NO04G04570, NO04G04570 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO04G04570 vs. NCBI_GenBank
Match: EWM28840.1 (glutathione transferase [Nannochloropsis gaditana]) HSP 1 Score: 248.4 bits (633), Expect = 2.700e-62 Identity = 149/371 (40.16%), Postives = 164/371 (44.20%), Query Frame = 0 Query: 91 YKGLRLLEWTNALLPQKTLVKTARFGWNTMWKTLMTELAPQSKDGS------------------------------------------------------------------------------------------------------------------------------------------------------------------------YPSINNGVYRCGFATTQGGYEDGVEDVFEGLERVEQILRKQRFLAGSVLTEADVRLFPTIIRFDAVYSTLFKCTRKRIGDYPNLSMWLREVYQLPGVRQTVDLPGLIRSYYVQLFPLNPSGICPVGPTEADLRLLAPHDRAEKF--GGGGEDIFVYK 292 YKGLRLLEWTN L+ QK LVKTAR WN +WK LMTELAPQ KDG YP INNGVYRCGFAT+Q Y+ V DVF GLE VE IL QRFLAG VLTEADVRLFPT+IRFDAVY++LFKC KRI DYPNL+ W+REVYQ+PGVR TVD+P LIRSY+VQLFPLNPSGICP GPTE DL++L HDR E+F GGG IF K Sbjct: 57 YKGLRLLEWTNGLISQKALVKTARTSWNMLWKILMTELAPQGKDGEYVRPTYSFTDSLGSPAFPLEEGRYHLYVGNACPWCHRLTLAHALRGLSQSQLSYSYAIDDPERASRGGWAFDTMGEGGGGEAGAPFADPVFGCRDLREVYDLCAPGYTGRCTAPVLVDVKRRRIVNNESSDLLRFLNLFPPPPGQTHPDVDLFPPSLRPRILEINAWVYPLINNGVYRCGFATSQAAYDRSVRDVFRGLESVEAILTDQRFLAGDVLTEADVRLFPTVIRFDAVYASLFKCAGKRIADYPNLTQWMREVYQIPGVRTTVDIPALIRSYFVQLFPLNPSGICPQGPTEEDLKVLERHDREERFVKAGGGGSIFATK 427
BLAST of NO04G04570 vs. NCBI_GenBank
Match: EWM28841.1 (glutathione transferase [Nannochloropsis gaditana]) HSP 1 Score: 243.8 bits (621), Expect = 6.600e-61 Identity = 114/157 (72.61%), Postives = 127/157 (80.89%), Query Frame = 0 Query: 137 YPSINNGVYRCGFATTQGGYEDGVEDVFEGLERVEQILRKQRFLAGSVLTEADVRLFPTIIRFDAVYSTLFKCTRKRIGDYPNLSMWLREVYQLPGVRQTVDLPGLIRSYYVQLFPLNPSGICPVGPTEADLRLLAPHDRAEKF--GGGGEDIFVYK 292 YP INNGVYRCGFAT+Q Y+ V DVF GLE VE IL QRFLAG VLTEADVRLFPT+IRFDAVY++LFKC KRI DYPNL+ W+REVYQ+PGVR TVD+P LIRSY+VQLFPLNPSGICP GPTE DL++L HDR E+F GGG IF K Sbjct: 339 YPLINNGVYRCGFATSQAAYDRSVRDVFRGLESVEAILTDQRFLAGDVLTEADVRLFPTVIRFDAVYASLFKCAGKRIADYPNLTQWMREVYQIPGVRTTVDIPALIRSYFVQLFPLNPSGICPQGPTEEDLKVLERHDREERFVKAGGGGSIFATK 495
BLAST of NO04G04570 vs. NCBI_GenBank
Match: XP_003058945.1 (predicted protein [Micromonas pusilla CCMP1545] >EEH57400.1 predicted protein [Micromonas pusilla CCMP1545]) HSP 1 Score: 176.8 bits (447), Expect = 9.900e-41 Identity = 83/134 (61.94%), Postives = 101/134 (75.37%), Query Frame = 0 Query: 137 YPSINNGVYRCGFATTQGGYEDGVEDVFEGLERVEQILRKQRFLAGSVLTEADVRLFPTIIRFDAVYSTLFKCTRKRIGDYPNLSMWLREVYQLPGVRQTVDLPGLIRSYYVQLFPLNPSGICPVGPTEADLRL 271 Y +NNGVYRCGFAT+Q YE DV L +VE+ L + RFL G +TEADVRLFPTI+RFDAVY+TLFKC+ R+ D P +S ++++VY LPGVR+TVDL G SY+ QLFPLNP GI P+GPTEADL L Sbjct: 195 YRGLNNGVYRCGFATSQAAYERAATDVKTTLLKVEKRLSESRFLCGDKITEADVRLFPTIVRFDAVYATLFKCSNVRVADLPCVSGFMKDVYALPGVRETVDLAGYRSSYFGQLFPLNPGGIVPIGPTEADLGL 328
BLAST of NO04G04570 vs. NCBI_GenBank
Match: XP_002508255.1 (predicted protein [Micromonas commoda] >ACO69513.1 predicted protein [Micromonas commoda]) HSP 1 Score: 176.8 bits (447), Expect = 9.900e-41 Identity = 83/158 (52.53%), Postives = 106/158 (67.09%), Query Frame = 0 Query: 134 DGSYPSINNGVYRCGFATTQGGYEDGVEDVFEGLERVEQILRKQRFLAGSVLTEADVRLFPTIIRFDAVYSTLFKCTRKRIGDYPNLSMWLREVYQLPGVRQTVDLPGLIRSYYVQLFPLNPSGICPVGPTEADLRLLAPHDRAEKFGGGGEDIFVYK 292 D Y +NNGVYRCGF+T Q + DV E LE +E+ LR+ RF+ G +TE+DVR FPTI+RFDAVY+TLFKC+ +R+ D PNL W+++ Y LPGVR+TVD+ G SY+ QLFPLNP GI PVGPT DL L R + D+F +K Sbjct: 223 DWLYTKLNNGVYRCGFSTNQAAHNRAAVDVAEALEALEKRLRESRFMHGDKVTESDVRAFPTIVRFDAVYATLFKCSSRRVADMPNLRAWMQDFYLLPGVRETVDVDGYRTSYFGQLFPLNPGGIVPVGPTAKDLGLGLDPSRGSR---AHSDLFHFK 377
BLAST of NO04G04570 vs. NCBI_GenBank
Match: WP_069787164.1 (glutathione S-transferase family protein [Pseudomonas salomonii] >SDZ01474.1 putative glutathione S-transferase [Pseudomonas salomonii]) HSP 1 Score: 173.7 bits (439), Expect = 8.400e-40 Identity = 85/147 (57.82%), Postives = 102/147 (69.39%), Query Frame = 0 Query: 137 YPSINNGVYRCGFATTQGGYEDGVEDVFEGLERVEQILRKQRFLAGSVLTEADVRLFPTIIRFDAVYSTLFKCTRKRIGDYPNLSMWLREVYQLPGVRQTVDLPGLIRSYYVQLFPLNPSGICPVGPTEADLRLLAPHDRAEKFGGG 284 YP++NNGVYR GFAT+Q YE +DVF L+R+EQ L +QR+LAG LTEADVRLF T+IRFDAVY + FKC +RI DYPNLS WLRE+YQ PGV +TVD + YY +NP+GI P GP + R A HDRA G G Sbjct: 185 YPAVNNGVYRAGFATSQQAYESAFDDVFAELDRLEQHLAEQRYLAGEYLTEADVRLFTTLIRFDAVYYSHFKCNLRRIADYPNLSNWLRELYQWPGVAETVDFAHIKGHYYASHRTINPTGIVPKGPLQ---RFDAEHDRARLSGKG 328
BLAST of NO04G04570 vs. NCBI_GenBank
Match: WP_008154838.1 (glutathione S-transferase family protein [Pseudomonas sp. GM41(2012)] >EUB75701.1 Glutathione transferase [Pseudomonas sp. GM41(2012)]) HSP 1 Score: 172.9 bits (437), Expect = 1.400e-39 Identity = 81/147 (55.10%), Postives = 99/147 (67.35%), Query Frame = 0 Query: 137 YPSINNGVYRCGFATTQGGYEDGVEDVFEGLERVEQILRKQRFLAGSVLTEADVRLFPTIIRFDAVYSTLFKCTRKRIGDYPNLSMWLREVYQLPGVRQTVDLPGLIRSYYVQLFPLNPSGICPVGPTEADLRLLAPHDRAEKFGGG 284 YP++NNGVYR GFAT Q YE+ +DVF L+R+EQ+L R+L G LTEAD+RLF T+IRFDAVY FKC +RI DYPNLS WLRE+YQ PG+ +TVD + YY +NP+GI P GP +A APHDR G G Sbjct: 185 YPAVNNGVYRAGFATAQKAYEEAFDDVFNELDRLEQLLGANRYLTGEYLTEADIRLFTTLIRFDAVYHGHFKCNLRRIADYPNLSNWLREIYQWPGIAETVDFEHIKNHYYGSHKTINPTGIVPKGPAQA---FTAPHDRERLSGKG 328
BLAST of NO04G04570 vs. NCBI_GenBank
Match: WP_048383105.1 (glutathione S-transferase family protein [Pseudomonas taetrolens] >KMM83234.1 glutathionyl-hydroquinone reductase YqjG [Pseudomonas taetrolens] >SEC75382.1 putative glutathione S-transferase [Pseudomonas taetrolens]) HSP 1 Score: 172.9 bits (437), Expect = 1.400e-39 Identity = 88/159 (55.35%), Postives = 104/159 (65.41%), Query Frame = 0 Query: 128 LAPQS---KDGSYPSINNGVYRCGFATTQGGYEDGVEDVFEGLERVEQILRKQRFLAGSVLTEADVRLFPTIIRFDAVYSTLFKCTRKRIGDYPNLSMWLREVYQLPGVRQTVDLPGLIRSYYVQLFPLNPSGICPVGPTEADLRLLAPHDRAEKFGGG 284 LAPQ D YP++NNGVYR GFAT+Q YE +DVF LE +E L + R+LAG LTEADVRLF T+IRFDAVY + FKC +RI DYPNLS WLRE+YQ PGV QTVD+ + YY +NP+GI P GP + A HDRA G G Sbjct: 173 LAPQVDSWNDRIYPALNNGVYRAGFATSQSAYEQAFDDVFRELEELEHHLTEHRYLAGEYLTEADVRLFTTLIRFDAVYYSHFKCNERRIVDYPNLSNWLRELYQWPGVAQTVDMTHIKGHYYASHRTINPTGIIPKGPAQ---DFNAAHDRARLAGNG 328
BLAST of NO04G04570 vs. NCBI_GenBank
Match: WP_023381085.1 (MULTISPECIES: glutathione S-transferase family protein [Pseudomonas] >AGZ35765.1 glutathione S-transferase domain-containing protein [Pseudomonas sp. VLB120] >AVD82786.1 glutathione S-transferase family protein [Pseudomonas sp. SWI6]) HSP 1 Score: 172.6 bits (436), Expect = 1.900e-39 Identity = 83/147 (56.46%), Postives = 103/147 (70.07%), Query Frame = 0 Query: 137 YPSINNGVYRCGFATTQGGYEDGVEDVFEGLERVEQILRKQRFLAGSVLTEADVRLFPTIIRFDAVYSTLFKCTRKRIGDYPNLSMWLREVYQLPGVRQTVDLPGLIRSYYVQLFPLNPSGICPVGPTEADLRLLAPHDRAEKFGGG 284 YP++NNGVYR GFATTQ YE +DVF L+ +E +L +QR+LAG LTEADVRLF T+IRFDAVY FKC +R+ DYPNLS WLRE+YQ PGV QTV++ + + YY+ +NP+GI P GP + D L PHDR G G Sbjct: 172 YPTVNNGVYRAGFATTQEAYEAAFDDVFNELDALEDLLSRQRYLAGEYLTEADVRLFTTLIRFDAVYHGHFKCNLRRLADYPNLSNWLRELYQWPGVAQTVNMEHIQKHYYMSHKTINPTGIVPKGPLQ-DFNL--PHDRQRLVGKG 315
BLAST of NO04G04570 vs. NCBI_GenBank
Match: WP_104883567.1 (glutathione S-transferase family protein [Pseudomonas sp. SWI44] >AVD89742.1 glutathione-dependent reductase [Pseudomonas sp. SWI44]) HSP 1 Score: 172.6 bits (436), Expect = 1.900e-39 Identity = 83/147 (56.46%), Postives = 103/147 (70.07%), Query Frame = 0 Query: 137 YPSINNGVYRCGFATTQGGYEDGVEDVFEGLERVEQILRKQRFLAGSVLTEADVRLFPTIIRFDAVYSTLFKCTRKRIGDYPNLSMWLREVYQLPGVRQTVDLPGLIRSYYVQLFPLNPSGICPVGPTEADLRLLAPHDRAEKFGGG 284 YP++NNGVYR GFATTQ YE +DVF L+ +E +L +QR+LAG LTEADVRLF T+IRFDAVY FKC +R+ DYPNLS WLRE+YQ PGV QTV++ + + YY+ +NP+GI P GP + D L PHDR G G Sbjct: 172 YPTVNNGVYRAGFATTQEAYEAAFDDVFNELDALEDLLSRQRYLAGEYLTEADVRLFTTLIRFDAVYHGHFKCNLRRLADYPNLSNWLRELYQWPGVAQTVNMEHIQKHYYMSHKTINPTGIVPKGPLQ-DFNL--PHDRQRLVGKG 315
BLAST of NO04G04570 vs. NCBI_GenBank
Match: PSC72761.1 (glutathione S-transferase [Micractinium conductrix]) HSP 1 Score: 172.6 bits (436), Expect = 1.900e-39 Identity = 114/351 (32.48%), Postives = 140/351 (39.89%), Query Frame = 0 Query: 92 KGLRLLEWTNALLPQKTLVKTARFGWNTMWKTLMTELAPQSKDGS----------------------------------------------------------------------------------------------------------------------------------------------------------------YPSINNGVYRCGFATTQGGYEDGVEDVFEGLERVEQILRKQRFLAGSVLTEADVRLFPTIIRFDAVYSTLFKCTRKRIGDYPNLSMWLREVYQL--PG----VRQTVDLPGLIRSYYVQLFPLNPSGICPVGPTEADLRLLAPHDR 277 +GL +LEWT A++PQ LVKTA+ GW T W+ LMTELAPQSKDGS Y ++NNGVY+CGFATTQ G+ +F L +E +L +QRFL G LTEAD+RLFPTI+RFDAVY+TLFKC R+R D+P+LS+W+R+V+QL PG + +DL RSYY QLFPLNP GI P GPT ADL L P R Sbjct: 272 RGLGVLEWTGAIVPQGMLVKTAKLGWRTAWQALMTELAPQSKDGSYQRPAYAFGGRLGTPEFPLEAGRYHLYVGNPCPWCHRVLLALAVTGLAGAISYSRATDDPERASRGGWVFDGPQGDPVFGCKDLREVYDLLSPGFSGRCTAPLLVDVKARKAVCNESSIITRNLIELAAAGGFGAAAPGSGVDLHPAGQGAEIDAWNERVYETVNNGVYKCGFATTQEGFSKAEAQLFTTLGEIEGVLSRQRFLCGERLTEADLRLFPTIVRFDAVYATLFKCCRRRAADFPHLSVWMRDVHQLQVPGSTLQIADCLDLEDARRSYYGQLFPLNPGGIVPSGPTAADLGLETPVGR 622 The following BLAST results are available for this feature:
BLAST of NO04G04570 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20 Position : 0 Zoom : x 1
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO04G04570 ID=NO04G04570|Name=NO04G04570|organism=Nannochloropsis oceanica|type=gene|length=1979bpback to top protein sequence of NO04G04570.1 >NO04G04570.1-protein ID=NO04G04570.1-protein|Name=NO04G04570.1|organism=Nannochloropsis oceanica|type=polypeptide|length=293bpback to top Synonyms
Publications
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