NO04G04190, NO04G04190 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO04G04190 vs. NCBI_GenBank
Match: EWM28755.1 (transcriptional activator hap2 [Nannochloropsis gaditana]) HSP 1 Score: 162.9 bits (411), Expect = 1.500e-36 Identity = 86/110 (78.18%), Postives = 90/110 (81.82%), Query Frame = 0 Query: 111 NFYDTMTTQSEGLEALIAAQEAVGPPSLAPQPIFVNPKQYERIMKRREARARLENHRKVVAERKPFLHKSRHEHAIKRPRGPGGRFLTKEERIAWDEEQARLEAPVTAAA 221 NFYD + Q EG E L A QEA G L PQPIFVNPKQYERIMKRREARARLENHRK+ AERKPFLHKSRH HA+KRPRGPGGRFLTKEERIAWDEEQA+LE T A Sbjct: 108 NFYD-HSPQMEGFEPLGAPQEAAG-SDLGPQPIFVNPKQYERIMKRREARARLENHRKIAAERKPFLHKSRHLHAVKRPRGPGGRFLTKEERIAWDEEQAQLEGTSTMGA 215
BLAST of NO04G04190 vs. NCBI_GenBank
Match: KDN38107.1 (LOW QUALITY PROTEIN: hypothetical protein RSAG8_09703, partial [Rhizoctonia solani AG-8 WAC10335]) HSP 1 Score: 94.0 bits (232), Expect = 8.800e-16 Identity = 49/90 (54.44%), Postives = 64/90 (71.11%), Query Frame = 0 Query: 115 TMTTQSEGLEALIAAQEAVGPPSLAPQPIFVNPKQYERIMKRREARARLENHRKVVAERKPFLHKSRHEHAIKRPRGPGGRFLTKEERIA 205 T T S + + AQE +L +P++VN KQY RI+KRR ARARLE ++ ERKP+LH+SRH+HA++RPRGPGGRFLT EE +A Sbjct: 105 TAATDSASSTSPVTAQE--DTEALDEEPLYVNAKQYHRILKRRSARARLEEVHRLSKERKPYLHESRHKHAMRRPRGPGGRFLTAEEIVA 192
BLAST of NO04G04190 vs. NCBI_GenBank
Match: OAQ22923.1 (hypothetical protein K457DRAFT_264066 [Mortierella elongata AG-77]) HSP 1 Score: 92.0 bits (227), Expect = 3.300e-15 Identity = 51/105 (48.57%), Postives = 68/105 (64.76%), Query Frame = 0 Query: 126 LIAAQEAVGPPSLAP---QPIFVNPKQYERIMKRREARARLENHRKVVAERKPFLHKSRHEHAIKRPRGPGGRFLTKEERIAWDEEQARLEAPVTAAAKGGGGVG 228 ++ + A+G AP +P++VN KQY RI+KRR ARA+LE ++ RKP+LH+SRH+HA++RPRGPGGRFLT +E D QA EA GGVG Sbjct: 93 MVGGEGAMGHAPAAPADEEPLYVNAKQYHRILKRRAARAKLEELNRMAKIRKPYLHESRHKHAMRRPRGPGGRFLTSQEIAEMDRLQAEFEAQ--------GGVG 189
BLAST of NO04G04190 vs. NCBI_GenBank
Match: XP_003332222.2 (hypothetical protein PGTG_14518 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] >EFP87803.2 hypothetical protein PGTG_14518 [Puccinia graminis f. sp. tritici CRL 75-36-700-3]) HSP 1 Score: 91.7 bits (226), Expect = 4.400e-15 Identity = 43/66 (65.15%), Postives = 56/66 (84.85%), Query Frame = 0 Query: 136 PSLAPQPIFVNPKQYERIMKRREARARLENHRKVVAERKPFLHKSRHEHAIKRPRGPGGRFLTKEE 202 P+ +P+FVNPKQY+RI+KRR ARARLE ++ ER+P+LH+SRH+HA++RPRGP GRFLTKEE Sbjct: 272 PNSTERPVFVNPKQYQRIIKRRLARARLEEMGRLSRERQPYLHESRHKHAVRRPRGPRGRFLTKEE 337
BLAST of NO04G04190 vs. NCBI_GenBank
Match: ELU42758.1 (CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B domain-containing protein [Rhizoctonia solani AG-1 IA]) HSP 1 Score: 91.7 bits (226), Expect = 4.400e-15 Identity = 48/92 (52.17%), Postives = 64/92 (69.57%), Query Frame = 0 Query: 117 TTQSEGLEALIAAQEAVGPPSLAPQPIFVNPKQYERIMKRREARARLENHRKVVAERKPFLHKSRHEHAIKRPRGPGGRFLTKEERIAWDEE 209 T S G + AA++ L +P++VN KQY RI+KRR ARARLE ++ ERKP+LH+SRH+HA++RPRGPGGRFLT EE A + + Sbjct: 11 TADSVGSTSPTAAEQDDEHEVLDEEPLYVNAKQYHRILKRRSARARLEEVHRLSKERKPYLHESRHKHAMRRPRGPGGRFLTAEEIAALESK 102
BLAST of NO04G04190 vs. NCBI_GenBank
Match: KNE95367.1 (hypothetical protein PSTG_11351 [Puccinia striiformis f. sp. tritici PST-78]) HSP 1 Score: 91.7 bits (226), Expect = 4.400e-15 Identity = 43/61 (70.49%), Postives = 54/61 (88.52%), Query Frame = 0 Query: 141 QPIFVNPKQYERIMKRREARARLENHRKVVAERKPFLHKSRHEHAIKRPRGPGGRFLTKEE 202 +P+FVNPKQY+RIMKRR ARARLE ++ ER+P+LH+SRH+HA++RPRGP GRFLTKEE Sbjct: 102 RPVFVNPKQYDRIMKRRLARARLEEMGRLSRERQPYLHESRHKHAVRRPRGPRGRFLTKEE 162
BLAST of NO04G04190 vs. NCBI_GenBank
Match: ORY95662.1 (CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B-domain-containing protein [Syncephalastrum racemosum]) HSP 1 Score: 91.7 bits (226), Expect = 4.400e-15 Identity = 54/119 (45.38%), Postives = 78/119 (65.55%), Query Frame = 0 Query: 129 AQEAVGPPSLAPQPIFVNPKQYERIMKRREARARLENHRKVVAERKPFLHKSRHEHAIKRPRGPGGRFLTKEERIAWDEEQARLEAPVTAAAKGGGGVGEEGDGEEGRRIHQNARTSKP 248 A+EA P+ A +P++VN KQY RI+KRR ARARLE ++ RKP+LH+SRH HA++RPRGPGGRFLT +E +A E++ +L G E+ G++ + ++R+SKP Sbjct: 79 AEEAAAAPT-AEEPLYVNAKQYHRILKRRAARARLEEISRISKARKPYLHESRHRHAMRRPRGPGGRFLTAQE-VAQLEKEGKLP----------GHNPEDDKGQDMKPSESSSRSSKP 185
BLAST of NO04G04190 vs. NCBI_GenBank
Match: POW01483.1 (hypothetical protein PSHT_12521 [Puccinia striiformis]) HSP 1 Score: 91.7 bits (226), Expect = 4.400e-15 Identity = 43/61 (70.49%), Postives = 54/61 (88.52%), Query Frame = 0 Query: 141 QPIFVNPKQYERIMKRREARARLENHRKVVAERKPFLHKSRHEHAIKRPRGPGGRFLTKEE 202 +P+FVNPKQY+RIMKRR ARARLE ++ ER+P+LH+SRH+HA++RPRGP GRFLTKEE Sbjct: 103 RPVFVNPKQYDRIMKRRLARARLEEMGRLSRERQPYLHESRHKHAVRRPRGPRGRFLTKEE 163
BLAST of NO04G04190 vs. NCBI_GenBank
Match: EJD37966.1 (hypothetical protein AURDEDRAFT_32547, partial [Auricularia subglabra TFB-10046 SS5]) HSP 1 Score: 91.3 bits (225), Expect = 5.700e-15 Identity = 44/72 (61.11%), Postives = 57/72 (79.17%), Query Frame = 0 Query: 138 LAPQPIFVNPKQYERIMKRREARARLENHRKVVAERKPFLHKSRHEHAIKRPRGPGGRFLTKEERIAWDEEQ 210 L +P++VN KQY RI+KRR ARARLE ++ +RKP+LH+SRH+HA++RPRGPGGRFLT EER A + Q Sbjct: 1 LDDEPLYVNAKQYNRIIKRRLARARLEELHRLSRQRKPYLHESRHKHAMRRPRGPGGRFLTAEERAALERSQ 72
BLAST of NO04G04190 vs. NCBI_GenBank
Match: KIJ49567.1 (hypothetical protein M422DRAFT_27935 [Sphaerobolus stellatus SS14]) HSP 1 Score: 90.9 bits (224), Expect = 7.500e-15 Identity = 46/79 (58.23%), Postives = 62/79 (78.48%), Query Frame = 0 Query: 136 PSLAPQPIFVNPKQYERIMKRREARARLENHRKVVAERKPFLHKSRHEHAIKRPRGPGGRFLTKEERIAWDEEQARLEA 215 PS+ +P++VN KQY RI+KRR ARARLE ++ +RKP+LH+SRH+HA++RPRGPGGRFLT EE A +++A EA Sbjct: 153 PSMDEEPLYVNAKQYNRILKRRVARARLEELHRLSKQRKPYLHESRHKHAMRRPRGPGGRFLTAEEIAA--QQKAAAEA 229 The following BLAST results are available for this feature:
BLAST of NO04G04190 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO04G04190 ID=NO04G04190|Name=NO04G04190|organism=Nannochloropsis oceanica|type=gene|length=1476bpback to top protein sequence of NO04G04190.1 >NO04G04190.1-protein ID=NO04G04190.1-protein|Name=NO04G04190.1|organism=Nannochloropsis oceanica|type=polypeptide|length=307bpback to top Synonyms
Publications
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