NO04G04140, NO04G04140 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO04G04140 vs. NCBI_GenBank
Match: EWM28810.1 (Phosphatidate cytidylyltransferase [Nannochloropsis gaditana]) HSP 1 Score: 256.1 bits (653), Expect = 1.300e-64 Identity = 170/334 (50.90%), Postives = 206/334 (61.68%), Query Frame = 0 Query: 13 LLLLVAVTST-----SALGSSRTTTAFIPPRPRSFSPSSALSLSIKSRTL-TPPRHALSTPPPQAAWRPFPTCSHALPSNLLQDLSGATLVGIASAVWLKLWTTLATS-----------------------------DPSARFFAAAVPLLQAIAVIASGLAKEQPDAPTLTNATTIKMKPSGL------VAAISRSGNPAEVLRGPLIYVIVLLLSTLSFWRESMVGLVAISQMAAGDGMADIVGRRWGEKKWAFSSTKSYAGTGAFVVSGFLVSVGLIAWFHLWGLVPALTLGVVGRVGVISVLCAMVELVPWGDDNVSVPVVASVLATALL 306 LLL V+V+S S G +T PRP SP S+ S + S L T P + + + F T ALP QDL GA LVG+ASAVWLKLWT+LA S + +AR FAA VPLLQ +A+IASGLAK A N + I+ S + PAEVLRGPLIYV++LLL+T+ FWRES+VGLVA++QMAAGDGMADIVGRRWG +KW+FSSTKSYAG+ AF +SGF+VSV LIAWF+ WGLVPALT GV +V +IS+LCA VELVPWGDDN+ VP+VAS LA+ LL Sbjct: 14 LLLFVSVSSNTVKPFSFPGIRKTAFVAQQPRPSRLSPLSSRSYAPSSPALFTIPHTSGIVSIRKVSNVRFLTPLLALPPATAQDLGGAALVGMASAVWLKLWTSLAISGAIDSKDSRKLIHCGSGPLFLLCWPFFSAEGTARLFAAGVPLLQIVAMIASGLAKAPSPA---KNDSGIRAGESAMGXXXXXXXXXXXXXXPAEVLRGPLIYVVILLLATVVFWRESVVGLVAVAQMAAGDGMADIVGRRWGAQKWSFSSTKSYAGSSAFALSGFVVSVALIAWFNFWGLVPALTAGVACKVALISILCAAVELVPWGDDNIFVPMVASALASWLL 344
BLAST of NO04G04140 vs. NCBI_GenBank
Match: XP_005854647.1 (hypothetical protein NGA_2086500 [Nannochloropsis gaditana CCMP526] >EKU21713.1 hypothetical protein NGA_2086500 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 249.6 bits (636), Expect = 1.300e-62 Identity = 166/331 (50.15%), Postives = 199/331 (60.12%), Query Frame = 0 Query: 13 LLLLVAVTST-----SALGSSRTTTAFIPPRPRSFSPSSALSLSIKSRTL-TPPRHALSTPPPQAAWRPFPTCSHALPSNLLQDLSGATLVGIASAVWLKLWTTLATS-----------------------------DPSARFFAAAVPLLQAIAVIASGLAKEQPDAPT---LTNATTIKMKPSGLVAAISRSGNPAEVLRGPLIYVIVLLLSTLSFWRESMVGLVAISQMAAGDGMADIVGRRWGEKKWAFSSTKSYAGTGAFVVSGFLVSVGLIAWFHLWGLVPALTLGVVGRVGVISVLCAMVELVPWGDDNVSVPVVASVLATALL 306 LLL V+V+S S G +T PRP SP S+ S + S L T P + + + F T ALP QDL GA LVG+ASAVWLKLWT+LA S + +AR FAA VPLLQ +A+IASGLAK A AEVLRGPLIYV++LLL+T+ FWRES+VGLVA++QMAAGDGMADIVGRRWG +KW+FSSTKSYAG+ AF +SGF+VSV LIAWF+ WGLVPALT GV +V +IS+LCA VELVPWGDDN+ VP+VAS LA+ LL Sbjct: 14 LLLFVSVSSNTVKPFSFPGIRKTAFVAQQPRPSRLSPLSSRSYAPSSPALFTIPHTSGIVSIRKVSNVRFLTPLLALPPATAQDLGGAALVGMASAVWLKLWTSLAISGAIDSKDSRKLIHCGSGPLFLLCWPFFSAEGTARLFAAGVPLLQIVAMIASGLAKAPSPAKNDXXXXXXXXXXXXXXXXXXXXXXXXXXAEVLRGPLIYVVILLLATVVFWRESVVGLVAVAQMAAGDGMADIVGRRWGAQKWSFSSTKSYAGSSAFALSGFVVSVALIAWFNFWGLVPALTAGVACKVALISILCAAVELVPWGDDNIFVPMVASALASWLL 344
BLAST of NO04G04140 vs. NCBI_GenBank
Match: CBJ48773.1 (Probable phytol kinase, chloroplast precursor, carboxyterminal half [Ectocarpus siliculosus]) HSP 1 Score: 163.3 bits (412), Expect = 1.200e-36 Identity = 111/262 (42.37%), Postives = 141/262 (53.82%), Query Frame = 0 Query: 79 CSHALP----SNLLQDLSGATLVGIASAVWLKLWTTLA-----------------------------TSDPSARFFAAAVPLLQAIAVIASGLAKEQPDAPTLTNATTIKMKPSGLVAAISRSGNPAEVLRGPLIYVIVLLLSTLSFWRESMVGLVAISQMAAGDGMADIVGRRWGEKKWAFSSTKSYAGTGAFVVSGFLVSVGLIAWFHLWGLVPALTLGVVGRVGVISVLCAMVELVP---WGDDNVSVPVVASVLATAL 305 C ALP S L D +T+VG AS VW+KLWT LA T+ P AR FAAAVP+LQA+ + A+GL+ + + + +N LV AISRSG +E L GPL Y + ++L T+ WR S+VGL+A+ QMA GDGMAD+VGR++G+ KW KS G+ AFV FL SV +I WFH +GL+ R IS A VEL P GDDN+SVPV A VL L Sbjct: 53 CVCALPPPGISPLAWDAGVSTVVGAASIVWVKLWTGLARRDKMKPQVSRKVVHTTAAPLFMILWPFFTNRPCARLFAAAVPMLQAVRLAAAGLSGDPENNDSSSNE---------LVKAISRSGKASETLDGPLKYSLAIVLITVVEWRTSVVGLIAMMQMAVGDGMADLVGRQFGKHKWRKGGEKSMEGSAAFVSGSFLASVAMIQWFHHFGLLSVTPTEAAARAAAISFASAAVELFPPRLVGDDNISVPVTALVLGRLL 305
BLAST of NO04G04140 vs. NCBI_GenBank
Match: NP_001239775.1 (probable phytol kinase 1, chloroplastic [Glycine max] >Q2N2K1.1 RecName: Full=Probable phytol kinase 1, chloroplastic; Flags: Precursor >ABA42676.1 phytol kinase [Glycine max] >KRH34703.1 hypothetical protein GLYMA_10G200500 [Glycine max]) HSP 1 Score: 138.7 bits (348), Expect = 3.100e-29 Identity = 81/219 (36.99%), Postives = 131/219 (59.82%), Query Frame = 0 Query: 86 NLLQDLSGATLVGIASAVWLKLWTTLATSDPSARFFAAAVPLLQAIAVIASGLAKEQPDAPTLTNATTIKMKPSGLVAAISRSGNPAEVLRGPLIYVIVLLLSTLSFWRESMVGLVAISQMAAGDGMADIVGRRWGEKKWAFSSTKSYAGTGAFVVSGFLVSVGLIAWFHLWGLVPALTLGVVGRVGVISVLCAMVELVPWG---DDNVSVPVVASVLA 302 N+LQ LV I S + + + ++ P AR+FAA VPL+ + ++ +GL+ + GL+ +++R G+P E+LRGPL YV++L+LS L FWRES +G+++++ M AGDG+ADI+GRR+G K ++ KS AG+ + +V GFLVS+G++ ++ + G V + RV IS + +VE +P DDN+SVP+ +A Sbjct: 93 NILQQGLSRKLVHILSGLLFLVSWPIFSNSPKARYFAAFVPLVNCLRLLVNGLSLASDE---------------GLIKSVTREGDPLELLRGPLYYVLILILSALVFWRESPIGVISLAMMCAGDGIADIIGRRYGSMKIPYNEHKSLAGSMSMLVFGFLVSIGMLYYYSVLGHVQLDWASTLPRVAFISFVATLVESLPITKVVDDNISVPLATMAVA 296
BLAST of NO04G04140 vs. NCBI_GenBank
Match: XP_003556292.1 (PREDICTED: probable phytol kinase 1, chloroplastic [Glycine max] >KRG92084.1 hypothetical protein GLYMA_20G190100 [Glycine max]) HSP 1 Score: 138.3 bits (347), Expect = 4.100e-29 Identity = 83/219 (37.90%), Postives = 130/219 (59.36%), Query Frame = 0 Query: 86 NLLQDLSGATLVGIASAVWLKLWTTLATSDPSARFFAAAVPLLQAIAVIASGLAKEQPDAPTLTNATTIKMKPSGLVAAISRSGNPAEVLRGPLIYVIVLLLSTLSFWRESMVGLVAISQMAAGDGMADIVGRRWGEKKWAFSSTKSYAGTGAFVVSGFLVSVGLIAWFHLWGLVPALTLGVVGRVGVISVLCAMVELVPWG---DDNVSVPVVASVLA 302 N+LQ LV I S + + + ++ P AR+FAA VPL+ + ++ +GL+ + GL+ +++R G+P E+LRGPL YV++L+ L FWRES VG+V+++ M AGDG+ADI+GRR+G K ++ KS AG+ + +V GFLVS+G++ ++ + G V V RV IS + +VE +P DDN+SVP+ V+A Sbjct: 89 NILQQGLSRKLVHILSGLLFLVSWPIFSNSPKARYFAAFVPLVNCLRLLVNGLSLASDE---------------GLIKSVTREGDPLELLRGPLYYVLILIFCALVFWRESPVGVVSLAMMCAGDGIADIIGRRYGSLKIPYNQHKSLAGSMSMLVFGFLVSIGMLYYYSVLGHVQLDWASTVPRVAFISFVATLVESLPITKVIDDNISVPLATMVVA 292
BLAST of NO04G04140 vs. NCBI_GenBank
Match: XP_005818786.1 (hypothetical protein GUITHDRAFT_149059 [Guillardia theta CCMP2712] >EKX31806.1 hypothetical protein GUITHDRAFT_149059 [Guillardia theta CCMP2712]) HSP 1 Score: 136.7 bits (343), Expect = 1.200e-28 Identity = 98/252 (38.89%), Postives = 137/252 (54.37%), Query Frame = 0 Query: 99 IASAVWLKLWTTLA---TSDP----------SARFFAAAVPLLQA-----------IAVIASGLAKEQPDAPTLTNATTI-------------KMKPSGLVAAISRSGNPAEVLRGPLIYVIVLLLSTLSFWRESMVGLVAISQMAAGDGMADIVGRRWGEKKWAFSSTKSYAGTGAFVVSGFLVSVGLIAWFHLWGLVPALTLGVVGRVGVISVLCAMVELVP--------WGDDNVSVPVVASVLATALL 306 + + WL +W+ LA DP S F PL + ++V ++ + E P PT+ NA + + + SGLV AISRSG EV++GPLIY +VLL + W+++M + AI+QMAAGDG+ADIVGRRWG KW +S +KS AG+ FVV +V + + WF+ +GL+ V +V +IS+LCA VEL+P GDDNV+VP VA+VLA LL Sbjct: 51 VGAGAWLAIWSNLAKYGMIDPKVSRKIVHCGSGPLFLLTWPLFSSSHTAPLLASIGLSVQSAADSDELPAVPTI-NALRLAGEEEGRGESDGRRRRDSGLVTAISRSGRSEEVMQGPLIYTLVLLWGVVGGWQQAM-SITAITQMAAGDGLADIVGRRWGVVKWPWSDSKSIAGSLGFVVGASVVMMAELLWFNAFGLLSFKGTEVYDKVILISLLCAAVELIPLDKVLPGRLGDDNVTVPAVAAVLALLLL 300
BLAST of NO04G04140 vs. NCBI_GenBank
Match: XP_016565088.1 (PREDICTED: probable phytol kinase 1, chloroplastic [Capsicum annuum] >PHT86491.1 Phytol kinase 1, chloroplastic [Capsicum annuum]) HSP 1 Score: 136.3 bits (342), Expect = 1.500e-28 Identity = 84/219 (38.36%), Postives = 128/219 (58.45%), Query Frame = 0 Query: 86 NLLQDLSGATLVGIASAVWLKLWTTLATSDPSARFFAAAVPLLQAIAVIASGLAKEQPDAPTLTNATTIKMKPSGLVAAISRSGNPAEVLRGPLIYVIVLLLSTLSFWRESMVGLVAISQMAAGDGMADIVGRRWGEKKWAFSSTKSYAGTGAFVVSGFLVSVGLIAWFHLWGLVPALTLGVVGRVGVISVLCAMVELVP---WGDDNVSVPVVASVLA 302 NL++ LV I S + + ++ AR+FA+ VPL + ++ GL+ + GL+ +++R G P E+LRGPL YV+VL+LS + FWRES VG+V+++ M GDG+ADIVGRR+G K ++ KS+AG+ + V GFLVS+G++ +F G + V RV V+S + MVE +P DDN+SVP+V+ V+A Sbjct: 99 NLIEQNLSRKLVHIMSGLLFMASWPIFSASRWARYFASVVPLTNCLRLVTHGLSLATDE---------------GLIKSVTREGKPEELLRGPLYYVLVLILSAVLFWRESPVGVVSLAMMCGGDGIADIVGRRFGSTKIPYNKQKSWAGSLSMFVFGFLVSIGMLYYFSALGYFHLDWVSTVERVAVVSFVATMVESLPITGTVDDNISVPLVSMVVA 302
BLAST of NO04G04140 vs. NCBI_GenBank
Match: EPS60714.1 (phytol kinase, partial [Genlisea aurea]) HSP 1 Score: 136.0 bits (341), Expect = 2.000e-28 Identity = 78/210 (37.14%), Postives = 134/210 (63.81%), Query Frame = 0 Query: 99 IASAVWLKLWTTLATSDPSARFFAAAVPLLQAIAVIASGLAKEQPDAPTLTNATTIKMKPSGLVAAISRSGNPAEVLRGPLIYVIVLLLSTLSFWRESMVGLVAISQMAAGDGMADIVGRRWGEKKWAFSSTKSYAGTGAFVVSGFLVSVGLIAWFHLWGLVPALTLGVVGRVGVISVLCAMVELVPWG---DDNVSVPVVASVLATALL 306 ++ ++L W +TS AR+ A+ VP + + ++ +GL+ + +A L+A++SR G P E+LRGPL YV+VL+L T+SFWR+S VG++++S M AGDG+ADIVGRR+G K +++ KS+AG+ + + GFLVS+G++ ++ + G + + + V ++SV+ +VE +P DDN+SVP ++S++ + LL Sbjct: 48 LSGLLFLAAWPIFSTS-TGARYLASLVPTMNFLRLLLNGLSLTKDEA---------------LIASVSREGKPEELLRGPLYYVVVLMLCTISFWRDSPVGIISLSMMCAGDGIADIVGRRFGNVKIPYNADKSWAGSVSMFLFGFLVSIGMLYYYWILGYIELEWIQTIENVALVSVVATVVESLPTKSTLDDNISVP-LSSIITSLLL 240
BLAST of NO04G04140 vs. NCBI_GenBank
Match: XP_019196891.1 (PREDICTED: probable phytol kinase 1, chloroplastic [Ipomoea nil]) HSP 1 Score: 136.0 bits (341), Expect = 2.000e-28 Identity = 84/221 (38.01%), Postives = 132/221 (59.73%), Query Frame = 0 Query: 86 NLLQDLSGATLVGIASA-VWLKLWTTLATSDPSARFFAAAVPLLQAIAVIASGLAKEQPDAPTLTNATTIKMKPSGLVAAISRSGNPAEVLRGPLIYVIVLLLSTLSFWRESMVGLVAISQMAAGDGMADIVGRRWGEKKWAFSSTKSYAGTGAFVVSGFLVSVGLIAWFHLWGLVPALTLGVVGRVGVISVLCAMVELVPWG---DDNVSVPVVASVLAT 303 NL+ LV I S +++ W +TS AR+FA+ VP+L + ++ +GL + GL+ +++R GNP E+LRGPL YV+VL+L + FWRES VG+V+++ M GDG+ADIVGRR+G K ++ KS+AG+ + V GFL+S+G++ +F G + V RV V+S++ +VE +P DDN+SVP+V+ + A+ Sbjct: 96 NLIPQSLSRKLVHILSGLLFMACWPIFSTS-KGARYFASIVPILNCLRLLVNGLRFADDE---------------GLIKSVTREGNPEELLRGPLYYVMVLILCAVVFWRESPVGVVSLAMMCGGDGVADIVGRRFGSVKIPYNQQKSWAGSISMFVFGFLISLGMLCYFSALGYFHLDWIPTVERVVVVSLVATVVESLPTNGAVDDNISVPLVSMITAS 300
BLAST of NO04G04140 vs. NCBI_GenBank
Match: PHT52790.1 (putative phytol kinase 1, chloroplastic [Capsicum baccatum]) HSP 1 Score: 136.0 bits (341), Expect = 2.000e-28 Identity = 84/220 (38.18%), Postives = 129/220 (58.64%), Query Frame = 0 Query: 86 NLLQDLSGATLVGIASAVWLKLWTTLATSDPSARFFAAAVPLLQAIAVIASGLAKEQPDAPTLTNATTIKMKPSGLVAAISRSGNPAEVLRGPLIYVIVLLLSTLSFWRESMVGLVAISQMAAGDGMADIVGRRWGEKKWAFSSTKSYAGTGAFVVSGFLVSVGLIAWFHLWGLVPALTLGVVGRVGVISVLCAMVELVP---WGDDNVSVPVVASVLAT 303 NL++ LV I S + + ++ AR+FA+ VPL + ++ GL+ + GL+ +++R G P E+LRGPL YV+VL+LS + FWRES VG+V+++ M GDG+ADIVGRR+G K ++ KS+AG+ + V GFLVS+G++ +F G + V RV V+S + MVE +P DDN+SVP+V+ V+A+ Sbjct: 99 NLIEQNLSRKLVHIISGLLFMASWPIFSASRWARYFASVVPLTNCLRLVTHGLS---------------LVTDEGLIKSVTREGKPEELLRGPLYYVLVLILSAVLFWRESPVGVVSLAMMCGGDGIADIVGRRFGSTKIPYNKQKSWAGSLSMFVFGFLVSIGMLYYFSALGYFHLDWVSTVERVAVVSFVATMVESLPITGTVDDNISVPLVSMVVAS 303 The following BLAST results are available for this feature:
BLAST of NO04G04140 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO04G04140 ID=NO04G04140|Name=NO04G04140|organism=Nannochloropsis oceanica|type=gene|length=1008bpback to top protein sequence of NO04G04140.1 >NO04G04140.1-protein ID=NO04G04140.1-protein|Name=NO04G04140.1|organism=Nannochloropsis oceanica|type=polypeptide|length=307bpback to top Synonyms
Publications
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