NO04G04510, NO04G04510 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO04G04510 vs. NCBI_GenBank
Match: EWM28838.1 (Trimeric LpxA [Nannochloropsis gaditana]) HSP 1 Score: 377.5 bits (968), Expect = 3.700e-101 Identity = 231/274 (84.31%), Postives = 244/274 (89.05%), Query Frame = 0 Query: 1 MSASVVSALGAAARAAGRAFENAGKLLEVTPYVEHLAPSTKVLSHAGKSPAIHETVFVAPSASIIGHVQVGKGSSVWYGATLRGDVHSITVGEQTTIGDRAIVHVAKLRGDAPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALAPGAVLTPGKTVPSGQLWAGVPAKFVRELTAEEIANIKREAVASFELATVHKAETTKDYLQVMEDEAAWKDKQQRSPDYWPRLKGDAIRDPAEIPGFGVPGRIFNHPLTTPLPEGSD 275 M+ ++SA GAAARAAGRAFEN KLLEV PYVEHLAPSTKVLS GK+PAIHET FVAPSASIIG+VQVGKG+SVWYGATLRGDV SITVGEQTTIGDRA+VHVAKL+GDAPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ALAPGAVLTPGKTVPSG LWAGVPAKFVRELTAEEIANIKREAVASFELATVHKAET+KDY+QV DE AW DK+QRSP+YWPRLK +DPAEIPGFGVPGRIFNHPLT PLPEGSD Sbjct: 1 MTGPILSAFGAAARAAGRAFENXXKLLEVAPYVEHLAPSTKVLSFGGKAPAIHETAFVAPSASIIGNVQVGKGASVWYGATLRGDVQSITVGEQTTIGDRAVVHVAKLKGDAPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDKAVVKSHAALAPGAVLTPGKTVPSGHLWAGVPAKFVRELTAEEIANIKREAVASFELATVHKAETSKDYVQVEADEEAWIDKKQRSPNYWPRLKDP--KDPAEIPGFGVPGRIFNHPLTVPLPEGSD 272
BLAST of NO04G04510 vs. NCBI_GenBank
Match: EJK68540.1 (hypothetical protein THAOC_10267 [Thalassiosira oceanica]) HSP 1 Score: 178.7 bits (452), Expect = 2.500e-41 Identity = 116/256 (45.31%), Postives = 158/256 (61.72%), Query Frame = 0 Query: 14 RAAGRAFENAGKLLEVTPYVEHLAPSTKVLSHAGKSPAIHE-TVFVAPSASIIGHVQVGKGSSVWYGATLRGDVHSITVGEQTTIGDRAIVHVAKLRGDAPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALAPGAVLTPGKTVPSGQLWAGVPAKFVRELTAEEIANIKREAVASFELATVHKAETTKDYLQVMEDEAAWKDKQQRSPDYWPRLKGDAIRDPAEIPGFGVPGRIFNHPLTTP 269 R G++ + G +EV Y + L PST+ ++ G +P + T FVAPSAS+IG V +GK SSVWYGAT+RGDVH +++GE T +GDRA++HVAK++GD P+ XXXXXXXXXXXXXXXXXXX TPG TV GQ W+G PAK VR+++AEE+A+ V + ELA +H ET+KD+ Q+ +DE A++D R P+YW ++ ++ G G PG IF+ LT P Sbjct: 3 RKVGQSLDGLGSSMEVCKYKDRLVPSTRFVAVDGVTPTVDPLTAFVAPSASVIGDVTLGKNSSVWYGATVRGDVHKVSIGENTCVGDRAVIHVAKIQGDFPSVXXXXXXXXXXXXXXXXXXXNSVVVGANAQVLDGSVVEQNSXXXXXXXXTPGTTVGEGQYWSGSPAKMVRKVSAEELASSAENTVETLELARMHHFETSKDHEQIQKDEEAYEDAMTRDPEYWQ--PDPNAKEEGDVLGQGSPGLIFDTVLTNP 256
BLAST of NO04G04510 vs. NCBI_GenBank
Match: GAX25879.1 (hypothetical protein FisN_6Hh083 [Fistulifera solaris]) HSP 1 Score: 169.1 bits (427), Expect = 2.000e-38 Identity = 120/275 (43.64%), Postives = 159/275 (57.82%), Query Frame = 0 Query: 1 MSASVVSA---LGAAARAAGRAFENAGKLLEVTPYVEHLAPSTKVLSHAGKSPAIHETVFVAPSASIIGHVQVGKGSSVWYGATLRGDVHSITVGEQTTIGDRAIVHVAKLRGDAPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALAPGAVLTPGKTVPSGQLWAGVPAKFVRELTAEEIANIKREAVASFELATVHKAETTKDYLQVMEDEAAWKDKQQRSPDYWPRLKGDAIRDPAEIPGFGVPGRIFNHPLTTPLPEG 273 MS+ V A L +A R G A + AGK +E+T Y E L PST+ ++ G P + FVAPSAS+IG+V +GKGSS+WYGAT+RGDV+ +T+G++T+IGDR++VHVAK++GD PT XXXXXXXXXXXXXXXX G +P+G+LWAG PAK VR LT E+++ + + LA H E KDY Q++E EA D + + PR I+D ++ G G PGRIF LT P G Sbjct: 1 MSSYVARASLGLASAMRKVGSALDGAGKGIEITKYTEKLVPSTRFVAVDGIGPTVSAECFVAPSASVIGNVSIGKGSSIWYGATIRGDVNEVTIGDRTSIGDRSVVHVAKIQGDFPTHIGSGVTIGPGALVHAATLKDGCVIXXXXXXXXXXXXXXXXXXXXXXXXXXGTKIPAGELWAGAPAKKVRALTEAELSSAAEAVLQTAILAQEHAIENAKDYKQILE-EAELADIAEHLDESSPR---KPIKDINDVLGQGPPGRIFRSTLTHPYEAG 271
BLAST of NO04G04510 vs. NCBI_GenBank
Match: OEU12936.1 (gamma carbonic anhydrase [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 166.8 bits (421), Expect = 9.900e-38 Identity = 135/269 (50.19%), Postives = 178/269 (66.17%), Query Frame = 0 Query: 1 MSASVVSALGAAARAAGRAFENAGKLLEVTPYVEHLAPSTKVLSHAGKSPAIH-ETVFVAPSASIIGHVQVGKGSSVWYGATLRGDVHSITVGEQTTIGDRAIVHVAKLRGDAPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALAPGAVLTPGKTVPSGQLWAGVPAKFVRELTAEEIANIKREAVASFELATVHKAETTKDYLQVMEDEAAWKDKQQRSPDYWPRLKGDAIRDPAEIPGFGVPGRIFNHPLTTP 269 MS+ + A AAR G A ++ G +EV Y E L PS++++S G SPA+ F+APSAS+IG+V +G+ SSVWYGAT+RGDV+++ +G +T++GDRA+VHVAK++GD PT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +LW+G PAK VR LTA+EIA+I A + ELA +H E +KDY Q++E++ D++ R ++ I DP ++ G GVPGRIFN LT P Sbjct: 4 MSSRIAVAASGAARKIGAALDSMGAGMEVAKYTERLVPSSRIVSVNGVSPALSGANNFIAPSASVIGNVTIGEHSSVWYGATVRGDVNTLKIGSKTSVGDRAVVHVAKIQGDHPTYIGDNVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELWSGSPAKKVRSLTADEIASISESAHDTLELAYLHAVENSKDYKQLIEEDEDRLDRKLRKKAWF----DPNIPDPDDVLGQGVPGRIFNSTLTNP 268
BLAST of NO04G04510 vs. NCBI_GenBank
Match: GAX21351.1 (hypothetical protein FisN_6Lh083 [Fistulifera solaris]) HSP 1 Score: 163.3 bits (412), Expect = 1.100e-36 Identity = 131/255 (51.37%), Postives = 166/255 (65.10%), Query Frame = 0 Query: 14 RAAGRAFENAGKLLEVTPYVEHLAPSTKVLSHAGKSPAIHETVFVAPSASIIGHVQVGKGSSVWYGATLRGDVHSITVGEQTTIGDRAIVHVAKLRGDAPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALAPGAVLTPGKTVPSGQLWAGVPAKFVRELTAEEIANIKREAVASFELATVHKAETTKDYLQVMEDEAAWKDKQQRSPDYWPRLKGDAIRDPAEIPGFGVPGRIFNHPLTTP 269 R G A + AGK +E+T Y E L PST+ ++ G P + FVAPSAS+IG+V +GKGSS+WYGAT+RGDV+ +T+G++T+IGDR++VHVAK++GD PT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +G+LWAGVPAK VR LT E+++ + + LA H E KDY Q+ME EA D + + PR I+D ++ G G PGRIF LT P Sbjct: 2 RKVGSALDGAGKGIEITKYTEKLVPSTRFVAVDGIGPTVSAECFVAPSASVIGNVSIGKGSSIWYGATIRGDVNEVTIGDRTSIGDRSVVHVAKIQGDFPTHIGNGVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGELWAGVPAKKVRALTEAELSSAAEAVLQTAMLAQEHAIENAKDYKQIME-EAELADIAEHLDESSPR---KPIKDINDVLGQGPPGRIFRSTLTHP 252
BLAST of NO04G04510 vs. NCBI_GenBank
Match: XP_002290563.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED92315.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 159.1 bits (401), Expect = 2.100e-35 Identity = 126/269 (46.84%), Postives = 168/269 (62.45%), Query Frame = 0 Query: 1 MSASVVSALGAAARAAGRAFENAGKLLEVTPYVEHLAPSTKVLSHAGKSPAIHE-TVFVAPSASIIGHVQVGKGSSVWYGATLRGDVHSITVGEQTTIGDRAIVHVAKLRGDAPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALAPGAVLTPGKTVPSGQLWAGVPAKFVRELTAEEIANIKREAVASFELATVHKAETTKDYLQVMEDEAAWKDKQQRSPDYWPRLKGDAIRDPAEIPGFGVPGRIFNHPLTTP 269 + A VV A AR G++ ++ G+ LEV Y E L PST+ ++ G SP + T FVAPSAS+IG V +GKG+SVWYGAT+RGDVH + +G+ T++GDRA++HVAK++GD P+XXXXXXXXXXXXXXXXXXXX XXXXXXXXXX LW+G PAK VR++TAEE+ N ++ ELA +H E K Q+ DE A++D R P+Y+ + G+ + ++ G G PG IF+ LT P Sbjct: 4 LGARVVLAASNTARKLGQSLDSLGQSLEVVKYTERLVPSTRFVAVDGVSPTVSPLTAFVAPSASVIGDVTLGKGASVWYGATVRGDVHKVVIGDNTSVGDRAVIHVAKIQGDFPSXXXXXXXXXXXXXXXXXXXXDNCVVGPMAQVXXXXXXXXXXXXXXXXXXXXXXXXXXXXLWSGSPAKMVRKVTAEELQNASENSMDVLELARMHAFECDKTLEQLTNDEEAYEDATTRDPEYY-QPTGEV--EEGDVLGQGSPGLIFDSVLTNP 269
BLAST of NO04G04510 vs. NCBI_GenBank
Match: CBN79571.1 (gamma carbonic anhydrase [Ectocarpus siliculosus]) HSP 1 Score: 151.8 bits (382), Expect = 3.300e-33 Identity = 109/264 (41.29%), Postives = 152/264 (57.58%), Query Frame = 0 Query: 7 SALGAAARAAGRAFENAGKLLEVTPYVEHLAPSTKVLSHAGKSPAIHETVFVAPSASIIGHVQVGKGSSVWYGATLRGDVHSITVGEQTTIGDRAIVHVAKLRGDAPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALAPGAVLTPGKTVPSGQLWAGVPAKFVRELTAEEIANIKREAVASFELATVHKAETTKDYLQVMEDEAAWKDKQQRSPDYWPRL--KGDAIRDPAEIPGFGVPGRIFNHPLTTP 269 +A+G AAR GR+ + G LE PY E L ST+ + H GK P+ + FVAP+AS+IG V+VG+G+S+WYG+ +RGDV+ + +G +++GD A+VHVA L G+ PT XXXXXXXXXXXXXXXXXXX +GQLWAG PA +VR+++ E A+I A + L+ H +E K L++ DE W +K R P Y ++ +GD ++ G GVPGR+FN L +P Sbjct: 7 TAVGMAARRVGRSLDGMGAALETHPYTEKLLASTRSVGHKGKVPSTAQASFVAPNASVIGDVKVGEGASLWYGSVVRGDVNHVVIGAGSSVGDSAVVHVAGLAGNKPTIVGNNVVIGPRATIHACTLKDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGQLWAGTPAVYVRDISELEAASIVTTAAETQALSLAHASECEKGPLEIELDERKWDEKASRDPTYVFQVPEEGDDNLAYNDVEGQGVPGRVFNTNLRSP 270
BLAST of NO04G04510 vs. NCBI_GenBank
Match: PRW57618.1 (gamma carbonic anhydrase mitochondrial [Chlorella sorokiniana]) HSP 1 Score: 146.0 bits (367), Expect = 1.800e-31 Identity = 87/232 (37.50%), Postives = 125/232 (53.88%), Query Frame = 0 Query: 8 ALGAAARAAGRAFENAGKLLEVTPYVEHLAPSTKVLSHAGKSPAIHETVFVAPSASIIGHVQVGKGSSVWYGATLRGDVHSITVGEQTTIGDRAIVHVAK--LRGDA-PTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALAPGAVLTPGKTVPSGQLWAGVPAKFVRELTAEEIANIKREAVASFELATVHKAETTKDYLQVMEDEAAWKDKQQRSPDY 237 A+GA AR G+ F+ G L Y E L + V + AGK P + + VFVAP+AS+IG V++G GSSVWYGA +RGDV+S+++G++T++ D ++HVAK G A PT +A GA++ PG T+PSGQ+WAG PAKF+R L +E A + A + +LA +H E K + +V D+A D+ +R PDY Sbjct: 4 AVGAIARGLGKVFDGLGSSLGF-GYRETLNKAQCVQAFAGKQPVLGDDVFVAPNASVIGDVKLGSGSSVWYGAVIRGDVNSVSIGDKTSVQDNVLIHVAKHNAAGQALPTVIGSRVTIGPGATVHAATIEDCVVIGMGATIMDGVKVESRTVVAAGALVPPGTTIPSGQVWAGSPAKFIRNLVEDEAAFVAESADTTAQLAALHAEENAKSFDEVEADKARRADRLERDPDY 234
BLAST of NO04G04510 vs. NCBI_GenBank
Match: XP_013667414.1 (gamma carbonic anhydrase 2, mitochondrial-like [Brassica napus]) HSP 1 Score: 139.4 bits (350), Expect = 1.700e-29 Identity = 95/270 (35.19%), Postives = 138/270 (51.11%), Query Frame = 0 Query: 5 VVSALGAAARAAGRAFENAGKLLEVTPYV-EHLAPSTKVLSHAGKSPAIHETVFVAPSASIIGHVQVGKGSSVWYGATLRGDVHSITVGEQTTIGDRAIVHVAK--LRGDA-PTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALAPGAVLTPGKTVPSGQLWAGVPAKFVRELTAEEIANIKREAVASFELATVHKAETTKDYLQVMEDEAAWKDKQQRSPDYWPRLKGDAIRDPAEIPGFGVPGRIFNHPLTTPLP 271 V+ +G R +G+A + G LL+ + + EHL+ ++S KSP + + VFVAPSAS+IG VQ+GKGSS+WYG LRGDV++I+VG T I D ++VHVAK L G PT +A G+++ VPSG++W G PAKF+R+LT EEIA I + A LA +H AE +K + ++ E E A + K R + + + G PAE+ +P + TT +P Sbjct: 7 VIYTVGNWIRGSGQALDRVGSLLQGSHRLEEHLSRHRTLMSVFDKSPLVDKDVFVAPSASVIGDVQIGKGSSIWYGCVLRGDVNNISVGSGTNIQDNSLVHVAKTNLAGKVLPTTIGDNVTVGHSAVIHGCTVEDEAFVGMGATLLDGVVVEKHAMVAAGSLVRENTRVPSGEVWGGNPAKFMRKLTDEEIAYISKSAENYINLAHIHAAENSKSFEEI-EVERALRKKYARKDEDYDSMLGIVRETPAELI---LPDNVLPEKTTTRVP 272
BLAST of NO04G04510 vs. NCBI_GenBank
Match: XP_013599787.1 (PREDICTED: gamma carbonic anhydrase 2, mitochondrial [Brassica oleracea var. oleracea] >XP_013701939.1 gamma carbonic anhydrase 2, mitochondrial [Brassica napus] >CDY47592.1 BnaC08g04620D [Brassica napus]) HSP 1 Score: 138.3 bits (347), Expect = 3.800e-29 Identity = 93/270 (34.44%), Postives = 138/270 (51.11%), Query Frame = 0 Query: 5 VVSALGAAARAAGRAFENAGKLLEVTPYV-EHLAPSTKVLSHAGKSPAIHETVFVAPSASIIGHVQVGKGSSVWYGATLRGDVHSITVGEQTTIGDRAIVHVAK--LRGDA-PTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALAPGAVLTPGKTVPSGQLWAGVPAKFVRELTAEEIANIKREAVASFELATVHKAETTKDYLQVMEDEAAWKDKQQRSPDYWPRLKGDAIRDPAEIPGFGVPGRIFNHPLTTPLP 271 V+ +G R +G+A + G +L+ + + EHL+ ++S KSP + + VFVAPSAS+IG VQ+GKGSS+WYG LRGDV++I+VG T I D ++VHVAK L G PT +A G+++ +PSG++W G PAKF+R+LT EEIA I + A LA +H AE +K + ++ E E A + K R + + + G PAE+ +P + TT +P Sbjct: 7 VIYTVGNWIRGSGQALDRVGSILQGSHRLEEHLSRHRTLMSVFDKSPLVDKDVFVAPSASVIGDVQIGKGSSIWYGCVLRGDVNNISVGSGTNIQDNSLVHVAKTNLSGKVLPTTIGDNVTVGHSAVIHGCTVEDEAFVGMGATLLDGVVVEKHAMVAAGSLVRENTRIPSGEVWGGNPAKFMRKLTDEEIAYISKSAENYINLAHIHAAENSKSFEEI-EVERALRKKYARKDEDYDSMLGIVRETPAELI---LPDNVLPEKTTTRVP 272 The following BLAST results are available for this feature:
BLAST of NO04G04510 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO04G04510 ID=NO04G04510|Name=NO04G04510|organism=Nannochloropsis oceanica|type=gene|length=855bpback to top protein sequence of NO04G04510.1 >NO04G04510.1-protein ID=NO04G04510.1-protein|Name=NO04G04510.1|organism=Nannochloropsis oceanica|type=polypeptide|length=285bpback to top Synonyms
Publications
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