NO04G04220, NO04G04220 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO04G04220 vs. NCBI_GenBank
Match: EWM28772.1 (hypothetical protein Naga_100002g154 [Nannochloropsis gaditana]) HSP 1 Score: 420.6 bits (1080), Expect = 8.800e-114 Identity = 314/644 (48.76%), Postives = 376/644 (58.39%), Query Frame = 0 Query: 22 DHFQLDKDGIPNEGVLQAIEALGYTCAVHDVVAHCGLPRDLVEAEMMALLRASSGFFEI-TSASANDEI--MKYXXXXXXXXXXXXXXXXXFAANVFSTDHIRYVFPPGLRSFLRRRFVLIRMREAGAKVWGMAFAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEHRHDSGLDALRVFHRPRRXXXXXXXXXXXXXXXXXXXXXXXXXNYNPFLFGLDPQLQAQRLREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMTFLEALFSLLFGDGSPGPSQNQRWQAVAKLIHAQNGVVLPEEVAPLLTDVDPEKLDTSMLPVCARFGGRPVRCVDGKMGRNCGYLYDFAHMREGSKRSTLLVPTVVGREGEREGWEEEGEEAAAALLREERG--KGELVVEMTKID------QGGEKVPHMKEEEDGKGGDERFSXXXXXXXXXXXXXXXXXXXXXXXXXGYLIERRYVFSRAPLHLLQLSGALGLINLVGAIWASEQWVQFTEPASTVLYVVGKALLCYAALYLLLPLTRLVIISIWNRGIVRRNAVRKGLWREWKQAQMGEQGEGEGRGGREGVLYAKMEYAYKCRMEVG 655 D +LD+DG+PNEGVLQAIE LG+TC+VHDVVA CGLP+DLVEAEM A LR S+GFFE+ S SAND++ +K + ANVFSTD++RYV+P GLRS LRRRFVL+R+REAG +V +AF XXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXNYNPFLFG DPQ+QAQR RE XXXXX MTF+E++FSLLFGDG PGPSQ+++WQ +AKLIH + G+VLPEE+A L VDP LD SM PVCARFGG+PVRC+DG+ R+CGY+YDFA MR+ + STLL T + + E G +GE A ALL E G G+ VVEMT++D + G + ++E+DG S GYL E RYVFSRAPLHLLQ +GALG INLVGA+W S QW+ F EP ST LY VG+ LL YA LY+ LPL RL I++WNRGI +RN VRK LW+ WK A GE +Y KM+YA++ RME+G Sbjct: 25 DSHRLDQDGVPNEGVLQAIEYLGHTCSVHDVVARCGLPQDLVEAEMAAFLRVSNGFFEVLASPSANDDVFEVKNSDDQQANAQHLQRRDVEYVANVFSTDNVRYVYPSGLRSLLRRRFVLMRLREAGVRVLHVAF---KVVRISFGILXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNYNPFLFGRDPQMQAQRWRE-------------QQTRRRRVLGAMDEEGGRAREAGEGGDPSPGSRRRTASSASLYRLPRAPLEGTEGGGEXXXXXVDVDMTFVESVFSLLFGDGPPGPSQSRQWQTLAKLIHERGGIVLPEEIALWLRGVDPNGLDRSMFPVCARFGGQPVRCIDGETRRDCGYIYDFAGMRDKGRHSTLLSSTALREDVEEGG---KGEMEARALLAPEGGGKGGQAVVEMTRVDMTTDAAEAGIQETLSEDEDDGCSRSTGSS-----------------SSSWWDGEGYLEEGRYVFSRAPLHLLQCAGALGFINLVGAVWVSNQWILFPEPGSTALYAVGRILLWYAVLYVSLPLIRLATIAVWNRGISQRNQVRKALWKAWKAA--GEDSSSS--------VYLKMQYAHRVRMELG 622
BLAST of NO04G04220 vs. NCBI_GenBank
Match: WP_015147624.1 (hypothetical protein [Oscillatoria acuminata] >AFY80976.1 hypothetical protein Oscil6304_1262 [Oscillatoria acuminata PCC 6304]) HSP 1 Score: 77.0 bits (188), Expect = 2.400e-10 Identity = 43/109 (39.45%), Postives = 63/109 (57.80%), Query Frame = 0 Query: 330 MTFLEALFSLLFGDGSPGPS-QNQRWQAVAKLIHAQNGVVLPEEVAPLLTDVD---PEKLDTSMLPVCARFGGRPVRCVDGKMGRNCGYLYDFAHMREG-SKRSTLLVP 434 M FLE++FS LFGDG+P + + +RWQA+A I G V+ E++AP L D+ + + MLPV RF GRP DG++ +Y F ++ +R+TL VP Sbjct: 176 MNFLESVFSFLFGDGNPNANLEERRWQAIAATIRNNQGAVVAEQIAPYLDDLGTGYSNEYEDYMLPVLTRFNGRPEVSPDGQI------VYHFPELQTTVQQRNTLAVP 278
BLAST of NO04G04220 vs. NCBI_GenBank
Match: OJJ26431.1 (hypothetical protein BI308_06135 [Roseofilum reptotaenium AO1-A]) HSP 1 Score: 76.6 bits (187), Expect = 3.100e-10 Identity = 40/97 (41.24%), Postives = 57/97 (58.76%), Query Frame = 0 Query: 330 MTFLEALFSLLFGDGSPGPS-QNQRWQAVAKLIHAQNGVVLPEEVAPLLTDVD---PEKLDTSMLPVCARFGGRPVRCVDGKMGRNCGYLYDFAHMR 423 M FLEA+FS LFGDG+P + +RWQA+A I +Q GVV+ E++AP L D+ + + +LP+ RF GRP +G G LY F ++ Sbjct: 172 MNFLEAIFSFLFGDGNPNAHLEQRRWQAIAATIRSQQGVVVAEQIAPYLDDLGKGYDREYENYLLPILVRFNGRPEVTPEG------GILYQFPDLQ 262
BLAST of NO04G04220 vs. NCBI_GenBank
Match: WP_017288556.1 (hypothetical protein [Leptolyngbya boryana] >BAS56854.1 hypothetical protein LBWT_27810 [Leptolyngbya boryana IAM M-101] >BAS63202.1 hypothetical protein LBDG_27810 [Leptolyngbya boryana dg5] >BAY56959.1 hypothetical protein NIES2135_38210 [Leptolyngbya boryana NIES-2135]) HSP 1 Score: 75.1 bits (183), Expect = 9.000e-10 Identity = 37/97 (38.14%), Postives = 58/97 (59.79%), Query Frame = 0 Query: 330 MTFLEALFSLLFGDGSPGPS-QNQRWQAVAKLIHAQNGVVLPEEVAPLLTDV---DPEKLDTSMLPVCARFGGRPVRCVDGKMGRNCGYLYDFAHMR 423 + FLE+++S LFGDG+P +N+RWQA+A I G V+ E++AP L D+ ++ + MLPV ARF GRP +G+ ++Y F ++ Sbjct: 164 LNFLESIYSFLFGDGNPNADLENRRWQAIAATIQTHQGAVISEQIAPYLDDLGTQSEQEYEQYMLPVLARFDGRPEVSPEGQ------FIYQFPSLQ 254
BLAST of NO04G04220 vs. NCBI_GenBank
Match: WP_073070171.1 (hypothetical protein [Phormidesmis priestleyi]) HSP 1 Score: 75.1 bits (183), Expect = 9.000e-10 Identity = 38/83 (45.78%), Postives = 53/83 (63.86%), Query Frame = 0 Query: 330 MTFLEALFSLLFGDGSPGPS-QNQRWQAVAKLIHAQNGVVLPEEVAPLLTDVD---PEKLDTSMLPVCARFGGRPVRCVDGKM 409 + FLEA+FS LFGDG+P + +RWQA+A +I G V+ E+VAP L DV ++ + MLPV ARF GRP +G++ Sbjct: 175 INFLEAVFSFLFGDGNPNADLEERRWQAIATVIRNNRGAVIAEQVAPFLDDVGTGYDQEYEQYMLPVLARFNGRPEVSPEGQI 257
BLAST of NO04G04220 vs. NCBI_GenBank
Match: WP_106253966.1 (hypothetical protein [Phormidesmis priestleyi] >PSB20721.1 hypothetical protein C7B65_07355 [Phormidesmis priestleyi ULC007]) HSP 1 Score: 75.1 bits (183), Expect = 9.000e-10 Identity = 38/83 (45.78%), Postives = 53/83 (63.86%), Query Frame = 0 Query: 330 MTFLEALFSLLFGDGSPGPS-QNQRWQAVAKLIHAQNGVVLPEEVAPLLTDVD---PEKLDTSMLPVCARFGGRPVRCVDGKM 409 + FLEA+FS LFGDG+P + +RWQA+A +I G V+ E+VAP L DV ++ + MLPV ARF GRP +G++ Sbjct: 171 INFLEAVFSFLFGDGNPNADLEERRWQAIATVIRNNRGAVIAEQVAPFLDDVGTGYDQEYEQYMLPVLARFNGRPEVSPEGQI 253
BLAST of NO04G04220 vs. NCBI_GenBank
Match: WP_035992782.1 (hypothetical protein [Leptolyngbya sp. KIOST-1]) HSP 1 Score: 74.7 bits (182), Expect = 1.200e-9 Identity = 42/114 (36.84%), Postives = 63/114 (55.26%), Query Frame = 0 Query: 330 MTFLEALFSLLFGDGSPGPS-QNQRWQAVAKLIHAQNGVVLPEEVAPLLTDVDP---EKLDTSMLPVCARFGGRPVRCVDGKMGRNCGYLYDFAHMREGSKRSTLLVPTVVGRE 440 M LEA+FS LFGDG+P ++RWQ++A++I A GVV+ E++AP L D+ +L+ M+PV +RF G P G G +Y F ++ ++ L P RE Sbjct: 175 MNILEAIFSFLFGDGNPNADLDDRRWQSIAQVIQANGGVVVAEQIAPFLNDLGQGWNRELEDFMVPVLSRFNGVPQVSPQG------GIVYQFPELQITAQERRRLSPPQFLRE 282
BLAST of NO04G04220 vs. NCBI_GenBank
Match: WP_047155658.1 (hypothetical protein [Trichodesmium erythraeum]) HSP 1 Score: 74.7 bits (182), Expect = 1.200e-9 Identity = 41/102 (40.20%), Postives = 60/102 (58.82%), Query Frame = 0 Query: 330 MTFLEALFSLLFGDGSPGPS-QNQRWQAVAKLIHAQNGVVLPEEVAPLLTDVDPE---KLDTSMLPVCARFGGRPVRCVDGKMGRNCGYLYDFAHMREGSKR 428 M FLEA+FS LFGDG+P + QRWQA+A +I G V+ E++AP L D+ E + + +LPV RF GRP DG++ +Y F ++ +K+ Sbjct: 186 MNFLEAIFSFLFGDGNPNYNLDEQRWQAIATVIKNNQGAVVAEQIAPYLDDLGKEYAVEYEEYILPVLIRFNGRPEVSPDGQI------VYHFPDLQTTAKQ 281
BLAST of NO04G04220 vs. NCBI_GenBank
Match: WP_011610477.1 (hypothetical protein [Trichodesmium erythraeum] >ABG50084.1 conserved hypothetical protein [Trichodesmium erythraeum IMS101]) HSP 1 Score: 74.7 bits (182), Expect = 1.200e-9 Identity = 41/102 (40.20%), Postives = 60/102 (58.82%), Query Frame = 0 Query: 330 MTFLEALFSLLFGDGSPGPS-QNQRWQAVAKLIHAQNGVVLPEEVAPLLTDVDPE---KLDTSMLPVCARFGGRPVRCVDGKMGRNCGYLYDFAHMREGSKR 428 M FLEA+FS LFGDG+P + QRWQA+A +I G V+ E++AP L D+ E + + +LPV RF GRP DG++ +Y F ++ +K+ Sbjct: 186 MNFLEAIFSFLFGDGNPNYNLDEQRWQAIATVIKNNQGAVVAEQIAPYLDDLGKEYAVEYEEYILPVLIRFNGRPEVSPDGQI------VYHFPDLQTTAKQ 281
BLAST of NO04G04220 vs. NCBI_GenBank
Match: WP_073608356.1 (hypothetical protein [Phormidium tenue] >OKH48429.1 hypothetical protein NIES30_10435 [Phormidium tenue NIES-30]) HSP 1 Score: 74.3 bits (181), Expect = 1.500e-9 Identity = 42/118 (35.59%), Postives = 62/118 (52.54%), Query Frame = 0 Query: 330 MTFLEALFSLLFGDGSPGPS-QNQRWQAVAKLIHAQNGVVLPEEVAPLLTDVD---PEKLDTSMLPVCARFGGRPVRCVDGKMGRNCGYLYDFAHMREGSKRSTLLVPTVVGREGERE 444 M FLEA+FS LFGDG+P +RWQ++A++I A G V+ E++ P L D+ L+ M+PV +RF G P G G +Y F ++ +K + P RE R+ Sbjct: 169 MNFLEAVFSFLFGDGNPNDGLDERRWQSIAQVIQANGGAVVAEQITPFLGDLGKGWASDLEDFMVPVLSRFNGLPQVSPQG------GIVYQFPELQVTAKAQRTINPPPFLRESPRK 280 The following BLAST results are available for this feature:
BLAST of NO04G04220 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO04G04220 ID=NO04G04220|Name=NO04G04220|organism=Nannochloropsis oceanica|type=gene|length=1965bpback to top protein sequence of NO04G04220.1 >NO04G04220.1-protein ID=NO04G04220.1-protein|Name=NO04G04220.1|organism=Nannochloropsis oceanica|type=polypeptide|length=655bpback to top Synonyms
Publications
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