NO04G03950, NO04G03950 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO04G03950 vs. NCBI_GenBank
Match: XP_005855772.1 (hsp70-interacting protein, partial [Nannochloropsis gaditana CCMP526] >EKU20592.1 hsp70-interacting protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 286.6 bits (732), Expect = 1.200e-73 Identity = 179/350 (51.14%), Postives = 223/350 (63.71%), Query Frame = 0 Query: 1 MEGTFMDMATRLQGLLDALDKLPDENEAGKESDITRTTTPSPAAAVEQEGLTSTERAEALWEEVQEHVENLDYALMFCQAGGLPTLFRFLLQAAAAAEDKEAEARAVPALAVLATLTQNNLPVQELVLQFPFGEVEDKDKKISISSNTGSSVRGVMPLLASFLIK--GADDSSSSSELNTRRSSRFQAKALQAISCIIRGHRVAEADFVQHFALRVFIAALQPSQDARVHGKALFFLQALLGADDATRERGEELASLLPLVVPCLLVEEDEGLRHTAACVVSEMTNLLGGPTVVFGREGGEALREAMLKRRDVIEKLEGVEREEA-EDELRFWEVLAGGGEGRVFSRDGE 348 MEGTF+DM+ RL+ L L++L G+ S+ + AA +QE ++ ER +ALWEE++E VENLDYALMFCQ GGL LF++LL+AAA +D EA AV L VLATLTQNN PVQ VL F + R V+ LL+ ++ G +++SS SE + R R QAK L A+SC +RGH AEA FVQ +A VF A LQPS+ RV KALFFLQALLGADDAT RGE L LLPLVVPCL E+ LRHTAACVV+ + NL GGP V+FG++GGEALR AM +R+ ++ G +EA +EL FW LA GG GR+ RDGE Sbjct: 32 MEGTFVDMSKRLRERLGLLEELLQ----GERSEPRPRPEANVQAASDQEP-SAVERGQALWEEMEEDVENLDYALMFCQVGGLQVLFQYLLRAAAGEQDAEARTWAVRVLTVLATLTQNNPPVQAEVLAFAMQDAR-------------GGGRDVLALLSRLFLREVGLEEASSVSEGSGERHGRLQAKLLHALSCTVRGHADAEARFVQSYAPEVFRAGLQPSRQERVQVKALFFLQALLGADDATPARGEALLPLLPLVVPCLENNENVDLRHTAACVVTGLANLTGGPAVIFGKDGGEALRRAMERRQGLL----GSGSDEAMGEELLFWSALARGGTGRMSWRDGE 359
BLAST of NO04G03950 vs. NCBI_GenBank
Match: EWM28779.1 (hypothetical protein Naga_100002g128 [Nannochloropsis gaditana]) HSP 1 Score: 188.0 bits (476), Expect = 5.900e-44 Identity = 109/196 (55.61%), Postives = 133/196 (67.86%), Query Frame = 0 Query: 155 VMPLLASFLIK--GADDSSSSSELNTRRSSRFQAKALQAISCIIRGHRVAEADFVQHFALRVFIAALQPSQDARVHGKALFFLQALLGADDATRERGEELASLLPLVVPCLLVEEDEGLRHTAACVVSEMTNLLGGPTVVFGREGGEALREAMLKRRDVIEKLEGVEREEA-EDELRFWEVLAGGGEGRVFSRDGE 348 V+ LL+ ++ G + +SS SE + R R QAK L A+SC +RGH AEA FVQ +A VF A LQPS+ RV KALFFLQALLGADDAT RGE L LLPLVVPCL E+ LRHTAACVV+ + NL GGP V+FG++GGEALR AM +R+ ++ G +EA +EL FW LA GG GR+ RDGE Sbjct: 38 VLALLSRLFLREVGLEQASSVSEGSGERHGRLQAKLLHALSCTVRGHADAEARFVQSYAPEVFRAGLQPSRQERVQVKALFFLQALLGADDATPARGEALLPLLPLVVPCLENNENVDLRHTAACVVTGLANLTGGPAVIFGKDGGEALRRAMERRQGLL----GSGSDEAMGEELLFWSALARGGTGRMSWRDGE 229
BLAST of NO04G03950 vs. NCBI_GenBank
Match: XP_002181179.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC47102.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 75.5 bits (184), Expect = 4.200e-10 Identity = 91/340 (26.76%), Postives = 149/340 (43.82%), Query Frame = 0 Query: 8 MATRLQGLLDALDK--LPDENEAGKE--SDITRTTTP-SPAAAVEQEGLTSTERAEALWEEVQEHVENLDYALMFCQAGGLPTLFRFLLQAAAAAEDKEAEARAVPALAVLATLTQNNLPVQELVLQFPFGEVEDKDKKISISSNTGSSVRGVMPLLASFLIKGADDSSSSSELNTRRSSRFQAKALQAISCIIRGHRVAEADFVQ------HFALRVFIAALQPSQDARVHGKALFFLQALLGADDATRERGEELASLLPLVVPCLLVEEDEG---LRHTAACVVSEMTNLLGGPTVVFGREGGEALREAMLKRRDVIEKLEGVEREEAEDELRFWEVL 334 M+T + L+A+ K + DENE K D+T A ++EG + AE L +E+++ VE +DYA FC GLP FLL A + RA+ L ++ATL NN PVQ+ +L+ G + L+ ++ +S NT + +AK +QAI +R H +AE F + + + + + V + LFF +AL+ +D +TR R ++ L+ V LL ++ EG LR A +V ++ + + + +L ++R + L+G E+ A EL WE L Sbjct: 37 MSTEDRAFLEAVMKEGIIDENERMKSILKDVTGMMEKWRQEPATDEEG----DHAEDLLQELRDIVEQIDYARAFCSMKGLP----FLLGCVAERDHMPVATRAM-CLGIIATLCANNPPVQKELLEL-----------------------GAIGALSRLFFLESESAS-----NTDHHGQMRAKIIQAIGSNVRSHELAETVFCELPQAPTLIEIGLGLTHSESPPPFAVRQRTLFFFRALITSDSSTRIRVQKFGPLIAQVAQLLLDDQIEGSQELREMALSMVEQILDQQKSVDCIVQHK--NSLVALGVRRIAAMRALDGEEKVFAAMELESWERL 337
BLAST of NO04G03950 vs. NCBI_GenBank
Match: EAY92384.1 (hypothetical protein OsI_14114 [Oryza sativa Indica Group]) HSP 1 Score: 66.6 bits (161), Expect = 2.000e-7 Identity = 88/288 (30.56%), Postives = 130/288 (45.14%), Query Frame = 0 Query: 41 SPAAAVEQEGLTSTERAEALWEEVQEHVENLDYALMFCQAGGLPTLFRFLLQAAAAAEDKEAEARAVPALAVLATLTQNNLPVQELVLQFPFGEVEDKDKKISISSNTGSSVRGVMPLLASFLIKGADDSSSSSELNTRRSSRFQAKALQAISCIIRGHRVAEADFVQHFALRVFIAALQPSQDARVHGKALFFLQALLGADDATRERGEELASLLPLVVPCLLVEEDEGLRHTAACVVSEMT--NLLGGPTVVFGREGGEALREAMLKRRDVIE-KLEGVEREEAED 326 +P ++ +G+T E E + +E+QEHVE++D A GGL L +L + A K AE V++T+ QNN Q+LV++ SN G+ PLL +F SS + N+R KAL AIS +IR ++ A F AL S DAR+ KAL LQ LL + A R EL LP ++ L +D G+R A + E+ N G G AL + K +DV++ ++EG+ +A+D Sbjct: 62 TPDDVLQSQGVT-PENIEDMLDELQEHVESIDMANDLHSIGGLDPLLGYLKNSHAGIRAKAAE--------VVSTIVQNNPKSQQLVME----------------SN------GLEPLLTNF--------SSDASTNSR------TKALGAISSLIRHNQPGVAAFRLGNGYSALRDAL-GSDDARLQRKALHLLQYLLHDNKADRSVATELG--LPKLMMHLASSDDSGVREAALGGLLELARDNTSG---------AGNALPD-QDKLKDVLKSRIEGISTMDADD 291
BLAST of NO04G03950 vs. NCBI_GenBank
Match: XP_002295718.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >ACI64435.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 64.3 bits (155), Expect = 9.800e-7 Identity = 80/309 (25.89%), Postives = 128/309 (41.42%), Query Frame = 0 Query: 60 LWEEVQEHVENLDYALMFCQAGGLPTLFRFLLQAAAAAEDKEAEARAVPALAVLATLTQNNLPVQELVLQFPFGEVEDKDKKISISSNTGSSVRGVMPLLASFLIKGADDSSSSSELNTRRSSRFQAKALQAISCIIRGHRVAEADFVQHFALRVFI------------AALQPSQDARVHGKALFFLQALLGADDATRERGEELASLLPLVVPCL-----LVEEDEGLRHTAACVVSEMTNLLGGPTVVFGREGGEA----------------LREAMLKRRDVIEKLEG--VEREEAEDELRFWEVL 334 L++E+++ VE +DYA F GG+P FLL A E ++ AL+V+AT+ QNN PVQ +L+ G +P D + + E + K +QA+S IRGH +AE F ++ R+ + QP A++ + +F L+ALL ADD T ER E+ +++ + C E+D +R + +++++ PT +GG A + +KR I L+ ERE + EL WE L Sbjct: 97 LFQELRDIVEQIDYARAFMAMGGIP----FLL-GCATTEGNVPKSIRKAALSVMATMCQNNPPVQLNLLEV-----------------------GHIPHFIQLFF----DYTPTEENGYVGDDSIREKVVQALSASIRGHSMAEHVFCKNEQGRLMLQIGIGMTQEEGKTEQQPKPSAQLRKRCMFLLRALLTADDTTNERWEQYKNVIAYI--CTHETNPAWEDDAEIREISIAMLTQLLKQKPSPT----EDGGTADEISVASTTIAQHKNDIAAIGIKRIKEIRALDKDCEEREYSSLELEEWEQL 367 The following BLAST results are available for this feature:
BLAST of NO04G03950 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 5
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO04G03950 ID=NO04G03950|Name=NO04G03950|organism=Nannochloropsis oceanica|type=gene|length=2546bpback to top protein sequence of NO04G03950.2 >NO04G03950.2-protein ID=NO04G03950.2-protein|Name=NO04G03950.2|organism=Nannochloropsis oceanica|type=polypeptide|length=457bpback to top protein sequence of NO04G03950.1 >NO04G03950.1-protein ID=NO04G03950.1-protein|Name=NO04G03950.1|organism=Nannochloropsis oceanica|type=polypeptide|length=402bpback to top Synonyms
Publications
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