NO04G04710, NO04G04710 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO04G04710 vs. NCBI_GenBank
Match: XP_024455058.1 (senescence-specific cysteine protease SAG12-like [Populus trichocarpa] >PNT39735.1 hypothetical protein POPTR_004G056500v3 [Populus trichocarpa]) HSP 1 Score: 154.1 bits (388), Expect = 1.600e-33 Identity = 90/266 (33.83%), Postives = 124/266 (46.62%), Query Frame = 0 Query: 378 LPASLDYRYKDANPYGVVAVTPVKQQGTCGSCWAFSAMGVVEGQVALQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTVSLSAQQILDCSEANQGCDGGSVSNALAY-VRENGLRTLHSYPYTQKPGTCRGPNPVFAYAAGPAY--LPSCPADIILQKALYYFGPISVSVKSNCPAFMAYSSGIFTPDQDCLPKEGEVTAEACAQEVDHAMVLVGYGQEEGGKTFWVLKNSWGTTWGEGGYMKMLRGAGREEGKCGTS 641 +P S+D+R AVTPVK QGTCG CWAFS + +EG + LQ + +SLS QQ++DC+ N+GC GG + A Y +R GL + +YPY GTC A Y +P + +LQ P+SV+V+ F Y SG+F D C ++HA+ +GYG + G +W++KNSWGT+WGE GYM+M RG G EG CG + Sbjct: 124 IPTSMDWRNDG-------AVTPVKDQGTCGCCWAFSTVAAIEGIIKLQ----------------------------------TGNLISLSEQQLVDCTAGNKGCQGGHMDTAFQYIIRNGGLTSEDNYPYQGVDGTCSSEKAASTEAQITGYEDVPQNNENALLQAVAKQ--PVSVAVEGGGHDFQFYKSGVFEGD--------------CGTNLNHAVTAIGYGTDSDGTDYWLVKNSWGTSWGENGYMRMRRGIGSSEGLCGVA 332
BLAST of NO04G04710 vs. NCBI_GenBank
Match: XP_002305072.3 (zingipain-2 [Populus trichocarpa]) HSP 1 Score: 154.1 bits (388), Expect = 1.600e-33 Identity = 90/266 (33.83%), Postives = 124/266 (46.62%), Query Frame = 0 Query: 378 LPASLDYRYKDANPYGVVAVTPVKQQGTCGSCWAFSAMGVVEGQVALQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTVSLSAQQILDCSEANQGCDGGSVSNALAY-VRENGLRTLHSYPYTQKPGTCRGPNPVFAYAAGPAY--LPSCPADIILQKALYYFGPISVSVKSNCPAFMAYSSGIFTPDQDCLPKEGEVTAEACAQEVDHAMVLVGYGQEEGGKTFWVLKNSWGTTWGEGGYMKMLRGAGREEGKCGTS 641 +P S+D+R AVTPVK QGTCG CWAFS + +EG + LQ + +SLS QQ++DC+ N+GC GG + A Y +R GL + +YPY GTC A Y +P + +LQ P+SV+V+ F Y SG+F D C ++HA+ +GYG + G +W++KNSWGT+WGE GYM+M RG G EG CG + Sbjct: 124 IPTSMDWRNDG-------AVTPVKDQGTCGCCWAFSTVAAIEGIIKLQ----------------------------------TGNLISLSEQQLVDCTAGNKGCQGGHMDTAFQYIIRNGGLTSEDNYPYQGVDGTCSSEKAASTEAQITGYEDVPQNNENALLQAVAKQ--PVSVAVEGGGHDFQFYKSGVFEGD--------------CGTNLNHAVTAIGYGTDSDGTDYWLVKNSWGTSWGENGYMRMRRGIGSSEGLCGVA 332
BLAST of NO04G04710 vs. NCBI_GenBank
Match: CDP18644.1 (unnamed protein product [Coffea canephora]) HSP 1 Score: 152.9 bits (385), Expect = 3.600e-33 Identity = 96/266 (36.09%), Postives = 132/266 (49.62%), Query Frame = 0 Query: 378 LPASLDYRYKDANPYGVVAVTPVKQQGTCGSCWAFSAMGVVEGQVALQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTVSLSAQQILDC--SEANQGCDGGSVSNALAYVREN-GLRTLHSYPYTQKPGTCRGPNPVFAYAAGPAYLPSCPA--DIILQKALYYFGPISVSVKSNCPAFMAYSSGIFTPDQDCLPKEGEVTAEACAQEVDHAMVLVGYGQEEGGKTFWVLKNSWGTTWGEGGYMKMLRGAGREEGKCG 639 +PA++D+R K AVTP+K QG CGSCWAFSA+ EG L +SLS Q+I+DC + +QGC GG + +A ++ +N G+ T +YPYT GTC ++AA A PA + L KA+ P+SVS+ + AF YSSG+FT D C ++DH + VGYG+ G +W++KNSWGT+WGE GY+KM RG +EG CG Sbjct: 118 VPATVDWRTKG-------AVTPIKDQGQCGSCWAFSAIAATEGITKLS----------------------------------TGKLISLSEQEIVDCDRTSQDQGCSGGYMEDAFEFIVKNKGIATETTYPYTAADGTCSKTKEA-SHAAKIASYEKVPANSEAALLKAVAN-QPVSVSIDAGGMAFQFYSSGVFTGD--------------CGTDLDHGVTAVGYGKTSNGTKYWLVKNSWGTSWGESGYIKMKRGIAAKEGLCG 326
BLAST of NO04G04710 vs. NCBI_GenBank
Match: XP_011014388.1 (PREDICTED: senescence-specific cysteine protease SAG12-like [Populus euphratica]) HSP 1 Score: 152.9 bits (385), Expect = 3.600e-33 Identity = 89/266 (33.46%), Postives = 125/266 (46.99%), Query Frame = 0 Query: 378 LPASLDYRYKDANPYGVVAVTPVKQQGTCGSCWAFSAMGVVEGQVALQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTVSLSAQQILDCSEANQGCDGGSVSNALAY-VRENGLRTLHSYPYTQKPGTCRGPN--PVFAYAAGPAYLPSCPADIILQKALYYFGPISVSVKSNCPAFMAYSSGIFTPDQDCLPKEGEVTAEACAQEVDHAMVLVGYGQEEGGKTFWVLKNSWGTTWGEGGYMKMLRGAGREEGKCGTS 641 +P S+D+R + AVTPVK QG CGSCWAFSA+ +EG + L+ +SLS QQ++DC+ N+GC GG + A Y +R+ GL + +YPY GTC + A G +P + +LQ P+SV + F Y SG+F D C E +HA+ +G+G + G +W++KNSWGT+WGE GYM+M RG G EG CG + Sbjct: 124 IPTSMDWRNAE-------AVTPVKDQGRCGSCWAFSAVAAIEGIIKLK----------------------------------TGKLISLSEQQLVDCNAGNKGCQGGFMDTAFQYIIRKGGLTSEENYPYQGVDGTCNSEKAASIEAEITGYEDVPQNNENALLQAVAKQ--PVSVGIDGGGQDFQFYKSGVFKGD--------------CGAEQNHAVTAIGFGTDSDGTDYWLVKNSWGTSWGESGYMRMQRGIGASEGLCGVA 332
BLAST of NO04G04710 vs. NCBI_GenBank
Match: XP_008225270.1 (PREDICTED: zingipain-2-like [Prunus mume]) HSP 1 Score: 152.1 bits (383), Expect = 6.100e-33 Identity = 92/271 (33.95%), Postives = 129/271 (47.60%), Query Frame = 0 Query: 380 ASLDYRYKDANPYGVV---------AVTPVKQQGTCGSCWAFSAMGVVEGQVALQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTVSLSAQQILDC--SEANQGCDGGSVSNALAYVREN-GLRTLHSYPYTQKPGTCRGPNPVFAYAAGPAYLPSCPADIILQKALYYFGPISVSVKSNCPAFMAYSSGIFTPDQDCLPKEGEVTAEACAQEVDHAMVLVGYGQEEGGKTFWVLKNSWGTTWGEGGYMKMLRGAGREEGKCG 639 A++ +RYKD +P V AVTP+K Q CG CWAFSA+ VEG +Q +SLS QQ+LDC S N+GCDGG ++++ Y+++N G+ + +YPY GTC P G +P + +L+ P+S+ + + FM Y SG+F+P C + HA+ +VGYG E G +W+LKN WG +WGE GYMK+LR AG EG CG Sbjct: 111 ANISFRYKDLSPTDVPPSIDWREKGAVTPIKNQLRCGCCWAFSAVAAVEGINQIQ----------------------------------TGELISLSEQQLLDCTSSYGNKGCDGGFMTSSFQYIQQNGGIASEENYPYQAVEGTCNANQPA-VQITGYEKVPENSEEDLLKAVSRQ--PVSIIIDGSGAEFMNYQSGVFSPTD-------------CGTKTTHAVTVVGYGMTEDGIKYWLLKNQWGESWGENGYMKILRDAGAPEGVCG 331
BLAST of NO04G04710 vs. NCBI_GenBank
Match: CDM83196.1 (unnamed protein product [Triticum aestivum]) HSP 1 Score: 152.1 bits (383), Expect = 6.100e-33 Identity = 97/265 (36.60%), Postives = 135/265 (50.94%), Query Frame = 0 Query: 378 LPASLDYRYKDANPYGVVAVTPVKQQGTCGSCWAFSAMGVVEGQVALQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTVSLSAQQILDCSEA-NQGCDGGSVSNALAYVREN-GLRTLHSYPYTQKPGTCRG--PNPVFAYAAGPAYLPSCPADIILQKALYYFGPISVSVKSNCPAFMAYSSGIFTPDQDCLPKEGEVTAEACAQEVDHAMVLVGYGQEEGGKTFWVLKNSWGTTWGEGGYMKMLRGAGREEGKCG 639 LP S+D+R K AVT VK QG CGSCWAFS + VEG A++ VSLS Q+++DC A N GC+GG + NA YV++N GL T +YPY GTC+ +PV G +P+ ++ L KA+ P+SV++ ++ AFM YS G+FT D C ++DH + +VGYG E GK +W +KNSWG +WGE GY+++ + +G E G CG Sbjct: 138 LPRSVDWRQKG-------AVTGVKNQGKCGSCWAFSTVVSVEGINAIR----------------------------------TGKLVSLSEQELIDCDTADNDGCEGGLMDNAFEYVKKNGGLTTEAAYPYRAANGTCKAAKSSPVVVRIDGHQDVPA-NSEEALAKAVAN-QPVSVAIDASGKAFMFYSEGVFTGD--------------CGTDLDHGVAVVGYGVAEDGKAYWTVKNSWGPSWGEKGYIRVEKDSGAEGGLCG 345
BLAST of NO04G04710 vs. NCBI_GenBank
Match: XP_014292126.1 (cathepsin L1-like [Halyomorpha halys]) HSP 1 Score: 152.1 bits (383), Expect = 6.100e-33 Identity = 94/261 (36.02%), Postives = 132/261 (50.57%), Query Frame = 0 Query: 376 VILPASLDYRYKDANPYGVVAVTPVKQQGTCGSCWAFSAMGVVEGQVALQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTVSLSAQQILDCSE--ANQGCDGGSVSNALAYVREN-GLRTLHSYPYTQKPGTCRGP--NPVFAYAAGPAYLPSCPADIILQKALYYFGPISVSVKSNCPAFMAYSSGIFTPDQDCLPKEGEVTAEACAQEVDHAMVLVGYGQEEGGKTFWVLKNSWGTTWGEGGYMKMLRGAG 632 V +P S+D+R + AVTP+K QGTCG CWAFS G +E Q+ Q VSLS QQ++DCS NQGCDGG + NA Y+++N G+ + SYPY + G C+ NPV + ++ LQ+A+ GP+SV+V ++ F+ Y GIF D C P +E+DH +++VGYG EE G+ +W++KNSW T WGE GYM++ R G Sbjct: 113 VEIPESVDWREEG-------AVTPIKDQGTCGGCWAFSTTGAIEAQLFRQ----------------------------------TKKLVSLSEQQLIDCSSEYGNQGCDGGLMDNAFEYIQDNGGVASEESYPYQGEVGHCKSKKLNPVHGTSVRTHVNLPEGSERALQEAVATVGPVSVAVSASNSGFLHYGGGIFDGD-SCEP-----------EELDHGVLVVGYGSEE-GQDYWIIKNSWSTRWGEQGYMRLARNKG 319
BLAST of NO04G04710 vs. NCBI_GenBank
Match: XP_007211535.1 (ervatamin-C [Prunus persica] >ONI10647.1 hypothetical protein PRUPE_4G059600 [Prunus persica]) HSP 1 Score: 151.8 bits (382), Expect = 8.000e-33 Identity = 86/268 (32.09%), Postives = 129/268 (48.13%), Query Frame = 0 Query: 381 SLDYRYKDANPYGVV---------AVTPVKQQGTCGSCWAFSAMGVVEGQVALQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTVSLSAQQILDCSEANQGCDGGSVSNALAYVREN-GLRTLHSYPYTQKPGTCRGPNPVFAYAAGPAYLPSCPADIILQKALYYFGPISVSVKSNCPAFMAYSSGIFTPDQDCLPKEGEVTAEACAQEVDHAMVLVGYGQEEGGKTFWVLKNSWGTTWGEGGYMKMLRGAGREEGKCG 639 ++ +RY+D +P V+ AVTP+K QG CG CWAFS + VEG ++ + +SLS QQ+LDC+ N GC GGS+ Y++++ G+ +YPY + GTC P G +P+ + +L+ P+S+++ ++ F Y SG+F+ C +DHA+ +VGYG E G +W+LKN WG +WGE GYMK+LR AG +EG CG Sbjct: 112 NMSFRYEDLSPTDVLPSIDWREKGAVTPIKDQGPCGCCWAFSVVAAVEGINQIK----------------------------------TGNLISLSEQQLLDCTSGNYGCGGGSLPTTFEYIQQSEGIAREENYPYEAEQGTCNANQPA-VQITGYEQVPANSEEDLLKAV--SMQPVSIAIDASGEEFKHYRSGVFSNTD-------------CGTTLDHAVTVVGYGTTEDGTKYWLLKNQWGESWGENGYMKILRDAGPQEGLCG 329
BLAST of NO04G04710 vs. NCBI_GenBank
Match: XP_008225268.1 (PREDICTED: zingipain-2-like [Prunus mume]) HSP 1 Score: 151.8 bits (382), Expect = 8.000e-33 Identity = 92/271 (33.95%), Postives = 129/271 (47.60%), Query Frame = 0 Query: 380 ASLDYRYKDANPYGVV---------AVTPVKQQGTCGSCWAFSAMGVVEGQVALQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTVSLSAQQILDC--SEANQGCDGGSVSNALAYVREN-GLRTLHSYPYTQKPGTCRGPNPVFAYAAGPAYLPSCPADIILQKALYYFGPISVSVKSNCPAFMAYSSGIFTPDQDCLPKEGEVTAEACAQEVDHAMVLVGYGQEEGGKTFWVLKNSWGTTWGEGGYMKMLRGAGREEGKCG 639 A++ +RYKD +P V AVTP+K Q CG CWAFSA+ VEG +Q +SLS QQ+LDC S N+GCDGG ++++ Y+++N G+ T +YPY G C P G +P+ + +L+ P+S+ + + FM Y SG+F+P C + HA+ +VGYG E G +W+LKN WG +WGE GYMK+LR AG EG CG Sbjct: 111 ANISFRYKDLSPTDVPPSIDWREKGAVTPIKNQLRCGCCWAFSAVAAVEGINQIQ----------------------------------TGELISLSEQQLLDCTSSYGNKGCDGGFMTSSFQYIQQNGGIATEENYPYQGAQGICSANQPA-VQITGYEQVPANSEEDLLKAVSRQ--PVSIIIDGSGAEFMNYQSGVFSPTD-------------CGTKTTHAVTVVGYGMTEDGIKYWLLKNQWGESWGENGYMKILRDAGAPEGVCG 331
BLAST of NO04G04710 vs. NCBI_GenBank
Match: XP_008371737.1 (PREDICTED: vignain-like [Malus domestica]) HSP 1 Score: 151.8 bits (382), Expect = 8.000e-33 Identity = 92/263 (34.98%), Postives = 131/263 (49.81%), Query Frame = 0 Query: 378 LPASLDYRYKDANPYGVVAVTPVKQQGTCGSCWAFSAMGVVEGQVALQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTVSLSAQQILDCSEANQGCDGGSVSNALAYVREN-GLRTLHSYPYTQKPGTCRGPNPVFAYAAGPAYLPSCP-ADIILQKALYYFGPISVSVKSNCPAFMAYSSGIFTPDQDCLPKEGEVTAEACAQEVDHAMVLVGYGQEEGGKTFWVLKNSWGTTWGEGGYMKMLRGAGREEGKCG 639 +P S+D+R +D AVTPVK QG CG CWAFSA+ VEG ++ +SLS QQ++DC +N GC GG ++ A AY+++N G+ + +YPY GTC A A Y P ++ L KA+ P+SV++ ++ AF YS G+FT D +C E++HA+ ++GYG E G +W++KNSW WG+ GYMK+LR A EG CG Sbjct: 6 VPPSIDWREQD-------AVTPVKDQGDCGCCWAFSAVAAVEGITKIK----------------------------------TGQLISLSEQQLVDCDTSNSGCQGGDMAKAFAYIQQNGGIASEENYPYQGSDGTCDTNLANEAAAKITNYARVTPNSETDLLKAV-SVQPVSVAIAAS-QAFQLYSGGLFTDD-------------SCGTELNHAVTIIGYGTTEDGTPYWLIKNSWAERWGDNGYMKILRNADAPEGVCG 212 The following BLAST results are available for this feature:
BLAST of NO04G04710 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO04G04710 ID=NO04G04710|Name=NO04G04710|organism=Nannochloropsis oceanica|type=gene|length=2608bpback to top protein sequence of NO04G04710.1 >NO04G04710.1-protein ID=NO04G04710.1-protein|Name=NO04G04710.1|organism=Nannochloropsis oceanica|type=polypeptide|length=690bpback to top Synonyms
Publications
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