NO04G04590, NO04G04590 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO04G04590 vs. NCBI_GenBank
Match: EWM28831.1 (protein phosphatase 2c [Nannochloropsis gaditana] >EWM28832.1 protein phosphatase 2c [Nannochloropsis gaditana]) HSP 1 Score: 353.2 bits (905), Expect = 9.000e-94 Identity = 199/320 (62.19%), Postives = 230/320 (71.88%), Query Frame = 0 Query: 7 SFSSASTPSSGEPPPWSPLTSLVPSVLFAIVLLYGLHHLLRFLFNTLSPHPTPAFSSSRSSSIISDGQAHVHCNRDNSSDLMRALDDIDSP-SQTIPPSSLYSPS-TPPSPFPSNVHLPCSHWAETGGRQYMEDRLSFRGRLEGRNDASLYAVFDGHGGALASEFCAQELPRYVVGSEEGWEVATKAALRDAFMKTDAAFVKATEGTNRLDGTTALVALIRGTQLFVANAGDSRAILVQRGARVVPLSRDHKPSLPDELQRITEMGGKVIFWGRWRVEGILAVSRAIGDMHLKPYVTPEPEVTEWEVAEDDLFLILASDG 325 S S+++ P + P P S V +L +LY +L L ++L PA + + +S G S L A SP S T YS S T P+ VHLPCSHWAETGGRQYMEDRLSFRGRL GR DASLYA FDGHGGALASEFCAQELP Y+V SE+ WE+ATK+AL+DAF +TDAAF +A GT+RLDGTTALV+++ G +LFVANAGDSRAILVQRGARVVPLSRDHKPSLPDEL+RIT +GGKVIFWGRWRVEG+LAVSRAIGD HLKPYVTPEPEVTEWE+ E D FL++ASDG Sbjct: 9 SLSASTIPDA----PSLPFGSHVLGLLLCFAILYVALRILFTLVHSLFLRSNPAMPGAPTVPRLSGGW--------RSWYLAGACGAKASPLSSTAGHPVPYSSSPTDVERQPNQVHLPCSHWAETGGRQYMEDRLSFRGRLGGREDASLYACFDGHGGALASEFCAQELPGYLVESEKNWEMATKSALKDAFAQTDAAFAQALAGTDRLDGTTALVSVVVGDKLFVANAGDSRAILVQRGARVVPLSRDHKPSLPDELERITGLGGKVIFWGRWRVEGVLAVSRAIGDAHLKPYVTPEPEVTEWEITEKDHFLVVASDG 316
BLAST of NO04G04590 vs. NCBI_GenBank
Match: OQS04866.1 (phosphatase 2C [Thraustotheca clavata]) HSP 1 Score: 211.5 bits (537), Expect = 4.200e-51 Identity = 108/194 (55.67%), Postives = 135/194 (69.59%), Query Frame = 0 Query: 131 GGRQYMEDRLSFRGRLEGRNDASLYAVFDGHGGALASEFCAQELPRYVVGSEEGWEVATKAALRDAFMKTDAAFVKATEGTNRLDGTTALVALIRGTQLFVANAGDSRAILVQRGARVVPLSRDHKPSLPDELQRITEMGGKVIFWGRWRVEGILAVSRAIGDMHLKPYVTPEPEVTEWEVAEDDLFLILASDG 325 G R YMEDR + G L G +AS Y VFDGHGG ASE+CA+ L ++ + ++ K AL F++TDA +V+ NR DGTTA+ L +G ++VAN GDSRAILV++ VV LS DHKP+ DE +R+T MGG VIFWG WRVEGILAVSRAIGD LKPYV EPE+T+ E ++DD F+ILASDG Sbjct: 59 GKRPYMEDRFTAVGTLNGDPNASFYGVFDGHGGDGASEYCAEMLCDNIM-QDPMYQQYPKEALTKGFLRTDAEYVQYANRRNRDDGTTAVTVLAKGNTIYVANVGDSRAILVKKNGEVVALSTDHKPNRADERERVTNMGGHVIFWGVWRVEGILAVSRAIGDRMLKPYVIAEPEITQHERSDDDAFIILASDG 251
BLAST of NO04G04590 vs. NCBI_GenBank
Match: OQR88114.1 (protein phosphatase 2C [Achlya hypogyna]) HSP 1 Score: 210.3 bits (534), Expect = 9.400e-51 Identity = 109/194 (56.19%), Postives = 129/194 (66.49%), Query Frame = 0 Query: 131 GGRQYMEDRLSFRGRLEGRNDASLYAVFDGHGGALASEFCAQELPRYVVGSEEGWEVATKAALRDAFMKTDAAFVKATEGTNRLDGTTALVALIRGTQLFVANAGDSRAILVQRGARVVPLSRDHKPSLPDELQRITEMGGKVIFWGRWRVEGILAVSRAIGDMHLKPYVTPEPEVTEWEVAEDDLFLILASDG 325 G R YMEDR G L G+ DAS Y VFDGHGG ASE+CA+ L V + + K AL F++TD + + NR DGTTA+ L +G L+VAN GDSRAILV++ V LS DHKP+ PDE +R+T MGG VIFWG WRVEGILAVSRAIGD LKPYV EPE+T+ E DD FL+LASDG Sbjct: 68 GKRPYMEDRYVASGTLNGKADASFYGVFDGHGGDGASEYCAEMLCANVT-QDPMYTQYPKEALTKGFLRTDEDYTQLANRRNRDDGTTAVTVLAQGNTLYVANVGDSRAILVKKDGEAVALSTDHKPNRPDERERVTNMGGHVIFWGVWRVEGILAVSRAIGDRMLKPYVIAEPEITQHERTADDAFLVLASDG 260
BLAST of NO04G04590 vs. NCBI_GenBank
Match: XP_009839062.1 (hypothetical protein H257_13288, partial [Aphanomyces astaci] >ETV71394.1 hypothetical protein H257_13288, partial [Aphanomyces astaci]) HSP 1 Score: 207.2 bits (526), Expect = 8.000e-50 Identity = 104/194 (53.61%), Postives = 132/194 (68.04%), Query Frame = 0 Query: 131 GGRQYMEDRLSFRGRLEGRNDASLYAVFDGHGGALASEFCAQELPRYVVGSEEGWEVATKAALRDAFMKTDAAFVKATEGTNRLDGTTALVALIRGTQLFVANAGDSRAILVQRGARVVPLSRDHKPSLPDELQRITEMGGKVIFWGRWRVEGILAVSRAIGDMHLKPYVTPEPEVTEWEVAEDDLFLILASDG 325 G R YMEDR + G L G +S Y VFDGHGG ASE+C L V+ ++ + K AL F+KTD +++ + N+ DGTTA+ ++RG ++VAN GDSRA+L+++ VPLS DHKP+ PDE +R+T MGG VIFWG WRVEGILAVSRAIGD LKPYV EPE+ E + EDDL L+LASDG Sbjct: 68 GKRPYMEDRHTVVGTLNGDPSSSFYGVFDGHGGDGASEYCVASLCSNVI-TDPAFAHDPKLALSRGFVKTDKDYIQLADRYNKDDGTTAIAVVVRGDTIYVANVGDSRAVLIKKSGDAVPLSSDHKPNRPDERERVTNMGGHVIFWGVWRVEGILAVSRAIGDRMLKPYVIAEPELIETQRTEDDLCLVLASDG 260
BLAST of NO04G04590 vs. NCBI_GenBank
Match: XP_009839060.1 (hypothetical protein, variant 1 [Aphanomyces astaci] >ETV71395.1 hypothetical protein, variant 1 [Aphanomyces astaci]) HSP 1 Score: 207.2 bits (526), Expect = 8.000e-50 Identity = 104/194 (53.61%), Postives = 132/194 (68.04%), Query Frame = 0 Query: 131 GGRQYMEDRLSFRGRLEGRNDASLYAVFDGHGGALASEFCAQELPRYVVGSEEGWEVATKAALRDAFMKTDAAFVKATEGTNRLDGTTALVALIRGTQLFVANAGDSRAILVQRGARVVPLSRDHKPSLPDELQRITEMGGKVIFWGRWRVEGILAVSRAIGDMHLKPYVTPEPEVTEWEVAEDDLFLILASDG 325 G R YMEDR + G L G +S Y VFDGHGG ASE+C L V+ ++ + K AL F+KTD +++ + N+ DGTTA+ ++RG ++VAN GDSRA+L+++ VPLS DHKP+ PDE +R+T MGG VIFWG WRVEGILAVSRAIGD LKPYV EPE+ E + EDDL L+LASDG Sbjct: 3 GKRPYMEDRHTVVGTLNGDPSSSFYGVFDGHGGDGASEYCVASLCSNVI-TDPAFAHDPKLALSRGFVKTDKDYIQLADRYNKDDGTTAIAVVVRGDTIYVANVGDSRAVLIKKSGDAVPLSSDHKPNRPDERERVTNMGGHVIFWGVWRVEGILAVSRAIGDRMLKPYVIAEPELIETQRTEDDLCLVLASDG 195
BLAST of NO04G04590 vs. NCBI_GenBank
Match: XP_009839061.1 (hypothetical protein, variant 3, partial [Aphanomyces astaci] >ETV71397.1 hypothetical protein, variant 3, partial [Aphanomyces astaci]) HSP 1 Score: 207.2 bits (526), Expect = 8.000e-50 Identity = 104/194 (53.61%), Postives = 132/194 (68.04%), Query Frame = 0 Query: 131 GGRQYMEDRLSFRGRLEGRNDASLYAVFDGHGGALASEFCAQELPRYVVGSEEGWEVATKAALRDAFMKTDAAFVKATEGTNRLDGTTALVALIRGTQLFVANAGDSRAILVQRGARVVPLSRDHKPSLPDELQRITEMGGKVIFWGRWRVEGILAVSRAIGDMHLKPYVTPEPEVTEWEVAEDDLFLILASDG 325 G R YMEDR + G L G +S Y VFDGHGG ASE+C L V+ ++ + K AL F+KTD +++ + N+ DGTTA+ ++RG ++VAN GDSRA+L+++ VPLS DHKP+ PDE +R+T MGG VIFWG WRVEGILAVSRAIGD LKPYV EPE+ E + EDDL L+LASDG Sbjct: 68 GKRPYMEDRHTVVGTLNGDPSSSFYGVFDGHGGDGASEYCVASLCSNVI-TDPAFAHDPKLALSRGFVKTDKDYIQLADRYNKDDGTTAIAVVVRGDTIYVANVGDSRAVLIKKSGDAVPLSSDHKPNRPDERERVTNMGGHVIFWGVWRVEGILAVSRAIGDRMLKPYVIAEPELIETQRTEDDLCLVLASDG 260
BLAST of NO04G04590 vs. NCBI_GenBank
Match: XP_009839059.1 (hypothetical protein, variant 2 [Aphanomyces astaci] >ETV71396.1 hypothetical protein, variant 2 [Aphanomyces astaci]) HSP 1 Score: 201.4 bits (511), Expect = 4.400e-48 Identity = 101/189 (53.44%), Postives = 129/189 (68.25%), Query Frame = 0 Query: 136 MEDRLSFRGRLEGRNDASLYAVFDGHGGALASEFCAQELPRYVVGSEEGWEVATKAALRDAFMKTDAAFVKATEGTNRLDGTTALVALIRGTQLFVANAGDSRAILVQRGARVVPLSRDHKPSLPDELQRITEMGGKVIFWGRWRVEGILAVSRAIGDMHLKPYVTPEPEVTEWEVAEDDLFLILASDG 325 MEDR + G L G +S Y VFDGHGG ASE+C L V+ ++ + K AL F+KTD +++ + N+ DGTTA+ ++RG ++VAN GDSRA+L+++ VPLS DHKP+ PDE +R+T MGG VIFWG WRVEGILAVSRAIGD LKPYV EPE+ E + EDDL L+LASDG Sbjct: 1 MEDRHTVVGTLNGDPSSSFYGVFDGHGGDGASEYCVASLCSNVI-TDPAFAHDPKLALSRGFVKTDKDYIQLADRYNKDDGTTAIAVVVRGDTIYVANVGDSRAVLIKKSGDAVPLSSDHKPNRPDERERVTNMGGHVIFWGVWRVEGILAVSRAIGDRMLKPYVIAEPELIETQRTEDDLCLVLASDG 188
BLAST of NO04G04590 vs. NCBI_GenBank
Match: XP_012209856.1 (hypothetical protein SPRG_15420 [Saprolegnia parasitica CBS 223.65] >KDO19430.1 hypothetical protein SPRG_15420 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 199.5 bits (506), Expect = 1.700e-47 Identity = 110/224 (49.11%), Postives = 137/224 (61.16%), Query Frame = 0 Query: 102 PPSSLYSPSTPPS-PFPSNVHLPCSHWAETGGRQYMEDRLSFRGRLEGRNDASLYAVFDGHGGALASEFCAQELPRYVVGSEEGWEVATKAALRDAFMKTDAAFVKATEGTNRLDGTTALVALIRGTQLFVANAGDSRAILVQRGARVVPLSRDHKPSLPDELQRITEMGGKVIFWGRWRVEGILAVSRAIGDMHLKPYVTPEPEVTEWEVAEDDLFLILASDG 325 PP + ST S S V P G R YMEDR G L G AS Y VFDGHGG ASE+CA+ + V+ + + K AL F++TD + + NR DGTTA+ L + ++VAN GDSRA+L+++ + LS DHKP+ PDE +R+T MGG VIFWG WRVEGILAVSRAIGD LKPYV EPE+TE E +DD +L+LASDG Sbjct: 44 PPRTEKEASTKRSREIDSTVVYPYGVAEMQGKRPYMEDRYVAVGTLNGDATASFYGVFDGHGGDGASEYCAEMMCNNVI-QDPMYAKYPKEALTKGFLRTDEDYTQVANRRNRDDGTTAVTVLAQRDTIYVANVGDSRAVLIKKDGDAIALSNDHKPNRPDERERVTNMGGHVIFWGVWRVEGILAVSRAIGDRMLKPYVIAEPEITEHERCDDDAYLVLASDG 266
BLAST of NO04G04590 vs. NCBI_GenBank
Match: XP_008619471.1 (hypothetical protein SDRG_15087 [Saprolegnia diclina VS20] >EQC27077.1 hypothetical protein SDRG_15087 [Saprolegnia diclina VS20]) HSP 1 Score: 198.4 bits (503), Expect = 3.700e-47 Identity = 109/225 (48.44%), Postives = 136/225 (60.44%), Query Frame = 0 Query: 100 TIPPSSLYSPSTPPSPFPSNVHLPCSHWAETGGRQYMEDRLSFRGRLEGRNDASLYAVFDGHGGALASEFCAQELPRYVVGSEEGWEVATKAALRDAFMKTDAAFVKATEGTNRLDGTTALVALIRGTQLFVANAGDSRAILVQRGARVVPLSRDHKPSLPDELQRITEMGGKVIFWGRWRVEGILAVSRAIGDMHLKPYVTPEPEVTEWEVAEDDLFLILASDG 325 T P S + S ++V P G R YMEDR G L G AS Y VFDGHGG ASE+CA+ L V+ + + K AL F++TD + + NR DGTTA+ L + ++VAN GDSRA+L+++ + LS DHKP+ PDE +R+T MGG VIFWG WRVEGILAVSRAIGD LKPYV EPE+TE E DD +L+LASDG Sbjct: 43 TPPRSEKEASSKRSREIDNSVLYPYGVAEMQGKRPYMEDRYVAVGTLNGDATASFYGVFDGHGGDGASEYCAEVLCNNVI-QDPMYAKYPKEALTKGFLRTDEDYTQVANRRNRDDGTTAVTVLAQRDTIYVANVGDSRAVLIKKDGDAIALSNDHKPNRPDERERVTNMGGHVIFWGVWRVEGILAVSRAIGDRMLKPYVIAEPEITEHERCADDAYLVLASDG 266
BLAST of NO04G04590 vs. NCBI_GenBank
Match: GAX16893.1 (protein phosphatase [Fistulifera solaris]) HSP 1 Score: 194.5 bits (493), Expect = 5.400e-46 Identity = 104/238 (43.70%), Postives = 145/238 (60.92%), Query Frame = 0 Query: 117 PSNVHLPCSHWAETGGRQYMEDRLSFR--------------------------GRLEGRN---DASLYAVFDGHGGALASEFCAQELPRYVVGSEEGWEVATKAALRDAFMKTDAAFVKATEGTNRLDGTTA-LVALIRGTQLFVANAGDSRAILVQRGARVVPLSRDHKPSLPDELQRITEMGGKVIFWGRWRVEGILAVSRAIGDMHLKPYVTPEPEVTEWEVAEDDLFLILASDG 325 P+ +HL SHW++ GGR YMEDR GR + + +FDGHGG AS+FCA + Y + +++ + A+++ F+ D FV+ T + DG+TA V L+ G ++ ANAGDSRAI+V+R +V LSRDHKP LPDE +RITE+GG+VI WGRWRVEG+L+VSR+IGD LKPYV +PE+ E+++ +DDLFLI++SDG Sbjct: 169 PNGIHLNVSHWSDEGGRPYMEDRYCVENLDAVQVEVSPAVDVKSNSQDVEVTYGRKRTQRLTMPLTFLGIFDGHGGDKASQFCADWMTAY-LRNDKSYPYDLGYAMKNTFLSVDDDFVR----TGQPDGSTACAVTLVGGRRVVCANAGDSRAIIVRRDGSIVRLSRDHKPGLPDETRRITELGGRVIHWGRWRVEGLLSVSRSIGDASLKPYVIADPEICEYDIGKDDLFLIVSSDG 401 The following BLAST results are available for this feature:
BLAST of NO04G04590 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO04G04590 ID=NO04G04590|Name=NO04G04590|organism=Nannochloropsis oceanica|type=gene|length=4157bpback to top protein sequence of NO04G04590.1 >NO04G04590.1-protein ID=NO04G04590.1-protein|Name=NO04G04590.1|organism=Nannochloropsis oceanica|type=polypeptide|length=398bpback to top protein sequence of NO04G04590.2 >NO04G04590.2-protein ID=NO04G04590.2-protein|Name=NO04G04590.2|organism=Nannochloropsis oceanica|type=polypeptide|length=311bpback to top protein sequence of NO04G04590.3 >NO04G04590.3-protein ID=NO04G04590.3-protein|Name=NO04G04590.3|organism=Nannochloropsis oceanica|type=polypeptide|length=343bpback to top Synonyms
Publications
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