NO04G04560, NO04G04560 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO04G04560 vs. NCBI_GenBank
Match: XP_009032695.1 (hypothetical protein AURANDRAFT_19240 [Aureococcus anophagefferens] >EGB13096.1 hypothetical protein AURANDRAFT_19240 [Aureococcus anophagefferens]) HSP 1 Score: 183.7 bits (465), Expect = 5.500e-43 Identity = 86/175 (49.14%), Postives = 116/175 (66.29%), Query Frame = 0 Query: 3 TPGLVSAAMAPYVESMYEE--CLSPRCTEKCRNRQIGNLTKAEEYEALTGFYVSIAGWSYGTPPCDDACDAQDLDLLKANVAEYGPASICVNAESWGLYVEGVLMTEACGSYAYDSLDHCVNIVGYNDNAPEPYFVVRNSWSTLWGMDGHIRLSSRNNTCGLANEVTFVSIAPEE 176 TPGL + PYV+ M + CLSP+CTE CR G T+ EE LTG Y +A +S+ T C D C+ QDL L+ VA +GPASICVNA +W +Y GV+ T CGSY ++ LDHCV +VG+N ++ PY++V+N WST WG+DG+I L +RNNTCG+A+ TF + P + Sbjct: 70 TPGLSNLWYYPYVQGMGSQRTCLSPKCTETCR----GIGTEVEE-TLLTGVYAQVANYSWATKGCFDDCEDQDLYGLRKAVAAHGPASICVNAANWDVYAGGVMSTATCGSYNFNDLDHCVGLVGFNMDSDPPYWIVKNQWSTTWGVDGYIFLDARNNTCGVADTATFAKVFPPD 239
BLAST of NO04G04560 vs. NCBI_GenBank
Match: KOO22621.1 (cysteine proteinase [Chrysochromulina sp. CCMP291]) HSP 1 Score: 136.7 bits (343), Expect = 7.600e-29 Identity = 68/169 (40.24%), Postives = 97/169 (57.40%), Query Frame = 0 Query: 5 GLVSAAMAPYVESMYEECLSPRCTEKCRNRQIGNLTKAEEYEALTGFYVSIAGWSYGTPPC-DDACDAQDLDLLKANVAEYGPASICVNAESWGLYVEGVLMTEACGSYAYDSLDHCVNIVGYNDNAPEPYFVVRNSWSTLWGMDGHIRLSSRNNTCGLANEVTFVSIA 173 GL ++ PY++S+ + T+ C ++ + LTG Y +++G+ Y T PC AC QDL L+A + E P S+CVNA SW Y GV+ + ACGS A + DHCV G+N AP PY++VRNSWS+ WG G+I L NTCG+A++ T +A Sbjct: 199 GLTNSFNYPYMQSL----TATSATQACNTAKVAAID--GPMMQLTGGYAAVSGYHYATTPCTSGACANQDLAALQAAI-ETTPVSVCVNAASWNDYTGGVMTSAACGSMAAKAQDHCVMATGFNTTAPTPYWIVRNSWSSTWGEYGYIYLEMAENTCGIADDATIPEVA 360
BLAST of NO04G04560 vs. NCBI_GenBank
Match: OLQ02337.1 (Digestive cysteine proteinase 2 [Symbiodinium microadriaticum]) HSP 1 Score: 129.8 bits (325), Expect = 9.300e-27 Identity = 61/138 (44.20%), Postives = 83/138 (60.14%), Query Frame = 0 Query: 45 YEALTGFYVSIAGWSYGTPPC-DDACDAQDLDLLKANVAEYGPASICVNAESWGLYVEGVLMTEACGSYAYDSLDHCVNIVGYNDNAPEPYFVVRNSWSTLWGMDGHIRLSSRNNTCGLANEVTFVSIAPEEEEEGGR 182 Y L+G Y ++ G+SY PC + +C+ QDL+ L A E P S+CVNA W Y GVL + ACG DHCV VG+N AP+PY++VRNSW++ WGM G+I L NTCG+A++ T + + EE R Sbjct: 2692 YMQLSGGYAAVTGYSYAVKPCTEGSCENQDLNGLAA-ALEQSPISVCVNAGVWNDYTGGVLSSAACGPMGAAYQDHCVMAVGFNATAPKPYWIVRNSWASTWGMQGYIYLEMAKNTCGVADDATIPEVKVDLSEEEAR 2828
BLAST of NO04G04560 vs. NCBI_GenBank
Match: XP_009040822.1 (hypothetical protein AURANDRAFT_5922, partial [Aureococcus anophagefferens] >EGB04435.1 hypothetical protein AURANDRAFT_5922, partial [Aureococcus anophagefferens]) HSP 1 Score: 124.0 bits (310), Expect = 5.100e-25 Identity = 74/181 (40.88%), Postives = 89/181 (49.17%), Query Frame = 0 Query: 10 AMAPYVESMYEECLSPRCTEK-----CRNRQIGNLTKAEEYEALT---GFYVSIAGWSY----------GTPPCDDACDAQDLDLLKANVAEYGPASICVNAESWGLYVEGVLMTEACGSYAYDSLDHCVNIVGYNDNAPE-PYFVVRNSWSTLWGMDGHIRLSSRNNTCGLANEVTFVSI 172 A AP VE ++ S CT C G+ T A EY A G A W Y P C CD D D L A + E P S+C+NA +W Y GVL ACG + D +DHCV +VGYN PE Y++VRNSWST WG DG+I LS N CG+ANE T + Sbjct: 53 AGAPQVELSTQQVAS--CTADPQLMCCDGCAGGDPTAAYEYLAWASRKGGLAPDAWWPYEQGLTPDEVCEAPACTKTCDKDDTDQLAARL-EASPLSVCLNAGAWDDYTGGVLSEAACGGHGADDVDHCVQLVGYNKTEPENSYWIVRNSWSTSWGEDGYIYLSMDGNACGVANEATLAVV 230
BLAST of NO04G04560 vs. NCBI_GenBank
Match: BAK00754.1 (predicted protein [Hordeum vulgare subsp. vulgare]) HSP 1 Score: 121.3 bits (303), Expect = 3.300e-24 Identity = 51/117 (43.59%), Postives = 72/117 (61.54%), Query Frame = 0 Query: 55 IAGWSYGTPPCDDACDAQDLDLLKANVAEYGPASICVNAESWGLYVEGVLMTEACGSYAYDSLDHCVNIVGYNDNAPEPYFVVRNSWSTLWGMDGHIRLSSRNNTCGLANEVTFVSI 172 I+G+ Y P C D+C QD + + + E P S+CV+AE W Y G++ + C S + LDHCV VGY+ +PY++VRNSW+T WG DG IRL+ NTCG+ + T+V I Sbjct: 226 ISGFGYAIPTCSDSCTNQDENSMAQYMQENSPLSVCVDAEPWQFYSSGIMTVDQCPS-DFSGLDHCVQAVGYDATGSQPYWIVRNSWNTNWGEDGFIRLALGTNTCGIGDVATYVKI 341
BLAST of NO04G04560 vs. NCBI_GenBank
Match: XP_009032801.1 (hypothetical protein AURANDRAFT_18666 [Aureococcus anophagefferens] >EGB13210.1 hypothetical protein AURANDRAFT_18666 [Aureococcus anophagefferens]) HSP 1 Score: 118.6 bits (296), Expect = 2.200e-23 Identity = 57/147 (38.78%), Postives = 81/147 (55.10%), Query Frame = 0 Query: 37 GNLTKAEEYEALTGFYVSIAGWSYGTPPCDDA-CDAQDLDLLKANVAEYGPASICVNAESWGLYVEGVLMTEACGSYAYDSLDHCVNIVGYNDNAPEP-----------YFVVRNSWSTLWGMDGHIRLSSRNNTCGLANEVTFVSI 172 GN + +++E G + +SY P C C+ QD D + A +A +GPASICVNA +W Y +GV+ CGS+A ++LDHCV +VGY + + VRNSW T WG G+IR+ N CG+AN+ TF + Sbjct: 202 GNTGRCKKFETAGG---DVESFSYVVPECKKGKCNDQDEDKMAAALASHGPASICVNAGAWQTYTKGVMTNLQCGSHAANALDHCVQVVGYTGYTGDAKACGKGLKDKCVWNVRNSWGTSWGYQGYIRVQMGKNACGIANDATFAKV 345
BLAST of NO04G04560 vs. NCBI_GenBank
Match: XP_009037507.1 (hypothetical protein AURANDRAFT_5846, partial [Aureococcus anophagefferens] >EGB07772.1 hypothetical protein AURANDRAFT_5846, partial [Aureococcus anophagefferens]) HSP 1 Score: 109.0 bits (271), Expect = 1.700e-20 Identity = 63/161 (39.13%), Postives = 80/161 (49.69%), Query Frame = 0 Query: 5 GLVSAAMAPYVESMY--EECLSPRCTEKCRNRQIGNLTKAEEYEALTGFYVSIAGWSYGTPPCDDACDAQDLDLLK-ANVAEYGPASICVNAESWGLYVEGVLMTEACGSYAYDSLDHCVNIVGYNDNAPEPYFVVRNSWSTLWGMDGHIRLSSRNNTCGL 163 GL AA PY +++ EECL P CT C D +LDL + A + PA++CVNA +W Y GVL +AC S AY +DHCV +VGY+ EPY++VRNSWST WG DG+IRL NTCG+ Sbjct: 85 GLSPAAYWPYTQALTPDEECLGPFCTNAC------------------------------------DMDLSELDLGELAKTIQATPAAVCVNAGAWDDYTGGVLRYDAC-SGAYADIDHCVQLVGYDATGEEPYWIVRNSWSTSWGEDGYIRLQMDANTCGV 208
BLAST of NO04G04560 vs. NCBI_GenBank
Match: XP_013762925.1 (cruzipain [Thecamonas trahens ATCC 50062] >KNC45942.1 cruzipain [Thecamonas trahens ATCC 50062]) HSP 1 Score: 105.5 bits (262), Expect = 1.900e-19 Identity = 52/117 (44.44%), Postives = 68/117 (58.12%), Query Frame = 0 Query: 55 IAGWSYGTPPCDDACDAQDLDLLKANVAEYGPASICVNAESWGLYVEGVLMTEACGSYAYDSLDHCVNIVGYNDNAPEPYFVVRNSWSTLWGMDGHIRLSSRNNTCGLANEVTFVSI 172 I G++Y T P ++ L AN+ GP SICV+A SW Y G+L S+ LDHCV I G+ + E Y+ VRNSW+T WGM G+I+L NTCGLA+E T V+I Sbjct: 222 IMGYNYATSP-----STKNETQLAANLMSTGPVSICVDASSWQTYTSGIL------SHCGKQLDHCVQITGWGTSGSEMYWWVRNSWATSWGMSGYIQLKFGQNTCGLADEATIVTI 327
BLAST of NO04G04560 vs. NCBI_GenBank
Match: XP_004363040.1 (hypothetical protein DFA_03437 [Cavenderia fasciculata] >EGG25189.1 hypothetical protein DFA_03437 [Cavenderia fasciculata]) HSP 1 Score: 104.0 bits (258), Expect = 5.500e-19 Identity = 49/100 (49.00%), Postives = 64/100 (64.00%), Query Frame = 0 Query: 77 LKANVAEYGPASICVNAESWGLYVEGVLMTEACGSYAYDSLDHCVNIVGYNDNAPE--PYFVVRNSWSTLWGMDGHIRLSSRNNTCGLANEVTFVSIAPE 175 L+ +A GP SICVNAE W Y G+ S D LDHCV IVGY+ +A PYF+VRNSW T WG+ G+I + + +N CG+ NEVT+VS+ P+ Sbjct: 236 LREAMAARGPLSICVNAEPWMSYQSGIF-----SSTCSDDLDHCVQIVGYDTDATSKTPYFIVRNSWGTDWGLLGYIYIQAGSNLCGITNEVTYVSVHPD 330
BLAST of NO04G04560 vs. NCBI_GenBank
Match: OLP78299.1 (Serine/threonine-protein kinasePKR2 [Symbiodinium microadriaticum]) HSP 1 Score: 102.1 bits (253), Expect = 2.100e-18 Identity = 52/136 (38.24%), Postives = 71/136 (52.21%), Query Frame = 0 Query: 45 YEALTGFYVSIAGWSYGTPPC-DDACDAQDLDLLKANVAEYGPASICVNAESWGLYVEGVLMTEACGSYAYDSLDHCVNIVGYNDNAPEPYFVVRNSWSTLWGMDGHIRLSS-RNNTCGLANEVTFVSIAPEEEEE 179 Y L+G Y ++ G+SY PC + +C+ Q VNA W Y GVL ACG DHCV VG+N AP+PY++VRNSW++ WGM G+I L NTCG+A++ T + + EE Sbjct: 1322 YMQLSGGYAAVTGYSYAVKPCTEGSCENQ------------------VNAGVWNDYTGGVLSAAACGPMGAAYQDHCVMAVGFNATAPKPYWIVRNSWASTWGMQGYIYLEMVAKNTCGVADDATIPEVKVDLSEE 1439 The following BLAST results are available for this feature:
BLAST of NO04G04560 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO04G04560 ID=NO04G04560|Name=NO04G04560|organism=Nannochloropsis oceanica|type=gene|length=1346bpback to top protein sequence of NO04G04560.1 >NO04G04560.1-protein ID=NO04G04560.1-protein|Name=NO04G04560.1|organism=Nannochloropsis oceanica|type=polypeptide|length=198bpback to top Synonyms
Publications
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