NO04G03940, NO04G03940 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO04G03940 vs. NCBI_GenBank
Match: EWM28696.1 (SOUL heme-binding protein [Nannochloropsis gaditana]) HSP 1 Score: 607.4 bits (1565), Expect = 3.800e-170 Identity = 288/378 (76.19%), Postives = 316/378 (83.60%), Query Frame = 0 Query: 102 DSLASQFEAFYNRALDGKPAQLKSLFAPGATWTGVPLAEGGGSLQDSLDMIDQGRAFMIEPRMDVTGARRDGEGRVAVDWQLSGTWPFPYRPRVRAAGTSILTLDKSTGKIKQVEEKWDKPWWRVALEQASPRAWDLWHLYLTPPAEKSLYRVVKKLAAVEIREYYPRLVLELEQHDARPDIRFTELAWVLPDFAFTDELKLQGKAQYRETYVTTSPVESCVESVDWSPPSPQLRGLQTASSVPAKRIRHHVPVPSHLGLDPVSNRLPSPPVKGVETEQGQAGRYVLQPTRYMAVRRFKGWTQTDQYSTARRWLLKWCAKEGLKTTRNEMGKSRVWVQQHNMKAGFNMAGAFCLGIYEQPSYSDWGEIAVEVVEEEGW 480 D ASQFE +YNRAL GKPAQLKSLFA GATW+GVPL+EG G LQ D +DQGRAFMIEP VTG G + ++WQLSGTWPFPYRPRVRAAGTS +TLDK TGK+KQVEE+W KPWWRV LEQASP+ WDLWHLYLTPPAEK LYRVVKKL+AVEIREYYPRLV+ELEQHDARPD+++TE AW+LPDFAFTDELKLQG+AQYRETYV TSPVESCVE VDWSPP P G Q ASSV A+RIRHHVPVPSHLGLDP+S RLPSP K V+TE GQAGRYV QP R+MAVR FKG TQT +Y +RR LL+WC KEGL+T +NE GKSRVWVQQH MKAGFNM G FCLGIYEQ SYSDWGEIAVEV + W Sbjct: 141 DLFASQFEQYYNRALQGKPAQLKSLFATGATWSGVPLSEGNGDLQGVFDALDQGRAFMIEPFFAVTGWEATDRG-MKLEWQLSGTWPFPYRPRVRAAGTSFITLDKGTGKMKQVEEQWHKPWWRVVLEQASPKGWDLWHLYLTPPAEKPLYRVVKKLSAVEIREYYPRLVIELEQHDARPDVQYTEWAWILPDFAFTDELKLQGRAQYRETYVATSPVESCVERVDWSPPLPPTGGQQPASSVAARRIRHHVPVPSHLGLDPLSPRLPSPSAKDVDTEAGQAGRYVRQPRRFMAVRAFKGLTQTQEYGASRRLLLEWCGKEGLRTVKNEKGKSRVWVQQHGMKAGFNMQGNFCLGIYEQASYSDWGEIAVEVERDPSW 517
BLAST of NO04G03940 vs. NCBI_GenBank
Match: CBJ26096.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 163.7 bits (413), Expect = 1.400e-36 Identity = 123/376 (32.71%), Postives = 178/376 (47.34%), Query Frame = 0 Query: 118 GKPAQLKSLFAPGATWTGVPLAEGGGSLQDSLDMIDQGRAFMIEPRMDVTGARRDGEGRVAVDWQLSGTWPFPYRPRVRAAGTSILTLDKSTGKIKQVEEKWDKPWWRVALEQASPRAWDLWHLYLTPPAEKSLYRVVKKLAAVEIREYYPRLVLELEQHDARPDIRFTELAWVLPDFAFTDELKLQGKAQYRETYVTTSPVESCVE---SVDWSPPSPQLRGL--QTASSVPAKRIRHHVPVPSHLGLDPVSNRLPSPPVKGVETEQGQAGRYVLQPTRYMAVRRFKGWTQTDQYSTARRWLLKWCAKEGLKTTRNEMGKSRVWVQQHNMKAGFNMAGAFCLGI-YEQPSYSDWG-EIAVEVVEEEGWARGKREG 487 G P L+ + APG W G PL G + ++ G + + PR+ V A +DG R ++W SGTWP P+ PR G S L GK+ ++ + W+ + L+ P WD+WH +PPAEK YRVVK+ IREY PR+ + D + R A +LP F E+K G+ + Y T P+E ++ + P G + + S A RI VPVP+ +GLDP +LP PP + E + Q R+V Q R +AV F G Q + + R LLK A +G++ + G+ R + +N A F AG + I Y +P Y G E+ VE+ EE EG Sbjct: 3 GDPGVLRQVLAPGVEWRG-PLGNNAGLAKVEEELRGLG-SLLNAPRLSVF-ASKDGAKR--LEWVASGTWPLPWLPRFIVKGASTLQTGPD-GKVVKITDTWEGNPVTLGLKHLVPGFWDIWHQLGSPPAEKPPYRVVKRALGYVIREYAPRMATQPSLID-YSNSREIRKALILPGFCHDGEIKTSGRKP--DEYYVTGPLEVAIQPFIATGNFPNGTWFNGTTREASQSRRANRITWTVPVPTAMGLDP--TKLPEPPSER-ERGEDQRSRHVRQGARRIAVTNFNGIPQDPEAAEVRAKLLKRLAADGVEPAKGADGRVRSGILMYNSVACFTKAGKLAMSILYHRPKYIGIGNEVFVELDPEEAVTEEVVEG 366
BLAST of NO04G03940 vs. NCBI_GenBank
Match: CEM14972.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 96.7 bits (239), Expect = 2.200e-16 Identity = 104/397 (26.20%), Postives = 170/397 (42.82%), Query Frame = 0 Query: 104 LASQFEAFYNRALDGKPAQLKSLFAPGATWT-----GVPLAEGG---GSLQDSLDMIDQGRAFMIEPR-MDVTGARRDGEGRVAVDWQLSGTWPFPY------RPRVRAAGTSILTLDKSTGKIKQVEEKWDKPWWRVALEQASPRAWDLWHLYLT---PPAEKSLYRVVKKLAAVEIREYYPRLVLELE-----------QHDARPDIRFTELAWV--LPDFAFTD----ELKLQGKAQYRETYVTTSPVESCVESV------DWSPPSPQL---RGLQTASSVPAKRIRHHVPVPSHLGLDPVSNRLPSPPVKGVETE---QGQAGRYVLQPTRYMAVRRFKGWT--QTDQYSTARRWLLKWCAKEGLKTTRNEMGKSRVWVQQHNMKAGFNMAG 452 +A +FE N L G+P + LF A+WT PL+ L++ R ++E + ++ E + + + SGT P + PRV +S +T++K+TG+I +VE+ R EQ PR ++ WH+ L P +E +RV + ++ + PR VLE + Q D+ P FT + W L F + E+ L+ R V +P S + + ++ P++ L T A+R+ VP+PS G D +++PSP V + + RY +QP R +AV G + Q+ + +R L K GLK RN GK W++ ++K GFN+ G Sbjct: 203 VAKEFENAVNFGLIGEPQYVDDLFDESASWTFPQFLPSPLSSRAAVFSKLKELGSYWGDARVALLEVKTLEPETTTASDEQAIQLSYLFSGTSPLFFLGQYLSNPRVAIDVSSNVTVNKNTGRIVRVEDTSPYTPLRTFYEQIWPRIFEAWHIPLAKGGPRSEMPPHRVHHRRFVFDVVDVPPRAVLEGQFLDPTLGREGGQCDSLPRAFFTHVLWERGLRAEPFVNVAPAEVLLEPYTVERPWRVVMTPGRSYITEIKKDQEYQYNVDEPEIVANISLSTPLQQDARRVTWVVPLPSAFGTD--IDQMPSPDVNVRPLRRYLRDEKVRYSIQPRRRLAVTAAFGISDPQSRSLDSIKRGLFYAVQKRGLKVKRNREGKPLFWLRMWDVKVGFNLEG 597
BLAST of NO04G03940 vs. NCBI_GenBank
Match: GAX22933.1 (hypothetical protein FisN_24Lh222 [Fistulifera solaris]) HSP 1 Score: 94.0 bits (232), Expect = 1.400e-15 Identity = 93/350 (26.57%), Postives = 158/350 (45.14%), Query Frame = 0 Query: 127 FAPGATW-TGVPLAEGGGSLQDSLDMIDQGRAFMIEPRMDVTGARRDGEGRVAVDWQLSGTWPFPYRPRVRAAGTSILTLDKSTGKIKQVEEKWDKPWWRVALEQASPRAWDLWHLYLTPPAEKS-LYRVVKKLAAVEIREYYPRLVLELEQHDARPDIRFTELAWVLPDFAFTDELKLQGKAQYRETYVTTSPVESCVESVDWSPPSPQLRGLQTASSVPAKRIRHHVPVPSHLGLDPVSNRLPSPPVKGVETEQGQAGRYVLQPTRYMAVRRFKGWTQTDQYSTARRWLLKWCAKEGLKTTRNEMGKSRVWVQQHNMKAGFNMAGAFCLGIYE-QPSYSDWGEIAVEV 474 + P W T P+ E ++ + AF + +T A+ + V W+++ TWP + PR+ G SIL++D S+ +QV+ +K +Q PR WD++H+ +TP AE S + L + + E RL L+ Q D R A ++P+ AFT +K G + R YV TSPVE + S Q GLQ I+ H+P+ + LP + E A Y + +R +A + G Q ++ + R+ L K+GLK R E G+ + +++KA + +G +G+Y+ +P++ E+ +E+ Sbjct: 130 YKPSMEWKTSFPVKEANPLME-----LKNALAFYEHMDVAITSAKSISSNTIEVRWEIAVTWPIFWEPRLLFTGQSILSIDGSS-ITRQVDTLDEKDLLVSVAKQIFPRFWDIYHIGMTPSAELSPRFPQSSLLKSYNVYELPARLYLQPTQLDTGK--RSDNTAAMIPNHAFTCIIKTMGPQKQR--YVPTSPVEVKLIS--------QGDGLQ---------IQWHIPLAVEFA-SQATLALPDAD-EEAEASLNPACGYKWKESRKVATVPYGGSPQDEEIANIRKQLYNQVIKDGLK-PRMENGRPVFFFWMNSVKACYTSSG-LGMGVYDWRPTFVKANEVGIEL 448
BLAST of NO04G03940 vs. NCBI_GenBank
Match: XP_002183489.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC45189.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 92.0 bits (227), Expect = 5.300e-15 Identity = 89/344 (25.87%), Postives = 147/344 (42.73%), Query Frame = 0 Query: 133 WTGVPLAEGGGSLQDSLDMIDQGRAFMIEPRMDVTGARRDGEGRVAVDWQLSGTWPFPYRPRVRAAGTSILTLDKSTGKIKQVEEKWDKPWWRVALEQASPRAWDLWHLYLTPPAEKSLYRVVK--KLAAVEIREYYPRLVLELEQHDARPDIRFTELAWVLPDFAFTDELKLQGKAQYRETYVTTSPVESCVESVDWSPPSPQLRGLQTASSVPAKRIRHHVPVPSHLGLDPVSNRLPSPPVKGVETEQGQAGRYVLQPTRYMAVRRFKGWTQTDQYSTARRWLLKWCAKEGLKTTRNEMGKSRVWVQQHNMKAGFNMAGAFCLGIYE-QPSYSDWGEIAVEV 474 WT PL+ G L ++ F + V R + + W +S WP + PRV GTS +T+++ +QV+ D Q PR WD++H+ +TP E VK LA ++ + P+LVL+ D R A ++P+ F+ +K G + R YV TSP E Q+R S ++ +P+ +P S LP P + E A +YVLQP R +A + G Q ++ R+ + K+GL+ +E G+ + Q+++K F G + +YE +P + E+ +E+ Sbjct: 165 WT-TPLSRKGDGGLSPLQELEAALEFYRRLDVAVVSGTRVSDSTFVLRWTISLAWPIFWEPRVLITGTSEVTVNERKQITRQVDSLDDTDLTASIARQVFPRFWDVYHIGMTPSTEVMPKLSVKTSPLAPYKVYDIPPQLVLQPTMKDL--GTREDNNAGLIPNHGFSCVVKTMGPQKQR--YVPTSPTE------------VQIR----PGSDGNVNLKWTIPLGVEFLTNP-SLLLPQPDQETPENIDPDA-KYVLQPRRQVATVPYAGGPQDVAIASIRKRFFEQIVKDGLQPKLDESGRPLFFFWQNSVKTCFTEEG-LGMAVYEYRPDIAKANEVGIEL 484
BLAST of NO04G03940 vs. NCBI_GenBank
Match: OEU06692.1 (hypothetical protein FRACYDRAFT_278343 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 84.0 bits (206), Expect = 1.400e-12 Identity = 80/357 (22.41%), Postives = 151/357 (42.30%), Query Frame = 0 Query: 144 SLQDSLDMIDQGRAFMIEPRMDVTGARRDGEGRVAVDWQLSGTWPFPYRPRVRAAGTSILTL----------------DKSTGKIKQVEEKW------DKPWWRVALEQASPRAWDLWHLYLTPPAEKSLYRVVKKLAAVEIREYYPRLVLELEQHDARPDIRFTELAWVLPDFAFTDELKLQGKAQYRETYVTTSPVESCVESVDWSPPSPQLRGLQTASSVPAKRIRHHVPVPSHLGLDPVSNRLPSPPVKGVETEQG-QAGRYVLQPTRYMAVRRFKGWTQTDQYSTARRWLLKWCAKEGLKTTRNEMGKSRVWVQQHNMKAGFNMAGAFCLGIYE-QPSYSDWGEIAVEVVEE 477 S +D + + F + + + ++ + + W+LS WP + PRV GTS TL K+ IKQV+ + + + Q PR WD +H+ +TP AE + K + + + PR+V R A ++P+ AFT +K G +++YV T+PVE + G + + I+ +P+ + +++ LP P + E+ Y Q R +A ++ G+ Q + S R+ L + K+G K ++ GK + + Q+N+KA + + F + +Y+ +P ++ E+ +E+V + Sbjct: 130 SKMSPMDELKIAKNFYEQIDLAIVSGKKISDDVFELSWELSLIWPTFWAPRVFLVGTSTCTLADSSALRSAIEEGTTTSKAVSVIKQVDSVFGIDTGNSLSFVSMLGSQIVPRFWDWYHIGMTPTAELLPRHTLAKKGGISVYQIPPRMV--TAPTIIETGTRENRHAEMIPNHAFTCVIKTMG--PNKKSYVPTTPVEVQI-------------GRKNDAEDDRLLIKWAIPLATQ--FQALNDNLPLPGDNSEDDEESFPTCDYEWQSLRQVATIKYGGYAQDPEISDIRKRLYEQVLKDGWKPKLDQNGKPQFFFWQNNVKACY-IDDGFGMSVYDWRPKFAKSNEVGIELVAD 466
BLAST of NO04G03940 vs. NCBI_GenBank
Match: GAX20525.1 (hypothetical protein FisN_24Hh222 [Fistulifera solaris]) HSP 1 Score: 76.6 bits (187), Expect = 2.300e-10 Identity = 80/303 (26.40%), Postives = 129/303 (42.57%), Query Frame = 0 Query: 127 FAPGATW-TGVPLAEGGGSLQDSLDMIDQGRAFMIEPRMDVTGARRDGEGRVAVDWQLSGTWPFPYRPRVRAAGTSILTLDKSTGKIKQVEEKWDKPWWRVALEQASPRAWDLWHLYLTPPAEKS-LYRVVKKLAAVEIREYYPRLVLELEQHDARPDIRFTELAWVLPDFAFTDELKLQGKAQYRETYVTTSPVESCVESVDWSPPSPQLRGLQTASSVPAKRIRHHVPVPSHLGLDPVSNRLPSPPVKGVETE--QGQAGRYVLQPTRYMAVRRFKGWTQTDQYSTARRWLLKWCAKEGLK 426 + P W T P+ E ++ + AF + +T A+ + V W+++ WP + PR+ G SIL++D +T +QV+ +K +Q PR WD++H+ +TP AE S + L + + E RL L+ Q D R A ++P+ AFT +K G + R YV T+PVE + S Q GLQ +P L ++ S + P E E A Y + +R +A + G Q ++ + R+ L K+GLK Sbjct: 130 YKPSMEWETSFPVKEANPLME-----LKNALAFYEHVDVAITSAKSINSNTIEVRWEIAVAWPIFWEPRLLFTGQSILSMDGNT-ITRQVDTLDEKDLLFSVAKQIFPRFWDIYHIGMTPSAELSPRFPQFGLLRSYNLYELPARLYLQPTQLDTGK--RIDNTAAMIPNHAFTCIIKTIGPQKQR--YVPTTPVEVKLIS--------QGDGLQIQWQIP-------------LAVEFTSQATLALPDADEEAEVSLNPACGYEWKESRKVATVPYGGSPQDEEIANLRKQLYNQVIKDGLK 401 The following BLAST results are available for this feature:
BLAST of NO04G03940 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 7
Relationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO04G03940 ID=NO04G03940|Name=NO04G03940|organism=Nannochloropsis oceanica|type=gene|length=1464bpback to top protein sequence of NO04G03940.1 >NO04G03940.1-protein ID=NO04G03940.1-protein|Name=NO04G03940.1|organism=Nannochloropsis oceanica|type=polypeptide|length=488bpback to top Synonyms
Publications
|