NO04G04240, NO04G04240 (gene) Nannochloropsis oceanica

Overview
NameNO04G04240
Unique NameNO04G04240
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2871
Alignment locationchr4:1152311..1155181 +

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Properties
Property NameValue
DescriptionRetinol retinaldehyde reductase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr4genomechr4:1152311..1155181 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036291NAD(P)-bd_dom_sf
IPR002347Glc/ribitol_DH
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Homology
BLAST of NO04G04240 vs. NCBI_GenBank
Match: EWM28666.1 (retinol retinaldehyde reductase [Nannochloropsis gaditana])

HSP 1 Score: 536.6 bits (1381), Expect = 6.200e-149
Identity = 266/361 (73.68%), Postives = 298/361 (82.55%), Query Frame = 0
Query:    1 MVLLNLINNIAHIPVFEDVCYYNFFFWAWFLGPLLGGLVFLHDLTTXXXXXXXXXXXXXXXXXXXXXXXXXXGKTLALRLQNKGFKVYATCLNQQNADALKKECEALHTVILDVTKEDQVARVVAEVDAANPQGLFALVNNAGVSRAGLIDWLNISDFRFCMEVNYFAMVSVTKAFLPSLKKSKGRVIMMSSIMGVTCGLPVTSAYSASKRAVEIFSSALRQELRPWGITVSTINPGFHRTEINRNASDNLKLTFEKAPQEVQEQYGEKYLHAASAAMTRYTETNALDPKNVIRAYIHAITSTRPKVQYRVGIDAKGLFPFLQIFPLRVGEVIAYYASTTPEMRVIRGAKWGQGSAPVGVS 362
            M L+N  NN+AHIPVFED+CYYNFFFWAWF GPLLG LVFLHD TT                          GK+LAL L  KGFKVYA+CL Q++AD LKKEC+AL T+ILDVTKEDQVA V A + AA+PQG+FALVNNAGVSRAGLIDWLN+SDFRFCMEVNYF++VSVTKAFLPSLKKSKGR+IMMSS  GV CG PVT AYS+SK A+E+F+SALRQELR WGITVSTINPGFHRTEIN NA+  LK TFEKAP+E+QE+YGE+YL A + A TR+TET ALDPKNVIRAY+HAITSTRPKVQYRVGIDAKGLFPFLQIFPLRVGE+ AYYASTT  MRV+RGA+W QG APVG+S
Sbjct:    1 MGLINWANNVAHIPVFEDMCYYNFFFWAWFWGPLLGALVFLHDATTGFFFSIFYVEPSEDKVVVITGCDTGFGKSLALDLGKKGFKVYASCLTQRSADELKKECDALQTIILDVTKEDQVASVAARISAAHPQGIFALVNNAGVSRAGLIDWLNMSDFRFCMEVNYFSVVSVTKAFLPSLKKSKGRIIMMSSAAGVACGYPVTCAYSSSKHALELFASALRQELRTWGITVSTINPGFHRTEINHNAAGALKATFEKAPREIQEEYGEEYLGATAEATTRFTETQALDPKNVIRAYVHAITSTRPKVQYRVGIDAKGLFPFLQIFPLRVGEICAYYASTTSGMRVVRGARWDQGKAPVGMS 361          
BLAST of NO04G04240 vs. NCBI_GenBank
Match: EWM28695.1 (retinol retinaldehyde reductase [Nannochloropsis gaditana])

HSP 1 Score: 343.2 bits (879), Expect = 1.000e-90
Identity = 173/362 (47.79%), Postives = 234/362 (64.64%), Query Frame = 0
Query:    4 LNLINNIAHIPVFEDVCYYNFFFWAWFLGPLLGGLVFLHDLTTXXXXXXXXXXXXXXXXXXXXXXXXXXGKTLALRLQNKGFKVYATCLNQQNADALKKECEALHTVILDVTKEDQVARVVAEVDAANPQGLFALVNNAGVSRAGLIDWLNISDFRFCMEVNYFAMVSVTKAFLPSLKKSKGRVIMMSSIMGVTCGLPVTSAYSASKRAVEIFSSALRQELRPWGITVSTINPGFHRTEINRNASDNLKLTFEKAPQEVQEQYGEKYLHAASAAMTRYTETNALDPKNVIRAYIHAITSTRPKVQYRVGIDAKGLFPFLQIFPLRVGEVIAYYASTTPEMRVIRG------AKWGQGSAPVG 360
            L   NN+ HI + E+  +Y++F  AW LGP +  L+ ++D  +                          G++LA+RL  KGF+VYA CL     + +K EC  + T++LDVT E+QV    A VDA NP+GL+ALVNNAGV+++GLIDW  +SDFRFCMEVN+F +VSVTKAFLP +K+ KGR++++SS+ GV+CG P+++ YSASK AVE+F+S+LRQELR WGI VSTINPGFHRTE+N+ A   L+  + K    +Q QYG+ Y       +  +TE    DP NV+RA  HA+T TRP++QYRVG+DAK    + QIFPLRVGE + Y  +T  +MR I G      A+  Q  AP G
Sbjct:    5 LEFWNNLCHIDLLEEWIWYSYFTGAWLLGPFMAFLIVVYDFCSGFAFPLWHVEPSRDKAIFITGCDTGFGRSLAVRLAQKGFRVYAACLTANGVEEIKAECSTVETMMLDVTDENQVQEAAARVDAENPEGLYALVNNAGVAKSGLIDWFGLSDFRFCMEVNFFGVVSVTKAFLPLIKRCKGRIVVVSSVAGVSCGYPLSAPYSASKHAVELFASSLRQELRAWGIKVSTINPGFHRTEMNKVAVKGLETCWSKVDPVIQAQYGQSYFEGCRDFVKTHTEDVVFDPINVVRAMEHAVTCTRPRIQYRVGLDAKYGLVWTQIFPLRVGEKLIYALTTNKKMRSIVGLPTAPRAEDAQADAPFG 366          
BLAST of NO04G04240 vs. NCBI_GenBank
Match: EWM25060.1 (serine threonine-protein kinase dclk3 [Nannochloropsis gaditana])

HSP 1 Score: 218.0 bits (554), Expect = 4.900e-53
Identity = 123/339 (36.28%), Postives = 193/339 (56.93%), Query Frame = 0
Query:    3 LLNLINNIAHIPVFEDVCYYNFFFWAWFLGPLLG-GLVFLHDLTTXXXXXXXXXXXXXXXXXXXXXXXXXXGKTLALRLQNKGFKVYATCLNQQNADALKKECE----ALHTVILDVTKEDQVARVVAEVDAANPQGLFALVNNAGVSRAGLIDWLNISDFRFCMEVNYFAMVSVTKAFLPSLKKSKGRVIMMSSIMGVTCGLPVTSAYSASKRAVEIFSSALRQELRPWGITVSTINPGFHRTEINRNASDNLKLTFEKAPQEVQEQYGEKYLHAASAAMTRYTETNALDPKNVIRAYIHAITSTRPKVQYRVGIDAK-GLFPFLQIFPLRVGEVIAY 336
            +LNL+N+I H+P+ +D+ ++ + F    LGPL   GL+    +                            G  LA+ L  KG++VYA CL Q     LK +      ++ +V++DVTK+  + RVV ++   +P+ LFA+V NAGV R GL+DW  ++ +R  MEVN FAM++  KA LP LK+SKGR++ ++S+ G+  G P  SAY+ASK A E FS++LR EL  WGI V T+NP FHRT I+ NA++ +K  ++    + Q +YG +YL A     +  T+    DP++V+   + A T+  P+ QY VG DA   L P + +    + +++++
Sbjct: 1210 MLNLMNDIMHLPIVDDIAWHLYHFVRLLLGPLWALGLLISFLVKLLSGALVTRLEQPKGRAVLITGCDTGFGYDLAIALVKKGWRVYAGCLTQAAVAELKTKAAGSAGSMVSVLMDVTKQADIDRVVEQIAKESPKQLFAVVCNAGVGRGGLVDWTPLATYRAIMEVNLFAMIATCKACLPLLKESKGRIVNVTSMAGIFLGAPCMSAYAASKHAAEAFSTSLRFELEGWGIRVVTVNPSFHRTRISTNAAETVKQAYDDLDAKTQAEYGLEYLRAVQKLTSDQTD-GCWDPRHVVNTLVRATTAVSPRTQYIVGADATFCLLPLMNLPTPDIEKIVSF 1547          
BLAST of NO04G04240 vs. NCBI_GenBank
Match: KXJ19453.1 (17-beta-hydroxysteroid dehydrogenase type 6 [Exaiptasia pallida])

HSP 1 Score: 179.5 bits (454), Expect = 1.900e-41
Identity = 112/268 (41.79%), Postives = 155/268 (57.84%), Query Frame = 0
Query:   73 GKTLALRLQNKGFKVYATCLNQQNADALKKEC-EALHTVILDVTKEDQVARVVAEVDAANP--QGLFALVNNAGVSRAGLIDWLNISDFRFCMEVNYFAMVSVTKAFLPSLKKSKGRVIMMSSIMGVTCGLPVTSAYSASKRAVEIFSSALRQELRPWGITVSTINPGFHRTEI--NRNASDNLKLTFEKAPQEVQEQYGEKYLHAASAAMTRYTETNALDPK--NVIRAYIHAITSTRPKVQYRVGIDAKGLFPFLQIFPLRVGEVI 334
            GK  A+RL   GF V ATCL  ++   LK+E    L T  LDVTK DQV  V  +V A  P  +GL+ +VNNAGV+  GL+DW+++  F+   +VN + M+ VTK FLP +KK+KGR++ ++S  G  C LP   AYS SK A E FS ALR+E+  +G+ VS + PGF +T +    N S+  +  + K  +E QE+YGE++       M          P    VI A  HA+TSTRP  +Y +G DA  L+ +L   P  VG+ I
Sbjct:   66 GKMAAIRLDQLGFHVIATCLTDESQKELKEEASNKLTTFKLDVTKCDQVQDVYHKVTALIPRDKGLWGVVNNAGVATVGLVDWVSLETFKRSADVNLWGMIDVTKTFLPLIKKTKGRIVNVTSXGGRAC-LPNAVAYSVSKFAAEAFSDALRREIADFGVKVSIVEPGFFQTPMVTKANLSNAWRDVWNKLDKEKQEEYGEEFYXIQVENMLVGMVDTCCSPSTYKVIDAIEHAVTSTRPNSRYVIGWDANLLWIWLSRLPASVGDFI 332          
BLAST of NO04G04240 vs. NCBI_GenBank
Match: XP_020917493.1 (17-beta-hydroxysteroid dehydrogenase type 6-like [Exaiptasia pallida])

HSP 1 Score: 179.5 bits (454), Expect = 1.900e-41
Identity = 112/268 (41.79%), Postives = 155/268 (57.84%), Query Frame = 0
Query:   73 GKTLALRLQNKGFKVYATCLNQQNADALKKEC-EALHTVILDVTKEDQVARVVAEVDAANP--QGLFALVNNAGVSRAGLIDWLNISDFRFCMEVNYFAMVSVTKAFLPSLKKSKGRVIMMSSIMGVTCGLPVTSAYSASKRAVEIFSSALRQELRPWGITVSTINPGFHRTEI--NRNASDNLKLTFEKAPQEVQEQYGEKYLHAASAAMTRYTETNALDPK--NVIRAYIHAITSTRPKVQYRVGIDAKGLFPFLQIFPLRVGEVI 334
            GK  A+RL   GF V ATCL  ++   LK+E    L T  LDVTK DQV  V  +V A  P  +GL+ +VNNAGV+  GL+DW+++  F+   +VN + M+ VTK FLP +KK+KGR++ ++S  G  C LP   AYS SK A E FS ALR+E+  +G+ VS + PGF +T +    N S+  +  + K  +E QE+YGE++       M          P    VI A  HA+TSTRP  +Y +G DA  L+ +L   P  VG+ I
Sbjct:   55 GKMAAIRLDQLGFHVIATCLTDESQKELKEEASNKLTTFKLDVTKCDQVQDVYHKVTALIPRDKGLWGVVNNAGVATVGLVDWVSLETFKRSADVNLWGMIDVTKTFLPLIKKTKGRIVNVTSXGGRAC-LPNAVAYSVSKFAAEAFSDALRREIADFGVKVSIVEPGFFQTPMVTKANLSNAWRDVWNKLDKEKQEEYGEEFYXIQVENMLVGMVDTCCSPSTYKVIDAIEHAVTSTRPNSRYVIGWDANLLWIWLSRLPASVGDFI 321          
BLAST of NO04G04240 vs. NCBI_GenBank
Match: XP_022787995.1 (retinol dehydrogenase 7-like isoform X1 [Stylophora pistillata] >PFX27243.1 Retinol dehydrogenase 3 [Stylophora pistillata])

HSP 1 Score: 177.6 bits (449), Expect = 7.300e-41
Identity = 111/287 (38.68%), Postives = 160/287 (55.75%), Query Frame = 0
Query:   73 GKTLALRLQNKGFKVYATCLNQQNADALKKECE----ALHTVILDVTKEDQVARVVAEVDAANPQGLFALVNNAGVSRAGLIDWLNISDFRFCMEVNYFAMVSVTKAFLPSLKKSKGRVIMMSSIMGVTCGLPVTSAYSASKRAVEIFSSALRQELRPWGITVSTINPGFHRTEINRNASDNLKLTFEK----APQEVQEQYGEKYLHAASAAMTRYTETNALDP--KNVIRAYIHAITSTRPKVQYRVGIDAKGLFPFLQIFPLRVGEVIAYYASTTPEMRVIRGA 350
            G+  ALRL + GF V+ATCL  +  + L   C     ALH  + D  +  +  + VA+    N +GL+ LVNNAG+++ G I+W  I +F+   +VN + ++ VTK FLP +KK +GR+I ++SI G TC LP  SAYS SK  VE FS ALR+EL P G+ VS + PGF +T+I     DNLK  +++        ++E+YGEK+   +   M          P    V+ A +H++TS  PK +Y VG DAK L+ ++   P  VG+ I        E  V  GA
Sbjct:   75 GRETALRLDSLGFNVFATCLTSEGQENLTAACSKRLTALHLDVTDSKEIKETYKFVAQYLPEN-RGLWGLVNNAGIAKVGPIEWQTIEEFKQIADVNLWGLIDVTKVFLPLIKKERGRIINLASIGGRTC-LPHASAYSISKFGVEAFSDALRRELGPTGVKVSIVEPGFFQTKITN--PDNLKGQWQELWANLNHSLKEEYGEKFYETSVKNMLTGMVDTCASPYLYKVVDAIVHSLTSRYPKTRYMVGWDAKLLWIWISRLPAGVGDAILNLLGDKAEPIVCTGA 357          
BLAST of NO04G04240 vs. NCBI_GenBank
Match: XP_022787997.1 (retinol dehydrogenase 7-like isoform X2 [Stylophora pistillata])

HSP 1 Score: 177.6 bits (449), Expect = 7.300e-41
Identity = 111/287 (38.68%), Postives = 160/287 (55.75%), Query Frame = 0
Query:   73 GKTLALRLQNKGFKVYATCLNQQNADALKKECE----ALHTVILDVTKEDQVARVVAEVDAANPQGLFALVNNAGVSRAGLIDWLNISDFRFCMEVNYFAMVSVTKAFLPSLKKSKGRVIMMSSIMGVTCGLPVTSAYSASKRAVEIFSSALRQELRPWGITVSTINPGFHRTEINRNASDNLKLTFEK----APQEVQEQYGEKYLHAASAAMTRYTETNALDP--KNVIRAYIHAITSTRPKVQYRVGIDAKGLFPFLQIFPLRVGEVIAYYASTTPEMRVIRGA 350
            G+  ALRL + GF V+ATCL  +  + L   C     ALH  + D  +  +  + VA+    N +GL+ LVNNAG+++ G I+W  I +F+   +VN + ++ VTK FLP +KK +GR+I ++SI G TC LP  SAYS SK  VE FS ALR+EL P G+ VS + PGF +T+I     DNLK  +++        ++E+YGEK+   +   M          P    V+ A +H++TS  PK +Y VG DAK L+ ++   P  VG+ I        E  V  GA
Sbjct:   50 GRETALRLDSLGFNVFATCLTSEGQENLTAACSKRLTALHLDVTDSKEIKETYKFVAQYLPEN-RGLWGLVNNAGIAKVGPIEWQTIEEFKQIADVNLWGLIDVTKVFLPLIKKERGRIINLASIGGRTC-LPHASAYSISKFGVEAFSDALRRELGPTGVKVSIVEPGFFQTKITN--PDNLKGQWQELWANLNHSLKEEYGEKFYETSVKNMLTGMVDTCASPYLYKVVDAIVHSLTSRYPKTRYMVGWDAKLLWIWISRLPAGVGDAILNLLGDKAEPIVCTGA 332          
BLAST of NO04G04240 vs. NCBI_GenBank
Match: XP_015776114.1 (PREDICTED: retinol dehydrogenase 3-like isoform X1 [Acropora digitifera])

HSP 1 Score: 166.0 bits (419), Expect = 2.200e-37
Identity = 100/268 (37.31%), Postives = 148/268 (55.22%), Query Frame = 0
Query:   73 GKTLALRLQNKGFKVYATCLNQQNADALKKEC-EALHTVILDVTKEDQVARVVAEVDAANP--QGLFALVNNAGVSRAGLIDWLNISDFRFCMEVNYFAMVSVTKAFLPSLKKSKGRVIMMSSIMGVTCGLPVTSAYSASKRAVEIFSSALRQELRPWGITVSTINPGFHRTEI--NRNASDNLKLTFEKAPQEVQEQYGEKYLHAASAAMTRYTETNALDPK--NVIRAYIHAITSTRPKVQYRVGIDAKGLFPFLQIFPLRVGEVI 334
            GK  AL L   GF V+ATCL ++  + L   C E L T+ LDVT   ++   +  V    P   GL+ L+NNAG++R G ++W ++ D++   +VN + ++ VTK FLP +KK  GR+I ++SI G    LP  S+YS SK  VE FS ALR+EL+  G+ VS I PGF +T I    N     K  + K    ++E+YG  +   + + M +        P    V+ A +HA+ S  PK +Y VG DAK L+ ++   P  VG+ +
Sbjct:   81 GKVTALELDRLGFNVFATCLTKEGQEELNAVCSERLKTIHLDVTDSQEIRDALGFVMQNLPANTGLWGLINNAGIARIGPVEWQSLEDYKRVADVNLWGLIDVTKVFLPLIKKECGRIINLASIAG-RASLPHASSYSISKFGVEAFSDALRRELKSRGVKVSVIEPGFFKTNITNKENLQGMWKELWAKLDPNLKEEYGYGFYQTSVSNMLKGMVDTCASPHLCKVVDAIVHALASQNPKSRYVVGWDAKLLWIWISWLPAPVGDAL 347          
BLAST of NO04G04240 vs. NCBI_GenBank
Match: XP_015776115.1 (PREDICTED: retinol dehydrogenase 3-like isoform X2 [Acropora digitifera])

HSP 1 Score: 166.0 bits (419), Expect = 2.200e-37
Identity = 100/268 (37.31%), Postives = 148/268 (55.22%), Query Frame = 0
Query:   73 GKTLALRLQNKGFKVYATCLNQQNADALKKEC-EALHTVILDVTKEDQVARVVAEVDAANP--QGLFALVNNAGVSRAGLIDWLNISDFRFCMEVNYFAMVSVTKAFLPSLKKSKGRVIMMSSIMGVTCGLPVTSAYSASKRAVEIFSSALRQELRPWGITVSTINPGFHRTEI--NRNASDNLKLTFEKAPQEVQEQYGEKYLHAASAAMTRYTETNALDPK--NVIRAYIHAITSTRPKVQYRVGIDAKGLFPFLQIFPLRVGEVI 334
            GK  AL L   GF V+ATCL ++  + L   C E L T+ LDVT   ++   +  V    P   GL+ L+NNAG++R G ++W ++ D++   +VN + ++ VTK FLP +KK  GR+I ++SI G    LP  S+YS SK  VE FS ALR+EL+  G+ VS I PGF +T I    N     K  + K    ++E+YG  +   + + M +        P    V+ A +HA+ S  PK +Y VG DAK L+ ++   P  VG+ +
Sbjct:   75 GKVTALELDRLGFNVFATCLTKEGQEELNAVCSERLKTIHLDVTDSQEIRDALGFVMQNLPANTGLWGLINNAGIARIGPVEWQSLEDYKRVADVNLWGLIDVTKVFLPLIKKECGRIINLASIAG-RASLPHASSYSISKFGVEAFSDALRRELKSRGVKVSVIEPGFFKTNITNKENLQGMWKELWAKLDPNLKEEYGYGFYQTSVSNMLKGMVDTCASPHLCKVVDAIVHALASQNPKSRYVVGWDAKLLWIWISWLPAPVGDAL 341          
BLAST of NO04G04240 vs. NCBI_GenBank
Match: XP_015776116.1 (PREDICTED: retinol dehydrogenase 3-like isoform X3 [Acropora digitifera] >XP_015776118.1 PREDICTED: retinol dehydrogenase 3-like isoform X3 [Acropora digitifera])

HSP 1 Score: 166.0 bits (419), Expect = 2.200e-37
Identity = 100/268 (37.31%), Postives = 148/268 (55.22%), Query Frame = 0
Query:   73 GKTLALRLQNKGFKVYATCLNQQNADALKKEC-EALHTVILDVTKEDQVARVVAEVDAANP--QGLFALVNNAGVSRAGLIDWLNISDFRFCMEVNYFAMVSVTKAFLPSLKKSKGRVIMMSSIMGVTCGLPVTSAYSASKRAVEIFSSALRQELRPWGITVSTINPGFHRTEI--NRNASDNLKLTFEKAPQEVQEQYGEKYLHAASAAMTRYTETNALDPK--NVIRAYIHAITSTRPKVQYRVGIDAKGLFPFLQIFPLRVGEVI 334
            GK  AL L   GF V+ATCL ++  + L   C E L T+ LDVT   ++   +  V    P   GL+ L+NNAG++R G ++W ++ D++   +VN + ++ VTK FLP +KK  GR+I ++SI G    LP  S+YS SK  VE FS ALR+EL+  G+ VS I PGF +T I    N     K  + K    ++E+YG  +   + + M +        P    V+ A +HA+ S  PK +Y VG DAK L+ ++   P  VG+ +
Sbjct:   55 GKVTALELDRLGFNVFATCLTKEGQEELNAVCSERLKTIHLDVTDSQEIRDALGFVMQNLPANTGLWGLINNAGIARIGPVEWQSLEDYKRVADVNLWGLIDVTKVFLPLIKKECGRIINLASIAG-RASLPHASSYSISKFGVEAFSDALRRELKSRGVKVSVIEPGFFKTNITNKENLQGMWKELWAKLDPNLKEEYGYGFYQTSVSNMLKGMVDTCASPHLCKVVDAIVHALASQNPKSRYVVGWDAKLLWIWISWLPAPVGDAL 321          
The following BLAST results are available for this feature:
BLAST of NO04G04240 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM28666.16.200e-14973.68retinol retinaldehyde reductase [Nannochloropsis g... [more]
EWM28695.11.000e-9047.79retinol retinaldehyde reductase [Nannochloropsis g... [more]
EWM25060.14.900e-5336.28serine threonine-protein kinase dclk3 [Nannochloro... [more]
KXJ19453.11.900e-4141.7917-beta-hydroxysteroid dehydrogenase type 6 [Exaip... [more]
XP_020917493.11.900e-4141.7917-beta-hydroxysteroid dehydrogenase type 6-like [... [more]
XP_022787995.17.300e-4138.68retinol dehydrogenase 7-like isoform X1 [Stylophor... [more]
XP_022787997.17.300e-4138.68retinol dehydrogenase 7-like isoform X2 [Stylophor... [more]
XP_015776114.12.200e-3737.31PREDICTED: retinol dehydrogenase 3-like isoform X1... [more]
XP_015776115.12.200e-3737.31PREDICTED: retinol dehydrogenase 3-like isoform X2... [more]
XP_015776116.12.200e-3737.31PREDICTED: retinol dehydrogenase 3-like isoform X3... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL082nonsL082Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL080nonsL080Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR058ncniR058Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR110ngnoR110Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO04G04240.1NO04G04240.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO04G04240.1NO04G04240.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO04G04240 ID=NO04G04240|Name=NO04G04240|organism=Nannochloropsis oceanica|type=gene|length=2871bp
TAAAAACGGTTATTCTTCAAGTAGAATCTAATCTGCCCCTCACACTCACG
CAATTGCATGCCCCAAGCATAACATAAAAACACGGGCAAGGCTGTCCTAA
ACTTTTGTCCGACCTGGTTCGGTGCACGCACGTCCTTTCGAGGGCCCGTT
CTACGTCGCCACCAAGCAGCCACCACAACCAGACAAGCATGGTATTATTG
AACTTGATCAACAATATAGCACATATCCCCGTGTTTGAAGACGTATGCTA
CTACAACTTCTTCTTCTGGGCCTGGTTTTTGGGACCTCTCCTCGGCGGCC
TCGTCTTCCTGCACGACCTGACCACGGGCTTCTTCTTCTCGATATTTTAC
GTCAAGCCTAGCCTGGACAAGGTGATCTTTATCACGGGATGTGACACGGG
TTTTGGCAAGACCTTGGCTTTGCGCCTGCAAAACAAAGGCTTCAAGGTTT
ACGCCACTTGCTTGAACCAGCAAAACGCGGACGCGCTCAAGAAGGAGgtg
agcttggaacccgaagtggggggggatccttcattctctctcttttatca
tattgatagctgacatcttctcaaattctactcttccccgtgtcttcctc
cccctccctccgctcacgtcgattatcttccctctttgatcaaccgctcc
gtccctccctttccccgtttccacgaaatagTGCGAAGCCTTGCACACCG
TCATCCTGGACGTGACGAAGGAGGATCAAGTCGCTCGAGTGGTCGCGGAA
GTGGACGCTGCTAACCCCCAGGGGCTCTTCGCCCTTGTCAATAACGCAGG
GGTGTCTCGCGCGGGACTGATTGATTGGCTTAACATCTCCGACTTTCGGT
TTTGCATGGAAGTGAACTACTTCGCCATGGTCTCGGTAACAAAAGCCTTC
CTCCCTTCCTTGAAGAAGAGCAAGGGTCGGGTGATCATGATGTCCTCGAT
AATGGGCGTGACATGCGGATTACCCGTCACTAGTGCTTATTCTGCTTCGA
AGCGTGCGGTTGAAATCTTCTCCTCGGCCCTGCGACAGGAACTCCGACCT
TGGGGCATCACTGTCTCTACCATCAACCCCGGCTTTCACAGAACTGAGAT
CAATCGCAACGCCTCGGATAACTTGAAACTGACATTTGAGAAAGCCCCGC
AAGAGGTTCAGGAGCAGTACGGAGAGAAGTACCTGCATGCCGCCTCCGCT
GCGATGACCCGCTATACTGAGACCAATGCCCTGGACCCCAAGAACGTCAT
TCGGGCCTACATCCACGCCATCACCTCCACCCGACCTAAGGTTCAGTACC
GTGTCGGTATTGATGCCAAGGGCCTCTTCCCGTTCTTGCAGATCTTCCCC
TTGCGGGTAGGAGAAGTAATAGCTTATTACGCGTCGACGACGCCCGAGAT
GCGTGTAATTCGTGGGGCGAAATGGGGCCAGGGCTCGGCACCCGTGGGTG
TATCCCCTGCGGTGGCAGCGACTCAAAATGTTTAGAATGAACTTGAAAAG
GATCGGCATATAGGATAGTAGATTCTAGTTTGCCTTCTACTTCAACTTCC
TCCTCCTCCTTTTCCTTCTTCTCCCGCTCCTCCTCTTTTCCCTCCTCCTC
TTTCTTCTCCTACTCCTACTCCCACTCCTAATCTCACTTCTACTCCTCCT
TCCCCTCCTCCTCCTCTTACTTCTTTTATTCGTCATCTTCGTCGTCGCCA
TTCCCATCGCTGCCAATGGAGGTGGTGTTAGAGCCTTTTGAACAAAAAGG
ACATAAAAATACATTAGGAAAAGAGGTGTGCATGCATTGGTTCATTCCTC
TACTCGACAAACACACAGCAAGAAGGCGACGGACGAAATAATATTTACAC
GAAGGAAAGAAATGCGTTACCACTTTTCCTACATTTTCTTTCATGCATTT
CATCATCGGTTTTGTGTGGGCAGGTGTTCCCTCTCTGTCTTTCTCTCTCG
AGCGCTCTCAGATGCTGTTGCATAAATGTTTTCGATAGCTCCTGCTGCTG
CGTTGCTTTCGTTCTTTTTGTGATCAATTGTGCTTTTGTGTGTCTCACAT
GTATTCATCCATAGATGGTAAATCGCTCTTCTCTTTTGTTTCTCCGGCTC
CTATTTGTGAAAGATGCACGTGCTTATTTTGCTCTCCCTCCTATCTGTCC
CTCCCTCCCTTCCATCCCTCCCTCTTTTACTCGGTCCAGGCTGGCCTGGT
AGACAAAGGCAAGATGACCCCTGCTTGCCGTCTCGGCATTGCAGAAGAAT
ATGAACATGACTTAATTCGCCTTCCCACCCCCACCATCTTGTTTATATCA
CTGCTGCCATTGCCGCTGCTACTGTTGCTGCCGCTTTTATCACTCCTGTT
TTTCATGGCAGAGCCAGCGGCAGATATTCCCCTTCCGCCATATCCATATC
CAGACGATTCCACCGGTGATATAATAGGCTGCCGCCGCTGTTGCTGTTGC
TGTCGCTGCTGTTGTAGCAGTCCTGTTGCCTGATGTGCATAGAGCAGCAT
CCAGGGGTGGCGCATCGCCTCACTCAAAGTCATCCTTCTCTCCGTCTCCA
CCACCAACAACTTACTGATAAAATCCTTCGCAGCCTCCGAGACATACGTG
GGAAAATTCAACCTCCCCTCCAAGATGTTCGCAAACATGGTCCCCTCCTG
CTCCTTCAAGGCCTCCCCCTCCTCGTCCTCGTCCTCCTGGAACATCACTG
GGCTCGACTTTCGAAACGGGGTCCGGCCCACCAGAAACTCGTAGCACAGC
ACCCCCACCGACCACGTGTCTACACTCTCCGCATATCCCCTCCCGTCATG
CCGCAGCATCTCAGGACTGACGTAATCCGGCGTCCCACACAAAGTCTTCC
TCAATCCTCCCTCCCCCCCCC
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protein sequence of NO04G04240.1

>NO04G04240.1-protein ID=NO04G04240.1-protein|Name=NO04G04240.1|organism=Nannochloropsis oceanica|type=polypeptide|length=371bp
MVLLNLINNIAHIPVFEDVCYYNFFFWAWFLGPLLGGLVFLHDLTTGFFF
SIFYVKPSLDKVIFITGCDTGFGKTLALRLQNKGFKVYATCLNQQNADAL
KKECEALHTVILDVTKEDQVARVVAEVDAANPQGLFALVNNAGVSRAGLI
DWLNISDFRFCMEVNYFAMVSVTKAFLPSLKKSKGRVIMMSSIMGVTCGL
PVTSAYSASKRAVEIFSSALRQELRPWGITVSTINPGFHRTEINRNASDN
LKLTFEKAPQEVQEQYGEKYLHAASAAMTRYTETNALDPKNVIRAYIHAI
TSTRPKVQYRVGIDAKGLFPFLQIFPLRVGEVIAYYASTTPEMRVIRGAK
WGQGSAPVGVSPAVAATQNV*
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Synonyms
Publications