NO04G04020, NO04G04020 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO04G04020 vs. NCBI_GenBank
Match: EWM28754.1 (g-protein beta subunit 1 [Nannochloropsis gaditana]) HSP 1 Score: 385.6 bits (989), Expect = 1.700e-103 Identity = 235/285 (82.46%), Postives = 249/285 (87.37%), Query Frame = 0 Query: 7 SLAERIEQAKTKAQTLKTEIEEIRKQKDNATLPGAARSQSLPKFEDKMPRVRRVLKGHFGKVYSMHWAHDGTQLISASQDGKLIIWNAHTTNKNQSISLRSSWVMTCCFEQTTGSLVACGGLDNVCSVYRVGGPGSSASSSAAAQSAVRPAHELMAHDGYLSCCRFLDEGSLLTSSGDSTCIFWDVEKNEAITSFADHGGDVMSLSVLPSVSRQVFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNAVGTGSDDSTCRLFDLRSYGEVNVFGNDK 292 SL +RIEQAK KAQTLK EIEE+RKQKDNA LPGAA +Q LP F++K+ R+RR+LKGHFGKVYSMHWA TQL+SASQDGKLIIWNAHTTNK QSI LRSSWVMTCCFEQT G+LVACGGLDNVCSVYRV GPG A SS QSA+RPAHEL+AHDGYLSCCRF+DE SLLTSSGDSTCIFWDVEKNEAITSFADHGGDVMSLSVLPS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX SDDSTCRLFD+RSYG VNVFGNDK Sbjct: 728 SLGDRIEQAKCKAQTLKKEIEEVRKQKDNAMLPGAANNQQLPDFKNKIIRIRRILKGHFGKVYSMHWAQKSTQLVSASQDGKLIIWNAHTTNKVQSIPLRSSWVMTCCFEQTNGALVACGGLDNVCSVYRVSGPGMPAPSSPTGQSAIRPAHELIAHDGYLSCCRFIDEQSLLTSSGDSTCIFWDVEKNEAITSFADHGGDVMSLSVLPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDSTCRLFDIRSYGAVNVFGNDK 1012
BLAST of NO04G04020 vs. NCBI_GenBank
Match: CBJ48797.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 268.5 bits (685), Expect = 3.100e-68 Identity = 178/288 (61.81%), Postives = 210/288 (72.92%), Query Frame = 0 Query: 6 SSLAERIEQAKTKAQTLKTEIEEIRKQKDNATLPGAARSQSLPKFEDKMPRVRRVLKGHFGKVYSMHWAHDGTQLISASQDGKLIIWNAHTTNKNQSISLRSSWVMTCCFEQTTGSLVACGGLDNVCSVYRVGGPGSSASSSAAAQSAVRPAHELMAHDGYLSCCRFLDEGSLLTSSGDSTCIFWDVEKNEAITSFADHGGDVMSLSVLPSVSRQVFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNAVGTGSDDSTCRLFDLRSYGEVNVFGNDKIV 294 + + ER+ A+ KA+ LK+EI + + K + ++ AA L + + RRVLKGHFGKVY+MHW+ D L+SASQDGKLIIWN +TTNK Q+I LRSSWVMTC FE T G VACGGLDN+CS+Y +G + +R EL AHDGYLSCCRF+++ S+LTSSGDSTCI WDVE F DHGGDVMS+S+LPS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG A GTGSDDS+CRLFD+R YGE N FGNDKI+ Sbjct: 2 ADMTERLAVARKKAEALKSEIAKAQNDKKDCSIQEAAAQIDLKNLGPGL-KARRVLKGHFGKVYAMHWSGDNQNLVSASQDGKLIIWNGYTTNKVQAIPLRSSWVMTCAFEPTQGRFVACGGLDNLCSIYELG-----------QSTVMRATRELAAHDGYLSCCRFVNQESILTSSGDSTCIIWDVEMGVTTAHFTDHGGDVMSVSILPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKAFGTGSDDSSCRLFDMRCYGEANYFGNDKIL 277
BLAST of NO04G04020 vs. NCBI_GenBank
Match: XP_002293634.1 (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >EED89370.1 predicted protein, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 262.7 bits (670), Expect = 1.700e-66 Identity = 174/272 (63.97%), Postives = 211/272 (77.57%), Query Frame = 0 Query: 22 LKTEIEEIRKQKDNATLPGAARSQSLPKF-EDKMPRVRRVLKGHFGKVYSMHWAHDGTQLISASQDGKLIIWNAHTTNKNQSISLRSSWVMTCCFEQTTGSLVACGGLDNVCSVYRVGGPGSSASSSAAAQSAVRPAHELMAHDGYLSCCRFLDEGSLLTSSGDSTCIFWDVEKNEAITSFADHGGDVMSLSVLPSVSRQVFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNAVGTGSDDSTCRLFDLRSYGEVNVFGNDKI 293 LK++IE+ R K N+T+ A S+SL + ++RR LKGHFGKVY+MHW D L+SASQDGKLIIWNA TTNK Q+I LRSSWVMTC FEQ+ G+L+ACGGLDNVCS+Y ++ A+ S R + EL+AHDGYLSCCRF+DEG ++TSSGDSTCI+WDV E + +F+DH DVMS+++ P + +FXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX A GTGSDD++CRLFD+RSYGEVN F +DKI Sbjct: 2 LKSQIEKARASKQNSTMGSIASSKSLRDIRKPPQTKLRRTLKGHFGKVYAMHWNSDSQTLVSASQDGKLIIWNAFTTNKVQAIPLRSSWVMTCAFEQSKGNLIACGGLDNVCSIY---------NTQQASTSNARASKELVAHDGYLSCCRFVDEGHVVTSSGDSTCIYWDVNSGEVLKTFSDHKSDVMSVAISPE-NNNIFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFGTGSDDASCRLFDMRSYGEVNKFKSDKI 263
BLAST of NO04G04020 vs. NCBI_GenBank
Match: XP_008879352.1 (hypothetical protein H310_13580 [Aphanomyces invadans] >XP_009843691.1 hypothetical protein H257_16817 [Aphanomyces astaci] >ETV66888.1 hypothetical protein H257_16817 [Aphanomyces astaci] >ETV92055.1 hypothetical protein H310_13580 [Aphanomyces invadans]) HSP 1 Score: 257.7 bits (657), Expect = 5.500e-65 Identity = 173/282 (61.35%), Postives = 209/282 (74.11%), Query Frame = 0 Query: 12 IEQAKTKAQTLKTEIEEIRKQKDNATLPGAARSQSLPKFEDKMPRVRRVLKGHFGKVYSMHWAHDGTQLISASQDGKLIIWNAHTTNKNQSISLRSSWVMTCCFEQTTGSLVACGGLDNVCSVYRVGGPGSSASSSAAAQSAVRPAHELMAHDGYLSCCRFLDEGSLLTSSGDSTCIFWDVEKNEAITSFADHGGDVMSLSVLPSVSRQVFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNAVGTGSDDSTCRLFDLRSYGEVNVFGNDKIV 294 + + K K LK +I+ +R K N ++++P P+ RRVLKGHFGK+Y+M W D T L+SASQDGKLI+WNA TTNK Q+I LRSSWVMTC +EQ ++VACGGLDN+CS+Y++G +R EL AHDGYLSCCRFLDE +++TSSGDSTCI WDVE E T+F DH GDVMS+S+ P + + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNA+GTGSDDS+CRLFDLR+YGE+N F NDKI+ Sbjct: 4 VAELKKKCDGLKDKIQSVRTAKSNGGFENDG-TKAIP----PAPKCRRVLKGHFGKIYAMQWGGDSTSLVSASQDGKLIVWNAQTTNKVQAIPLRSSWVMTCAYEQKQRNMVACGGLDNLCSIYQLG-----------QAQVMRATKELAAHDGYLSCCRFLDEANIITSSGDSTCILWDVESGEVKTTFKDHTGDVMSVSINPH-HQNMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNALGTGSDDSSCRLFDLRAYGELNNFSNDKIL 268
BLAST of NO04G04020 vs. NCBI_GenBank
Match: OQR82884.1 (guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta [Achlya hypogyna]) HSP 1 Score: 255.4 bits (651), Expect = 2.700e-64 Identity = 172/282 (60.99%), Postives = 209/282 (74.11%), Query Frame = 0 Query: 12 IEQAKTKAQTLKTEIEEIRKQKDNATLPGAARSQSLPKFEDKMPRVRRVLKGHFGKVYSMHWAHDGTQLISASQDGKLIIWNAHTTNKNQSISLRSSWVMTCCFEQTTGSLVACGGLDNVCSVYRVGGPGSSASSSAAAQSAVRPAHELMAHDGYLSCCRFLDEGSLLTSSGDSTCIFWDVEKNEAITSFADHGGDVMSLSVLPSVSRQVFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNAVGTGSDDSTCRLFDLRSYGEVNVFGNDKIV 294 + + K K + LK +I+ +R QK N ++++P P+ RRVLKGHFGK+Y+M W D + L+SASQDGKLI+WNA TTNK Q+I LRSSWVMTC +EQ ++VACGGLDN+CS+Y +G +R A EL AHDGYLSCCRF+DE +++TSSGDSTCI WDVE E T+F DH GDVMS+++ P + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG A+GTGSDDS+CRLFDLR+YGEVN F NDKI+ Sbjct: 4 VAELKKKCEALKDKIQSVRTQKSNGGFENDG-TKAIP----PAPKCRRVLKGHFGKIYAMQWGGDSSSLVSASQDGKLIVWNAMTTNKVQAIPLRSSWVMTCAYEQKQRNMVACGGLDNLCSIYHLG-----------QAQVMRAAKELAAHDGYLSCCRFIDETNIITSSGDSTCILWDVESGEVKTTFKDHTGDVMSVAINPH-HPNMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTALGTGSDDSSCRLFDLRAYGEVNNFSNDKIL 268
BLAST of NO04G04020 vs. NCBI_GenBank
Match: OQS02095.1 (guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta [Thraustotheca clavata]) HSP 1 Score: 255.0 bits (650), Expect = 3.600e-64 Identity = 172/282 (60.99%), Postives = 208/282 (73.76%), Query Frame = 0 Query: 12 IEQAKTKAQTLKTEIEEIRKQKDNATLPGAARSQSLPKFEDKMPRVRRVLKGHFGKVYSMHWAHDGTQLISASQDGKLIIWNAHTTNKNQSISLRSSWVMTCCFEQTTGSLVACGGLDNVCSVYRVGGPGSSASSSAAAQSAVRPAHELMAHDGYLSCCRFLDEGSLLTSSGDSTCIFWDVEKNEAITSFADHGGDVMSLSVLPSVSRQVFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNAVGTGSDDSTCRLFDLRSYGEVNVFGNDKIV 294 + K K + LK +I+ +R QK N ++++P P+ RRVLKGHFGK+Y+M W D T L+SASQDGKLI+WNA +TNK Q+I LRSSWVMTC +EQ ++VACGGLDN+CS+Y +G +R A EL AHDGYLSCCRF+DE +++TSSGDSTCI WDVE E T+F DH GDVMS+++ P + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG A+GTGSDDS+CRLFDLR+YGEVN F NDKI+ Sbjct: 4 VADLKKKCEALKDKIQSVRSQKSNGGFENDG-TKAIP----PAPKCRRVLKGHFGKIYAMQWGGDSTSLVSASQDGKLIVWNAMSTNKVQAIPLRSSWVMTCAYEQKQRNMVACGGLDNLCSIYHLG-----------QAQVMRAAKELAAHDGYLSCCRFIDETNIITSSGDSTCILWDVESGEVKTTFKDHTGDVMSVAINPH-HPNMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTALGTGSDDSSCRLFDLRAYGEVNNFSNDKIL 268
BLAST of NO04G04020 vs. NCBI_GenBank
Match: XP_008607886.1 (guanine nucleotide-binding protein subunit beta [Saprolegnia diclina VS20] >XP_012198423.1 guanine nucleotide-binding protein subunit beta [Saprolegnia parasitica CBS 223.65] >XP_012210573.1 guanine nucleotide-binding protein subunit beta [Saprolegnia parasitica CBS 223.65] >EQC38294.1 guanine nucleotide-binding protein subunit beta [Saprolegnia diclina VS20] >KDO18713.1 guanine nucleotide-binding protein subunit beta [Saprolegnia parasitica CBS 223.65] >KDO30721.1 guanine nucleotide-binding protein subunit beta [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 253.4 bits (646), Expect = 1.000e-63 Identity = 166/282 (58.87%), Postives = 205/282 (72.70%), Query Frame = 0 Query: 12 IEQAKTKAQTLKTEIEEIRKQKDNATLPGAARSQSLPKFEDKMPRVRRVLKGHFGKVYSMHWAHDGTQLISASQDGKLIIWNAHTTNKNQSISLRSSWVMTCCFEQTTGSLVACGGLDNVCSVYRVGGPGSSASSSAAAQSAVRPAHELMAHDGYLSCCRFLDEGSLLTSSGDSTCIFWDVEKNEAITSFADHGGDVMSLSVLPSVSRQVFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNAVGTGSDDSTCRLFDLRSYGEVNVFGNDKIV 294 + + K K + LK +I+ +R QK N ++++P P+ RRVLKGHFGK+Y+M W D + L+SASQDGKLI+WNA TTNK Q+I LRSSWVMTC +EQ ++VACGGLDN+CS+Y +G +R A EL AHDGYLSCCRF+DE +++TSSGDSTCI WDVE E T+F DH GDVMS+++ ++ + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX G A+GTGSDDS+CRLFDLR+YGEVN F NDKI+ Sbjct: 4 VAELKKKCEGLKDKIQAVRSQKSNGGFENDG-TKAIP----AAPKCRRVLKGHFGKIYAMQWGGDSSSLVSASQDGKLIVWNAMTTNKVQAIPLRSSWVMTCAYEQKQRNMVACGGLDNLCSIYHLG-----------QAQVMRAAKELAAHDGYLSCCRFIDETNIITSSGDSTCILWDVESGEVKTTFKDHTGDVMSVAI-SALHPNMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDFFPNGTALGTGSDDSSCRLFDLRAYGEVNNFSNDKIL 268
BLAST of NO04G04020 vs. NCBI_GenBank
Match: EJK61374.1 (hypothetical protein THAOC_18152 [Thalassiosira oceanica]) HSP 1 Score: 252.3 bits (643), Expect = 2.300e-63 Identity = 165/237 (69.62%), Postives = 191/237 (80.59%), Query Frame = 0 Query: 56 RVRRVLKGHFGKVYSMHWAHDGTQLISASQDGKLIIWNAHTTNKNQSISLRSSWVMTCCFEQTTGSLVACGGLDNVCSVYRVGGPGSSASSSAAAQSAVRPAHELMAHDGYLSCCRFLDEGSLLTSSGDSTCIFWDVEKNEAITSFADHGGDVMSLSVLPSVSRQVFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNAVGTGSDDSTCRLFDLRSYGEVNVFGNDKI 293 ++RR LKGHFGKVY+MHWA D L+SASQDGKLIIWNA+TTNK Q+I LRSSWVMTC FEQT G L+ACGGLDNVCS+Y + ++A R EL+AHDGYLSCCRF+DEG +LTSSGDS+CI+WDV + + +F DH DVMS++V P+ + VFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX NA TGSDDS+CRLFD+RSYGEVN F +DKI Sbjct: 68 KMRRTLKGHFGKVYAMHWASDSQTLVSASQDGKLIIWNAYTTNKVQAIPLRSSWVMTCAFEQTKGDLIACGGLDNVCSIYNINQQTANA----------RATTELVAHDGYLSCCRFIDEGHILTSSGDSSCIYWDVSSGDVLKTFTDHTSDVMSVAVSPN-NPSVFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNAFSTGSDDSSCRLFDMRSYGEVNKFKSDKI 293
BLAST of NO04G04020 vs. NCBI_GenBank
Match: ETL25877.1 (hypothetical protein L916_20344 [Phytophthora parasitica] >ETP01902.1 hypothetical protein F441_20939 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 248.8 bits (634), Expect = 2.600e-62 Identity = 169/280 (60.36%), Postives = 206/280 (73.57%), Query Frame = 0 Query: 14 QAKTKAQTLKTEIEEIRKQKDNATLPGAARSQSLPKFEDKMPRVRRVLKGHFGKVYSMHWAHDGTQLISASQDGKLIIWNAHTTNKNQSISLRSSWVMTCCFEQTTGSLVACGGLDNVCSVYRVGGPGSSASSSAAAQSAVRPAHELMAHDGYLSCCRFLDEGSLLTSSGDSTCIFWDVEKNEAITSFADHGGDVMSLSVLPSVSRQVFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNAVGTGSDDSTCRLFDLRSYGEVNVFGNDKIV 294 + K K ++LK IE+ R+ K + A S K P+ RR+LKGHFGK+Y+M W D + L+SASQDGKLI+WNA TTNK Q+I LRSSWVMTC FEQ ++VACGGLDN+CS++ + + + +R EL AHDGYLSCCRF+DE S++TSSGDS CI WDVE E T+F +H GDVMS+S+ P + + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX NA+GTGSDDS+CRLFDLR+YGE+N F NDKI+ Sbjct: 6 ELKKKCESLKETIEKTREAKSDGGFQSANASAG-AKAIPAPPKCRRLLKGHFGKIYAMQWGGDSSSLVSASQDGKLIVWNAQTTNKIQAIPLRSSWVMTCAFEQKQRNMVACGGLDNLCSIFHL-----------SQEQVMRATKELAAHDGYLSCCRFIDEASIVTSSGDSNCILWDVESGEVKTTFREHSGDVMSVSINPH-NPSMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNALGTGSDDSSCRLFDLRAYGELNNFSNDKIL 272
BLAST of NO04G04020 vs. NCBI_GenBank
Match: GBG26632.1 (Guanine nucleotide-binding protein subunit beta-1 [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 248.8 bits (634), Expect = 2.600e-62 Identity = 130/283 (45.94%), Postives = 172/283 (60.78%), Query Frame = 0 Query: 13 EQAKTKAQTLKTEIEEIRKQKDNATLPGAARSQSLPKFEDKMPRVRRVLKGHFGKVYSMHWA--HDGTQLISASQDGKLIIWNAHTTNKNQSISLRSSWVMTCCFEQTTGSLVACGGLDNVCSVYRVGGPGSSASSSAAAQSAVRPAHELMAHDGYLSCCRFLDEGSLLTSSGDSTCIFWDVEKNEAITSFADHGGDVMSLSVLPSVSRQVFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNAVGTGSDDSTCRLFDLRSYGEVNVFGNDKIV 294 + K K Q L+ E++ ++++ N T+ +Q++ + + RR LKGHFGKVY+MHWA +L+SASQDGKLI+WNA TT K Q+I LRSSWVMTC FEQ T +VACGGLDN+CS+Y+V G ++ S R EL AHDGYLSCCRF+ ++LTSSGDSTCI+WD+E+ E ++SF DH GDVMS++V P+ R +F G GTGSDDS+CR+FDLR Y EVN F +D+I+ Sbjct: 4 KDGKAKLQALREELQSLKEKGHNGTM----ETQTISPLPNSTFKARRQLKGHFGKVYAMHWAGKSSAEELVSASQDGKLIVWNAQTTFKKQAIPLRSSWVMTCAFEQDTNQMVACGGLDNLCSIYKVDGETTTTS---------RATKELQAHDGYLSCCRFIGSQNILTSSGDSTCIYWDIERGEPLSSFTDHNGDVMSVAVHPT-DRNLFVSGSCDATSKLFDIRQQGCVATFVGHESDINAVNFFPNGMCFGTGSDDSSCRMFDLRCYQEVNTFMSDRIL 272 The following BLAST results are available for this feature:
BLAST of NO04G04020 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20 Position : 0 Zoom : x 1
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO04G04020 ID=NO04G04020|Name=NO04G04020|organism=Nannochloropsis oceanica|type=gene|length=1210bpback to top protein sequence of NO04G04020.1 >NO04G04020.1-protein ID=NO04G04020.1-protein|Name=NO04G04020.1|organism=Nannochloropsis oceanica|type=polypeptide|length=366bpback to top Synonyms
Publications
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