NO04G03850, NO04G03850 (gene) Nannochloropsis oceanica

Overview
NameNO04G03850
Unique NameNO04G03850
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1341
Alignment locationchr4:1037405..1038745 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr4genomechr4:1037405..1038745 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
BLAST of NO04G03850 vs. NCBI_GenBank
Match: EWM28829.1 (hypothetical protein Naga_100002g118 [Nannochloropsis gaditana])

HSP 1 Score: 551.2 bits (1419), Expect = 2.900e-153
Identity = 270/408 (66.18%), Postives = 316/408 (77.45%), Query Frame = 0
Query:    4 AGFVDMEAVLSVTRGEADVYVSQSFESRPVYDTGKKKVLNWTARSEKRGSDHVSLPRTLFPACHEDCYFVIGVLGKSVVPKARFSLVVRREDSIVALQDGVALRDEVADDEYVHFSVKVTDPDADLSIHLTPLSGDPDLFVDAFPNTRPTKGNHTWASQSFGSDTLTLQAADMKTHCMPNPAVGLICDYFVSVFGWENASFSILASLHRGWTEPTQLFPGLPQAGEVSQGEYAYYSFYVPPDTLSLRFVLTPQNLAGGGKGGGEDVDGWDSWSDAWEDLPDQDLFLTTSREKEPGEANFDLRSMTWAGVEEITYAKEEMVKGGGEEQAFCTDCTVYLAVYGYAGVGA-YTLRVETGVSTLQNAVPATGHLSGDGTAYYTIYSDDPKAHVLLSLVTLSGDADLYVLAAK 411
            AG VDM+ VLSV RG+ADV+VSQ+FE RPVYD    KV NWTA+S  RGSD + +PRTLFP C +DCYFV+GV GKSVVP AR+SLV RR + IVALQDGVALRDEV + EY++FS K+TDP+AD+SIHLTP +GDPDLFV   PN RP+  NHTWAS+S G DTLTLQ +DMKTHC P+P+ GL CDYF+SV+G+ENASFS+L SLH+GW EP +LFPGLPQAGEV++GEY YYSFYVPPDT+SL+FVLTPQ+L G  K   ++ D W               FLTTSR++EPGE  FDLRS +WAGVEEITY+  E+     EE  FCT CTVYLAVYGYAG G  YTLRVETG+ TLQNAVP TGHL   G A+Y IYS D  AH+L S VTLSGDADLY+LA +
Sbjct: 1021 AGNVDMDVVLSVIRGQADVFVSQTFEGRPVYDAAHNKVRNWTAKSTSRGSDRLLVPRTLFPPCEKDCYFVLGVFGKSVVPPARYSLVARRAEGIVALQDGVALRDEVGEGEYLYFSFKLTDPEADVSIHLTPFNGDPDLFVAPAPNARPSATNHTWASRSLGPDTLTLQCSDMKTHCAPDPSRGLACDYFISVYGYENASFSLLVSLHQGWREPIELFPGLPQAGEVNEGEYVYYSFYVPPDTVSLQFVLTPQDLWGEDK---DEADDWXXXXXXXXXXXXXXXFLTTSRDREPGEDTFDLRSTSWAGVEEITYSAAEL----QEEGVFCTGCTVYLAVYGYAGQGGEYTLRVETGLVTLQNAVPVTGHLVKGGAAHYKIYSRDSNAHLLFSAVTLSGDADLYILAVE 1421          
BLAST of NO04G03850 vs. NCBI_GenBank
Match: CBJ29308.1 (expressed unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 167.5 bits (423), Expect = 9.100e-38
Identity = 118/407 (28.99%), Postives = 188/407 (46.19%), Query Frame = 0
Query:   10 EAVLSVTRGEADVYVSQSFESRPVYDTGKKKVLNWTARSEKRGSDHVSLPRTLFPACHEDCYFVIGVLGKSVVPKARFSLVVRREDSIVALQDGVALRDEVADDEYVHFSVKVTDPDADLSIHLTPLSGDPDLFV---DAFPNTRPTKGNHTWASQSFGSDTLTLQAADMKTHCMPNPAVGLICDYFVSVFGWENASFSILASLHRGWTEPTQLFPG-LPQAGEVSQGEYAYYSFYVPPDTLSLRFVLTPQNLAGGGKGGGEDVDGWDS--WSDAWEDLPDQDLFLTTSREKEPGEANFDLRSMTWAGVEEITYAKEEMVKGGGEEQAFCTDCTVYLAVYGYAGVGAYTLRVETGVSTLQNAVPATGHLSG-DGTAYYTIYSDDPKAH---VLLSLVTLSGDADLYV 407
            E ++++  G+ + Y S S         G++      + S+  G   + LP    P  HE    V+ V        A + ++   ++ ++ L+DG+ ++      E  +FS+ V D   DL I L P SGDPD++V   D    + P+K N TW + SFG DTL +QA  +  +C P      IC Y + V    N S++I ASL  GW  P QL  G  PQ+  + +G + YY+  + P                       + + W+S   +    D   QDL+ T +R +EPG  ++D++S  W G   + +++            FCTDCT+Y+ VYGY   G Y++    G++ LQ   P  G + G D   YY  +  +P  H   + +    L+GD D+YV
Sbjct:   93 EVIITLAYGDVETYASSS---------GREPT---PSESDWSGGRVLRLPGWSVP--HEGDTVVVMVKATGTA-GALYRVLAASDEDVLRLEDGMPVQMLQDASEMRYFSIAVADNATDLLISLDPQSGDPDMYVSPEDPDGLSLPSKQNFTWQALSFGKDTLHMQAESLSEYCTPGTEDNEICTYCIGVEARTNCSYTIKASLSSGWRHPQQLLLGNHPQSSFLEEGNFDYYALLITP---------------------APEENPWESIVVTTTPTDGGQQDLYATANRSREPGPEDYDVKSSNWVGSSTLVFSE--------TAPGFCTDCTIYVGVYGYK-KGGYSIVASQGLTRLQEGFPQQGLVGGEDDWKYYEFF--NPPGHGKSIQVVATALTGDPDIYV 452          
BLAST of NO04G03850 vs. NCBI_GenBank
Match: OMJ88503.1 (hypothetical protein SteCoe_9537 [Stentor coeruleus])

HSP 1 Score: 77.4 bits (189), Expect = 1.200e-10
Identity = 83/349 (23.78%), Postives = 150/349 (42.98%), Query Frame = 0
Query:   69 DCYFVIGVLGKSVVPKARFSLVV--RREDSIVALQDGVALRDEVADDEYVHFSVKVTDPDADLSIHLTPLSGDPDLFVDAFP-NTRPTKGNHTWASQSFGSDTLTL---QAADMKTHCMP---NPAVGLICDYFVSVFGWENASFSILASLHRGWTEPTQLFPGLPQAGEVSQGEYAYYSFYVPPDT-LSLRFVLTPQNLAGGGKGGGEDVDGWDSWSDAWEDLPDQDLFLTTSREKEPGEANFDLRSMTWAGVEEITYAKEEMVKGGGEEQAFCTDCTVYLAVYGYAGVGAYTLRVETGVSTLQNAVPATGHLSGDGTAYYTIYSDDPKAHVLLSLVTL-SGDADLYV 407
            D  ++I V+G+S +     + VV     D+ + L + V +   V  +EY +++  +     D++I +T L+GDPD+++   P N  PT   + + S +FGS+ +TL   Q    K   MP   N      C+ ++ V G+E +++ I   +H G   P  L  G P    V+   Y +Y  Y   DT + +   L P  + G               SD + ++ D      +++ + P     D  S +    EEI  + + +     E       C +  +V+ Y+ V  Y++ V      +     AT      G  YY+ Y D    + L+++ +   G+ D+Y+
Sbjct:  679 DSTYLILVMGESYLADNTSTYVVGFTCGDANMILNEDVPITGVVMQNEYNYYTFPIHYKHEDVTISITALTGDPDMYISVDPLNPNPTYLEYDFISTTFGSEYITLVWEQGLKDKCPDMPDDYNFGDKTECNVYIGVHGFETSTYII--RVHPGKNMPMVLTLGQPINSNVNISSYNFY--YTMVDTKIDVHVYLLP--MIGD--------------SDLFVNVIDSKKESDSTKWERPTREKSDYASQSSVMSEEIDISPKIL-----ENYCSSGTCIILSSVFCYSEVCTYSISVRQTEMQMLIENQATYGSVDIGYLYYSYYCDKESTNFLITVTSFGDGNPDMYI 1002          
BLAST of NO04G03850 vs. NCBI_GenBank
Match: OMJ70119.1 (hypothetical protein SteCoe_31973 [Stentor coeruleus])

HSP 1 Score: 77.0 bits (188), Expect = 1.600e-10
Identity = 86/357 (24.09%), Postives = 154/357 (43.14%), Query Frame = 0
Query:   64 PACHEDCYFVIGVLGKSVVPKARFSLVVRRE--DSIVALQDGVALRDEVADDEYVHFSVKVTDPDADLSIHLTPLSGDPDLFVDAFP-NTRPTKGNHTWASQSFGSDTLTL-QAADMKTHCMPNP-----AVGLICDYFVSVFGWENASFSILASLHRGWTEPTQLFPGLPQAGEVSQGEYAYYSFYVPPDT-LSLRFVLTPQNLAGGGKGGGEDVDG-WDSWSDAWEDLPDQDLFLTTSREKEPGEANFDLRSMTWAGVEEITYAKEEMVKGGGEEQAFCTD--CTVYLAVYGYAGVGAYTLRVETGVSTLQNAVPATGHLSGDGTAYYTIYSDDPKAHVLLSLVTL-SGDADLYV 407
            P+   D  ++I V+G++ +     + VV     D+ + L + V +   V ++EY +++  +     D++I +T L+GDPD+++   P N  PT   + + S +FGS+ +TL     +K  C   P          C+ ++ V G+E +++ I   +H     P  L  G P +  V+   Y +Y  Y   DT +     L P  + G        +D   +S S  WE           +REK    + F + S      EEI  +  E+       Q  C    C +  +V+ Y+ V  Y++ +      +     AT      G AYY+ Y D    + L+++ +   G+ D+Y+
Sbjct:  674 PSYKLDSTYLILVMGENYLADNTSTYVVAFTCGDANMILSEDVPVTGVVIENEYNYYTFPIHYNHEDVTISITALTGDPDMYISVDPLNPNPTYREYDFVSTTFGSEYITLVWELGLKDKCPEVPDDYNFGDKTECNVYIGVHGYETSTYII--RVHPAKNLPMILSLGQPISSNVNISSYNFY--YTMVDTKIDTHVYLLP--MIGDSDLFVNVIDSKKESDSSKWE---------RPTREKNDYASQFSVMS------EEIDISSTEL-------QIVCPSGTCIILSSVFCYSEVCTYSISIRQNEVQMLIENQATYGSIDIGYAYYSYYCDKESTNFLITVTSFGDGNPDMYI 1002          
BLAST of NO04G03850 vs. NCBI_GenBank
Match: CEM37644.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 72.8 bits (177), Expect = 3.100e-9
Identity = 72/268 (26.87%), Postives = 122/268 (45.52%), Query Frame = 0
Query:   87 FSLVVRREDSIVALQDGVALRDEVADDEYVHFSVKVTDPDADLSIHLTPLSGDPDLFVDAFPNTRPTKGNHTWASQSFGSDTLTLQAADMKTHCMPNPAV---GLICDYFVSVFGWENASFSILASLHRGWTEPTQLFPGLPQAGEVSQGEYAYYSFYVPPDTLSLRFVLTPQNLAGGGKGGGEDVDGWDSWSDAWEDLPDQDLFLTTSREKEPGEANFDLRSMTWAGVEEITYAKEEMVKGGGEEQAFC------TDCTVYLAVYGY 346
            F+L+   +  ++ L +GV L   + ++E + F +   D D  L++ LT ++GD DL+V   P  R T     ++S  FGSD + + A D       N  V      C Y+++V G+ + +F+I A+L  G  +PT+L P  PQ G+  Q   A ++      TLS        N+    K G  D+      S     L D    L + ++ +    +  L ++   G E +T + E++      E+A C       DC + + VYG+
Sbjct:  860 FNLMGSSDSDVMLLAEGVPLFGTIEEEEVLFFRLASADIDHHLTVSLTIIAGDADLYVGFEPKLR-TGDPEVFSSDQFGSDVVFIPADDPAHRKYCNKDVIDKKGECVYYIAVLGYRDTAFTIEANLADG--KPTELEPFEPQEGKTLQSGSALFT-----ATLSKEAFEDEINVKVTPKTGDPDLYVMVVSSSV---LKDGTGGLGSLKDTDQATVHKSLHAL---GDEAVTLSTEQL--KADRERAQCGKGANTPDCMLLIQVYGF 1111          
BLAST of NO04G03850 vs. NCBI_GenBank
Match: OMJ73394.1 (hypothetical protein SteCoe_27925 [Stentor coeruleus])

HSP 1 Score: 70.9 bits (172), Expect = 1.200e-8
Identity = 79/366 (21.58%), Postives = 145/366 (39.62%), Query Frame = 0
Query:   54 DHVSLPRTLFPACHEDCYFVIGVLGKSVVPKARFSLVVRREDSIVALQDGVALRDEVADDEYVHFSVKVTDPDADLSIHLTPL-SGDPDLFVDAFPNTRPTKGNHTWASQSFGSDTLTLQAADMKTHCMPNPAVGLICDYFVSVFGWENASFSILASLHRGWTEPTQLFPGLPQAGEVSQGEYAYYSFYVPPDTLSLRFVLTPQNLAGGGKGGGEDVDGWDSWSDAWED-------LPDQDLFLTTSREKEPGEANFDLRSMT---WAGVEEITYAKEEMVKGGGEEQAFCTDCTVYLAVYGYAGVGAYTLRVETG--VSTLQNAVPATGHLSGDGTAYYTIYSDDPKAHVLLSLVTLSGDADLYV 407
            + + L    F  C  DCY    VL    +  +    +   +DS + L +   ++     + + +F   + + D++L I LT + + +PDL+V    NT PTK +  W S++FG +TL++   +                Y++ +F    + F+I+ S         QL+PGLPQ  E+ +     + F                                  WS + ED       L  Q + +   +  E  E    + + T   WA + +    +E ++     ++ FC +C + ++V  Y     Y + V     +  L N VP  G +  +    Y +++ D  + +   L +  GDAD+YV
Sbjct:   91 ESIHLTTKSFEKCKGDCYIKASVL---CLSSSCSFYIYYDQDSYIILSENRPIQSHTEKETFTYFRFYLAE-DSNLFILLTVIGNSNPDLYVS--KNTLPTKQSADWKSETFGGETLSIYQTESGV-------------YYIGIFCQTKSEFTIMISTE--IYSFLQLYPGLPQYMEIPEKNRNLFVF----------------------------------WSSSKEDIEIKISLLKGQVVLMANPQHPEIEEMAEKIPTPTDRAWASLTKDN--EENIIVIKASDKNFCNNCNIIISVAAYYD-SEYIITVNNAQYLEVLLNGVPVQGVVEKNTINSY-MFTLDTASDIEFRLASYVGDADIYV 397          
BLAST of NO04G03850 vs. NCBI_GenBank
Match: XP_002675208.1 (predicted protein [Naegleria gruberi] >EFC42464.1 predicted protein [Naegleria gruberi])

HSP 1 Score: 69.7 bits (169), Expect = 2.600e-8
Identity = 83/337 (24.63%), Postives = 131/337 (38.87%), Query Frame = 0
Query:   72 FVIGVLGKSVVPKARFSLVVRREDSIVALQDGVALRDEVADDEYVHFSVKVTDPDA-DLSIHLTPLSGDPDLFVDAFPNTRPTKGNHTWASQSFGSDTLTLQAADMKTHCMPNPAVGLICDYFVSVFGWENASFSILASLHRGWTEPTQLFPGLPQAGEVSQGEYAYYSFYVPPDTLSLRFVLTPQNLAGGGKGGGEDVDGWDSWSDAWEDLPDQDLFLTTSREKEPGEANFDLRSMTWAGVEEITYAKEEMVKGGGEEQAFCTDCTVYLAVYGYAGVGAYTLRV--ETGVSTLQNAVPATGHLSGDGTAYYTIYSDDPKAHVLLSLVTLSGDADLY 406
            F IGV G SV   A F   V   +  V L DG   + +     Y +F +++    A +LSI +TP+ GDPD+FV +     PT  N+ W+S+S+G D + +Q          NP  GL+  Y++ V+ + +  F+I+A      +E     P     G++ + +   Y  Y       L   L P    G                       D DL++         + ++  RSM   G +     K     G             Y+ V+GYA    Y + V  E   +   + V   G L  +   YY     D ++ V +++   SG   LY
Sbjct:  126 FYIGVHGFSV---AEFVFNVWSSNKFVHLTDGTPQQAKALRGTYTYFRLELPHLLATNLSISVTPIDGDPDIFVSS-QTQYPTSNNYEWSSRSYGFDIVNIQ-----HDTQMNP--GLV--YWIGVYAYNDVHFTIVAR----QSETAVRLPEGHAVGDLIEADQMEYYVYNNLQFQRLLISLIPLTSRG-----------------------DPDLYIKFGSVPTLTDYDYSQRSM---GNDAFEIEKASSQLG-----------YYYIGVHGYARDTKYRILVTTEEANTVCADGVSYAGRLLTNELNYYKFSHADTESRVTVTVKVYSGAVTLY 408          
BLAST of NO04G03850 vs. NCBI_GenBank
Match: XP_002738371.1 (PREDICTED: uncharacterized protein LOC100372233 [Saccoglossus kowalevskii])

HSP 1 Score: 69.7 bits (169), Expect = 2.600e-8
Identity = 43/150 (28.67%), Postives = 73/150 (48.67%), Query Frame = 0
Query:  109 EVADDEYVHFSVKVTDPDADLSIHLTPLSGDPDLFVDAFPNTRPTKGNHTWASQSFGSDTLTLQAADMKTHCMPNPAVGLICDYFVSVF---------GWENASFSILASLHRGWTEPTQLFPGLPQAGEVSQGEYAYYSFYVPPDTLSL 250
            EV  D + +F+V+VT+P  DL + +    G+PDL+V  FP   PT+ +  W+S  +G + LT+ + D      P   +G    +++ V          G EN+ F +L          T    G+   G ++  EY+YY F +P D +++
Sbjct:   37 EVQCDSFKYFTVEVTEPCMDLRVQVIRSQGEPDLYVSRFPVLYPTEKSLAWSSYDWGHENLTISSWD------PEFEIG---TFYIGVHAFCSDQVHSGDENSIFILLVESIPSTHPETPDMMGMTIQGTLTPQEYSYYRFCIPRDCVTV 177          
BLAST of NO04G03850 vs. NCBI_GenBank
Match: XP_002673162.1 (predicted protein [Naegleria gruberi] >EFC40418.1 predicted protein [Naegleria gruberi])

HSP 1 Score: 69.3 bits (168), Expect = 3.400e-8
Identity = 50/175 (28.57%), Postives = 84/175 (48.00%), Query Frame = 0
Query:   85 ARFSLVVRREDSIVALQDGVALRDEVADDEYVHFSVKVTDPDADLSIHLTPLSGDPDLFVDAFPNTRPTKGNHTWASQSFGSDTLTLQAADMKTHCMPNPAVGLICDYFVSVFGWENASFSILASLHRGWTEPTQLFPGLPQAG----EVSQGEYAYYSFYVPPDTLSLRFVLTP 256
            + +++VV   +  + L D V     V   +Y  F + ++D   D+S  L+ +SGD D+++    N    + N+ W + S+  + L   AA+      P     L    +V+V+G+  +SFSI+A LH G  +P +L  G+P  G    ++S   Y YY       T  LR V+ P
Sbjct:  464 SNYTIVVSSANRFIELVDTVQYSYTVNKRDYRKFVLPISDNSVDVSFSLSTISGDADMYIST--NQLVDRANYKWKAASYARNELIHIAANDPLRHSPEFDGSL----YVAVYGYAASSFSIVAYLHTG--QPIELESGVPVYGVLENDMSSQNYKYYL----STTRDLRIVVQP 626          
BLAST of NO04G03850 vs. NCBI_GenBank
Match: PIK36137.1 (hypothetical protein BSL78_27033 [Apostichopus japonicus])

HSP 1 Score: 66.6 bits (161), Expect = 2.200e-7
Identity = 55/218 (25.23%), Postives = 96/218 (44.04%), Query Frame = 0
Query:   48 SEKRGSDHVSLPRTLFPACHEDCYFVIGVLGKSVVPKARFSLVVRREDSIVALQD---------GVALRDEVAD-DEYVHFSVKVTDPDADLSIHLTPLSGDPDLFVDAFPNTRPTKGNHTWASQSFGSDTLTLQAADMK-THCMPNPAVGLICDYFVSVFGWENASFSILASLHRGWTEPTQLFPGLPQAGEVSQGEYAYYSFYVPPDTLSLRFVLT 255
            + K+ S H++L          + Y V  +  K + P   F LV     S V L +         G  L +++A  +EY ++ + V++P  DL I +  + G+P+L++   PN  PT  +  W+S  +GS+ L + + D + T       V   C   V   G+ +A FS+  +        +++       G +S   Y YY F VP    ++  +LT
Sbjct:    3 ASKKSSLHITL----------EVYMVFKMETKRLAPILSFVLVAALVPSCVRLTEAQQHNELTFGQRLVNQIAKCNEYAYYKIDVSEPCQDLRIQVDVIEGEPNLYMCKSPNLYPTYSSLAWSSYDWGSEDLVISSWDPEFTTGTFYIGVHAYCGDDVDT-GYTDARFSVYVTTVTSVHPHSEISLNGTLPGTLSVNGYDYYRFCVPSSCSNIEVLLT 209          
The following BLAST results are available for this feature:
BLAST of NO04G03850 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 11
Match NameE-valueIdentityDescription
EWM28829.12.900e-15366.18hypothetical protein Naga_100002g118 [Nannochlorop... [more]
CBJ29308.19.100e-3828.99expressed unknown protein [Ectocarpus siliculosus][more]
OMJ88503.11.200e-1023.78hypothetical protein SteCoe_9537 [Stentor coeruleu... [more]
OMJ70119.11.600e-1024.09hypothetical protein SteCoe_31973 [Stentor coerule... [more]
CEM37644.13.100e-926.87unnamed protein product [Vitrella brassicaformis C... [more]
OMJ73394.11.200e-821.58hypothetical protein SteCoe_27925 [Stentor coerule... [more]
XP_002675208.12.600e-824.63predicted protein [Naegleria gruberi] >EFC42464.1 ... [more]
XP_002738371.12.600e-828.67PREDICTED: uncharacterized protein LOC100372233 [S... [more]
XP_002673162.13.400e-828.57predicted protein [Naegleria gruberi] >EFC40418.1 ... [more]
PIK36137.12.200e-725.23hypothetical protein BSL78_27033 [Apostichopus jap... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL080nonsL080Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR058ncniR058Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR110ngnoR110Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO04G03850.1NO04G03850.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO04G03850.1NO04G03850.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO04G03850 ID=NO04G03850|Name=NO04G03850|organism=Nannochloropsis oceanica|type=gene|length=1341bp
ATGGGAGCGGCGGGTTTTGTGGATATGGAGGCGGTGTTGAGCGTGACGAG
GGGGGAAGCGGATGTATATGTCTCGCAAAGCTTTGAGAGTCGGCCGGTGT
ATGATACAGGGAAGAAAAAAGTGTTGAATTGGACGGCCAGGAGCGAGAAG
AGGGGAAGCGATCACGTATCGTTACCTCGCACCTTGTTCCCTGCATGTCA
TGAGGATTGCTATTTTGTCATAGGCGTATTAGGGAAGAGTGTGGTGCCGA
AGGCGAGATTCTCTTTAGTGGTTCGACGAGAAGATAGCATCGTAGCCTTG
CAAGACGGGGTGGCGTTGAGGGACGAAGTAGCAGATGATGAATATGTGCA
TTTTTCGGTGAAGGTCACTGATCCTGATGCGGACCTGAGCATTCATTTAA
CACCTCTGAGTGGGGATCCTGATTTGTTTGTGGATGCATTTCCCAACACA
CGACCTACCAAGGGTAACCATACGTGGGCTAGTCAGTCGTTTGGCTCCGA
CACACTGACCTTACAGGCCGCAGATATGAAGACACACTGCATGCCGAACC
CTGCCGTAGGCTTGATATGCGATTATTTCGTATCGGTTTTTGGGTGGGAG
AATGCGTCGTTTTCGATCTTGGCTTCGCTCCATCGGGGATGGACGGAACC
CACTCAGCTTTTCCCTGGCTTGCCTCAGGCGGGGGAGGTGAGTCAGGGTG
AGTACGCATATTACTCTTTCTATGTGCCCCCGGATACACTTAGCTTGAGG
TTCGTTTTGACACCACAGAACCTGGCGGGAGGGGGCAAGGGGGGAGGCGA
GGATGTGGATGGTTGGGATAGCTGGTCCGATGCATGGGAGGACCTGCCAG
ACCAAGATTTGTTTTTGACGACTTCCCGAGAGAAAGAACCAGGCGAAGCG
AATTTTGACTTGCGGAGTATGACGTGGGCAGGGGTAGAGGAGATCACGTA
TGCTAAGGAGGAGATGGTGAAGGGAGGGGGGGAGGAACAGGCTTTCTGCA
CGGACTGCACGGTTTACTTGGCGGTGTATGGATATGCGGGTGTGGGTGCG
TATACTTTGAGGGTAGAGACGGGCGTGTCGACGCTCCAGAATGCGGTACC
TGCCACGGGGCATCTTTCGGGTGATGGGACTGCATATTATACGATTTATA
GTGATGATCCCAAAGCGCACGTGCTTTTGTCTTTGGTCACTTTATCGGGA
GATGCGGATTTGTATGTGCTTGCTGCGAAGTACGAGGACGAGGATGAAGG
CGAGGACGAGGAAGGGGGGGGGGGAAGCCGCGGTTTTGGCCGAGCAAGGA
CCATTATCATTGGAAGAGCAATCGGGTGGGGGACGATGTAG
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protein sequence of NO04G03850.1

>NO04G03850.1-protein ID=NO04G03850.1-protein|Name=NO04G03850.1|organism=Nannochloropsis oceanica|type=polypeptide|length=447bp
MGAAGFVDMEAVLSVTRGEADVYVSQSFESRPVYDTGKKKVLNWTARSEK
RGSDHVSLPRTLFPACHEDCYFVIGVLGKSVVPKARFSLVVRREDSIVAL
QDGVALRDEVADDEYVHFSVKVTDPDADLSIHLTPLSGDPDLFVDAFPNT
RPTKGNHTWASQSFGSDTLTLQAADMKTHCMPNPAVGLICDYFVSVFGWE
NASFSILASLHRGWTEPTQLFPGLPQAGEVSQGEYAYYSFYVPPDTLSLR
FVLTPQNLAGGGKGGGEDVDGWDSWSDAWEDLPDQDLFLTTSREKEPGEA
NFDLRSMTWAGVEEITYAKEEMVKGGGEEQAFCTDCTVYLAVYGYAGVGA
YTLRVETGVSTLQNAVPATGHLSGDGTAYYTIYSDDPKAHVLLSLVTLSG
DADLYVLAAKYEDEDEGEDEEGGGGSRGFGRARTIIIGRAIGWGTM*
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