
CCTCGATTTCCGGCTGAGACTTTCAAGGAAACTGTCGATGGGAAGTAGAA
CAAGAACAAGAGTAAGAATTAGAGCAACAAGAAGAACGATAATACAAGCA
AGAGGAGGGAAGAAAAATAGAACATGGAGGAAAGAGGCAAGGTCGCATTC
ATTTCAAAGAGAGCGAGGGAATGATAAGACAGATAGGTCAACTTTTGTGT
ATACGCAACATGTAAGGAGTGTAGTGATTACGATGTCATCGATGTCATAG
GTGTGGATAGTAAAGAGCAAGATGAAAAAGTAGTCACAAAAGAATAAAAA
AGGAGGAATCTAGACAAACAGACGCCTCGGAAGGAGAATTGCAAAGGAGG
GTGGTAAACATCGATAGTTTTATCTCTATATCGAATTTCTCGCCCAAGCC
GATGATTGTAATGCATAACAAACCCACCACAGATCCTTGAACGATGAGTG
TGTCTCTTTTCTGGCAAGCTGGTTATGTTCGATCTTCCTCGTCTCCCTCT
CTCTCACATACTACTAATCTTCACTTCCTTTCCTCCTCCTCCACCCGTCG
TCCTCGTCGTGTACGCGCCCTCTGTCTGAGCATATCTTTACTTCCTTTCC
TCCCTTCTCCCTCCTTCTCCATCCCTCTCCCCACCGCTACCGAAGCTGGC
CCTACCACCTACAACATGATCACCCTGCCCTCCTCCACTTTCTCTTCTAT
GGCCATCGGCCTCCGTGTGTTCATTTGCTATCTCGTCTCAAAACACACGG
ACCCACGGATTGAGATGATCGGATGGACGAGTGGATGGACAGATAGATGA
TTTCTCCGTCACTCTACCGCTTTACGCCTTACTACTATTATGATTAATAT
AATAATAATAATTATGATCATTTCACTCAAATTAGGAGGAGGACAACTGA
TCAAACGGAGACGAAGAAGACCACGCCTTCTTTCTTTCTTCTTCTGGAAT
CAAGAGGAGACAGTGGACGAAAAGGAGGCCCGTCTCTTTTTATAGTGCAT
ATGGATATGGTCGCCCCTGCTGCTGCTGCTCCTCCTCCTGCTGCCGCTGC
TGCTGTTGCTGTCTTCATTTCTCAGGATATTTGCTTTCTATTCTGTCTTC
TTCTTCTTCCTCCACAAATTCCTCCTCAACT
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protein sequence of NO04G04750.1

>NO04G04750.1-protein ID=NO04G04750.1-protein|Name=NO04G04750.1|organism=Nannochloropsis oceanica|type=polypeptide|length=575bp
MASLYYHCYQNEDAELLQQGQEALDREATRSPATVIEDAPEEGLIHGCHQ
QHHRVHRSSSSACPIFFNASGFPAKESGEELTLAMRGGEIEGSAGYPLSI
DTSVGATAATAAQEKIIPSGRKSPHVFSRENEEEDGDGRREGRVKGTKNT
KESEGQDKEVEEGENEEQGKRGSVFYSSTMIPEVGEHEGPTAQQQQQQQQ
QQQQQQDILSLSGGVKDEGGEREGDREAQQQLATGGPESSSSSSSSYSSS
SSFSFTTITTTTTASPLCILRKGSSYMNPPPSLHPTSTTTSSNTSTTTST
TTSSSSSNSSSRSSSSSSSRKRNIRFADAMGQSLAAVNYSERLQYSSASR
TQHWLEGEGWMEEDEDDEDEEGDHGEGWVACQGNLRRNEGNPRVVGGRGE
WWLMWPKEKTAAQKAMERRRKMKREILRRKEKAQREERQKEKELEEKKEE
KGRGVQGEREKGKCSVAVKSNMYTRAKLPPPPPPPTLAPPPANATTKGVV
TLAALVVPTGAGTKGEREKEGGERGRMQGEMIASTTTRTAAAVVGVAKKA
RDIGEIFLVGEEEEELRKGCCVMS*
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Synonyms
Publications