NO04G04240, NO04G04240 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO04G04240 vs. NCBI_GenBank
Match: EWM28666.1 (retinol retinaldehyde reductase [Nannochloropsis gaditana]) HSP 1 Score: 536.6 bits (1381), Expect = 6.200e-149 Identity = 266/361 (73.68%), Postives = 298/361 (82.55%), Query Frame = 0
Query: 1 MVLLNLINNIAHIPVFEDVCYYNFFFWAWFLGPLLGGLVFLHDLTTXXXXXXXXXXXXXXXXXXXXXXXXXXGKTLALRLQNKGFKVYATCLNQQNADALKKECEALHTVILDVTKEDQVARVVAEVDAANPQGLFALVNNAGVSRAGLIDWLNISDFRFCMEVNYFAMVSVTKAFLPSLKKSKGRVIMMSSIMGVTCGLPVTSAYSASKRAVEIFSSALRQELRPWGITVSTINPGFHRTEINRNASDNLKLTFEKAPQEVQEQYGEKYLHAASAAMTRYTETNALDPKNVIRAYIHAITSTRPKVQYRVGIDAKGLFPFLQIFPLRVGEVIAYYASTTPEMRVIRGAKWGQGSAPVGVS 362
M L+N NN+AHIPVFED+CYYNFFFWAWF GPLLG LVFLHD TT GK+LAL L KGFKVYA+CL Q++AD LKKEC+AL T+ILDVTKEDQVA V A + AA+PQG+FALVNNAGVSRAGLIDWLN+SDFRFCMEVNYF++VSVTKAFLPSLKKSKGR+IMMSS GV CG PVT AYS+SK A+E+F+SALRQELR WGITVSTINPGFHRTEIN NA+ LK TFEKAP+E+QE+YGE+YL A + A TR+TET ALDPKNVIRAY+HAITSTRPKVQYRVGIDAKGLFPFLQIFPLRVGE+ AYYASTT MRV+RGA+W QG APVG+S
Sbjct: 1 MGLINWANNVAHIPVFEDMCYYNFFFWAWFWGPLLGALVFLHDATTGFFFSIFYVEPSEDKVVVITGCDTGFGKSLALDLGKKGFKVYASCLTQRSADELKKECDALQTIILDVTKEDQVASVAARISAAHPQGIFALVNNAGVSRAGLIDWLNMSDFRFCMEVNYFSVVSVTKAFLPSLKKSKGRIIMMSSAAGVACGYPVTCAYSSSKHALELFASALRQELRTWGITVSTINPGFHRTEINHNAAGALKATFEKAPREIQEEYGEEYLGATAEATTRFTETQALDPKNVIRAYVHAITSTRPKVQYRVGIDAKGLFPFLQIFPLRVGEICAYYASTTSGMRVVRGARWDQGKAPVGMS 361
BLAST of NO04G04240 vs. NCBI_GenBank
Match: EWM28695.1 (retinol retinaldehyde reductase [Nannochloropsis gaditana]) HSP 1 Score: 343.2 bits (879), Expect = 1.000e-90 Identity = 173/362 (47.79%), Postives = 234/362 (64.64%), Query Frame = 0
Query: 4 LNLINNIAHIPVFEDVCYYNFFFWAWFLGPLLGGLVFLHDLTTXXXXXXXXXXXXXXXXXXXXXXXXXXGKTLALRLQNKGFKVYATCLNQQNADALKKECEALHTVILDVTKEDQVARVVAEVDAANPQGLFALVNNAGVSRAGLIDWLNISDFRFCMEVNYFAMVSVTKAFLPSLKKSKGRVIMMSSIMGVTCGLPVTSAYSASKRAVEIFSSALRQELRPWGITVSTINPGFHRTEINRNASDNLKLTFEKAPQEVQEQYGEKYLHAASAAMTRYTETNALDPKNVIRAYIHAITSTRPKVQYRVGIDAKGLFPFLQIFPLRVGEVIAYYASTTPEMRVIRG------AKWGQGSAPVG 360
L NN+ HI + E+ +Y++F AW LGP + L+ ++D + G++LA+RL KGF+VYA CL + +K EC + T++LDVT E+QV A VDA NP+GL+ALVNNAGV+++GLIDW +SDFRFCMEVN+F +VSVTKAFLP +K+ KGR++++SS+ GV+CG P+++ YSASK AVE+F+S+LRQELR WGI VSTINPGFHRTE+N+ A L+ + K +Q QYG+ Y + +TE DP NV+RA HA+T TRP++QYRVG+DAK + QIFPLRVGE + Y +T +MR I G A+ Q AP G
Sbjct: 5 LEFWNNLCHIDLLEEWIWYSYFTGAWLLGPFMAFLIVVYDFCSGFAFPLWHVEPSRDKAIFITGCDTGFGRSLAVRLAQKGFRVYAACLTANGVEEIKAECSTVETMMLDVTDENQVQEAAARVDAENPEGLYALVNNAGVAKSGLIDWFGLSDFRFCMEVNFFGVVSVTKAFLPLIKRCKGRIVVVSSVAGVSCGYPLSAPYSASKHAVELFASSLRQELRAWGIKVSTINPGFHRTEMNKVAVKGLETCWSKVDPVIQAQYGQSYFEGCRDFVKTHTEDVVFDPINVVRAMEHAVTCTRPRIQYRVGLDAKYGLVWTQIFPLRVGEKLIYALTTNKKMRSIVGLPTAPRAEDAQADAPFG 366
BLAST of NO04G04240 vs. NCBI_GenBank
Match: EWM25060.1 (serine threonine-protein kinase dclk3 [Nannochloropsis gaditana]) HSP 1 Score: 218.0 bits (554), Expect = 4.900e-53 Identity = 123/339 (36.28%), Postives = 193/339 (56.93%), Query Frame = 0
Query: 3 LLNLINNIAHIPVFEDVCYYNFFFWAWFLGPLLG-GLVFLHDLTTXXXXXXXXXXXXXXXXXXXXXXXXXXGKTLALRLQNKGFKVYATCLNQQNADALKKECE----ALHTVILDVTKEDQVARVVAEVDAANPQGLFALVNNAGVSRAGLIDWLNISDFRFCMEVNYFAMVSVTKAFLPSLKKSKGRVIMMSSIMGVTCGLPVTSAYSASKRAVEIFSSALRQELRPWGITVSTINPGFHRTEINRNASDNLKLTFEKAPQEVQEQYGEKYLHAASAAMTRYTETNALDPKNVIRAYIHAITSTRPKVQYRVGIDAK-GLFPFLQIFPLRVGEVIAY 336
+LNL+N+I H+P+ +D+ ++ + F LGPL GL+ + G LA+ L KG++VYA CL Q LK + ++ +V++DVTK+ + RVV ++ +P+ LFA+V NAGV R GL+DW ++ +R MEVN FAM++ KA LP LK+SKGR++ ++S+ G+ G P SAY+ASK A E FS++LR EL WGI V T+NP FHRT I+ NA++ +K ++ + Q +YG +YL A + T+ DP++V+ + A T+ P+ QY VG DA L P + + + +++++
Sbjct: 1210 MLNLMNDIMHLPIVDDIAWHLYHFVRLLLGPLWALGLLISFLVKLLSGALVTRLEQPKGRAVLITGCDTGFGYDLAIALVKKGWRVYAGCLTQAAVAELKTKAAGSAGSMVSVLMDVTKQADIDRVVEQIAKESPKQLFAVVCNAGVGRGGLVDWTPLATYRAIMEVNLFAMIATCKACLPLLKESKGRIVNVTSMAGIFLGAPCMSAYAASKHAAEAFSTSLRFELEGWGIRVVTVNPSFHRTRISTNAAETVKQAYDDLDAKTQAEYGLEYLRAVQKLTSDQTD-GCWDPRHVVNTLVRATTAVSPRTQYIVGADATFCLLPLMNLPTPDIEKIVSF 1547
BLAST of NO04G04240 vs. NCBI_GenBank
Match: KXJ19453.1 (17-beta-hydroxysteroid dehydrogenase type 6 [Exaiptasia pallida]) HSP 1 Score: 179.5 bits (454), Expect = 1.900e-41 Identity = 112/268 (41.79%), Postives = 155/268 (57.84%), Query Frame = 0
Query: 73 GKTLALRLQNKGFKVYATCLNQQNADALKKEC-EALHTVILDVTKEDQVARVVAEVDAANP--QGLFALVNNAGVSRAGLIDWLNISDFRFCMEVNYFAMVSVTKAFLPSLKKSKGRVIMMSSIMGVTCGLPVTSAYSASKRAVEIFSSALRQELRPWGITVSTINPGFHRTEI--NRNASDNLKLTFEKAPQEVQEQYGEKYLHAASAAMTRYTETNALDPK--NVIRAYIHAITSTRPKVQYRVGIDAKGLFPFLQIFPLRVGEVI 334
GK A+RL GF V ATCL ++ LK+E L T LDVTK DQV V +V A P +GL+ +VNNAGV+ GL+DW+++ F+ +VN + M+ VTK FLP +KK+KGR++ ++S G C LP AYS SK A E FS ALR+E+ +G+ VS + PGF +T + N S+ + + K +E QE+YGE++ M P VI A HA+TSTRP +Y +G DA L+ +L P VG+ I
Sbjct: 66 GKMAAIRLDQLGFHVIATCLTDESQKELKEEASNKLTTFKLDVTKCDQVQDVYHKVTALIPRDKGLWGVVNNAGVATVGLVDWVSLETFKRSADVNLWGMIDVTKTFLPLIKKTKGRIVNVTSXGGRAC-LPNAVAYSVSKFAAEAFSDALRREIADFGVKVSIVEPGFFQTPMVTKANLSNAWRDVWNKLDKEKQEEYGEEFYXIQVENMLVGMVDTCCSPSTYKVIDAIEHAVTSTRPNSRYVIGWDANLLWIWLSRLPASVGDFI 332
BLAST of NO04G04240 vs. NCBI_GenBank
Match: XP_020917493.1 (17-beta-hydroxysteroid dehydrogenase type 6-like [Exaiptasia pallida]) HSP 1 Score: 179.5 bits (454), Expect = 1.900e-41 Identity = 112/268 (41.79%), Postives = 155/268 (57.84%), Query Frame = 0
Query: 73 GKTLALRLQNKGFKVYATCLNQQNADALKKEC-EALHTVILDVTKEDQVARVVAEVDAANP--QGLFALVNNAGVSRAGLIDWLNISDFRFCMEVNYFAMVSVTKAFLPSLKKSKGRVIMMSSIMGVTCGLPVTSAYSASKRAVEIFSSALRQELRPWGITVSTINPGFHRTEI--NRNASDNLKLTFEKAPQEVQEQYGEKYLHAASAAMTRYTETNALDPK--NVIRAYIHAITSTRPKVQYRVGIDAKGLFPFLQIFPLRVGEVI 334
GK A+RL GF V ATCL ++ LK+E L T LDVTK DQV V +V A P +GL+ +VNNAGV+ GL+DW+++ F+ +VN + M+ VTK FLP +KK+KGR++ ++S G C LP AYS SK A E FS ALR+E+ +G+ VS + PGF +T + N S+ + + K +E QE+YGE++ M P VI A HA+TSTRP +Y +G DA L+ +L P VG+ I
Sbjct: 55 GKMAAIRLDQLGFHVIATCLTDESQKELKEEASNKLTTFKLDVTKCDQVQDVYHKVTALIPRDKGLWGVVNNAGVATVGLVDWVSLETFKRSADVNLWGMIDVTKTFLPLIKKTKGRIVNVTSXGGRAC-LPNAVAYSVSKFAAEAFSDALRREIADFGVKVSIVEPGFFQTPMVTKANLSNAWRDVWNKLDKEKQEEYGEEFYXIQVENMLVGMVDTCCSPSTYKVIDAIEHAVTSTRPNSRYVIGWDANLLWIWLSRLPASVGDFI 321
BLAST of NO04G04240 vs. NCBI_GenBank
Match: XP_022787995.1 (retinol dehydrogenase 7-like isoform X1 [Stylophora pistillata] >PFX27243.1 Retinol dehydrogenase 3 [Stylophora pistillata]) HSP 1 Score: 177.6 bits (449), Expect = 7.300e-41 Identity = 111/287 (38.68%), Postives = 160/287 (55.75%), Query Frame = 0
Query: 73 GKTLALRLQNKGFKVYATCLNQQNADALKKECE----ALHTVILDVTKEDQVARVVAEVDAANPQGLFALVNNAGVSRAGLIDWLNISDFRFCMEVNYFAMVSVTKAFLPSLKKSKGRVIMMSSIMGVTCGLPVTSAYSASKRAVEIFSSALRQELRPWGITVSTINPGFHRTEINRNASDNLKLTFEK----APQEVQEQYGEKYLHAASAAMTRYTETNALDP--KNVIRAYIHAITSTRPKVQYRVGIDAKGLFPFLQIFPLRVGEVIAYYASTTPEMRVIRGA 350
G+ ALRL + GF V+ATCL + + L C ALH + D + + + VA+ N +GL+ LVNNAG+++ G I+W I +F+ +VN + ++ VTK FLP +KK +GR+I ++SI G TC LP SAYS SK VE FS ALR+EL P G+ VS + PGF +T+I DNLK +++ ++E+YGEK+ + M P V+ A +H++TS PK +Y VG DAK L+ ++ P VG+ I E V GA
Sbjct: 75 GRETALRLDSLGFNVFATCLTSEGQENLTAACSKRLTALHLDVTDSKEIKETYKFVAQYLPEN-RGLWGLVNNAGIAKVGPIEWQTIEEFKQIADVNLWGLIDVTKVFLPLIKKERGRIINLASIGGRTC-LPHASAYSISKFGVEAFSDALRRELGPTGVKVSIVEPGFFQTKITN--PDNLKGQWQELWANLNHSLKEEYGEKFYETSVKNMLTGMVDTCASPYLYKVVDAIVHSLTSRYPKTRYMVGWDAKLLWIWISRLPAGVGDAILNLLGDKAEPIVCTGA 357
BLAST of NO04G04240 vs. NCBI_GenBank
Match: XP_022787997.1 (retinol dehydrogenase 7-like isoform X2 [Stylophora pistillata]) HSP 1 Score: 177.6 bits (449), Expect = 7.300e-41 Identity = 111/287 (38.68%), Postives = 160/287 (55.75%), Query Frame = 0
Query: 73 GKTLALRLQNKGFKVYATCLNQQNADALKKECE----ALHTVILDVTKEDQVARVVAEVDAANPQGLFALVNNAGVSRAGLIDWLNISDFRFCMEVNYFAMVSVTKAFLPSLKKSKGRVIMMSSIMGVTCGLPVTSAYSASKRAVEIFSSALRQELRPWGITVSTINPGFHRTEINRNASDNLKLTFEK----APQEVQEQYGEKYLHAASAAMTRYTETNALDP--KNVIRAYIHAITSTRPKVQYRVGIDAKGLFPFLQIFPLRVGEVIAYYASTTPEMRVIRGA 350
G+ ALRL + GF V+ATCL + + L C ALH + D + + + VA+ N +GL+ LVNNAG+++ G I+W I +F+ +VN + ++ VTK FLP +KK +GR+I ++SI G TC LP SAYS SK VE FS ALR+EL P G+ VS + PGF +T+I DNLK +++ ++E+YGEK+ + M P V+ A +H++TS PK +Y VG DAK L+ ++ P VG+ I E V GA
Sbjct: 50 GRETALRLDSLGFNVFATCLTSEGQENLTAACSKRLTALHLDVTDSKEIKETYKFVAQYLPEN-RGLWGLVNNAGIAKVGPIEWQTIEEFKQIADVNLWGLIDVTKVFLPLIKKERGRIINLASIGGRTC-LPHASAYSISKFGVEAFSDALRRELGPTGVKVSIVEPGFFQTKITN--PDNLKGQWQELWANLNHSLKEEYGEKFYETSVKNMLTGMVDTCASPYLYKVVDAIVHSLTSRYPKTRYMVGWDAKLLWIWISRLPAGVGDAILNLLGDKAEPIVCTGA 332
BLAST of NO04G04240 vs. NCBI_GenBank
Match: XP_015776114.1 (PREDICTED: retinol dehydrogenase 3-like isoform X1 [Acropora digitifera]) HSP 1 Score: 166.0 bits (419), Expect = 2.200e-37 Identity = 100/268 (37.31%), Postives = 148/268 (55.22%), Query Frame = 0
Query: 73 GKTLALRLQNKGFKVYATCLNQQNADALKKEC-EALHTVILDVTKEDQVARVVAEVDAANP--QGLFALVNNAGVSRAGLIDWLNISDFRFCMEVNYFAMVSVTKAFLPSLKKSKGRVIMMSSIMGVTCGLPVTSAYSASKRAVEIFSSALRQELRPWGITVSTINPGFHRTEI--NRNASDNLKLTFEKAPQEVQEQYGEKYLHAASAAMTRYTETNALDPK--NVIRAYIHAITSTRPKVQYRVGIDAKGLFPFLQIFPLRVGEVI 334
GK AL L GF V+ATCL ++ + L C E L T+ LDVT ++ + V P GL+ L+NNAG++R G ++W ++ D++ +VN + ++ VTK FLP +KK GR+I ++SI G LP S+YS SK VE FS ALR+EL+ G+ VS I PGF +T I N K + K ++E+YG + + + M + P V+ A +HA+ S PK +Y VG DAK L+ ++ P VG+ +
Sbjct: 81 GKVTALELDRLGFNVFATCLTKEGQEELNAVCSERLKTIHLDVTDSQEIRDALGFVMQNLPANTGLWGLINNAGIARIGPVEWQSLEDYKRVADVNLWGLIDVTKVFLPLIKKECGRIINLASIAG-RASLPHASSYSISKFGVEAFSDALRRELKSRGVKVSVIEPGFFKTNITNKENLQGMWKELWAKLDPNLKEEYGYGFYQTSVSNMLKGMVDTCASPHLCKVVDAIVHALASQNPKSRYVVGWDAKLLWIWISWLPAPVGDAL 347
BLAST of NO04G04240 vs. NCBI_GenBank
Match: XP_015776115.1 (PREDICTED: retinol dehydrogenase 3-like isoform X2 [Acropora digitifera]) HSP 1 Score: 166.0 bits (419), Expect = 2.200e-37 Identity = 100/268 (37.31%), Postives = 148/268 (55.22%), Query Frame = 0
Query: 73 GKTLALRLQNKGFKVYATCLNQQNADALKKEC-EALHTVILDVTKEDQVARVVAEVDAANP--QGLFALVNNAGVSRAGLIDWLNISDFRFCMEVNYFAMVSVTKAFLPSLKKSKGRVIMMSSIMGVTCGLPVTSAYSASKRAVEIFSSALRQELRPWGITVSTINPGFHRTEI--NRNASDNLKLTFEKAPQEVQEQYGEKYLHAASAAMTRYTETNALDPK--NVIRAYIHAITSTRPKVQYRVGIDAKGLFPFLQIFPLRVGEVI 334
GK AL L GF V+ATCL ++ + L C E L T+ LDVT ++ + V P GL+ L+NNAG++R G ++W ++ D++ +VN + ++ VTK FLP +KK GR+I ++SI G LP S+YS SK VE FS ALR+EL+ G+ VS I PGF +T I N K + K ++E+YG + + + M + P V+ A +HA+ S PK +Y VG DAK L+ ++ P VG+ +
Sbjct: 75 GKVTALELDRLGFNVFATCLTKEGQEELNAVCSERLKTIHLDVTDSQEIRDALGFVMQNLPANTGLWGLINNAGIARIGPVEWQSLEDYKRVADVNLWGLIDVTKVFLPLIKKECGRIINLASIAG-RASLPHASSYSISKFGVEAFSDALRRELKSRGVKVSVIEPGFFKTNITNKENLQGMWKELWAKLDPNLKEEYGYGFYQTSVSNMLKGMVDTCASPHLCKVVDAIVHALASQNPKSRYVVGWDAKLLWIWISWLPAPVGDAL 341
BLAST of NO04G04240 vs. NCBI_GenBank
Match: XP_015776116.1 (PREDICTED: retinol dehydrogenase 3-like isoform X3 [Acropora digitifera] >XP_015776118.1 PREDICTED: retinol dehydrogenase 3-like isoform X3 [Acropora digitifera]) HSP 1 Score: 166.0 bits (419), Expect = 2.200e-37 Identity = 100/268 (37.31%), Postives = 148/268 (55.22%), Query Frame = 0
Query: 73 GKTLALRLQNKGFKVYATCLNQQNADALKKEC-EALHTVILDVTKEDQVARVVAEVDAANP--QGLFALVNNAGVSRAGLIDWLNISDFRFCMEVNYFAMVSVTKAFLPSLKKSKGRVIMMSSIMGVTCGLPVTSAYSASKRAVEIFSSALRQELRPWGITVSTINPGFHRTEI--NRNASDNLKLTFEKAPQEVQEQYGEKYLHAASAAMTRYTETNALDPK--NVIRAYIHAITSTRPKVQYRVGIDAKGLFPFLQIFPLRVGEVI 334
GK AL L GF V+ATCL ++ + L C E L T+ LDVT ++ + V P GL+ L+NNAG++R G ++W ++ D++ +VN + ++ VTK FLP +KK GR+I ++SI G LP S+YS SK VE FS ALR+EL+ G+ VS I PGF +T I N K + K ++E+YG + + + M + P V+ A +HA+ S PK +Y VG DAK L+ ++ P VG+ +
Sbjct: 55 GKVTALELDRLGFNVFATCLTKEGQEELNAVCSERLKTIHLDVTDSQEIRDALGFVMQNLPANTGLWGLINNAGIARIGPVEWQSLEDYKRVADVNLWGLIDVTKVFLPLIKKECGRIINLASIAG-RASLPHASSYSISKFGVEAFSDALRRELKSRGVKVSVIEPGFFKTNITNKENLQGMWKELWAKLDPNLKEEYGYGFYQTSVSNMLKGMVDTCASPHLCKVVDAIVHALASQNPKSRYVVGWDAKLLWIWISWLPAPVGDAL 321 The following BLAST results are available for this feature:
BLAST of NO04G04240 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO04G04240 ID=NO04G04240|Name=NO04G04240|organism=Nannochloropsis oceanica|type=gene|length=2871bpback to top protein sequence of NO04G04240.1 >NO04G04240.1-protein ID=NO04G04240.1-protein|Name=NO04G04240.1|organism=Nannochloropsis oceanica|type=polypeptide|length=371bpback to top Synonyms
Publications
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