NO04G04160, NO04G04160 (gene) Nannochloropsis oceanica

Overview
NameNO04G04160
Unique NameNO04G04160
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4188
Alignment locationchr4:1134516..1138703 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr4genomechr4:1134516..1138703 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Homology
BLAST of NO04G04160 vs. NCBI_GenBank
Match: EWM24617.1 (hypothetical protein Naga_100926g1 [Nannochloropsis gaditana])

HSP 1 Score: 370.9 bits (951), Expect = 1.400e-98
Identity = 381/1008 (37.80%), Postives = 520/1008 (51.59%), Query Frame = 0
Query:  160 IAPPGSVSSIGW-----GRLGAGNVICYPKNGTEVVSMSEG-KSPCTIIVLTRSNTDPYHIPQMMNITTSKIIVGNPIDLPVLNATNKIERLFRVYPGGRLDVRFASLYRGAGWT--SKDGRSTVTVGGVTYVDFGGSFTATGCLFLAQRQTVESFLSELPKMF---THRRRLYGGVIFVAGGQLYLQGCTFIRFRPLGNPFLNSVQIGRDILIIAGNMALSG-VYNLNVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVIIRCFTITFRGYGFS-TTKNLYTIAGTGVSRTQAL-KNVVVTKAG----------------------QTLLPWQQSPRPKRRDLENEVGGE-EDSEVEIGVFDSARNAYMDGEG------KSKLIVIQSMLEEGKQVVIEDATPFEAKELKHYWGGLAQILADGAVTRGRGKVLNTTKGMIYVNNTNCFVCSVGPGTSAEHMTGPSSCVVSDACSEAETPAAAFASAKEAANVAAAEAEGDDVKPFDLSFPGMGAGSLHRELTEREIELPDVWMLWHEMTVYCRTTDPSLDTQGIIDEGCVSENYVKDIVRGYLGPTYAQDDYQLAVASANVH---DAIKALVEEPLAAAMTPEWNADCEGWTKFNIYITASDPVIEEALTEEWEAIVDNPLDFQITLLQNYDATAKITPCSLSIKRVGTAKYPSLQNMKGFKPLKNGMSLIGPSLTVAAEAAIVPVTELVEGQTYKLYVQNFMKSSQVNVFLIKGLERTGPMVATIADFDDKEGMVELEWMAPVGLEGASNSGNEQKYYLTASVGNLPALFANSQAF 1122
            + PP + +   W      R   G V+CY   G EV+ M  G +SPC +IVLT     PY I ++MN+T  KII+G PI  P+LN TN+I RLF VYPGG+L+ R   L RG G           +T+G +  V  GG F ATGC+F  +  T  +FL E+ +     T R R +G +  V GG L L GC  +RFRP GN  LN++ IGRDI ++AG   L G     +                                                                        XXXXXXXXXXXXXXXXXXXXXXX                                                        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA  IR ++ + R Y +   T   +T+AGTGV  +    +N+V+TK G                      +TL P +     +RR +  +   + ED +       S     +D  G      ++K++++Q+ + E K  +      F  + LK   GG A+ILADG V    G     T G+I  NN++CF+C+VGPG +A+H+ GP +C V D C ++  PA  +A A+E+           ++ P  L        SL     +    L D W+LWHEM VYC +TDP  +    I  GC++E Y+KD++RGY+     +++YQ+AV+ + VH   DA      + L  A++PEWN +C+GWTK++I + A+DP +E+ + + +E  V++P D + T+++N D +A++ PC++ I   G  +YPS+ +M  FKP +  M  IGP + +A   +I PV  L  G+TY +Y+QNF K + + V L+ GL +TGP+VAT+  F   +G+ E+ W  P  +       N+ KYYL A + NL A F  SQ F
Sbjct:  146 VLPPEATTIPSWVSAAQFRNTEGRVLCYASTGKEVIEMVSGDESPCEVIVLTNDRFTPYSIDKIMNVTKPKIIIGRPIYAPMLNCTNQIPRLFEVYPGGQLETRSVILVRGFGRNVGLNGNEINLTIGTIIRVQVGGQFMATGCMFRERNNTFPNFLDEVRRKLETPTARNRQFGQMTLVLGGNLVLLGCRSLRFRPFGNGVLNTMVIGRDINVVAGTATLIGHCSGSSSLWSTNYFMTGALATVMGGVLTFIGGNNIGANLLQVQGGTMVNFGTFAGVLVTVGYGYTTVKGLLFRSIAGQXXXXXXXXXXXXXXXXXXXXXXXVAGAGHTHATFTGVNNRQTGVETGYMISGCLFGVGGSNYVGAGSSFFQAIPKASSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAFIRSYSASARVYQYKYPTIYTFTVAGTGVGSSGTKGQNLVLTKGGITRYIHNKTTNTVTKISTPHVQKTLAPTRAPGGRRRRTVARKRAVQTEDLKNIPPTMGSWLKNIVDATGGLDPGLQNKIVMLQTTILERKVKLPPHPKHFRDRRLKERSGGYAKILADGLVD-FEGSEAVETPGLISANNSDCFLCNVGPGNTADHIGGPGACEVKDVCGDSNNPAEIYARAQESTTT--------NILPPALD------KSLGNVDEDGNPILSDTWILWHEMVVYCHSTDPETEDSS-ITRGCLTEQYIKDVIRGYILLDNVKNEYQMAVSESGVHASADAFPDPTLDDLKVAVSPEWNPECQGWTKYDIRMVANDPEVEQHILDIFEGFVEDPSDLETTIIENADPSAELQPCAIRITEKGEQRYPSINSMPAFKPSRRLM--IGPDVVIADGVSIEPVKFLYPGETYVVYLQNFPKGATIEVMLMDGLVQTGPVVATLDSFAG-DGIAEVSWTVPRDI-----IVNDGKYYLKAQIKNLAAFFTYSQVF 1129          
BLAST of NO04G04160 vs. NCBI_GenBank
Match: XP_005852489.1 (hypothetical protein NGA_0715800 [Nannochloropsis gaditana CCMP526] >EKU23343.1 hypothetical protein NGA_0715800 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 369.4 bits (947), Expect = 4.000e-98
Identity = 381/1010 (37.72%), Postives = 520/1010 (51.49%), Query Frame = 0
Query:  160 IAPPGSVSSIGW-----GRLGAGNVICYPKNGTEVVSMSEG-KSPCTIIVLTRSNTDPYHIPQMMNITTSKIIVGNPIDLPVLNATNKIERLFRVYPGGRLDVRFASLYRGAGWT--SKDGRSTVTVGGVTYVDFGGSFTATGCLFLAQRQTVESFLSELPKMF---THRRRLYGGVIFVAGGQLYLQGCTFIRFRPLGNPFLNSVQIGRDILIIAGNMALSG-VYNLNVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVIIRCFTITFRGYGFS-TTKNLYTIAGTGVSRTQAL-KNVVVTKAG----------------------QTLLPWQQSPRPKRRDLENEVGGE-EDSEVEIGVFDSARNAYMDGEG------KSKLIVIQSMLEEGKQVVIEDATPFEAKELKHYWGGLAQILADGAVTRGRGKVLNTTKGMIYVNNTNCFVCSVGPGTSAEHMTGPSSCVVSDACSEAETPAAAFASAKEAANVAAAEAEGDDVKPFDLSFPGMGAGSLHRELTEREIELPDVWMLWHEMTVYCRTTDPSLDTQGIIDEGCVSENYVKDIVRGYLGPTYAQDDYQLAVASANVH---DAIKALVEEPLAAAMTPEWNADCEGWTKFNIYITASDPVIEEALTEEWEAIVDNPLDFQITLLQNYDATAKITPCSLSIKRVGTAKYPSLQNMKGFKPLKNGMSLIGPSLTVAAEAAIVPVTELVEGQTYKLYVQNFMKSSQVNVFLIKGLERTGPMVATIADFDDKEGMVELEWMAP--VGLEGASNSGNEQKYYLTASVGNLPALFANSQAF 1122
            + PP + +   W      R   G V+CY   G EV+ M  G +SPC +IVLT     PY I ++MN+T  KII+G PI  P+LN TN+I RLF VYPGG+L+ R   L RG G           +T+G +  V  GG F ATGC+F  +  T  +FL E+ +     T R R +G +  V GG L L GC  +RFRP GN  LN++ IGRDI ++AG   L G     +                                                                        XXXXXXXXXXXXXXXXXXXXXXX                                                        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA  IR ++ + R Y +   T   +T+AGTGV  +    +N+V+TK G                      +TL P +     +RR +  +   + ED +       S     +D  G      ++K++++Q+ + E K  +      F  + LK   GG A+ILADG V    G     T G+I  NN++CF+C+VGPG +A+H+ GP +C V D C ++  PA  +A A+E+           ++ P  L        SL     +    L D W+LWHEM VYC +TDP  +    I  GC++E Y+KD++RGY+     +++YQ+AV+ + VH   DA      + L  A++PEWN +C+GWTK++I + A+DP +E+ + + +E  V++P D + T+++N D +A++ PC++ I   G  +YPS+ +M  FKP +  M  IGP + +A   +I PV  L  G+TY +Y+QNF K + + V L+ GL +TGP+VAT+  F   +G+ E+ W  P  + + G        KYYL A + NL A F  SQ F
Sbjct:  146 VLPPEATTIPSWVSAAQFRNTEGRVLCYASTGKEVIEMVSGDESPCEVIVLTNDRFTPYSIDKIMNVTKPKIIIGRPIYAPMLNCTNQIPRLFEVYPGGQLETRSVILVRGFGRNVGLNGNEINLTIGTIIRVQVGGQFMATGCMFRERNNTFPNFLDEVRRKLETPTARNRQFGQMTLVLGGNLVLLGCRSLRFRPFGNGVLNTMVIGRDINVVAGTATLIGHCSGSSSLWSTNYFMTGALATVMGGVLTFIGGNNIGANLLQVQGGTMVNFGTFAGVLVTVGYGYTTVKGLLFRSIAGQXXXXXXXXXXXXXXXXXXXXXXXVAGAGHTHATFTGVNNRQTGVETGYMISGCLFGVGGSNYVGAGSSFFQAIPKASSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAFIRSYSASARVYQYKYPTIYTFTVAGTGVGSSGTKGQNLVLTKGGITRYIHNKTTNTVTKISTPHVQKTLAPTRAPGGRRRRTVARKRAVQTEDLKNIPPTMGSWLKNIVDATGGLDPGLQNKIVMLQTTILERKVKLPPHPKHFRDRRLKERSGGYAKILADGLVD-FEGSEAVETPGLISANNSDCFLCNVGPGNTADHIGGPGACEVKDVCGDSNNPAEIYARAQESTTT--------NILPPALD------KSLGNVDEDGNPILSDTWILWHEMVVYCHSTDPETEDSS-ITRGCLTEQYIKDVIRGYILLDNVKNEYQMAVSESGVHASADAFPDPTLDDLKVAVSPEWNPECQGWTKYDIRMVANDPEVEQHILDIFEGFVEDPSDLETTIIENADPSAELQPCAIRITEKGEQRYPSINSMPAFKPSRRLM--IGPDVVIADGVSIEPVKFLYPGETYVVYLQNFPKGATIEVMLMDGLVQTGPVVATLDSFAG-DGIAEVSWTVPRDIIVNGKIQELWHGKYYLKAQIKNLAAFFTYSQVF 1136          
BLAST of NO04G04160 vs. NCBI_GenBank
Match: EWM24054.1 (hypothetical protein Naga_100063g15 [Nannochloropsis gaditana])

HSP 1 Score: 273.9 bits (699), Expect = 2.300e-69
Identity = 370/996 (37.15%), Postives = 515/996 (51.71%), Query Frame = 0
Query:  180 ICYPKNGTEVVSMSEG-KSPCTIIVLTRSNTDPYHIPQMMNITTSKIIVGNPIDLPVLNATNKIERLFRVYPGGRLDVRFASLYRGAG-WTSKDGRSTVTVGGVTYVDFGGSFTATGCLFLAQRQTVESFLSELPKMFTHRRRL----YGGVIFVAGGQLYLQGCTFIRFRPLGNPFLNSVQIGRDILIIAGNMALSGVYNL-NVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVIIRCFTITFRGYGFSTTKNLYTIAGTGVSRTQALKN---VVVTKAGQTLLPWQQSPRPKRRDLENEVGGEEDSEVEIGVFDSARNAYMDGEGKSKLIVIQSMLEEGKQVV---------IEDATPFEAKELKHYWGGLAQILADGAVTRGRG-----------------------------KVLNTTKGMIYVN-NTNCFVCSVGPGTSAEHMTGPSSCVVSDACSEAETPAAAFASAKEAANVAAAEAEGDDVKPFDLSFPGMGAGSLHRELTEREIELPDVWMLWHEMTVYCRTTDPSLDTQGIIDEGCVSENYVKDIVRGYLGPTYAQDDYQLA-VASANVHDAIKALVE------EPLAAAMTPEWNADCEGWTKFNIYITASDPVIEEALTEEWEAIVDNPLDFQITLLQNYDATAKITPCSLSIKRVGTAKYPSLQNMKGFKPLKNGMSLIGPSLTVAAEAAIVPVTELVEGQTYKLYVQNFMKSSQVNVFLIKGLERTGPMVATIADFDDKEGMVELEWMAPVGLEGASNSGNEQKYYLTASVGNLPALFANSQ 1120
            +CYPKNG EVV M  G +SPC +IVLT+  T  Y I + +N++  K+IVGNP+ +P++N + KIER F + PGG+LD RF  + RG G + + D    + +G    V  GG FTATG LF  +  T+ SF+ E+      + R      G  + V GG L+LQGC  +R RP G  +L +  +GR++L+IAGN   +GVYN+ +                                                                                                    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      +T + R   ++T    YT+ G G+   Q LKN    ++TK   T + + ++             G    ++E  VF+  + A + GEG+      + M +   +           + DA        ++  G  + IL D +++   G                                + T GM+ V+ +T CF+C VGPGT+ EH  G   C ++  C   +    A  S ++A           D    DL+FP M           ++ +LPD + LW+EMTVYC + D S+     I  GC+S+ YV+DI++ ++      D Y+LA VA++ VH A+   +       + LA A+ P WN DC+GW+K+++  T  +  +   L + ++A+V++P D  IT++ N+D    I PC +++ +  + KYPS+ NM  F P + G   +GP + VA   +IV    +  G+TYK+Y QNF + + V + L+   +     VA+I +F+D + +  +EW AP+ L+       + +YY+  +    P LF NSQ
Sbjct:  154 VCYPKNGYEVVKMINGTESPCRVIVLTKPFTYGYKIQRQINVSMPKVIVGNPLSMPMVNCSKKIERCFEILPGGKLDARFLIMVRGGGKYIAADRSQRLNMGTHVRVQAGGDFTATGVLFRERNNTMRSFIMEVENTLRLQSRYLNFNLGQYLTVIGGNLFLQGCFLLRVRPYGTGYLTTFSLGREVLVIAGNAVFTGVYNIGHYLFASYPWMSGKHVCVLGGTMTMIGGASVHTSGPQLHFGIGIDLAVMGGVMVTIGFSYGAAIAALLRVCGGQLTVGAGTAYHTGLTYARSYIVFAGFGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYTYSKRLKYWTTWPYKYTVGGFGIKPKQ-LKNDTAYIITKNAYTNIQYDKAT------------GIWKKKIEARVFNKTKRA-LPGEGERSFSARRPMRQRQNRYQRSLMEASNWLTDAVSTLGSLARNKLGESSIILVDSSMSEASGTGPIPSSFFSPDLKGSKDPYAMVSSMEDPDAKDVTPGMVAVSEDTRCFMCDVGPGTTEEHADGNGVCEIAAGCKGTD----AMNSWEKA----------QDRSRRDLTFPQMDLMEKVSNPDSKKQDLPDTFFLWYEMTVYCYSQDKSV-VDSKITSGCLSDIYVQDIMKTFVDED-LDDPYELAVVATSVVHAAVADFLPKEDQAYQRLAEAVQPAWNPDCQGWSKYDLQFTTRESDMNTNLQKMFDAVVESPGDMSITIIDNWDPKEDIQPCKVALVKKNSIKYPSINNMPAFFPSRRGN--LGPDVVVADGDSIVATESIEPGKTYKIYAQNFPRGTTVQLNLMSA-DGEPMEVASIPNFNDAD-VNAVEWTAPLDLD------EDTRYYVKGTPAAFPRLFGNSQ 1109          
BLAST of NO04G04160 vs. NCBI_GenBank
Match: EWM23471.1 (hypothetical protein Naga_100428g3 [Nannochloropsis gaditana])

HSP 1 Score: 265.0 bits (676), Expect = 1.100e-66
Identity = 173/564 (30.67%), Postives = 281/564 (49.82%), Query Frame = 0
Query:  617 RGYGFSTTKNLYTIAGTGVSRTQALKNVVVTKAGQTLLPWQQSPRPKRRDLENEVGGEEDSEVEIGVFDSAR----------NAYMDGEG--------KSKLIVIQSMLEEGKQVVIEDATP--FEAKELKHYWGGLAQILADGAV----------TRGRGKVLNTT----KGMIYVNNTNCFVCSVGPGTSAEHMTGPSSCVVSDACSEAETPAAAFASAKEAANVAAAEAEGDDVKPFDLSFPGMGAGSLHRELTEREIELPDVWMLWHEMTVYCRTTDPSLDTQGIIDEGCVSENYVKDIVRGYLGPTYAQ-DDYQLAVASANVHDAI---------KALVEEPLAAAMTPEWNADCEGWTKFNIYITASDPVIEEALTEEWEAIVDNPLDFQITLLQNYDATAKITPCSLSIKRVGTAKYPSLQNMKGFKPLKNGMSLIGPSLTVAAEAAIVPVTELVEGQTYKLYVQNFMKSSQVNVFLIKGLERTGPMVATIADFDDKEGMVELEWMAPVGLEGASNSGNEQKYYLTASVGNLPALFANSQAFTIVPVASAARKERRM 1137
            RG  F  +KN  T        T+++  +   +A +TL P    P   +R +   +GG   ++  +     ++             MD  G         +K++V+Q+ L EG+        P  F++ ELK  WGG A+ILADG V          TR  G V   +     G+I  NN+ CF+CSV PG + +H+ GP +C  S+AC +A+ P  A+  A+   N+        ++ P   + PG+   +           L D W+LW E+ VYC+  DP  D    I+  C+++ YV ++++ ++        +YQ+ ++   +H            +      L + + P WN DC+GWTKF++ +TAS+   E+ L + +E   ++P D ++TL++N+D +  I PC   +      ++PS++ M  F+P   G   +GP +T+A   +I P   LV G+TYK+YVQNF   +++ + L+ GLE+ GP+V TI  FDD +G+ EL W AP  ++      + +KYYL A+    P LF NSQ F+   VA A +  RRM
Sbjct:  158 RGQNFFISKNGIT-RFIYNKTTKSVTQISTPRAQKTLSPTALKPGKWKRKM-GGIGGHRKAQRGVETAGPSQAGATTMGGWLKEIMDATGGLDPSIAKNNKVVVVQTTLLEGRSHSFTAPHPDAFKSPELKGRWGGYAKILADGLVEIQDKKAQESTRTLGSVKGGSGGYQPGLISANNSECFLCSVHPGRTLDHVGGPDACETSEAC-DADNPVDAYVQAQGLTNL--------NIMPPPGALPGVSGWA--------NASLADTWLLWSELVVYCQHRDPGED-DASIERDCLTKEYVTEVLKSFIALNATDGTEYQITLSQGGLHPVATLSTFHLEHEDSAMSELRSRLAPAWNPDCQGWTKFDVQVTASESEAEQHLLDVFEEFYEDPTDLRLTLIENWDPSEDIQPCGAVMTEKAEHRFPSIETMPAFRPSLTGS--LGPDVTIADGVSITPPRTLVPGETYKVYVQNFPAGTKIILKLLAGLEQDGPVVDTIESFDD-DGISELAWTAPRDVD-----FSPKKYYLQATPAAFPVLFGNSQVFSFQDVADARKPRRRM 693          
BLAST of NO04G04160 vs. NCBI_GenBank
Match: XP_005854415.1 (hypothetical protein NGA_0231400, partial [Nannochloropsis gaditana CCMP526] >EKU21941.1 hypothetical protein NGA_0231400, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 152.5 bits (384), Expect = 7.700e-33
Identity = 74/180 (41.11%), Postives = 109/180 (60.56%), Query Frame = 0
Query:  176 AGNVICYPKNGTEVVSMSEGKSPCTIIVLTRSNTDPYHIPQMMNITTSKIIVGNPIDLPVLNATNKIERLFRVYPGGRLDVRFASLYRGAGWTSKDGRSTVTVGGVTYVDFGGSFTATGCLFLAQRQTVESFLSELPKMFTHRRRLYGGVIFVAGGQLYLQGCTFIRFRPLGNPFLNSVQ 356
            AG  +CYP+NG E+  M+E  S C++I+L + ++D Y +P  + +T+ KI++G+PIDLP ++  N + RLF V PGG LD+RF SL+R +     D   +V V GV  V+ GG    T C+F    QT E F+  L   F  R+R+ GG + V GG  +  GC  +R+ P G+P +N VQ
Sbjct:  156 AGLQVCYPQNGEELKGMTESGSSCSVIILKKGSSDKYTLPSTVIVTSRKIVLGHPIDLPQIHPDNGVYRLFEVKPGGSLDIRFVSLFRPSP-RKVDDNLSVIVAGVALVELGGYMRGTACIFRQPAQTFEGFVKSLETPFA-RKRIVGGFVLVLGGTFFCYGCQAVRWAPYGSPNVNVVQ 333          
BLAST of NO04G04160 vs. NCBI_GenBank
Match: EWM25323.1 (hypothetical protein Naga_100281g10 [Nannochloropsis gaditana])

HSP 1 Score: 151.4 bits (381), Expect = 1.700e-32
Identity = 73/180 (40.56%), Postives = 110/180 (61.11%), Query Frame = 0
Query:  176 AGNVICYPKNGTEVVSMSEGKSPCTIIVLTRSNTDPYHIPQMMNITTSKIIVGNPIDLPVLNATNKIERLFRVYPGGRLDVRFASLYRGAGWTSKDGRSTVTVGGVTYVDFGGSFTATGCLFLAQRQTVESFLSELPKMFTHRRRLYGGVIFVAGGQLYLQGCTFIRFRPLGNPFLNSVQ 356
            AG  +CYP+NG E+  M+E  S C++I+L + ++D Y +P  + +T+ KI++G+PIDLP ++   ++ RLF V PGG LD+RF SL+R +     D   +V V GV  V+ GG    T C+F    QT E+F+  L   F  R+R+ GG + V GG  +  GC  +R+ P G+P +N VQ
Sbjct:  156 AGLQVCYPQNGEELKGMTESGSSCSVIILKKGSSDKYTLPSTVIVTSRKIVLGHPIDLPQIHPDKEVYRLFEVKPGGSLDIRFVSLFRPSP-RKVDENLSVIVAGVALVELGGYMRGTACIFRQPAQTFEAFVKSLETPFA-RKRIVGGFVLVLGGTFFCYGCQAVRWAPYGSPNVNVVQ 333          
BLAST of NO04G04160 vs. NCBI_GenBank
Match: XP_005853421.1 (hypothetical protein NGA_0438900, partial [Nannochloropsis gaditana CCMP526] >EKU22940.1 hypothetical protein NGA_0438900, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 144.4 bits (363), Expect = 2.100e-30
Identity = 74/200 (37.00%), Postives = 115/200 (57.50%), Query Frame = 0
Query:  176 AGNVICYPKNGTEVVSMSEGKSPCTIIVLTRSNTDPYHIPQMMNITTSKIIVGNPIDLPVLNATNKIERLFRVYPGGRLDVRFASLYRGAGWTSKDGRSTVTVGGVTYVDFGGSFTATGCLFLAQRQTVESFLSELPKMFTHRRRLYGGVIFVAGGQLYLQGCTFIRFRPLGNPFLNSVQIGRDILIIAGNMALSGVYNL 376
            AG  +CYP+ G E+ +M E  S C++++L + ++  Y +P  + +T+S II+G+PID P ++    + RLF V  G  +D+RF SL+R A   +  G  ++ V G   V  GG F  +G +F  Q QT E F+  L       +R+ GG + VAGG  +  GC  IR+ P G P +N V++GRD L++AG     G Y++
Sbjct:  158 AGLQVCYPETGPELKAMVESGSSCSVVILKKGSSYIYLLPSTVMVTSSVIILGHPIDPPQIHPEKGVYRLFDVAAGSHIDIRFVSLFRPA-LRNVGGNRSLIVAGCVLVRTGGYFRGSGVIFRQQAQTFEGFVKGLMDPLA-PKRIVGGFVLVAGGAFFCYGCQIIRWAPYGAPNINLVEVGRDYLVLAGTSVCIGCYHV 355          
BLAST of NO04G04160 vs. NCBI_GenBank
Match: EWM25326.1 (hypothetical protein Naga_100880g2, partial [Nannochloropsis gaditana])

HSP 1 Score: 144.4 bits (363), Expect = 2.100e-30
Identity = 74/200 (37.00%), Postives = 115/200 (57.50%), Query Frame = 0
Query:  176 AGNVICYPKNGTEVVSMSEGKSPCTIIVLTRSNTDPYHIPQMMNITTSKIIVGNPIDLPVLNATNKIERLFRVYPGGRLDVRFASLYRGAGWTSKDGRSTVTVGGVTYVDFGGSFTATGCLFLAQRQTVESFLSELPKMFTHRRRLYGGVIFVAGGQLYLQGCTFIRFRPLGNPFLNSVQIGRDILIIAGNMALSGVYNL 376
            AG  +CYP+ G E+ +M E  S C++++L + ++  Y +P  + +T+S II+G+PID P ++    + RLF V  G  +D+RF SL+R A   +  G  ++ V G   V  GG F  +G +F  Q QT E F+  L       +R+ GG + VAGG  +  GC  IR+ P G P +N V++GRD L++AG     G Y++
Sbjct:  158 AGLQVCYPETGPELKAMVESGSSCSVVILKKGSSYIYLLPSTVMVTSSVIILGHPIDPPQIHPEKGVYRLFDVAAGSHIDIRFVSLFRPA-LRNVGGNRSLIVAGCVLVRTGGYFRGSGVIFRQQAQTFEGFVKGLMDPLA-PKRIVGGFVLVAGGAFFCYGCQIIRWAPYGAPNINLVEVGRDYLVLAGTSVCIGCYHV 355          
BLAST of NO04G04160 vs. NCBI_GenBank
Match: EWM25479.1 (hypothetical protein Naga_100207g1 [Nannochloropsis gaditana])

HSP 1 Score: 97.4 bits (241), Expect = 3.000e-16
Identity = 65/197 (32.99%), Postives = 101/197 (51.27%), Query Frame = 0
Query:  181 CYPKNGTEVVSMSEGKSPCTIIVLTRSNTDPYHIPQM---MNITTSKIIVGNPIDLPVLNATNKIERLFRVYPGGRLDVRFASLYRGAGWTSKDGRSTVTV--GGVTYVDFGGSFTATGCLFLAQRQTVESFLSELPKMFTHRRRLYGGVIFVAGGQLYLQGCTFIRFRPLGNPFLNSVQIGRDILIIAGNMALSGV 373
            C P++G E+  M+E  S C II L         +P     + I+T K+I+GNPI LP ++  +  +R+F +  GG LD++F   YRG G    +  +T+ V  GG   V+ GG F+A G +F          +   P + +   R++GG +FV GG + +    F   +P G  F     +G D+L++AG   LSGV
Sbjct:  152 CVPQSGMELRQMAEDPSRCAIISLLPGKIYNVALPDSDDDITISTRKVIIGNPISLPTIDGADS-KRIFHIVAGGNLDLQFVRTYRGGG----ELIATIPVLRGGTALVELGGRFSAFGVIFTNAPPVGMPAILIAPDV-SRAVRVFGGQVFVTGGIVTITLSHFWVLQP-GVLFREIYVVGADLLVVAGVAVLSGV 341          
BLAST of NO04G04160 vs. NCBI_GenBank
Match: EWM26817.1 (Pectin lyase fold/virulence factor [Nannochloropsis gaditana])

HSP 1 Score: 88.6 bits (218), Expect = 1.400e-13
Identity = 61/191 (31.94%), Postives = 94/191 (49.21%), Query Frame = 0
Query:  181 CYPKNGTEVVSMSEGKSPCTIIVLTRSNTDPYHIPQMMNITTSKIIVGNPIDLPVLNATNKIERLFRVYPGGRLDVRFASLYRGAGWTSKDGRSTVTVGGVTYVDFGGSFTATGCLFLAQRQTVESFLSELPKMFTHRRRLYGGVIFVAGGQLYLQGCTFIRFRPLGNPFLNSVQIGRDILIIAGNMALSG 372
            C P  G ++ S+ E  S C +I LT      Y + + +++  + +I+G P+ LPV++A + I R F V   GRLD+RF  ++RG      D       GGV ++  GG    TGCL L     V   L  L        RLYGG + +  G L ++ C  +  RP G        +G  IL+++GN+ ++G
Sbjct:  188 CTPDTGVQLRSLVETGS-CPVITLTPGVR--YVLDEEIHVRRAVVIIGRPLTLPVIDA-HLIARAFSVEAKGRLDLRFVKVWRGVPMAVVDEVYLELRGGVAWIREGGEGVFTGCLMLVHDDEVGDVL--LASDLRVTARLYGGFLLLEAGTLRVRDCHMLLQRP-GVLLREVYTVGGYILVVSGNLFMTG 371          
The following BLAST results are available for this feature:
BLAST of NO04G04160 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 16
Match NameE-valueIdentityDescription
EWM24617.11.400e-9837.80hypothetical protein Naga_100926g1 [Nannochloropsi... [more]
XP_005852489.14.000e-9837.72hypothetical protein NGA_0715800 [Nannochloropsis ... [more]
EWM24054.12.300e-6937.15hypothetical protein Naga_100063g15 [Nannochlorops... [more]
EWM23471.11.100e-6630.67hypothetical protein Naga_100428g3 [Nannochloropsi... [more]
XP_005854415.17.700e-3341.11hypothetical protein NGA_0231400, partial [Nannoch... [more]
EWM25323.11.700e-3240.56hypothetical protein Naga_100281g10 [Nannochlorops... [more]
XP_005853421.12.100e-3037.00hypothetical protein NGA_0438900, partial [Nannoch... [more]
EWM25326.12.100e-3037.00hypothetical protein Naga_100880g2, partial [Nanno... [more]
EWM25479.13.000e-1632.99hypothetical protein Naga_100207g1 [Nannochloropsi... [more]
EWM26817.11.400e-1331.94Pectin lyase fold/virulence factor [Nannochloropsi... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL082nonsL082Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL080nonsL080Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR058ncniR058Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR110ngnoR110Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO04G04160.1NO04G04160.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO04G04160.1NO04G04160.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO04G04160 ID=NO04G04160|Name=NO04G04160|organism=Nannochloropsis oceanica|type=gene|length=4188bp
AACCCAGGAGGCGCAAGCAAGTGGCTCCCATGGCTCCCACGCCCGCGCCC
ACCACGGGGGCAGCGACGGCCGTGGCAGGGAGAGTGGAGAATCGCAGCAC
CGAAAAGAGAGGCAGAAGACGGTATCGCGTGGCATTTGCTGTGGCTGGTT
GCATGATGGTGACGGGTGCCATCATCGCCGGGGCTTTGGGCTCGAGCCGG
CCAAGCAAGTCCGCGCCGCCGTCGCCGGCCTCCACGGACAACCATAACAC
CCAAGTCATGTTCGATAACATCTTGGAGTCCTTGTCGGTCCACAACACAT
TCCCAGCACTCGACCCCGCAGCAATGCCGGGGGCAATGAATGAGGCGAGC
AGCATGGCAGGGATGGGAAATTCATTCAATGACACCCAAAAGGGCAGTAG
CAGCAGCAGCGGCAGCAGCAGTAGCAGTAGCGCTTCAGGCTCCGTCCTCG
GAAATATGTTCGGTGGGATCAAAGACATGCTGGTTGGAAACAAAGCAGTG
GGTGATATCGCCCCACCTGGTTCGGTGTCGTCCATAGGGTGGGGACGCCT
GGGTGCGGGAAACGTTATCTGCTACCCCAAGAATGGGACGGAGGTCGTGA
GCATGAGCGAGGGCAAGAGTCCCTGCACCATCATTGTCTTGACGCGCTCC
AACACAGACCCGTACCACATTCCTCAGATGATGAATATTACCACTTCCAA
GATCATTGTCGGCAATCCGATTGATTTGCCCGTTTTAAATGCGACCAACA
AGATTGAGCGTCTGTTCCGCGTATATCCGGGGGGGAGGCTCGACGTCCGT
TTTGCCTCTTTGTATCGAGGCGCTGGATGGACTTCGAAGGATGGAAGATC
GACGGTGACTGTCGGTGGGGTAACCTACGTGGATTTCGGGGGCTCGTTTA
CTGCGACGGGgtaagacgaatggaaaggaggaagggcgggcgggaggaga
gagagaggagagagagagagagagagagagagagagaggatggaggagag
gacgaatgtaagtatttgatgcacttgtgtggtttatatcatagtatgat
cctagggttctgctctcctatctgatgaaatatcttgtctcagaacatga
cgctgttccaaccatcacctcattcaacctctccctttcttcccctcctc
ccttcctccttctctcatcagATGCCTTTTCCTGGCCCAGCGCCAGACAG
TCGAATCATTCTTGAGTGAGTTGCCTAAGATGTTCACGCATCGTAGGCGT
CTGTACGGCGGCGTCATCTTTGTCGCCGGCGGACAACTTTATCTGCAGGG
ATGTACCTTCATTCGGTTTCGGCCCTTGGGAAATCCCTTTTTGAACAGTG
TGCAAATTGGACGAGATATTTTGATTATTGCGGGCAATATGGCTTTGTCG
GGTGTTTATAACCTGAACGTTAATCTATTCGCGAACAACGTGATTTTGGG
CAATATATTGGCAGTCCTGGGGGGCACCGCGGTGTGGGCGGGGGGCGCGG
GGTGTCATGCGACCGGTGTACAGGCGCAGTGGGGCGCAGgtaggagcgtt
aaaaagggacgggtccgtggttgtattggtcgatctatgaatggtggggg
cctggtcaagcggctgcgatgtgtgctcatcctcacttgtcttttgctgg
cctggcgtgacctgctctgctcccactgagttcccaacccttcgagtcaa
gtccttcatagttctcgatgcccacctgacatcctcctccttcgcgccct
tcctccttccaaacagGCCTACAGATGTTCGTTGGGGGCGGTGTCCTGGT
CACTGCAGGGTACAGCCACATATCGGTGAACGGGGCGGTTATGCGCGGGG
GCTTCGGTCTCTTCTCTGTTGGTGGTGGGCTGCACTTACAAACAGGATAC
CTCCAATCCCGGGCGTGGGGTGTTGGTTCCATGAACGTGGCTGGTCAGAC
ATTTTCCGTCGGCGGCGGAATTCATCAAATGATTGGGGGAGCCATCGCCA
CCACCAGTATTGCTAACGTGTTTTTCGGGGCCGGTGGGACGACCTTTGTA
GGCTCGGGACAGCAGCGCTGGATTGGTGTGGTGCAAGCTCGCTCGGCGGT
GGCTCAAACGCAGTATGGTGCTGGTCTTTTCATGTATAATGGGGCGGGAA
CAGTTATCGTTGCTTATGTCACACAGGTCAGTGCGCAAGTGGCCCGCGCG
CAATTTGGCGTGGGGAATGACATCTTTTTGGGGGCTGGATGGTTGTCGAA
TGTGAATACCACAAGGTATGGGGCTCAAGTTGTGAATGCTTTTTTCGGGG
AAGGAAACCAAATCTATGTTGGGGCTGGTGGCGCGGTAATCATTAGGTGT
TTCACCATAACCTTCCGCGGATATGGCTTCTCGACGACGAAAAATTTGTA
CACGATTGCGGGGACGGGCGTGTCACGCACGCAAGCGCTGAAGAATGTGG
TAGTAACGAAGGCGGGACAAACACTATTGCCCTGGCAGCAATCACCCCGG
CCCAAGCGGAGAGACCTCGAGAATGAGGTGGGTGGAGAGGAAGATTCAGA
GGTTGAGATTGGGGTGTTTGATAGTGCGCGAAATGCTTATATGGATGGGG
AGGGCAAGAGTAAGTTGATTGTGATTCAATCGATGTTGGAGGAAGGGAAG
CAGGTTGTGATTGAGGACGCGACACCCTTTGAGGCCAAGGAGCTGAAGCA
CTACTGGGGGGGGTTAGCGCAAATATTGGCCGATGGTGCGGTGACACGGG
GAAGGGGGAAAGTGCTGAACACGACCAAAGGGATGATTTATGTGAATAAC
ACGAATTGTTTTGTTTGTTCCGTAGGACCGGGCACTTCGGCTGAGCATAT
GACAGGACCGTCTTCATGTGTGGTTTCTGATGCGTGTTCAGAGGCGGAGA
CGCCTGCGGCGGCATTTGCTTCAGCGAAGGAAGCAGCAAATGTCGCAGCT
GCAGAAGCAGAAGGTGATGACGTGAAGCCTTTTGACCTGTCTTTTCCCGG
GATGGGTGCTGGAAGTTTGCATAGAGAGTTGACAGAGAGGGAGATTGAGT
TACCGGACGTCTGGATGCTATGGCATGAGATGACTGTGTATTGCCGCACG
ACTGATCCGAGTCTCGATACGCAGGGCATAATCGATGAGGGCTGTGTGAG
CGAGAATTATGTCAAGGATATTGTACGGGGCTATCTCGGACCGACATACG
CACAGGATGATTACCAGCTGGCCGTGGCTTCTGCAAATGTGCATGATGCG
ATCAAAGCGCTAGTAGAGGAGCCACTGGCGGCCGCTATGACTCCGGAATG
GAACGCAGACTGTGAGGGCTGGACAAAATTCAACATATATATTACGGCAT
CTGACCCCGTGATAGAGGAGGCATTGACGGAGGAATGGGAGGCAATTGTC
GATAACCCCTTGGACTTCCAGATAACGCTGCTGCAGAATTACGATGCCAC
AGCGAAGATCACGCCTTGCTCTCTGTCTATCAAGCGGGTTGGTACGGCTA
AGTACCCTAGCCTTCAAAATATGAAGGGCTTCAAGCCCCTGAAGAACGGA
ATGTCTCTGATTGGTCCCAGCTTGACGGTGGCTGCCGAAGCAGCCATTGT
GCCCGTGACTGAGCTGGTCGAAGGGCAGACTTACAAGCTGTATGTCCAGA
ACTTTATGAAGAGCAGTCAGGTTAATGTGTTTTTGATTAAGGGATTAGAG
AGGACCGGACCGATGGTGGCGACGATTGCGGATTTCGATGATAAGGAGGG
TATGGTGGAGTTGGAGTGGATGGCGCCGGTAGGGTTGGAGGGGGCTAGCA
ACAGCGGGAATGAGCAGAAGTATTACTTGACAGCTAGCGTGGGGAACCTC
CCGGCGTTGTTCGCAAATTCACAGGCGTTTACGATAGTGCCGGTGGCTTC
TGCTGCACGTAAAGAGCGACGTATGTGAGAAATGACGAATAATGTGAATA
CGATTATAGTAACAAATAGATTGAGATCGTGGAGGAAGGAATAAATTGCC
AAAGGAATTGCAGGGACGCTGACATGAAGAATCACTGAGATTGACAAATA
TCCCGCACAGTGAACGTGCGCTACGTCACCAAAAGATAAAATAAGACAAA
AAGTCCGTGGGAAGTTTTCAGAAGCCAAATGTCGACAACAAAAAGCAACC
AAAGTACTACTGCAATTAATAAGTCAAAAGCGTGAAGA
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protein sequence of NO04G04160.1

>NO04G04160.1-protein ID=NO04G04160.1-protein|Name=NO04G04160.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1137bp
MAPTPAPTTGAATAVAGRVENRSTEKRGRRRYRVAFAVAGCMMVTGAIIA
GALGSSRPSKSAPPSPASTDNHNTQVMFDNILESLSVHNTFPALDPAAMP
GAMNEASSMAGMGNSFNDTQKGSSSSSGSSSSSSASGSVLGNMFGGIKDM
LVGNKAVGDIAPPGSVSSIGWGRLGAGNVICYPKNGTEVVSMSEGKSPCT
IIVLTRSNTDPYHIPQMMNITTSKIIVGNPIDLPVLNATNKIERLFRVYP
GGRLDVRFASLYRGAGWTSKDGRSTVTVGGVTYVDFGGSFTATGCLFLAQ
RQTVESFLSELPKMFTHRRRLYGGVIFVAGGQLYLQGCTFIRFRPLGNPF
LNSVQIGRDILIIAGNMALSGVYNLNVNLFANNVILGNILAVLGGTAVWA
GGAGCHATGVQAQWGAGLQMFVGGGVLVTAGYSHISVNGAVMRGGFGLFS
VGGGLHLQTGYLQSRAWGVGSMNVAGQTFSVGGGIHQMIGGAIATTSIAN
VFFGAGGTTFVGSGQQRWIGVVQARSAVAQTQYGAGLFMYNGAGTVIVAY
VTQVSAQVARAQFGVGNDIFLGAGWLSNVNTTRYGAQVVNAFFGEGNQIY
VGAGGAVIIRCFTITFRGYGFSTTKNLYTIAGTGVSRTQALKNVVVTKAG
QTLLPWQQSPRPKRRDLENEVGGEEDSEVEIGVFDSARNAYMDGEGKSKL
IVIQSMLEEGKQVVIEDATPFEAKELKHYWGGLAQILADGAVTRGRGKVL
NTTKGMIYVNNTNCFVCSVGPGTSAEHMTGPSSCVVSDACSEAETPAAAF
ASAKEAANVAAAEAEGDDVKPFDLSFPGMGAGSLHRELTEREIELPDVWM
LWHEMTVYCRTTDPSLDTQGIIDEGCVSENYVKDIVRGYLGPTYAQDDYQ
LAVASANVHDAIKALVEEPLAAAMTPEWNADCEGWTKFNIYITASDPVIE
EALTEEWEAIVDNPLDFQITLLQNYDATAKITPCSLSIKRVGTAKYPSLQ
NMKGFKPLKNGMSLIGPSLTVAAEAAIVPVTELVEGQTYKLYVQNFMKSS
QVNVFLIKGLERTGPMVATIADFDDKEGMVELEWMAPVGLEGASNSGNEQ
KYYLTASVGNLPALFANSQAFTIVPVASAARKERRM*
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Synonyms
Publications