NO04G04680, NO04G04680 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO04G04680 vs. NCBI_GenBank
Match: EWM28859.1 (nadh ubiquinone oxidoreductase b22-like subunit [Nannochloropsis gaditana]) HSP 1 Score: 275.0 bits (702), Expect = 1.400e-70 Identity = 134/152 (88.16%), Postives = 145/152 (95.39%), Query Frame = 0 Query: 1 MANASMRAAAAQYINPAVKLSHKTTVIRLYRKSLKTLNSWAIDREVFLSEANKIRSEFSSNAHLAPESGKVKALVREAQEKLLTHSHPDKYILPWMPGGTLFMRNPPLPFDVVFAGHVPEELHEEPINIDMTPVVKGEKGDGRVLVDSANKA 153 MANASMRAAAAQYINPA +LSHKT V+RLYRKSLKTLNSWAIDREVFLSEA K+R+ FS+NAHLAPESGKVKALVR+A E+LL +SHPDKYILPWMPGGTLFMRNPPLPFDVVFAGHVPE++ EEP+NIDMTPVVKGEKGDGRVLVDSANKA Sbjct: 1 MANASMRAAAAQYINPAPQLSHKTIVVRLYRKSLKTLNSWAIDREVFLSEAGKLRASFSANAHLAPESGKVKALVRKAHEELLRYSHPDKYILPWMPGGTLFMRNPPLPFDVVFAGHVPEDVKEEPLNIDMTPVVKGEKGDGRVLVDSANKA 152
BLAST of NO04G04680 vs. NCBI_GenBank
Match: GAY05335.1 (Hypothetical protein PINS_013139 [Pythium insidiosum] >GAY00874.1 Hypothetical protein PINS_008729 [Pythium insidiosum]) HSP 1 Score: 153.3 bits (386), Expect = 6.200e-34 Identity = 82/151 (54.30%), Postives = 104/151 (68.87%), Query Frame = 0 Query: 7 RAAAAQYINPAVKLSHKTTVIRLYRKSLKTLNSWAIDREVFLSEANKIRSEFSSNAHLAPESGKVKALVREAQEKLLTHSHPDKYILPWMPGGTLFMRNPPLPFDVVFA-GHVPEELHEEP---INIDMTPVVKGEKGDGRVLVDSANKAY 154 R A+ NP KLSHK TV RLY++SLKTL+SW IDR ++ EA KIR++F S+ L P SG VK LVREA+EKL ++HPD+Y+ +MPGGT FMRNPP+P DV F G++PE++ P INIDMTP + KG V VD + K Y Sbjct: 12 REVVARVANPVEKLSHKQTVTRLYKQSLKTLDSWVIDRRLWNEEATKIRAQFDSHKALDPNSGLVKRLVREAEEKLEKYTHPDRYVFNYMPGGTRFMRNPPIPLDVCFPDGNIPEDVEVSPLEAINIDMTP-LPARKG---VFVDFSKKGY 158
BLAST of NO04G04680 vs. NCBI_GenBank
Match: XP_024577352.1 (NADH:ubiquinone oxidoreductase, NDUFB9/B22 subunit [Plasmopara halstedii] >CEG40983.1 NADH:ubiquinone oxidoreductase, NDUFB9/B22 subunit [Plasmopara halstedii]) HSP 1 Score: 147.5 bits (371), Expect = 3.400e-32 Identity = 78/155 (50.32%), Postives = 104/155 (67.10%), Query Frame = 0 Query: 3 NASMRAAAAQYINPAVKLSHKTTVIRLYRKSLKTLNSWAIDREVFLSEANKIRSEFSSNAHLAPESGKVKALVREAQEKLLTHSHPDKYILPWMPGGTLFMRNPPLPFDVVFA-GHVPEELHEEP---INIDMTPVVKGEKGDGRVLVDSANKAY 154 N + R +++N +LSHK TV RLY+KSLKTL+SW IDR ++ EA KIR+EF +N L P+SG K LVREAQEK+ ++HPD+YI +MPGG+L+MRN P+P DV F G +P+++ P INIDMTP+ E V VD + K Y Sbjct: 11 NQTFREVVGRFVNAPPQLSHKQTVQRLYKKSLKTLDSWIIDRRLWNEEATKIRAEFDANKKLDPQSGLAKRLVREAQEKVDHYTHPDRYIFNYMPGGSLYMRNAPIPLDVCFPDGIIPDDVEVSPLEGINIDMTPLPAKE----TVFVDFSKKGY 161
BLAST of NO04G04680 vs. NCBI_GenBank
Match: XP_002903122.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY55546.1 conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 146.4 bits (368), Expect = 7.600e-32 Identity = 77/155 (49.68%), Postives = 103/155 (66.45%), Query Frame = 0 Query: 3 NASMRAAAAQYINPAVKLSHKTTVIRLYRKSLKTLNSWAIDREVFLSEANKIRSEFSSNAHLAPESGKVKALVREAQEKLLTHSHPDKYILPWMPGGTLFMRNPPLPFDVVFA-GHVPEELHEEP---INIDMTPVVKGEKGDGRVLVDSANKAY 154 N + R +++ +LSHK V R+Y+KSLKTL+SW IDR ++ EA KIR+EF +N+ L PESG K LVREAQEK+ ++HPD+YI +MPGG+LFMRN P+P DV F G++PE++ P INIDMTP+ V VD + K Y Sbjct: 11 NKTFREVVGRFVGAPPQLSHKQKVQRVYKKSLKTLDSWVIDRRLWNEEATKIRAEFDANSKLDPESGLAKRLVREAQEKVDHYTHPDRYIFNYMPGGSLFMRNAPIPLDVCFPDGNIPEDVELSPLEGINIDMTPL----PAKDTVFVDFSKKGY 161
BLAST of NO04G04680 vs. NCBI_GenBank
Match: XP_008911262.1 (hypothetical protein PPTG_15717 [Phytophthora parasitica INRA-310] >ETI37986.1 hypothetical protein F443_16169 [Phytophthora parasitica P1569] >ETK78181.1 hypothetical protein L915_15725 [Phytophthora parasitica] >ETL31622.1 hypothetical protein L916_15616 [Phytophthora parasitica] >ETL84863.1 hypothetical protein L917_15436 [Phytophthora parasitica] >ETM38020.1 hypothetical protein L914_15573 [Phytophthora parasitica] >ETN03489.1 hypothetical protein PPTG_15717 [Phytophthora parasitica INRA-310] >ETO66765.1 hypothetical protein F444_16152 [Phytophthora parasitica P1976] >ETP07868.1 hypothetical protein F441_15997 [Phytophthora parasitica CJ01A1] >ETP35903.1 hypothetical protein F442_16020 [Phytophthora parasitica P10297] >KUF79103.1 NADH dehydrogenase 1 beta subcomplex subunit 9 [Phytophthora nicotianae]) HSP 1 Score: 146.0 bits (367), Expect = 9.900e-32 Identity = 77/155 (49.68%), Postives = 103/155 (66.45%), Query Frame = 0 Query: 3 NASMRAAAAQYINPAVKLSHKTTVIRLYRKSLKTLNSWAIDREVFLSEANKIRSEFSSNAHLAPESGKVKALVREAQEKLLTHSHPDKYILPWMPGGTLFMRNPPLPFDVVFA-GHVPEELHEEP---INIDMTPVVKGEKGDGRVLVDSANKAY 154 N + R +++ +LSHK V RLY++SLKTL+SW IDR ++ EA KIR+EF +N+ L PESG K LVREAQEK+ ++HPD+YI +MPGG+LFMRN P+P DV F G++PE++ P INIDMTP+ V VD + K Y Sbjct: 11 NKTFREVVGRFVGAPPQLSHKQKVQRLYKQSLKTLDSWVIDRRLWNEEATKIRAEFDANSKLDPESGLAKRLVREAQEKVDHYTHPDRYIFNYMPGGSLFMRNAPIPLDVCFPDGNIPEDVELSPLEGINIDMTPL----PAKDTVFVDFSKKGY 161
BLAST of NO04G04680 vs. NCBI_GenBank
Match: XP_009530932.1 (hypothetical protein PHYSODRAFT_562177 [Phytophthora sojae] >EGZ13503.1 hypothetical protein PHYSODRAFT_562177 [Phytophthora sojae]) HSP 1 Score: 145.2 bits (365), Expect = 1.700e-31 Identity = 76/155 (49.03%), Postives = 103/155 (66.45%), Query Frame = 0 Query: 3 NASMRAAAAQYINPAVKLSHKTTVIRLYRKSLKTLNSWAIDREVFLSEANKIRSEFSSNAHLAPESGKVKALVREAQEKLLTHSHPDKYILPWMPGGTLFMRNPPLPFDVVFA-GHVPEELHEEP---INIDMTPVVKGEKGDGRVLVDSANKAY 154 N + R +++ A +LSHK V RLY++SLKTL+SW IDR ++ EA KIR++F +N L PESG K LVREAQEK+ ++HPD+YI +MPGG+LFMRN P+P DV F G++P+++ P INIDMTP+ V VD + K Y Sbjct: 11 NKTFREVVGRFVGAAPQLSHKQKVQRLYKQSLKTLDSWVIDRRLWNEEATKIRAQFDANRELDPESGLAKRLVREAQEKVDHYTHPDRYIFNYMPGGSLFMRNAPIPLDVCFPDGNIPDDVELSPLEGINIDMTPL----PAKDTVFVDFSKKGY 161
BLAST of NO04G04680 vs. NCBI_GenBank
Match: OWZ12573.1 (Nadh ubiquinone oxidoreductase [Phytophthora megakarya]) HSP 1 Score: 142.9 bits (359), Expect = 8.400e-31 Identity = 75/155 (48.39%), Postives = 103/155 (66.45%), Query Frame = 0 Query: 3 NASMRAAAAQYINPAVKLSHKTTVIRLYRKSLKTLNSWAIDREVFLSEANKIRSEFSSNAHLAPESGKVKALVREAQEKLLTHSHPDKYILPWMPGGTLFMRNPPLPFDVVFA-GHVPEELHEEP---INIDMTPVVKGEKGDGRVLVDSANKAY 154 N ++R +++ +LSHK V RLY+ SLKTL+SW IDR ++ EA KIR+EF +N+ L PESG K LVREAQ+K+ ++HPD+YI +MPGG+L+MRN P+P DV F G +P+++ P INIDMTP+ E V VD + K Y Sbjct: 11 NKTLREVVGRFVGAPQQLSHKQKVQRLYKMSLKTLDSWVIDRRLWNEEATKIRAEFDANSALDPESGLAKRLVREAQDKVDHYTHPDRYIFNYMPGGSLYMRNAPIPLDVCFPDGEIPDDVELSPLEAINIDMTPLPAKE----TVFVDFSKKGY 161
BLAST of NO04G04680 vs. NCBI_GenBank
Match: CCA22391.1 (conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 140.6 bits (353), Expect = 4.100e-30 Identity = 71/155 (45.81%), Postives = 99/155 (63.87%), Query Frame = 0 Query: 3 NASMRAAAAQYINPAVKLSHKTTVIRLYRKSLKTLNSWAIDREVFLSEANKIRSEFSSNAHLAPESGKVKALVREAQEKLLTHSHPDKYILPWMPGGTLFMRNPPLPFDVVFAGHVPEELHEEP---INIDMTPVVKGEKGDGRVLVDSANKAYF 155 N ++R A ++ P L+H V RLY++SLKTL SW IDR ++ EA K+R++F +N HLAPES + K ++EA EKL ++HPD+Y+ +MPGGT FMRN PLP +V F VPE++ P +NID TP+ E V VD + K+ F Sbjct: 2 NQTLREVVAHFVAPPKNLTHTQVVQRLYKQSLKTLESWVIDRRLWNEEAVKVRAQFDANRHLAPESDQAKFAIKEANEKLKKYTHPDRYVFNYMPGGTKFMRNAPLPLEVCFPNGVPEDVEVSPVEAVNIDGTPLPPKE----TVFVDFSKKSSF 152
BLAST of NO04G04680 vs. NCBI_GenBank
Match: CBN75611.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 128.3 bits (321), Expect = 2.100e-26 Identity = 67/159 (42.14%), Postives = 97/159 (61.01%), Query Frame = 0 Query: 3 NASMRAAAAQYINPAVKLSHKTTVIRLYRKSLKTLNSWAIDREVFLSEANKIRSEFSSNAHLAPESGKVKALVREAQEKLLTHSHPDKYILPWMPGGTLFMRNPPLPFDVVFAGHVPEELHEE------PINIDMTPVVKGEKGD-GRVLVDSANKAYF 155 N++ R AAAQ+I+ ++HK V RLYR SLK L+SWAIDR +FL EA K+R+ F + P+S + KAL+R A + + H H D+YI P+MP G+ FMRNPP P + + +P+E+ E + +DM+ +G G+VLVD A K + Sbjct: 6 NSTFRGAAAQFISKQHPITHKQEVCRLYRASLKLLDSWAIDRTIFLEEATKVRASFDEGSKCGPDSARAKALMRGAYKMIDEHVHVDRYIRPYMPSGSSFMRNPPPPLEACYPLGIPDEVLAEFKGVPMEVEVDMSRPEEGRMSKAGQVLVDLATKRVY 164
BLAST of NO04G04680 vs. NCBI_GenBank
Match: XP_008608510.1 (hypothetical protein SDRG_04612 [Saprolegnia diclina VS20] >XP_012208716.1 hypothetical protein SPRG_22330 [Saprolegnia parasitica CBS 223.65] >EQC38183.1 hypothetical protein SDRG_04612 [Saprolegnia diclina VS20] >KDO20587.1 hypothetical protein SPRG_22330 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 117.1 bits (292), Expect = 4.900e-23 Identity = 68/156 (43.59%), Postives = 96/156 (61.54%), Query Frame = 0 Query: 3 NASMRAAAAQYINPAVKLSHKTTVIRLYRKSLKTLNSWAIDREVFLSEANKIRSEFSSNAHLAPESGKVKALVREAQEKLLTHSHPDKYILPWMPGGTLFMRNPPLPFDVVFA-GHVPEELHEEP---INIDMTPVVKGEKGDGRVLVDSANKAYF 155 N + AA A LSHK V RLY++SLK L+SWAIDR ++ EA KIR++F +N + + + L+R+AQ KL+ +HPD Y++ MPGG+ FMRNPPLP +V F G +P+++ P INID TP + E + VLVD K+ + Sbjct: 6 NHAFLQAALSVRGAAPTLSHKQQVTRLYKRSLKLLDSWAIDRRLWNDEATKIRAQFDANKFAS--AAVAERLIRDAQAKLVEFTHPDPYVVVHMPGGSKFMRNPPLPLEVCFPDGVIPDDVEVSPLKAINIDTTPYREDELKE-TVLVDFPTKSSY 158 The following BLAST results are available for this feature:
BLAST of NO04G04680 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20 Position : 0 Zoom : x 1
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO04G04680 ID=NO04G04680|Name=NO04G04680|organism=Nannochloropsis oceanica|type=gene|length=1325bpback to top protein sequence of NO04G04680.1 >NO04G04680.1-protein ID=NO04G04680.1-protein|Name=NO04G04680.1|organism=Nannochloropsis oceanica|type=polypeptide|length=155bpback to top Synonyms
Publications
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