NO04G04150, NO04G04150 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO04G04150 vs. NCBI_GenBank
Match: EWM24065.1 (hypothetical protein Naga_100063g14 [Nannochloropsis gaditana]) HSP 1 Score: 147.1 bits (370), Expect = 8.400e-32 Identity = 91/268 (33.96%), Postives = 141/268 (52.61%), Query Frame = 0 Query: 26 KKTGLFQRLTQALQS------DGSNAQEELNAAVSGLTDTGLPDAPFLQ---------DTWAQDDDGLSLIKPAFDGDVLSVFRTLTENYKDQLQEIWGQPEVAKALLTNFPMFSGIKGMASIAQ---KEGPLTSADGLSALSAFTDYLAATARVLEEVMDPGKFAAKMQTYQSLKDPVLKDLVARTEKGDVEATLALQQEIVNRELGDIIDLEAFGIRGLEPAAVSSLRNMIKDTEPALYKLILTDDKIAQKFMDDPSAAYREAQAL 276 KKTGLFQR+++AL + DG+ +E+ A D G P P L D W + DDGL +++ + DGD+ + R L KD L W P V +AL+T P+F K + I + ++ + DG+ A F ++ + VL+ + DP KFAAK+Q Y KD L DL A+ +G+ E + + +ELGD+IDL+ G G+EP+ + RN +K+ P +Y ++TD + +K+M+DP A E + L Sbjct: 47 KKTGLFQRISRALDTGSAMDDDGTPFTDEMWEAT---RDEGEPVDPALMDFKNPVERTDAW-KFDDGLKMLQTSMDGDLTNPVRDLVNGAKD-LHAAWAVPHVFRALVTQVPLFQAFKPIQEIIKDKSRDEDYSPEDGVKAAGIFKSFMLRSMDVLDTLRDPEKFAAKLQGYAESKDKTLLDLFAKASRGEDENHKEINNFFMRQELGDVIDLDFLGFSGVEPSFLPGFRNQVKEFAPNMYNALMTDPNM-KKYMEDPFKAVEEGKEL 308
BLAST of NO04G04150 vs. NCBI_GenBank
Match: XP_005854419.1 (hypothetical protein NGA_0231800 [Nannochloropsis gaditana CCMP526] >EKU21945.1 hypothetical protein NGA_0231800 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 111.7 bits (278), Expect = 3.900e-21 Identity = 81/280 (28.93%), Postives = 134/280 (47.86%), Query Frame = 0 Query: 14 LLAFVVGPATA------NKKTGLFQRLTQALQSDGSNAQEELNAAVSGLTDTGLPDAPFLQDTWAQDDDGLSLIKPAFDGDVLSVFRTLTENYKDQLQEIWGQPEVAKALLTNFPMFSGIKGMASIAQKEGPL-TSADGLSALSAFTDYLAATARVLEEVMDPGKFAAKMQTYQSLKDPV-----------------LKDLVARTEKGDVEATLALQQEIVNRELGDIIDLEAFGIRGLEPAAVSSLRNMIKDTEPALYKLILTDDKIAQKFMDDPSAAY 270 ++A ++G TA KK G QR+ + + +D + A T T + +QD+W+ D LS + +GD + ++ ++QEI+ PEV+ LL FPMF + G+ ++ K L T AD LS L ++ ++++ + ++++ DP A MQ Y PV + +LV R E+GD EAT L I + G+ IDL F +G EP A+ LR ++ EP ++ LI +D + +K + DPS + Sbjct: 5 VIALLIGAVTACHAAESEKKGGPMQRVKRMMATDATAA-----------TSTSAGEEEDIQDSWS-FDSVLSGARRLINGDHAGILADMSMG--KEMQEIFENPEVSYQLLQVFPMFKVLNGVKELSAKPKELFTKADSLSVLESYRNFVSTAIKNMKDMADPVGMATTMQKYSDAMSPVTQNPDGSHRALTEEERRMTELVRRVEEGDPEATGQLHDRIADSLWGNTIDLSEF--KGKEPEALKVLREIVMKEEPKVFDLITGEDPLVRKVLSDPSMLF 268
BLAST of NO04G04150 vs. NCBI_GenBank
Match: XP_005854650.1 (hypothetical protein NGA_0195700 [Nannochloropsis gaditana CCMP526] >EKU21707.1 hypothetical protein NGA_0195700 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 110.2 bits (274), Expect = 1.100e-20 Identity = 60/175 (34.29%), Postives = 91/175 (52.00%), Query Frame = 0 Query: 102 DQLQEIWGQPEVAKALLTNFPMFSGIKGMASIAQKEGPLTSADGLSALSAFTDYLAATARVLEEVMDPGKFAAKMQTYQSLKDPVLKDLVARTEKGDVEATLALQQEIVNRELGDIIDLEAFGIRGLEPAAVSSLRNMIKDTEPALYKLILTDDKIAQKFMDDPSAAYREAQALS 277 D+L+ W P V + L P K + + KE LT DG+ A+ F + + +E V DP A M Y +L+DP L+AR + G+ EA L LQQ I++RELG +IDL G G EP+ + R ++ EP L+ I ++D IA+K+M+ P ++ L+ Sbjct: 9 DELKATWSDPVVFRFLRDQTPFLKAFKPLRPLFSKEA-LTPQDGVDAVETFKNAMLKVLATIEAVRDPEGMATLMFNYSNLQDPEWVSLIARLQAGEKEAQLELQQYILDRELGGLIDLNEMGFDGQEPSILKEARETVQREEPELWDSIFSEDPIARKYMEAPETVLKDVMDLT 182
BLAST of NO04G04150 vs. NCBI_GenBank
Match: EWM20107.1 (hypothetical protein Naga_101770g1 [Nannochloropsis gaditana]) HSP 1 Score: 79.7 bits (195), Expect = 1.600e-11 Identity = 39/107 (36.45%), Postives = 68/107 (63.55%), Query Frame = 0 Query: 176 MQTYQSLKDPVLKDLVARTEKGDVEATLALQQEIVNRELGDIIDLEAFGIRGLEPAAVSSLRNMIKDTEPALYKLILTDDKIAQKFMDDPSAAYREAQALSPSLAEA 283 M Y + D + L+ R EKGD A+L +QQ ++N+E+GD+IDLEAFG G+ P +S + +++ EP ++ +L+ D +A+++++DP A +EA ++ EA Sbjct: 1 MYNYATSTDSKWRSLLERVEKGDKTASLDMQQFLLNKEIGDLIDLEAFGFGGVLPDVLSKAISSVREQEPLIWNSVLS-DPVAKRYLEDPMLAVKEALDVAKDYGEA 106
BLAST of NO04G04150 vs. NCBI_GenBank
Match: EWM25317.1 (hypothetical protein Naga_100281g8 [Nannochloropsis gaditana]) HSP 1 Score: 68.9 bits (167), Expect = 2.900e-8 Identity = 50/183 (27.32%), Postives = 89/183 (48.63%), Query Frame = 0 Query: 14 LLAFVVGPATA------NKKTGLFQRLTQALQSDGSNAQEELNAAVSGLTDTGLPDAPFLQDTWAQDDDGLSLIKPAFDGDVLSVFRTLTENYKDQLQEIWGQPEVAKALLTNFPMFSGIKGMASIAQKEGPL-TSADGLSALSAFTDYLAATARVLEEVMDPGKFAAKMQTYQSLKDPVLKD 190 ++A ++G TA KK G QR+ + + +D + A T T + +QD+W+ D LS + +GD + ++ ++QEI+ PEV+ LL FPMF + G+ ++ K L T AD LS L ++ ++++ + ++++ DP A MQ Y PV ++ Sbjct: 5 VIALLIGAVTACHAAESEKKGGPMQRVKRMMATDATAA-----------TATSAGEEEDIQDSWS-FDSVLSGARRLINGDHAGILADMSMG--KEMQEIFENPEVSYQLLQVFPMFKVLNGVKELSAKPKELFTKADSLSVLESYRNFVSTAIKNMKDMADPVGMATTMQKYSDAMSPVTQN 173 The following BLAST results are available for this feature:
BLAST of NO04G04150 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 5
Relationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO04G04150 ID=NO04G04150|Name=NO04G04150|organism=Nannochloropsis oceanica|type=gene|length=2373bpback to top protein sequence of NO04G04150.1 >NO04G04150.1-protein ID=NO04G04150.1-protein|Name=NO04G04150.1|organism=Nannochloropsis oceanica|type=polypeptide|length=294bpback to top Synonyms
Publications
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