NO04G04310, NO04G04310 (gene) Nannochloropsis oceanica

Overview
NameNO04G04310
Unique NameNO04G04310
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3096
Alignment locationchr4:1164290..1167385 -

Link to JBrowse

Properties
Property NameValue
DescriptionMembrane protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr4genomechr4:1164290..1167385 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
BLAST of NO04G04310 vs. NCBI_GenBank
Match: EWM28776.1 (membrane protein [Nannochloropsis gaditana])

HSP 1 Score: 639.0 bits (1647), Expect = 1.100e-179
Identity = 315/397 (79.35%), Postives = 334/397 (84.13%), Query Frame = 0
Query:    1 MAPNAELTRRQRPASNHPIKPSVAGMEKSSRSSSSXXXXXXXXQQGISHLSQEAAKVKLIRDAIRAEDKRLRAAYPFPLGEHWQSAVGLFIYVAAWAAWGLATHAWWHGSLSMPALMVINALAISLLHEMEHDLIHELYFKRSPWVQHVMFAGIWLIKSNASPWWRKYYHLRHHQYSGQVNDVEERLIGLGLPWYSPKRLLVTLTPAGTLLVANDIARDDPEFSRFNLVLCNSPVIVLSTAAMLVHLVASLGGGEALVRAGLLSEGMFAMLSHRLLPALFLYNATVNFPNVLRQSCLVIISTYCHYYGDIPERDVFFQTQILDHPFLWPLQLFCFNFGATHIIHHFVTRQPFYLRQVVAFGVLPLMKAQGCRHNDMSNNFRGNRWAGGEDAVDHEEE 398
            M PNAEL +RQ P S    K  +    +   ++ S          GISHLSQEA KVK IRDAIRAEDKRLRAAYPFPLGEHWQS VGL IYV +W  WG+AT+AWW G LS+P LMV+NALAISLLHEMEHDLIHELYFKR PWVQHVMF GIWLIKSNASPWWRKYYHLRHHQYSGQVNDVEERLIGLGL W+SPKRLLVTLTPAGTLLVANDIARDDPEFSR NLVL NSPVIVLSTAAMLVHL+ + GG  ALV+AG+LS  + A LS R+LPALFLYNA VNFPNVLRQSCLVIISTYCHYYGDIPERDVFFQTQILDHP LWP QLFCFNFGATHIIHHFVTRQPFYLRQV AF VLP+MKA GCRHNDM NNFRGNRW GGE AVD + E
Sbjct:    1 MTPNAELKQRQLPESQKTTKSKLLDPARKGATTVS-SVKRSASPTGISHLSQEAGKVKTIRDAIRAEDKRLRAAYPFPLGEHWQSVVGLAIYVGSWVVWGIATYAWWTGGLSLPVLMVVNALAISLLHEMEHDLIHELYFKRQPWVQHVMFMGIWLIKSNASPWWRKYYHLRHHQYSGQVNDVEERLIGLGLRWWSPKRLLVTLTPAGTLLVANDIARDDPEFSRVNLVLSNSPVIVLSTAAMLVHLICASGGDAALVKAGVLSVPLHAFLSQRILPALFLYNAAVNFPNVLRQSCLVIISTYCHYYGDIPERDVFFQTQILDHPLLWPFQLFCFNFGATHIIHHFVTRQPFYLRQVTAFRVLPIMKALGCRHNDMGNNFRGNRWVGGEKAVDGKGE 396          
BLAST of NO04G04310 vs. NCBI_GenBank
Match: EWM30156.1 (fatty acid desaturase domain protein [Nannochloropsis gaditana])

HSP 1 Score: 495.7 bits (1275), Expect = 1.500e-136
Identity = 241/354 (68.08%), Postives = 280/354 (79.10%), Query Frame = 0
Query:   32 SSSSXXXXXXXXQQGISHLSQEAAKVKLIRDAIRAEDKRLRAAYPFPLGEHWQSAVGLFIYVAAWAAWGLATHAWWHGSLSMPALMVINALAISLLHEMEHDLIHELYFKRSPWVQHVMFAGIWLIKSNASPWWRKYYHLRHHQYSGQVNDVEERLIGLGLPWYSPKRLLVTLTPAGTLLVANDIARDDPEFSRFNLVLCNSPVIVLSTAAMLVHLVASLGGGEALVRAGLLSEGMFAMLSHRLLPALFLYNATVNFPNVLRQSCLVIISTYCHYYGDIPERDVFFQTQILDHPFLWPLQLFCFNFGATHIIHHFVTRQPFYLRQVVAFGVLPLMKAQGCRHNDMSNNFRGNRW 386
            SSS+           ISHLSQEAAKVK+IR+AIRAEDKRLRA Y F L E WQ  +G  IY+ A  +W   +++W+ G ++ P  +V NALAISLLHEMEHDLIH+LYFKR  WVQ+ MFA IW+IKSNA+PWWR+YYHLRHHQY+GQV DVEERLIGLGLPWYS KR+LVT TPA TLL+ANDIA+DDPEFS+  LV  N+PVI  ST AM++HL+  LG GEALV  G+     +A L   +LP + +YN TVN PNVLRQSCLVIISTYCHYYGDIPERDVFFQTQ+L+HP LWP QLFCFNFGATHIIHHFVTRQPFYLRQ+ AF V P++  QGCRHND+ N+FR NRW
Sbjct:  104 SSSATATGDIPRTASISHLSQEAAKVKIIREAIRAEDKRLRARY-FFLREEWQDTIGTVIYLTAALSWAAISYSWYCGLIATPVTIVGNALAISLLHEMEHDLIHDLYFKRVKWVQNAMFAFIWVIKSNANPWWRRYYHLRHHQYAGQVVDVEERLIGLGLPWYSWKRILVTFTPAATLLIANDIAKDDPEFSKKVLVRYNAPVIAFSTVAMVLHLLYYLGVGEALVSVGIFPPAFYAFLLRVVLPFVVVYNGTVNLPNVLRQSCLVIISTYCHYYGDIPERDVFFQTQVLNHPVLWPFQLFCFNFGATHIIHHFVTRQPFYLRQLTAFKVTPILLEQGCRHNDLGNHFRANRW 456          
BLAST of NO04G04310 vs. NCBI_GenBank
Match: WP_075091605.1 (hypothetical protein [Planctomyces sp. SH-PL14] >AMV16820.1 Fatty acid desaturase [Planctomyces sp. SH-PL14])

HSP 1 Score: 262.7 bits (670), Expect = 2.100e-66
Identity = 149/334 (44.61%), Postives = 200/334 (59.88%), Query Frame = 0
Query:   52 QEAAKVKLIRDAIRAEDKRLRAAYPFPLGEHWQSAVGLFIYVAAWAAWGLATHAWWHGSLSMPALMVINALAISLLHEMEHDLIHELYFKRSPWVQHVMFAGIWLIKSNASPWWRKYYHLRHHQYSGQVNDVEERLIGLGLPWYSPKRLLVTLTPAGTLLVANDIARDDPEFSRFNLVLCNSPVIVLSTAAMLVHLVASLGGGEALVRAGLLSEGMFAMLSHRLLPALFLYNATVNFPNVLRQSCLVIISTYCHYYGDIPERDVFFQTQILDHPFLWPLQLFCFNFGATHIIHHFVTRQPFYLRQVVAFGVLPLMKAQGCRHNDMSNNFRGNRW 386
            + +A+ K IR AI  E+KRLRA YP       Q+ +G+F ++ +    G+    + +G L     + + AL +S+LHE+EHDLIH+LYF+ SP  Q+ MF  IW+ K + +PW+R+  HLRHHQ SGQV D+EERLIG+GLP +  +RLLV + P   LL+  +I +D P+F    L L + P     T    + +  S  G   L      S      L     P +      +  PNVLRQ  LV++S+Y HYY DIP+RDVF+Q QIL+   + PLQLFCFNFGATHIIHH+V RQPFYLRQ+VA      M  QG R+ND+    R NRW
Sbjct:    4 ESSAQTKAIRTAIVLEEKRLRAKYPILAR---QNLLGMFCFLGSLGVMGIVAALYLNGVLPWWGAIPLMALPLSILHELEHDLIHDLYFRHSPLAQNGMFFVIWMAKLSLNPWYRREIHLRHHQESGQVTDIEERLIGIGLP-FGLRRLLVAIHPMAGLLLFREIKKDVPDFQPMRLSLMSVP-----TYLSFLVIWESFFGYWRLQNGWAPSFDFAHFLPPEGYPVMRDLAVLLVLPNVLRQCSLVLMSSYSHYYEDIPDRDVFYQNQILNCWLVAPLQLFCFNFGATHIIHHYVVRQPFYLRQMVACAAHKEMLQQGTRNNDLGTIARSNRW 328          
BLAST of NO04G04310 vs. NCBI_GenBank
Match: XP_002673653.1 (predicted protein [Naegleria gruberi] >EFC40909.1 predicted protein [Naegleria gruberi])

HSP 1 Score: 243.8 bits (621), Expect = 9.900e-61
Identity = 142/349 (40.69%), Postives = 203/349 (58.17%), Query Frame = 0
Query:   49 HLSQEAAKVKLIRDAIRAEDKRLRAAYPFPLGEHWQSAVGLFIY-VAAWAAWGLATHAWWHGSLSMPALMVINALAISLLHEMEHDLIHELYFKRSPWVQHVMFAGIWLIKSNASPWWRKYYHLRHHQYSGQVNDVEERLIGLGLPWYSPKRLLVTLTPAGTLLVANDIARDDPE-FSRFNLVLCNSPVIVLSTAAMLVHLVASLGGGEALVRAGLLSEGMFAMLSHRLLPALFL----------YNATVNFPNVLRQSCLVIISTYCHYYGDIPERDVFFQTQILDHPFLWPLQLFCFNFGATHIIHHFVTRQPFYLRQVVAFGVLPLMKAQGCRHNDMSNNFRGNRW 386
            H       VK IR+ I+ E+ RLR  Y F     +Q A+GL I+ V   +  G+AT  +  G L    ++ + AL  S+LHE+EHDLIH LYFK + WV HVM+  I+L K + +PW+RK+ HLRHHQ SG   D+EERLIG GLP +   R  + +TP    ++  D+ +D+ + ++R+ LV  ++P +V  + A++ HL  S                MF +      PAL+L              +  PN+LRQSCL ++++YCHYY D+P  DVF+Q Q+++H  + P QLFCFNFGATHIIHHFV  QPFY+R++++      M  QG R+ND     R NR+
Sbjct:   63 HEKDTTLAVKSIRNTIKNEEARLRRKYKF---LQYQDALGLLIFLVGVTSMIGVAT-LYLQGRLHWALVVPLLALPASILHELEHDLIHNLYFKTNQWVHHVMYFFIYLAKCSVTPWYRKFIHLRHHQVSGSKADLEERLIGGGLP-FGFLRWALIITPWANTMIIEDVQKDNMDNWNRWGLVFTSAPSVV--SFAIVWHLFFS------------YIRSMFGLTFTEYDPALYLPLWAWPIVRDLGVLIILPNILRQSCLNLMASYCHYYADVPAGDVFYQGQVINHWTMIPFQLFCFNFGATHIIHHFVPNQPFYIREIISRKANAEMIRQGVRNNDWGIVARANRF 392          
BLAST of NO04G04310 vs. NCBI_GenBank
Match: WP_093515684.1 (hypothetical protein [Stigmatella erecta] >SES98439.1 Fatty acid desaturase [Stigmatella erecta])

HSP 1 Score: 235.0 bits (598), Expect = 4.600e-58
Identity = 144/333 (43.24%), Postives = 194/333 (58.26%), Query Frame = 0
Query:   55 AKVKLIRDAIRAEDKRLRAAYPFPLGEHWQSAVGLFIYVAAWAAWGLATHAWWHGS--LSMPALMVINALAISLLHEMEHDLIHELYFKRSPWVQHVMFAGIWLIKSNASPWWRKYYHLRHHQYSGQVNDVEERLIGLGLPWYSPKRLLVTLTPAGTLLVANDIARDDPEFSRFNLVLCNSPVIVLSTAAMLVHLVASLGGGEALVRAGLLSEGMFAMLSHRLLPALFLYNATVNFPNVLRQSCLVIISTYCHYYGDIPERDVFFQTQILDHPFLWPLQLFCFNFGATHIIHHFVTRQPFYLRQVVAFGVLPLMKAQGCRHNDMSNNFRGNRW 386
            A+   I  AIR E+ RLR  + +     +QS  GL   +A+ AA  LA  A  HGS  L+    + + AL +S+LHE+EHDLIH LYF+  PW+Q+++    W+ K   +PW ++  HL HH+ SGQ  DVEER++GLG       RL++  +P G+ L+  DI +D P F    ++    P  + +   +L+ L   L G  ++   G L  G +  +S     A+ L+      PN+LRQ+CL +IS+Y HYY DIP  DVFFQ QIL HP +WPL LF FNFG THIIHHFV  QPFYLRQ+V+      MK QG R ND S   R NRW
Sbjct:   16 ARAHSITYAIRKEEHRLRMRHAW---LQYQSQAGLVFLLASLAA--LAGIASLHGSGHLAGWLALPLMALPLSVLHELEHDLIHHLYFRHQPWLQNLLLGVTWVCKLGMNPWTQRELHLHHHKVSGQREDVEERMLGLGTRSLF-LRLVLAASPLGSTLLLLDIRKDAPGFPSKQILAGLLPTRLFADLLLLLALAYGLTG--SIHPGGPLPAGGWPWVS----GAVTLW----VLPNLLRQACLTLISSYSHYYEDIPPGDVFFQNQILHHPLVWPLNLFTFNFGKTHIIHHFVANQPFYLRQMVSSVAFEEMKKQGARINDFSVISRANRW 332          
BLAST of NO04G04310 vs. NCBI_GenBank
Match: CCD27742.1 (predicted fatty acid desaturase [Stigmatella aurantiaca Sg a15])

HSP 1 Score: 233.8 bits (595), Expect = 1.000e-57
Identity = 139/336 (41.37%), Postives = 190/336 (56.55%), Query Frame = 0
Query:   55 AKVKLIRDAIRAEDKRLRAAYPFPLGEHWQSAVGLFIYVAAWAAWGLATHAWWHGSLSMPALMVINALAISLLHEMEHDLIHELYFKRSPWVQHVMFAGIWLIKSNASPWWRKYYHLRHHQYSGQVNDVEERLIGLGLPWYSPKRLLVTLTPAGTLLVANDIARDDPEFSRFNLVLCNSPVIVLSTAAMLVHLVASLGGGEALVRAGLLSEGMFAMLSHRLLPAL---FLYNATVNF--PNVLRQSCLVIISTYCHYYGDIPERDVFFQTQILDHPFLWPLQLFCFNFGATHIIHHFVTRQPFYLRQVVAFGVLPLMKAQGCRHNDMSNNFRGNRW 386
            A+   I  AIR E+ RLR  + +     +QS +GL   +A+ A   L    +  G L+    + + AL +S++HE+EHDLIH LYF+  PW+Q+++    WL K   +PW R+  HL HH+ SGQ  D+EER++GLG       RLL+  +P  + L+  DI R  P      ++    P +V+S   + + L+  + GG     A    EG        +LPA    ++  A   +  PN LRQ+CL +IS+Y HYY DIP+ DVFFQ QIL HP +WPL LF FNFG THIIHHFV  QPFYLRQ+V+   L  +K QG R ND     R NRW
Sbjct:   16 ARTHSINYAIRKEEHRLRMRHAW---LQYQSQMGLGFLLASVATMALIASLYSRGYLAGWLALPLMALPLSIVHEIEHDLIHHLYFRHQPWLQNLLLGVTWLCKLGMNPWTRRELHLHHHKVSGQQEDIEERMMGLGTRSLL-LRLLLAASPLASALLLLDIRRSAPGVQPRKILAGLLPSLVVSDVFLALALIYLMQGGPPPAGA----EG--------VLPAWGWPWVQGAVTLWVLPNALRQTCLALISSYSHYYEDIPQGDVFFQNQILHHPLMWPLNLFAFNFGKTHIIHHFVANQPFYLRQLVSPVALEELKRQGARINDFGVISRANRW 335          
BLAST of NO04G04310 vs. NCBI_GenBank
Match: XP_002672343.1 (fatty acid desaturase domain protein [Naegleria gruberi] >EFC39599.1 fatty acid desaturase domain protein [Naegleria gruberi])

HSP 1 Score: 233.4 bits (594), Expect = 1.300e-57
Identity = 139/334 (41.62%), Postives = 191/334 (57.19%), Query Frame = 0
Query:   57 VKLIRDAIRAEDKRLRAAYPFPLGEHWQSAVGLFIYVAAWAAWGLATHAWWHGSLSMPALMVINALAISLLHEMEHDLIHELYFKRSPWVQHVMFAGIWLIKSNASPWWRKYYHLRHHQYSGQVNDVEERLIGLGLPWYSPKRLLVTLTPAGTLLVANDIARDDP-EFSRFNLVLCNSPVIVLSTAAMLVHLVASLGGGEALVRAGLLSEGMFAMLSHRL----LPALFLYNATVNFPNVLRQSCLVIISTYCHYYGDIPERDVFFQTQILDHPFLWPLQLFCFNFGATHIIHHFVTRQPFYLRQVVAFGVLPLMKAQGCRHNDMSNNFRGNRW 386
            VK IR+ I+ E+ RLR  + F     +Q  +GL I++ +       +  +  G+L     + + AL IS+LHE+EHDLIH LYFK   WVQHVM+  I+L K +A PW+RKY HLRHH  SG   D EER IG GL      R L+T +P    L   D+ RD+P +FS F  +L N+P ++  T    V              A L   G F  LS  L     P +   +  +  PN++RQ+CL ++++YCHYYGD+PE DVF+Q Q++DH  + P QLF FNFG++HIIHHFV  QPFY+R+ ++      M  QG R+ND     R NR+
Sbjct:   87 VKSIRNTIKNEEARLRKRHSF---LQYQDLLGLTIFLTSLLTIVGVSALYLKGNLHWALAVPLLALPISVLHELEHDLIHNLYFKTHQWVQHVMYFFIYLAKCHALPWYRKYVHLRHHVTSGSKRDFEERAIGGGLE-AGFLRYLLTTSPWAVFLAITDVKRDNPQDFSVFLALLTNAPSMIGFTVLWFV------------FTAYLFMFGGFTFLSTYLPIAFWPLVRDLSVIIVLPNLVRQTCLNLMASYCHYYGDVPEGDVFYQGQVIDHWSMIPFQLFSFNFGSSHIIHHFVPNQPFYIREAISRKANAEMIKQGVRNNDWGIVARANRF 404          
BLAST of NO04G04310 vs. NCBI_GenBank
Match: WP_083423331.1 (hypothetical protein [Stigmatella aurantiaca] >SEM13986.1 Fatty acid desaturase [Stigmatella aurantiaca])

HSP 1 Score: 231.9 bits (590), Expect = 3.900e-57
Identity = 137/331 (41.39%), Postives = 190/331 (57.40%), Query Frame = 0
Query:   55 AKVKLIRDAIRAEDKRLRAAYPFPLGEHWQSAVGLFIYVAAWAAWGLATHAWWHGSLSMPALMVINALAISLLHEMEHDLIHELYFKRSPWVQHVMFAGIWLIKSNASPWWRKYYHLRHHQYSGQVNDVEERLIGLGLPWYSPKRLLVTLTPAGTLLVANDIARDDPEFSRFNLVLCNSPVIVLSTAAMLVHLVASLGGGEALVRAGLLSEGMFAMLSHRLLPALFLYNATVNFPNVLRQSCLVIISTYCHYYGDIPERDVFFQTQILDHPFLWPLQLFCFNFGATHIIHHFVTRQPFYLRQVVAFGVLPLMKAQGCRHNDMSNNFRGNRW 386
            A+   I  AIR E+ RLR  + +     +QS  GL   +A+ AA  L    +  G L+    + + AL +S++HE+EHDLIH LYF+  PW+Q+++    W+ K   +PW ++  HL HH+ SGQ  DVEER++GLG       RL++  +P G+ L+   I +D P F    ++    P  + +   +L+ L   L G  ++   G L    +  +S     A+ L+      PN+LRQ+CL +IS+Y HYY DIP+ DVFFQ QIL HP +WPL LF FNFG THIIHHFV  QPFYLRQ+VA      +K QG R ND S   R NRW
Sbjct:   16 ARAHSITYAIRKEEHRLRMRHAW---LQYQSQAGLVFLLASLAALALIASLYARGHLAGWLALPLMALPLSVIHELEHDLIHHLYFRHQPWLQNLLLGVTWVCKLGMNPWTQRELHLHHHKVSGQREDVEERMLGLGTRSLF-LRLVLATSPLGSTLLLLGIRKDAPGFPPRQILAGLLPTRLFADLLLLLALAYGLTG--SMHPGGPLPAWGWPWVS----GAVTLW----VLPNLLRQACLTLISSYSHYYEDIPQGDVFFQNQILHHPLVWPLNLFTFNFGKTHIIHHFVANQPFYLRQMVASVAFEELKKQGARINDFSVISRANRW 332          
BLAST of NO04G04310 vs. NCBI_GenBank
Match: WP_002616070.1 (fatty acid desaturase domain protein [Stigmatella aurantiaca] >EAU64808.1 fatty acid desaturase domain protein [Stigmatella aurantiaca DW4/3-1])

HSP 1 Score: 230.3 bits (586), Expect = 1.100e-56
Identity = 133/331 (40.18%), Postives = 190/331 (57.40%), Query Frame = 0
Query:   55 AKVKLIRDAIRAEDKRLRAAYPFPLGEHWQSAVGLFIYVAAWAAWGLATHAWWHGSLSMPALMVINALAISLLHEMEHDLIHELYFKRSPWVQHVMFAGIWLIKSNASPWWRKYYHLRHHQYSGQVNDVEERLIGLGLPWYSPKRLLVTLTPAGTLLVANDIARDDPEFSRFNLVLCNSPVIVLSTAAMLVHLVASLGGGEALVRAGLLSEGMFAMLSHRLLPALFLYNATVNFPNVLRQSCLVIISTYCHYYGDIPERDVFFQTQILDHPFLWPLQLFCFNFGATHIIHHFVTRQPFYLRQVVAFGVLPLMKAQGCRHNDMSNNFRGNRW 386
            A+   I  AIR E+ RLR  + +     +QS +GL   +A+ AA  L    +  G L+    + + AL +S+++E+EHDL+H LYF+   W Q+++    WL K   +PW R+ +HL HH+ SGQ  D+EER++GLG       RL++T +P  + L+  DI RD P F    +++   P ++++   +++ L+ +       V +GL  +     L     P +         PN LRQ CL +IS+Y HYY DIP+ DVFFQ QIL HP +WPL LF FNFG THIIHHFV  QPFYLRQ+V+   L  +K QG R ND +   R NRW
Sbjct:   16 ARTHSINYAIRKEEHRLRMRHSW---LQYQSQMGLGFLLASLAAMALIASLYLRGHLAWWLTVPLMALPLSIVYEIEHDLLHHLYFRNHLWFQNLLLGVTWLCKLGMNPWTRREFHLHHHKVSGQREDIEERIMGLGTRSLL-LRLVLTASPLSSTLLLLDIRRDVPGFQPRKILVGLLPSLLIADLLLVLALLYT-------VPSGLSPDTGSGWLPVWGWPWVRGALTLWVLPNALRQGCLALISSYSHYYEDIPQGDVFFQNQILHHPLVWPLNLFAFNFGKTHIIHHFVANQPFYLRQMVSSVALEELKKQGARINDFAVISRANRW 335          
BLAST of NO04G04310 vs. NCBI_GenBank
Match: OAI41450.1 (hypothetical protein AYO40_03060 [Planctomycetaceae bacterium SCGC AG-212-D15])

HSP 1 Score: 227.3 bits (578), Expect = 9.600e-56
Identity = 132/334 (39.52%), Postives = 191/334 (57.19%), Query Frame = 0
Query:   56 KVKLIRDAIRAEDKRLRAAYPFPLGEHWQSAVGLFIYVAAWAAWGLATHAWWHGSLSMPALMVINALAISLLHEMEHDLIHELYFKRSPWVQHVMFAGIWLIKSNASPWWRKYYHLRHHQYSGQVNDVEERLIGLGLPWYSPKRLLVTLTPAGTLLVANDIARDDPEFSRFNLVLCNSPV---IVLSTAAMLVHLVASLGGGEALVRAGLLSEGMFAMLSHRLLPALFLYNATVNFPNVLRQSCLVIISTYCHYYGDIPERDVFFQTQILDHPFLWPLQLFCFNFGATHIIHHFVTRQPFYLRQVVAFGVLPLMKAQGCRHNDMSNNFRGNRWA 387
            + + IR AIR E++RLR  Y +     +Q  +GL  +V + AA  L    +    L+    + I A+ +S+LHE+E     + YF+R  W+Q+VMF  IW++K   +PW R+  HLRHH+ SG   D+EERLIGLG+P +   R+ V L P G+L + + I R+ P+F    + L + P     +L T   L++ +  L G              F++L     P +   +  +  PN LRQ CLV++STY HYY DIP  +V++Q QIL   + WPLQ+FC NFG+THIIHH+V  QPFYLRQ+VA     +M  +G R ND+    R NRW+
Sbjct:   11 RARAIRAAIREEEERLRQRYRWLA---YQDLLGLVCFVGSLAALILVAGFYLRARLAGWMAIPILAIILSVLHELEXXXXXDQYFRRRRWLQNVMFFVIWVLKQGFNPWVRRGLHLRHHRQSGLKTDIEERLIGLGVP-FGFTRIFVALHPLGSLFLFDRIKRESPDFKPLRVFLLSLPTYGPFLLLTYVALLYAIPGLFGAP------------FSILPEWGWPLIRDLSILLLLPNTLRQFCLVLMSTYSHYYEDIP-NEVYYQNQILRAWYFWPLQVFCCNFGSTHIIHHYVINQPFYLRQMVARAAHAVMAREGVRVNDLGTVARANRWS 327          
The following BLAST results are available for this feature:
BLAST of NO04G04310 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM28776.11.100e-17979.35membrane protein [Nannochloropsis gaditana][more]
EWM30156.11.500e-13668.08fatty acid desaturase domain protein [Nannochlorop... [more]
WP_075091605.12.100e-6644.61hypothetical protein [Planctomyces sp. SH-PL14] >A... [more]
XP_002673653.19.900e-6140.69predicted protein [Naegleria gruberi] >EFC40909.1 ... [more]
WP_093515684.14.600e-5843.24hypothetical protein [Stigmatella erecta] >SES9843... [more]
CCD27742.11.000e-5741.37predicted fatty acid desaturase [Stigmatella auran... [more]
XP_002672343.11.300e-5741.62fatty acid desaturase domain protein [Naegleria gr... [more]
WP_083423331.13.900e-5741.39hypothetical protein [Stigmatella aurantiaca] >SEM... [more]
WP_002616070.11.100e-5640.18fatty acid desaturase domain protein [Stigmatella ... [more]
OAI41450.19.600e-5639.52hypothetical protein AYO40_03060 [Planctomycetacea... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL082nonsL082Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL080nonsL080Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR058ncniR058Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR110ngnoR110Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK009358NSK009358Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO04G04310.1NO04G04310.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|579510gene_2218Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100002g157gene1784Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO04G04310.1NO04G04310.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO04G04310 ID=NO04G04310|Name=NO04G04310|organism=Nannochloropsis oceanica|type=gene|length=3096bp
GCGAGAGGGCTTCTGCTCCTTAGTCTTTCTGAATCAGACTTTCCGTGCAC
ATACAATTCGGACACTCCACCAAACCTGCAGTACTCTCTGAGCTACATGT
CCTAGCGTCGCTCGGCCGTACTCGAAACGCTTCCTCGCTTTGGCGATGAG
TTCTTCGTTTCCCAACGGCCTTGGGCACTCGCCAGAGGAAACCACGTCTG
TGCGCCTCGCTCTGCAAAAAGTCGTGTCAAGTGTCCAATGACTACGTTAT
GGCCTGGGCGTGACTGGTTATATTGCATTCGCTGGGCGGATCTCATTCAG
GGGCTGTCATAAGTGTCTTGTGGTCCACGGGCGGGGCTAGTCGGGCATGC
CAATCCCTCGTCTTTTCTTTGCTTTTGCTGTCGTGCACTCGATGATTCAA
AGTCTCCCACCAACTACTGTCACGTACGCACATACGCTTCCTCGTCACTC
ATGCAACTCCGTCTTTCCCACTCGATCCCCATGCACTCTGCACAGGCCTT
CCTGTGTGCCACGATCGCGGGGCCATTTGAACGCAAGGCAGGTCTTGTTC
TTGCTTCGTCTTCGATCTCTCCCCACTGCTGCCTGTGTCCTTGTGGAAGA
GTGAGTGGAACGAAGAAGAGATTTTACACAAGGAGATATGGCGCCCAACG
CAGAGCTTACCCGGCGACAGCGACCAGCGTCGAACCATCCAATCAAGCCC
TCCGTCGCAGgtgagaagtagtcatgggacaccagacgagtagggggagt
gaacggtcgaatgcgatctctcgctcttggtgtgtacgcgtgtgcgcgta
cacgtgtgtgtgttgtggattatcctgatctttccctccgatggcactgt
gatgctttccatgaaggcgatgggctgagacatgcttgtgttgtcgctgc
ctgtggtcaatttgactcaacccaaccaaccctttctacctgccctccac
ttcagtcaaatgctccaagaacggactcaaccgatggtgttcttccgtct
ctggctctctacgaatttcgcacccacatcattcatttctttccaccttc
cctacgtacacatctctccttcccctcccttaaatcagGCATGGAAAAGT
CCTCGCGCAGCTCCAGCTCCGAGAGCCTCAGCAACAGTAATAGCCAGCAA
GGCATCTCCCATCTCAGCCAAGAGGCCGCCAAAGTCAAACTGATTCGGGA
CGCTATCCGTGCCGAAGACAAGCGTCTGCGGGCCGCCTATCCTTTCCCCT
TGGGCGAGCACTGGCAGAGCGCCGTTGGTCTCTTCATCTATGTAGCGGCA
TGGGCGGCTTGGGGACTTGCGACGCATGCTTGGTGGCACGGCTCGTTAAG
CATGCCGGCGCTGATGGTAATTAATGCGCTGGCTATCTCGCTTTTGCATG
AGATGGAGCATGATTTGATCCATGAGTTGTATTTTAAACGAAGCCCGTGG
GTGCAGCATGTAATGTTTGCTGGGATTTGGCTCATCAAGAGCAATGCCTC
GCCGTGGTGGAGGAAGTACTACCATCTGCGGCACCACCAGTACAGTGGGC
AGGTGAATGACGTGGAGGAGCGCTTAATCGGCCTGGGCCTTCCTTGGTAC
TCGCCTAAGAGGCTGCTCGTCACTCTGACGCCCGCAGGGACTTTGTTGGT
GGCTAATGACATTGCAAGGGATGATCCGGAATTTTCGCGCTTTAATTTGG
TTTTATGCAATTCTCCCGTCATTGTCCTGTCGACGGCAGCGATGCTTGTG
CATTTAGTGGCGTCTTTGGGAGGGGGTGAAGCGCTTGTGAGGGCGGGTCT
CCTCAGCGAGGGCATGTTTGCGATGCTGTCGCACCGGTTGTTGCCGGCCC
TGTTTTTGTACAACGCCACGGTGAACTTCCCGAATGTGTTGCGGCAGAGT
TGTCTGGTGATCATCTCGACGTACTGCCACTATTATGGGGACATCCCAGA
GAGGGACGTTTTCTTCCAAACGCAAATTTTGGACCATCCGTTTCTGTGGC
CGTTGCAGTTGTTCTGTTTTAATTTCGGAGCGACGCATATCATTCATCAC
TTTGTGACACGGCAGCCATTTTATTTGCGGCAGGTAGTGGCGTTTGGGGT
GTTGCCGTTGATGAAGGCACAGGGGTGCCGGCATAACGATATGAGCAACA
ATTTTAGGGGTAACAGGTGGGCGGGCGGAGAGGACGCGGTCGACCATGAG
GAGGAGACGACGACCTTGACCGGGATCAAGGGGAGAGCGGGCAAGGGAGG
GAATGGGGGAATGGGTGGGGCGTCATCGACGGACACGAGCCCGACGACGA
GCGATGATGAGGATGGAGCGGAGGACCACATAAAGGGGGCGTAACGTGGA
GGAGGAAGGAAGGGAGGGAGGGGAGGAGGAAGTGTTTGACCGTTTTTCAA
GCTCTTATTGGATGGTTGAAGGGGAGCCCGATGACCAGGCAGACAGAGAG
AGGGAAAGAGATGGAGAGTGATATACATCGTGCCGAAATATTTGGAAATG
GTGGGTTCGTTTTACTCTGAGAATTGATAGTTAACGGTCGGTCGTCATTA
TATTTATATCGCTGTCATTATGTTATGTACGGAAACGCGCTCGCCTAGAG
CAAGCGAAGCATGCAAGGAGTCAGAGCAATAGCAACGCGAGTCAAAAAAA
AAAGGTGTGAAGTATGGGTTACCAAGAACGACGAGATTTGAGAAAAATAG
AGCACATGGATTGAGAGCGATGTCGTGTGTAGTGGAATGGAAATAAGGAG
GGAGCAATAAAAACCCTTTAAAAAACCAAGAAAAAAAATCAGGAGCAGGC
CCAGTACTCAGCGATCAAAAACAGAAAGGTGTGTGTCTGCGTCAATTTGA
CGAGGAAGGATGTGGCGAGAGGAAATAGAGTGACGTCGTCAAATAACAGC
AACGAAAGTGGGGGCCCCCAAAGCAGTTATGAGCCAGCAAACGAACGAGA
ACAAGGAACACAAACAATGCAACCGTACAGAAAGCCACTCCCCAGGAAAA
AAGGAGATAGAGATGGAGAAAAAAAGAGAAAGGAGACATACAAAGAAAAA
TGGAAGGATCATAAGAAAATTGCATTTTTATTTTATTTTATTTTCT
back to top

protein sequence of NO04G04310.1

>NO04G04310.1-protein ID=NO04G04310.1-protein|Name=NO04G04310.1|organism=Nannochloropsis oceanica|type=polypeptide|length=443bp
MAPNAELTRRQRPASNHPIKPSVAGMEKSSRSSSSESLSNSNSQQGISHL
SQEAAKVKLIRDAIRAEDKRLRAAYPFPLGEHWQSAVGLFIYVAAWAAWG
LATHAWWHGSLSMPALMVINALAISLLHEMEHDLIHELYFKRSPWVQHVM
FAGIWLIKSNASPWWRKYYHLRHHQYSGQVNDVEERLIGLGLPWYSPKRL
LVTLTPAGTLLVANDIARDDPEFSRFNLVLCNSPVIVLSTAAMLVHLVAS
LGGGEALVRAGLLSEGMFAMLSHRLLPALFLYNATVNFPNVLRQSCLVII
STYCHYYGDIPERDVFFQTQILDHPFLWPLQLFCFNFGATHIIHHFVTRQ
PFYLRQVVAFGVLPLMKAQGCRHNDMSNNFRGNRWAGGEDAVDHEEETTT
LTGIKGRAGKGGNGGMGGASSTDTSPTTSDDEDGAEDHIKGA*
back to top
Synonyms
Publications