NO04G04700, NO04G04700 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO04G04700 vs. NCBI_GenBank
Match: EWM28854.1 (Derlin [Nannochloropsis gaditana]) HSP 1 Score: 364.4 bits (934), Expect = 3.800e-97 Identity = 236/334 (70.66%), Postives = 256/334 (76.65%), Query Frame = 0 Query: 1 MGALAGFINAPVTKGYCLLVVGASLLSSYTQSGPALTLDLARILRKGEIWRLLTSQLAFQEHPQTVLGTFLLYTFRHFERQMGSRKFGSFLVLSTLLATSAEAAIAAWVGPSGGGKGGRNGLVLASGPFGAMYAMFVLFYTTVPKLNPKLVGVFGVDISDKSMYYAVGAQLLLGGGWATAIPALCGLMAGMLYRRNVLGIQKVMLPGVVCRCLASMLSPVLQTGRPIPGAEXXXXXXXXXXXXXXXXXXXXPGAGGPRYQPGXXXXXXXXXXXXXXXXXXXXXXXXXXIPPPAPASEEAIEMLMGLGFERGAVVRALQAADNNVEVAANRLLAG 335 MGALAGF+NAPVTKGYCLLVVGASLLSSYT S L LD RILRKGE+WRL TSQ+AFQEHPQTVLG FLLYTFRHFERQMGSRKFGSFLVLSTLLATS E AIA W+G G G+ G GL L+ GPFG +YA+FVLFYTTVPKL+P+L+ V G D+SDKSMYYAVGAQLLLGGGW TAIPALCGL AG+LYRRNV G+Q V+LP V+CR +AS+L P+LQ RP XXX XXXXXXXXXXXXXXXXXXXXXXXXXX AI+MLMGLGFERGAVVRALQ ADNNVEVAANRLL G Sbjct: 1 MGALAGFVNAPVTKGYCLLVVGASLLSSYTHSSHTLRLDTTRILRKGELWRLFTSQIAFQEHPQTVLGVFLLYTFRHFERQMGSRKFGSFLVLSTLLATSTEMAIAGWLG--GKGRIG-EGLALSPGPFGVVYALFVLFYTTVPKLHPRLLRVCGADLSDKSMYYAVGAQLLLGGGWKTAIPALCGLFAGILYRRNVFGMQSVLLPQVLCRGVASVLEPLLQARRP----------------TMRGRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAIQMLMGLGFERGAVVRALQGADNNVEVAANRLLQG 315
BLAST of NO04G04700 vs. NCBI_GenBank
Match: XP_024383933.1 (rhomboid-like protein 18 isoform X2 [Physcomitrella patens] >XP_024383934.1 rhomboid-like protein 18 isoform X2 [Physcomitrella patens] >XP_024383935.1 rhomboid-like protein 18 isoform X2 [Physcomitrella patens] >PNR48330.1 hypothetical protein PHYPA_012806 [Physcomitrella patens]) HSP 1 Score: 154.8 bits (390), Expect = 4.600e-34 Identity = 110/329 (33.43%), Postives = 161/329 (48.94%), Query Frame = 0 Query: 5 AGFINAPVTKGYCLLVVGASLLSSYTQSGPALTLDLARILRKGEIWRLLTSQLAFQEHPQTVLGTFLLYTFRHFERQMGSRKFGSFLVLSTLLATSAEA-AIAAWVGPSGGGKGGRNGLVLASGPFGAMYAMFVLFYTTVPKLNPKLVGVFGVDISDKSMYYAVGAQLLLGGGWATAIPALCGLMAGMLYRRNVLGIQKVMLPGVVCRCLASMLSPVLQTGRPIPGAEXXXXXXXXXXXXXXXXXXXXPGAGGPRYQPGXXXXXXXXXXXXXXXXXXXXXXXXXXIPPPAPASEEAIEMLMGLGFERGAVVRALQAADNNVEVAANRLL 333 +GF NAPVTK + AS+L AL+L +I++K ++WRLL+S F + + G +L+Y FR FERQ+GS K+ F++ ST+++T+ E A+AA P+ G+ L GP+G M+A+FV F+ +P ++ + VFG SDKS Y G QLLL + IP +CGL+AG LY+ NVLGI+KV P + A + +P+L + P A G G +Q PP EE I L+ +GF+R ++AL A N++ VA N LL Sbjct: 6 SGFHNAPVTKAIVMACGLASVLVGTQGGARALSLSYQKIVQKLQLWRLLSSPCVFSSTSELLFGLYLIYFFRVFERQIGSNKYLFFVLFSTIISTTLEVIALAALQDPT-----SLTGISLTPGPYGLMFALFVPFFFDIP-ISTRF-KVFGARFSDKSFVYLAGLQLLLSSWKQSLIPGVCGLVAGFLYKSNVLGIKKVKFPEGLAAAAARLFAPLLSSNSAPPTAR----------------GGRASGQNGHAFQ----------------------HRFAASAPPLTAPPEEHIATLVAMGFDRSDAMQALAVARNDITVATNLLL 289
BLAST of NO04G04700 vs. NCBI_GenBank
Match: XP_024383932.1 (rhomboid-like protein 18 isoform X1 [Physcomitrella patens]) HSP 1 Score: 151.4 bits (381), Expect = 5.100e-33 Identity = 108/325 (33.23%), Postives = 158/325 (48.62%), Query Frame = 0 Query: 9 NAPVTKGYCLLVVGASLLSSYTQSGPALTLDLARILRKGEIWRLLTSQLAFQEHPQTVLGTFLLYTFRHFERQMGSRKFGSFLVLSTLLATSAEA-AIAAWVGPSGGGKGGRNGLVLASGPFGAMYAMFVLFYTTVPKLNPKLVGVFGVDISDKSMYYAVGAQLLLGGGWATAIPALCGLMAGMLYRRNVLGIQKVMLPGVVCRCLASMLSPVLQTGRPIPGAEXXXXXXXXXXXXXXXXXXXXPGAGGPRYQPGXXXXXXXXXXXXXXXXXXXXXXXXXXIPPPAPASEEAIEMLMGLGFERGAVVRALQAADNNVEVAANRLL 333 NAPVTK + AS+L AL+L +I++K ++WRLL+S F + + G +L+Y FR FERQ+GS K+ F++ ST+++T+ E A+AA P+ G+ L GP+G M+A+FV F+ +P ++ + VFG SDKS Y G QLLL + IP +CGL+AG LY+ NVLGI+KV P + A + +P+L + P A G G +Q PP EE I L+ +GF+R ++AL A N++ VA N LL Sbjct: 16 NAPVTKAIVMACGLASVLVGTQGGARALSLSYQKIVQKLQLWRLLSSPCVFSSTSELLFGLYLIYFFRVFERQIGSNKYLFFVLFSTIISTTLEVIALAALQDPT-----SLTGISLTPGPYGLMFALFVPFFFDIP-ISTRF-KVFGARFSDKSFVYLAGLQLLLSSWKQSLIPGVCGLVAGFLYKSNVLGIKKVKFPEGLAAAAARLFAPLLSSNSAPPTAR----------------GGRASGQNGHAFQ----------------------HRFAASAPPLTAPPEEHIATLVAMGFDRSDAMQALAVARNDITVATNLLL 295
BLAST of NO04G04700 vs. NCBI_GenBank
Match: XP_024395826.1 (rhomboid-like protein 20 [Physcomitrella patens] >PNR39424.1 hypothetical protein PHYPA_019702 [Physcomitrella patens]) HSP 1 Score: 150.2 bits (378), Expect = 1.100e-32 Identity = 107/329 (32.52%), Postives = 157/329 (47.72%), Query Frame = 0 Query: 5 AGFINAPVTKGYCLLVVGASLLSSYTQSGPALTLDLARILRKGEIWRLLTSQLAFQEHPQTVLGTFLLYTFRHFERQMGSRKFGSFLVLSTLLATSAE-AAIAAWVGPSGGGKGGRNGLVLASGPFGAMYAMFVLFYTTVPKLNPKLVGVFGVDISDKSMYYAVGAQLLLGGGWATAIPALCGLMAGMLYRRNVLGIQKVMLPGVVCRCLASMLSPVLQTGRPIPGAEXXXXXXXXXXXXXXXXXXXXPGAGGPRYQPGXXXXXXXXXXXXXXXXXXXXXXXXXXIPPPAPASEEAIEMLMGLGFERGAVVRALQAADNNVEVAANRLL 333 +GF NAPVTKG L AS+L AL+L + ++K ++WRLLTS F P+ + G +L+Y FR FERQ+GS K+ ++ ST +T E AA+A P+ G+ L GP+G ++A FV F+ +P ++ +L G SDKS Y G QLLL + +P +CGL+AG+LY+ N+LGI+KV P + + +P+L + +P R+ P PP + SE I LM +GF+R ++AL AA N+V +A N LL Sbjct: 6 SGFHNAPVTKGIVLACGLASVLIGTQGGARALSLSYQKFVQKQQLWRLLTSPWVFSSTPEVLFGLYLVYFFRVFERQIGSNKYLFYVFFSTTTSTILEVAALAVIRDPT-----ALTGIFLTPGPYGLIFASFVPFFFDIP-ISTRL-KFLGARFSDKSFVYLAGLQLLLSSWTQSLVPGVCGLLAGLLYKSNILGIRKVKFPEGLASAATRLFTPLLSSNSTLPTTVRGAAPNGRLLEH--------------RFAPS--------------------------APPVSAQSEVHITTLMAMGFDRSDALQALAAARNDVALATNLLL 287
BLAST of NO04G04700 vs. NCBI_GenBank
Match: XP_024383936.1 (rhomboid-like protein 20 isoform X3 [Physcomitrella patens]) HSP 1 Score: 143.3 bits (360), Expect = 1.400e-30 Identity = 102/311 (32.80%), Postives = 151/311 (48.55%), Query Frame = 0 Query: 23 ASLLSSYTQSGPALTLDLARILRKGEIWRLLTSQLAFQEHPQTVLGTFLLYTFRHFERQMGSRKFGSFLVLSTLLATSAEA-AIAAWVGPSGGGKGGRNGLVLASGPFGAMYAMFVLFYTTVPKLNPKLVGVFGVDISDKSMYYAVGAQLLLGGGWATAIPALCGLMAGMLYRRNVLGIQKVMLPGVVCRCLASMLSPVLQTGRPIPGAEXXXXXXXXXXXXXXXXXXXXPGAGGPRYQPGXXXXXXXXXXXXXXXXXXXXXXXXXXIPPPAPASEEAIEMLMGLGFERGAVVRALQAADNNVEVAANRLL 333 AS+L AL+L +I++K ++WRLL+S F + + G +L+Y FR FERQ+GS K+ F++ ST+++T+ E A+AA P+ G+ L GP+G M+A+FV F+ +P ++ + VFG SDKS Y G QLLL + IP +CGL+AG LY+ NVLGI+KV P + A + +P+L + P A G G +Q PP EE I L+ +GF+R ++AL A N++ VA N LL Sbjct: 6 ASVLVGTQGGARALSLSYQKIVQKLQLWRLLSSPCVFSSTSELLFGLYLIYFFRVFERQIGSNKYLFFVLFSTIISTTLEVIALAALQDPT-----SLTGISLTPGPYGLMFALFVPFFFDIP-ISTRF-KVFGARFSDKSFVYLAGLQLLLSSWKQSLIPGVCGLVAGFLYKSNVLGIKKVKFPEGLAAAAARLFAPLLSSNSAPPTAR----------------GGRASGQNGHAFQ----------------------HRFAASAPPLTAPPEEHIATLVAMGFDRSDAMQALAVARNDITVATNLLL 271
BLAST of NO04G04700 vs. NCBI_GenBank
Match: ADE77792.1 (unknown [Picea sitchensis]) HSP 1 Score: 141.0 bits (354), Expect = 6.900e-30 Identity = 99/328 (30.18%), Postives = 152/328 (46.34%), Query Frame = 0 Query: 5 AGFINAPVTKGYCLLVVGASLLSSYTQSGPALTLDLARILRKGEIWRLLTSQLAFQEHPQTVLGTFLLYTFRHFERQMGSRKFGSFLVLSTLLATSAEAAIAAWVGPSGGGKGGRNGLVLASGPFGAMYAMFVLFYTTVPKLNPKLVGVFGVDISDKSMYYAVGAQLLLGGGWATAIPALCGLMAGMLYRRNVLGIQKVMLPGVVCRCLASMLSPVLQTGRPIPGAEXXXXXXXXXXXXXXXXXXXXPGAGGPRYQPGXXXXXXXXXXXXXXXXXXXXXXXXXXIPPPAPASEEAIEMLMGLGFERGAVVRALQAADNNVEVAANRLL 333 +GF NAPVTKG + AS++++ +L I++K +WRL+TS F + + G +LLY FR FERQ+GS K+ F++ +T+ +T E I S G LA GP+G + ++FV F+ +P +F V SDKS Y G QLLL + IP CG++AG+LYR N+ IQ++ LP +V + + +P++ G + G ++Q + P SEEAI L+ +GF+R + +RAL A N++ AA+ LL Sbjct: 6 SGFQNAPVTKGLVFICGIASIIAATQGRASFSSLSYQAIVKKLHLWRLVTSVFVFSSTSELMFGLYLLYYFRVFERQIGSNKYSVFILFATIFSTLFELMILVLFKDSISGG-------LAPGPYGIIVSLFVPFFLDIPV--STRFQIFSVRFSDKSFVYLAGLQLLLSSWKRSLIPGFCGVLAGLLYRMNIFRIQRIKLPKLVASTASWLFAPLVSGGSSTISSRRTATRETIDAPL------------GQQFQ-------------------------GNLVAPTMAESEEAISALVSMGFDRSSAIRALAQARNDINAAADLLL 287
BLAST of NO04G04700 vs. NCBI_GenBank
Match: GAQ91389.1 (hypothetical protein KFL_007760080 [Klebsormidium nitens]) HSP 1 Score: 140.2 bits (352), Expect = 1.200e-29 Identity = 109/330 (33.03%), Postives = 152/330 (46.06%), Query Frame = 0 Query: 5 AGFINAPVTKGYCLLVVGASLLSSYTQSGPALTLDLARILRKGEIWRLLTSQLAFQEHPQTVLGTFLLYTFRHFERQMGSRKFGSFLVLSTLLATSAEAAIAAWVGPSGGGKGGRNGLVLASGPFGAMYAMFVLFYTTVPKLNPKLVGVFGVDISDKSMYYAVGAQLLLGGGWATAIPALCGLMAGMLYRRNVLGIQKVMLPGVVCRCLASMLSPVLQTGRPIPGAEXXXXXXXXXXXXXXXXXXXXPGAGGPRYQPGXXXXXXXXXXXXXXXXXXXXXXXXXXIPPPAPASEEAIEMLMGLGFERGAVVRALQAADNNVEVAANRLLAG 335 +GF NAPVTK L G SLL + L+L I R+ E+WRLLTS F P+ + G +L+Y FR FERQ+GS K+ F + ST+L+T+ + +A+ V G G + L L SGP+G ++A FV F+ +P V + SDKS Y G QLLL G + IP + GL+AG+ YR NV GI+++ P + + S ++ P P G G XXXX A++ L+ +GF+R VRAL A N+V +A N LL G Sbjct: 6 SGFYNAPVTKAIILTSAGLSLLGGLHGTARLLSLSYECIFRRHELWRLLTSATIFSSTPEILFGLYLVYFFRIFERQVGSNKYTIFALSSTILSTAFQ--LASLVALEGRFSG--DLLTLCSGPYGLIFASFVPFFFDIPV--SARFSVMSLKFSDKSFVYLAGLQLLLSSGRQSIIPGISGLLAGLTYRSNVFGIRRLKFPDFISSFVERTFSFLISRTPPTASGGRVAGPGAPGTGPTIARRLGGPSQGFSDQLIG--GNGGLPGGPFLAPQTGLGVAXXXXXXXXXXXXXXAVQTLVSMGFDRSQAVRALAQARNDVHMATNLLLEG 327
BLAST of NO04G04700 vs. NCBI_GenBank
Match: ADE75831.1 (unknown [Picea sitchensis]) HSP 1 Score: 139.0 bits (349), Expect = 2.600e-29 Identity = 99/328 (30.18%), Postives = 151/328 (46.04%), Query Frame = 0 Query: 5 AGFINAPVTKGYCLLVVGASLLSSYTQSGPALTLDLARILRKGEIWRLLTSQLAFQEHPQTVLGTFLLYTFRHFERQMGSRKFGSFLVLSTLLATSAEAAIAAWVGPSGGGKGGRNGLVLASGPFGAMYAMFVLFYTTVPKLNPKLVGVFGVDISDKSMYYAVGAQLLLGGGWATAIPALCGLMAGMLYRRNVLGIQKVMLPGVVCRCLASMLSPVLQTGRPIPGAEXXXXXXXXXXXXXXXXXXXXPGAGGPRYQPGXXXXXXXXXXXXXXXXXXXXXXXXXXIPPPAPASEEAIEMLMGLGFERGAVVRALQAADNNVEVAANRLL 333 +GF NAPVTKG + AS++++ +L I++K +WRL TS F + + G +LLY FR FERQ+GS K+ F++ +T+ +T E I S G LA GP+G + ++FV F+ +P +F V SDKS Y G QLLL + IP CG++AG+LYR N+ IQ++ LP +V + + +P++ G + G ++Q + P SEEAI L+ +GF+R + +RAL A N++ AA+ LL Sbjct: 6 SGFQNAPVTKGLVFICGIASIIAATQGRASFSSLSYQAIVKKLHLWRLGTSVFVFSSTSELMFGLYLLYYFRVFERQIGSNKYSVFILFATIFSTLFELMILVLFKDSISGG-------LAPGPYGIIVSLFVPFFLDIPV--STRFQIFSVRFSDKSFVYLAGLQLLLSSWKRSLIPGFCGVLAGLLYRMNIFRIQRIKLPKLVASTASWLFAPLVSGGSSTISSRRTATRETIDAPL------------GQQFQ-------------------------GNLVAPTMAESEEAISALVSMGFDRSSAIRALAQARNDINAAADLLL 287
BLAST of NO04G04700 vs. NCBI_GenBank
Match: PTQ43799.1 (hypothetical protein MARPO_0023s0107 [Marchantia polymorpha]) HSP 1 Score: 137.9 bits (346), Expect = 5.800e-29 Identity = 81/220 (36.82%), Postives = 124/220 (56.36%), Query Frame = 0 Query: 5 AGFINAPVTKGYCLLVVGASLLSSYTQSGPALTLDLARILRKGEIWRLLTSQLAFQEHPQTVLGTFLLYTFRHFERQMGSRKFGSFLVLSTLLATSAEA-AIAAWVGPSGGGKGGRNGLVLASGPFGAMYAMFVLFYTTVPKLNPKLVGVFGVDISDKSMYYAVGAQLLLGGGWATAIPALCGLMAGMLYRRNVLGIQKVMLPGVVCRCLASMLSPVLQT 224 +GF NA VTKG ++ SLL A +L I RK ++WRL+TS P+ + G +L+Y FR FERQ+GS K+ F++ ST+L T E A+AA P+ +G+ L+ GP+G ++A F+ F+ +P ++ + VFG SDKS Y G QLLL + IP +CG++AG YR NVL ++++ P + A++ P+L + Sbjct: 6 SGFQNAAVTKGVVIICGVVSLLVGTQGGARACSLSYQAIFRKLQLWRLITSNFVVSTSPELIFGLYLIYFFRVFERQLGSNKYMVFVLFSTILTTLLEVIALAAIRDPTS------SGIALSPGPYGLIFASFIPFFFDIP-ISTRF-RVFGATFSDKSFIYLAGLQLLLSSWKRSLIPGICGILAGFTYRSNVLRLRRMKFPDSLASATATLFRPLLSS 217
BLAST of NO04G04700 vs. NCBI_GenBank
Match: BAJ94565.1 (predicted protein [Hordeum vulgare subsp. vulgare]) HSP 1 Score: 136.0 bits (341), Expect = 2.200e-28 Identity = 103/331 (31.12%), Postives = 147/331 (44.41%), Query Frame = 0 Query: 2 GALAGFINAPVTKGYCLLVVGASLLSSYTQSGPALTLDLARILRKGEIWRLLTSQLAFQEHPQTVLGTFLLYTFRHFERQMGSRKFGSFLVLSTLLATSAEAAIAAWVGPSGGGKGGRNGLVLASGPFGAMYAMFVLFYTTVPKLNPKLVGVFGVDISDKSMYYAVGAQLLLGGGWATAIPALCGLMAGMLYRRNVLGIQKVMLPGVVCRCLASMLSPVLQTGRPIPGAEXXXXXXXXXXXXXXXXXXXXPGAGGPRYQPGXXXXXXXXXXXXXXXXXXXXXXXXXXIPPPAPASEEAIEMLMGLGFERGAVVRALQAADNNVEVAANRLL 333 G ++GF NAPVT+ L S++ S + AL L I++ +WR+ S AFQ P+ + G +LLY FR FERQMGS K+ F + + ++ E + K LASGP+G ++A F+ F+ +P + +FGV+ SDKS Y G QLL+ + IP +CGL+AG LYR NVLGI++ LP +V A +P P A R P + PP E +I ML+ +GF+ A +AL A N++ VA N LL Sbjct: 4 GGVSGFHNAPVTRAIVLASGLLSVVFSVNRRARALGLSYQDIIKNFRVWRIFGSVFAFQSTPELMFGLYLLYYFRVFERQMGSNKYSVFSLFAIAVSLPLEILSLVLL------KDTNYITALASGPYGLIFASFIPFFLDIPITS--RFRIFGVNFSDKSFIYLAGLQLLVSSWKRSLIPGICGLIAGSLYRLNVLGIRRRKLPQIVASFFARFFAP--------------------------------PSASSSR--PSRSLVGNVPSHTGRAVQNQPSTGFAPVVEPP----ESSIAMLVSMGFDSNAARQALMRARNDINVATNILL 288 The following BLAST results are available for this feature:
BLAST of NO04G04700 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO04G04700 ID=NO04G04700|Name=NO04G04700|organism=Nannochloropsis oceanica|type=gene|length=1194bpback to top protein sequence of NO04G04700.1 >NO04G04700.1-protein ID=NO04G04700.1-protein|Name=NO04G04700.1|organism=Nannochloropsis oceanica|type=polypeptide|length=336bpback to top Synonyms
Publications
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