NO04G04640, NO04G04640 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO04G04640 vs. NCBI_GenBank
Match: EWM28852.1 (hypothetical protein Naga_100133g16 [Nannochloropsis gaditana]) HSP 1 Score: 247.7 bits (631), Expect = 4.500e-62 Identity = 158/293 (53.92%), Postives = 183/293 (62.46%), Query Frame = 0 Query: 1 MLAAASPLLLLQRRTIVLTFRANGSGYKITSTRVLCPIKSTRAYSASRSGPTRYSTSCCGSSSPLSASFP-SCAPRLPLYPLTTTEGRRSLSTAPSSTNPIKGQEDDGGVLIYEGGHRDVIRTLKRVSLTTCIIGLFSTPFFLTLGSEAVPLAANISLTSIVLLATCGPTILLHAFTKPYIFALRLXXXXXXXXXXXXXXXXXXXXXHTDR--TPDIYFSADTINWLSRRVTTTFKLSDVKPLPRSTRPFVSFSARDRLYFVHGETFPDKDLLEKLLGRPLKKSEMENGGEMN 291 ML+ A LL QRRT + N I S R+ +++ S+ + S + S AS P S A RL P + R+ S+ D VLIY G H VIRTLKRVSLTTCIIGLFSTPFFLTLGSE+VP+AAN++LT IVLLATCGPTILLHAFTKPYIFALR+ R TPD++FSADTI++LSRR+TT+F LSDVKPLP STRPFVSFSARDRLYFVHGETFPDK LL LLGRPLKKSE+E + N Sbjct: 14 MLSTAKFSLLPQRRTSSIVLDLN-----IRSKRMQVTLRNANYLLHSKKSGLQESCTARLSCHLQYASLPTSSACRLRSLPGRGYQSPRTFSSTAG---------DGKAVLIYTGAHAGVIRTLKRVSLTTCIIGLFSTPFFLTLGSESVPMAANVALTGIVLLATCGPTILLHAFTKPYIFALRVAPFVTADNDLEISDSGDKSDRAVRRNTTPDMHFSADTIDFLSRRITTSFNLSDVKPLPNSTRPFVSFSARDRLYFVHGETFPDKHLLHSLLGRPLKKSELEGSEQPN 292
BLAST of NO04G04640 vs. NCBI_GenBank
Match: XP_005854143.1 (hypothetical protein NGA_0204200, partial [Nannochloropsis gaditana CCMP526] >EKU22220.1 hypothetical protein NGA_0204200, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 123.6 bits (309), Expect = 9.900e-25 Identity = 68/99 (68.69%), Postives = 73/99 (73.74%), Query Frame = 0 Query: 105 DDGGVLIYEGGHRDVIRTLKRVSLTTCIIGLFSTPFFLTLGSEAVPL------------------AANISLTSIVLLATCGPTILLHAFTKPYIFALRL 186 D VLIY G H VIRTLKRVSLTTCIIGLFSTPFFLTLGSE+VP+ AAN++LT IVLLATCGPTILLHAFTKPYIFALR+ Sbjct: 30 DGKAVLIYTGAHAGVIRTLKRVSLTTCIIGLFSTPFFLTLGSESVPMKKGMHECKVCMGWISPHTAANVALTGIVLLATCGPTILLHAFTKPYIFALRV 128
BLAST of NO04G04640 vs. NCBI_GenBank
Match: XP_015631602.1 (PREDICTED: transmembrane protein 70, mitochondrial [Oryza sativa Japonica Group] >AAO66526.1 expressed protein [Oryza sativa Japonica Group] >ABF99955.1 expressed protein [Oryza sativa Japonica Group] >EAY92632.1 hypothetical protein OsI_14376 [Oryza sativa Indica Group] >BAG95759.1 unnamed protein product [Oryza sativa Japonica Group] >BAG87167.1 unnamed protein product [Oryza sativa Japonica Group] >EEE60324.1 hypothetical protein OsJ_13412 [Oryza sativa Japonica Group] >BAS87417.1 Os03g0853800 [Oryza sativa Japonica Group]) HSP 1 Score: 81.3 bits (199), Expect = 5.600e-12 Identity = 59/203 (29.06%), Postives = 90/203 (44.33%), Query Frame = 0 Query: 83 TTEGRRSLSTAPSSTNPIKGQEDDGGVLIYEGGHRDVIRTLKRVSLTTCIIGLFSTPFFLTLGSEAVPLAANISLTSIVLLATCGPTILLHAFTKPYIFALRLXXXXXXXXXXXXXXXXXXXXXHTDRTPDIYFSADTINWLSRRVTTTFKLSDVKPLPRSTRPFVSFSARDRLYFVHGETFPDKDLLEKLLGRPLKKSEMEN 286 T +S P S + +DD L+Y+G IR +K +SL+TC + + P + S + + ++ S V+ + T LH F PYI LR R F A+ ++WL+ +T T K +DV+P P + RPFV+F A YFV E FP+K LL +L + +S +N Sbjct: 84 TENSGSKISIGPKSKQIKEDDKDDR--LVYQGPISSTIRKVKLLSLSTCCLSVSLGPVITFMTSPDMNVILKGAVASTVIFLSATTTAALHWFVSPYIHKLRW------------------------RPGSDSFEAEIMSWLATPLTRTIKFADVRP-PETNRPFVTFRAEGNFYFVDAEHFPNKALLARLTPKHPNESAFKN 259
BLAST of NO04G04640 vs. NCBI_GenBank
Match: XP_006650918.1 (PREDICTED: uncharacterized protein LOC102719753 [Oryza brachyantha]) HSP 1 Score: 80.5 bits (197), Expect = 9.600e-12 Identity = 58/192 (30.21%), Postives = 89/192 (46.35%), Query Frame = 0 Query: 82 TTTEGRRSLSTAPSSTNPIKGQEDDGGVLIYEGGHRDVIRTLKRVSLTTCIIGLFSTPFFLTLGSEAVPLAANISLTSIVLLATCGPTILLHAFTKPYIFALRLXXXXXXXXXXXXXXXXXXXXXHTDRTPDIYFSADTINWLSRRVTTTFKLSDVKPLPRSTRPFVSFSARDRLYFVHGETFPDKDLLEKL 274 T T G + +S P + I+ +D+G L+Y+G I+ +K +SL+TC + + P + S + + ++ S V+ + T LH F PYI LR R F A+T+ WL+ +T T K +DV+P P + RPFV+F A YFV E F +K LL +L Sbjct: 84 TETSGSK-ISIGPKAKKNIEDDKDEG--LVYQGPISSTIKKVKLLSLSTCCLSVSLGPVITFMTSPDMNVILKGAVASTVIFLSATTTAALHWFVSPYIHKLRW------------------------RPGSDSFEAETMTWLATPLTRTVKFADVRP-PETNRPFVTFKADGNFYFVDAEHFSNKALLARL 247
BLAST of NO04G04640 vs. NCBI_GenBank
Match: XP_009836773.1 (hypothetical protein H257_11506 [Aphanomyces astaci] >ETV73837.1 hypothetical protein H257_11506 [Aphanomyces astaci]) HSP 1 Score: 80.5 bits (197), Expect = 9.600e-12 Identity = 52/173 (30.06%), Postives = 84/173 (48.55%), Query Frame = 0 Query: 110 LIYEGGHRDVIRTLKRVSLTTCIIGLFSTPFFLTLGSEAVPLAANISLTSIVLLATCGPTILLHAFTKPYIFALRLXXXXXXXXXXXXXXXXXXXXXHTDRTPDIYFSADTINWLSRRVTTTFKLSDVKPLPRSTRPFVSFSARDRLYFVHGETFPDKD--LLEKLLGRPLKK 281 LIYE +R +K VS+T+C + P GS + A ++ S ++ G T L H KPY+ L + DR ++ + +T+N L+ + T+ F+L+D +S P ++F A+D+ YFVH E F + D ++EKLLGRPL++ Sbjct: 47 LIYEAPLARPVRMMKAVSVTSCTLTSIGMPVTCIYGSVLSSVVAQWAMCSTIMFFGMGTTALFHVLFKPYVLRLWI-----------------------DRDSEL-VTVETLNLLAAKTTSAFQLTDATFPDKSMHPMINFKAKDKHYFVHPEAFDEADRAVVEKLLGRPLEE 195
BLAST of NO04G04640 vs. NCBI_GenBank
Match: OEL27532.1 (hypothetical protein BAE44_0011450 [Dichanthelium oligosanthes]) HSP 1 Score: 80.5 bits (197), Expect = 9.600e-12 Identity = 58/195 (29.74%), Postives = 86/195 (44.10%), Query Frame = 0 Query: 84 TEGRRSLSTAPSSTNPIKGQEDDGGVLIYEGGHRDVIRTLKRVSLTTCIIGLFSTPFFLTLGSEAVPLAANISLTSIVLLATCGPTILLHAFTKPYIFALRLXXXXXXXXXXXXXXXXXXXXXHTDRTPDIYFSADTINWLSRRVTTTFKLSDVKPLPRSTRPFVSFSARDRLYFVHGETFPDKDLLEKLLGRPL 279 TE S + IK +DDG L+Y+G I+ +K +SL+TC + + P + S + + ++ S V+ + T LH F PYI LR R F A+ ++WL+ + T K +DV+P P S RPFV+F A YFV E F +K LL +L + L Sbjct: 84 TEASGSKISIGPKPKQIKDDDDDGN-LVYQGPISSTIKKVKLLSLSTCCLSVSLGPVITFMTSPGMNVILKGAVASTVIFLSATTTAALHWFVSPYIHKLRW------------------------RPGSDSFEAEVLSWLATPLKRTIKFADVRP-PESNRPFVTFKAEGNFYFVDAEHFSNKALLARLTPQKL 252
BLAST of NO04G04640 vs. NCBI_GenBank
Match: BAF13846.1 (Os03g0853800 [Oryza sativa Japonica Group] >BAS87416.1 Os03g0853800 [Oryza sativa Japonica Group]) HSP 1 Score: 80.1 bits (196), Expect = 1.300e-11 Identity = 54/183 (29.51%), Postives = 84/183 (45.90%), Query Frame = 0 Query: 103 QEDDGGVLIYEGGHRDVIRTLKRVSLTTCIIGLFSTPFFLTLGSEAVPLAANISLTSIVLLATCGPTILLHAFTKPYIFALRLXXXXXXXXXXXXXXXXXXXXXHTDRTPDIYFSADTINWLSRRVTTTFKLSDVKPLPRSTRPFVSFSARDRLYFVHGETFPDKDLLEKLLGRPLKKSEMEN 286 ++D L+Y+G IR +K +SL+TC + + P + S + + ++ S V+ + T LH F PYI LR R F A+ ++WL+ +T T K +DV+P P + RPFV+F A YFV E FP+K LL +L + +S +N Sbjct: 64 EDDKDDRLVYQGPISSTIRKVKLLSLSTCCLSVSLGPVITFMTSPDMNVILKGAVASTVIFLSATTTAALHWFVSPYIHKLRW------------------------RPGSDSFEAEIMSWLATPLTRTIKFADVRP-PETNRPFVTFRAEGNFYFVDAEHFPNKALLARLTPKHPNESAFKN 221
BLAST of NO04G04640 vs. NCBI_GenBank
Match: XP_004981006.1 (uncharacterized protein LOC101770128 [Setaria italica]) HSP 1 Score: 78.6 bits (192), Expect = 3.600e-11 Identity = 51/176 (28.98%), Postives = 81/176 (46.02%), Query Frame = 0 Query: 103 QEDDGGVLIYEGGHRDVIRTLKRVSLTTCIIGLFSTPFFLTLGSEAVPLAANISLTSIVLLATCGPTILLHAFTKPYIFALRLXXXXXXXXXXXXXXXXXXXXXHTDRTPDIYFSADTINWLSRRVTTTFKLSDVKPLPRSTRPFVSFSARDRLYFVHGETFPDKDLLEKLLGRPL 279 ++DD L+Y G +I+ +K +SL+TC + + P + S + + ++ S V+ + T LH F PYI LR R F A+ ++WL+ + T K +D++P P + RPFV+F A YFV GE F +K LL +L + L Sbjct: 103 EDDDDSNLVYHGPISSIIKKVKLLSLSTCCLSVSLGPVITFMTSPDMNVILKGAVASTVIFLSATTTAALHWFVSPYIHKLRW------------------------RPGSDSFEAEVMSWLATPLKRTIKFADIRP-PETNRPFVTFKAEGNFYFVDGEHFSNKALLARLTPQKL 253
BLAST of NO04G04640 vs. NCBI_GenBank
Match: XP_008869821.1 (hypothetical protein H310_06499 [Aphanomyces invadans] >ETW01973.1 hypothetical protein H310_06499 [Aphanomyces invadans]) HSP 1 Score: 77.8 bits (190), Expect = 6.200e-11 Identity = 51/170 (30.00%), Postives = 80/170 (47.06%), Query Frame = 0 Query: 110 LIYEGGHRDVIRTLKRVSLTTCIIGLFSTPFFLTLGSEAVPLAANISLTSIVLLATCGPTILLHAFTKPYIFALRLXXXXXXXXXXXXXXXXXXXXXHTDRTPDIYFSADTINWLSRRVTTTFKLSDVKPLPRSTRPFVSFSARDRLYFVHGETF--PDKDLLEKLLGRP 278 LIYE +R +K VS+T+C + P GS L A ++ V++ G T L H KPY+ L + +R + + +T+N L+ + TT F+L+D +S P ++F A+D+ YFVH E F D+ ++E+LLGRP Sbjct: 45 LIYEAPLARPVRMMKAVSITSCTLTSIGMPITCMYGSVTSSLVAQWAMCGTVMIFGMGTTALFHVLFKPYVLRLWI-----------------------NRNSET-VTVETLNLLAAKTTTDFQLADATFPDKSMHPMINFKAKDKHYFVHPEAFGEDDRSVVERLLGRP 190
BLAST of NO04G04640 vs. NCBI_GenBank
Match: GAX99622.1 (Hypothetical protein PINS_007466 [Pythium insidiosum]) HSP 1 Score: 76.6 bits (187), Expect = 1.400e-10 Identity = 52/193 (26.94%), Postives = 85/193 (44.04%), Query Frame = 0 Query: 87 RRSLSTAPSSTNPIKGQEDDGGVLIYEGGHRDVIRTLKRVSLTTCIIGLFSTPFFLTLGSEAVPLAANISLTSIVLLATCGPTILLHAFTKPYIFALRLXXXXXXXXXXXXXXXXXXXXXHTDRTPDIYFSADTINWLSRRVTTTFKLSDVKPLPRSTRPFVSFSARDRLYFVHGETFPDKDLLEKLLGRPLK 280 RR LS++ +ST E L+Y+ +R +K VS+T+C + L P L ++ + ++ ++L G T L H KPY+ + + DR+ + +A+T+ +R TT F L DV P+S P +SF A + YF+H E D DL++ +G K Sbjct: 46 RRGLSSSSTSTXXATXPE-----LVYQAPMARAVRLMKGVSVTSCALTLVGMPALCVLSEQSASIIGKWAMCGTIMLFGLGTTSLYHVLFKPYVMRMWI-----------------------DRSEN-RVTAETVTLFARLTTTDFALGDVTRPPKSMHPMISFRAGEXDYFIHPECLQDDDLVKVFMGEDFK 209 The following BLAST results are available for this feature:
BLAST of NO04G04640 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO04G04640 ID=NO04G04640|Name=NO04G04640|organism=Nannochloropsis oceanica|type=gene|length=1101bpback to top protein sequence of NO04G04640.1 >NO04G04640.1-protein ID=NO04G04640.1-protein|Name=NO04G04640.1|organism=Nannochloropsis oceanica|type=polypeptide|length=292bpback to top Synonyms
Publications
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