NO04G03830, NO04G03830 (gene) Nannochloropsis oceanica

Overview
NameNO04G03830
Unique NameNO04G03830
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4180
Alignment locationchr4:1030682..1034861 +

Link to JBrowse

Properties
Property NameValue
Descriptiondecapping 2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr4genomechr4:1030682..1034861 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0003723RNA binding
GO:0030145manganese ion binding
GO:0030145manganese ion binding
GO:0016787hydrolase activity
GO:0003723RNA binding
Vocabulary: INTERPRO
TermDefinition
IPR015797NUDIX_hydrolase_dom-like
IPR036189DCP2_BoxA_sf
IPR000086NUDIX_hydrolase_dom
IPR007722DCP2_BoxA
IPR020476Nudix_hydrolase
Homology
BLAST of NO04G03830 vs. NCBI_GenBank
Match: CCI45566.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 218.0 bits (554), Expect = 8.500e-53
Identity = 124/331 (37.46%), Postives = 171/331 (51.66%), Query Frame = 0
Query:  188 EIEARFLLNLPEEELASVERLFFQLEQAHWYYEDFLADAYPECLPHFELEGFTRALFTRSECLQHLQEGHADLVKAFNSYKYAVPVYGCVCLNPEQDKVLLVCNWGGDSWGFPKGKINEGEAPAECAAREVEEETGYDVRPLLREEDSFTMVQNAKKLHFYIIQDVPETFRFEPQVRKEVSEIKFWPLDDLPGNS------NRGLTRCLAHVRHWQXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVGRK-GRGGEARAQSAPGGR--------XXXXXXXXXXQADVNNLTTFGAGDAGSDWNVNAMFAANEKLTGRKFTYDGNPQKFGDN 504
            E+++RFL+NLP  EL + ERLFFQLEQ +W+YEDF AD +PE  PH +   F R +F+    L+   E    + + F +Y+  VPV GC+ LN +++K+LLV NW G  W FP+GK+NE E   +CA REV EE GYDV   L E+    +V N +++  Y+ ++V E + F PQ RKE+S I+++ +D LP  S         L RCL+  +                               +V RK  R    R+ S P  R                    D +N  TFG   A   ++V  MF  NE+LTG+KF YDGNP  FG N
Sbjct:   18 ELQSRFLVNLPRSELTTTERLFFQLEQCYWFYEDFYADNFPEECPHLKFYEFARKMFSHCLLLKPHAENWERMYEEFKTYQSQVPVIGCILLNAQENKLLLVQNWKGTCWNFPRGKVNENELDIDCARREVMEECGYDVGNSLSEDSFLELVLNKQRIRMYLCRNVSEEYTFAPQTRKEISSIRWFRIDQLPKKSWCVLPFMSRLKRCLSQEKQKTLGKGKVRGILKNVRPSSVPRNRPENEFSNVARKEKRQTSKRSISTPHARAIGQRPRGHFGTECDVPTSYDHSNKETFGVSTA--SFSVEDMFNVNERLTGQKFVYDGNPHNFGTN 346          
BLAST of NO04G03830 vs. NCBI_GenBank
Match: CBN79148.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 216.1 bits (549), Expect = 3.200e-52
Identity = 149/398 (37.44%), Postives = 195/398 (48.99%), Query Frame = 0
Query:  181 TLDAAVLEIEARFLLNLPEEELASVERLFFQLEQAHWYYEDFLADAYPECLPHFELEGFTRALFTRSECLQHLQEGHADLVKAFNSYKYAVPVYGCVCLNPEQDKVLLVCNWGGDSWGFPKGKINEGEAPAECAAREVEEETGYDVRPLLREEDSFTMVQNAKKLHFYIIQDVPETFRFEPQVRKEVSEIKFWPLDDLPGNSNRGLTRCLAHVRHWQXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVGRK------------------------------------GRGGEA-------------------------RAQSAPGGRXXXXXXXXXXQA-----DVNNLTTFGAGD-------AGSDWNVNAMFAANEKLTGRKFTYDGNPQKFGDNVQ 506
            TL+ A+ +++ RF+LNLPE EL+S +RLFFQLEQA W+YEDF+ADA+   LPHF+L+ F + +F   E L+ L   + +L + F S+K  +P  GC+ LN     V+LV  W G+S G PKGKIN+GE   + A REV+EETGYD R    E+D  T+  N ++   +I+  V ETF FEPQVRKE+S ++++PLD LP  S  G+   +  +R W                             +  R+                                    GR   A                         RA SAP   XXXXXXXXXX       D  N  TFG  D        G  W+  AM AANE+LTGR F YDGNP +FGD  Q
Sbjct:  100 TLEDALDDVQVRFVLNLPEAELSSADRLFFQLEQAWWFYEDFIADAHKH-LPHFKLKEFAKLMFEHCEALRPLSGKYNELFEYFRSWKGTIPTAGCILLNAAMTDVVLVKCWKGNSRGLPKGKINQGEPAIDAAIREVQEETGYDARGGANEKDFLTLYLNGQQTTMFIVVGVDETFPFEPQVRKEISAVEWFPLDALPSRS-FGVEPFVPRLRRWMAKTKGVRAPKSATAGTNAEPDQGEKGEGNFARRVSRRGCRGVDEPVATVVSHWGGGIFEWHRLRQRSRAGRAARAPPAVAETAARIKDHAPSTVAAGDGVRACSAPNXXXXXXXXXXXXXXKAKGYDRKNQDTFGGADEDPNGNGGGDGWDFEAMLAANERLTGRTFVYDGNPHEFGDPAQ 495          
BLAST of NO04G03830 vs. NCBI_GenBank
Match: CCA20330.1 (mRNA decapping enzyme putative [Albugo laibachii Nc14])

HSP 1 Score: 213.4 bits (542), Expect = 2.100e-51
Identity = 119/330 (36.06%), Postives = 169/330 (51.21%), Query Frame = 0
Query:  188 EIEARFLLNLPEEELASVERLFFQLEQAHWYYEDFLADAYPECLPHFELEGFTRALFTRSECLQHLQEGHADLVKAFNSYKYAVPVYGCVCLNPEQDKVLLVCNWGGDSWGFPKGKINEGEAPAECAAREVEEETGYDVRPLLREEDSFTMVQNAKKLHFYIIQDVPETFRFEPQVRKEVSEIKFWPLDDLPGNS------NRGLTRCLAHVRHWQXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVGRKGRGGEARAQSAPGGRXXXXXXXXXXQADVN--------NLTTFGAGDAGSDWNVNAMFAANEKLTGRKFTYDGNPQKFGDN 504
            E+++RFL+NLP  EL + ERLFFQLEQ +W+YEDF AD +P+  PH +   F R +F+    L+   E    + + F +Y+  VPV GC+ LN +++K+LLV NW G  W FP+GK+NE E   +CA REV EE GYDV   L E+    MV N +++  Y+ ++V E + F PQ RKE+S I+++ +D LP  +         L RCL+  +                                  ++ R    R+ S P  R            + +        N  TFG   A   ++V  MF  NE+LTG+KF YDGNP  FG N
Sbjct:   18 ELQSRFLVNLPRSELTTTERLFFQLEQCYWFYEDFYADNFPKECPHLKFHEFARKMFSHCLLLKPHAENWERMYEEFKTYQSQVPVIGCILLNAQENKLLLVQNWKGTCWNFPRGKVNEKELDIDCARREVMEECGYDVGNALSEDSYLEMVLNKQRIRMYLCRNVAEEYTFAPQTRKEISAIRWFHIDHLPKKTWCVLPFMSRLKRCLSQDKQKNVNEGKIKGILKKLRPSSVPKNRPEKCLNVTRKEKRQTSKRSISTPHARVIGQRSRGHFGTECDIPTSYDHVNSETFGVSTA--SFSVEDMFNVNERLTGQKFVYDGNPHDFGTN 345          
BLAST of NO04G03830 vs. NCBI_GenBank
Match: OQR94336.1 (mRNA decapping enzyme [Achlya hypogyna])

HSP 1 Score: 207.6 bits (527), Expect = 1.100e-49
Identity = 128/361 (35.46%), Postives = 176/361 (48.75%), Query Frame = 0
Query:  176 AKHQMTLDAAVLEIEARFLLNLPEEELASVERLFFQLEQAHWYYEDFLADAYPECLPHFELEGFTRALFTRSECLQHLQEGHADLVKAFNSYKYAVPVYGCVCLNPEQDKVLLVCNWGGDSWGFPKGKINEGEAPAECAAREVEEETGYDVRP-LLREEDSFTMVQNAKKLHFYIIQDVPETFRFEPQVRKEVSEIKFWPLDDLPGNSNRGLTRCLAHVRHWQXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVGRKGRGGEA---------------------------RAQSAPGGR-------XXXXXXXXXXQADVNNLTTFGAGDAGSDWNVNAMFAANEKLTGRKFTYDGNPQKFG 502
            A  + T++  + E+++RFL+NLPE EL+S ERLFFQ+EQ +W+YEDF AD +   L H +L  F R LF     LQ L+     + + F +Y+  +PV G + LNP + K++LV NW G SW  P+GK+N+GE+  ECA REV EE GY   P  +  +D      N +++  YII  VP+ F F PQ RKE+S I+++  DDLP     G+   ++ +R W                             S  R   G E                            R+ S P  R                  +D  N  TFGA DA   +NV  MF+ NE+LTG KFTY+GNP  FG
Sbjct:   17 AAKKPTMEEVMDELQSRFLMNLPESELSSSERLFFQIEQCYWFYEDFYADHHAH-LTHLKLNDFARKLFNHCILLQPLKAQCESMFQDFKAYQSQIPVVGGILLNPAKTKLILVRNWKGTSWSLPRGKVNQGESDVECAKREVFEECGYAAPPSAINPKDYIEFTMNQQRMRMYIITCVPDDFAFAPQTRKEISLIQWFEFDDLP-KKTWGVLPFMSRLRRW---ITSKKNEKKGKKGNGRNGTPAKGRSVSAPRNRPGKETVNAEVPPPLPPTPLLHNPAHQHLQADNRSYSTPQSRPRKANRGHFGTEKQIPTASDEVNEETFGARDASFSFNVEEMFSVNEQLTGVKFTYNGNPHDFG 372          
BLAST of NO04G03830 vs. NCBI_GenBank
Match: XP_008606389.1 (hypothetical protein SDRG_02571 [Saprolegnia diclina VS20] >EQC39915.1 hypothetical protein SDRG_02571 [Saprolegnia diclina VS20])

HSP 1 Score: 205.7 bits (522), Expect = 4.300e-49
Identity = 135/359 (37.60%), Postives = 186/359 (51.81%), Query Frame = 0
Query:  181 TLDAAVLEIEARFLLNLPEEELASVERLFFQLEQAHWYYEDFLADAYPECLPHFELEGFTRALFTRSECLQHLQEGHADLVKAFNSYKYAVPVYGCVCLNPEQDKVLLVCNWGGDSWGFPKGKINEGEAPAECAAREVEEETGYDVRPL-LREEDSFTMVQNAKKLHFYIIQDVPETFRFEPQVRKEVSEIKFWPLDDLPGNSNRGLTRCLAHVRHW-------------------------------------QXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVGRKGRGGEARAQSAPGGRXXXXXXXXXXQADVNNLTTFGAGDAGSDWNVNAMFAANEKLTGRKFTYDGNPQKFG 502
            T+D  + E+++RFL+NLPE EL+S ERLFFQ+EQ +W+YEDF AD +   L H +L  F R +F     LQ L+     + + F +Y+  +PV G + LNP + K++LV NW G SW  P+GK+N+GE+  ECA REV EE GY    + +  +D      N +++  YII  VPE F F PQ RKE+S I+++  DDLP     G+   ++ +R W                                      XXXXXXXXXXX                 +  R     ++R + A  G             DVN+  TFGA DA   +NV+ MF+ NE+LTG KFTY+GNP  FG
Sbjct:   21 TMDEVMDELQSRFLMNLPESELSSSERLFFQIEQCYWFYEDFYADHHAH-LTHLKLNDFARKMFNHCILLQPLKAQCESMFQDFKAYQSQIPVVGGILLNPTKTKLILVRNWKGTSWSLPRGKVNQGESDVECAKREVFEECGYAPPAIAVTPKDYIEFTMNQQRMRMYIITSVPEDFAFAPQTRKEISLIQWFEFDDLP-KKTWGVLPFMSRLRRWIASRKNDKKAKKANGRNNTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPVQILQRPHPAHVVAAADNRSYSTPQSRPRKANRGHFGTEKQIPTASDDVND-ETFGARDASFSFNVDEMFSVNEQLTGVKFTYNGNPHDFG 376          
BLAST of NO04G03830 vs. NCBI_GenBank
Match: OWZ11721.1 (MRNA decapping enzyme [Phytophthora megakarya])

HSP 1 Score: 204.9 bits (520), Expect = 7.400e-49
Identity = 125/353 (35.41%), Postives = 173/353 (49.01%), Query Frame = 0
Query:  176 AKHQMTLDAAVLEIEARFLLNLPEEELASVERLFFQLEQAHWYYEDFLADAYPECLPHFELEGFTRALFTRSECLQHLQEGHADLVKAFNSYKYAVPVYGCVCLNPEQDKVLLVCNWGGDSWGFPKGKINEGEAPAECAAREVEEETGYDVRPLLREEDSFTMVQNAKKLHFYIIQDVPETFRFEPQVRKEVSEIKFWPLDDLPGNSNRGLTRCLAHVRHW---------------QXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVGRKGRGGEARAQSAPGGRXXXXXXXXXXQA------------DVNNLTTFGAGDAGSDWNVNAMFAANEKLTGRKFTYDGNPQKFG 502
            +K + +L   + E+++RFL+NLPE ELAS ERLFFQ+EQ +W+YEDF AD Y   L H +L  F R +F     LQ L     +L + F +Y+  VPV GC+ LN  + K++LV NW G SW FP+GK+NEGE+  +CA REV EE GYDV   L  +     V N +++  Y+  DVPE + F PQ RKE+S IK++  D LP      +   ++ ++ W                                            + G+K R  E    +    R          +             D  N  TFG    G  ++V  MF+ NE+LTG+KF YDGNP  FG
Sbjct:    5 SKKKPSLAEVMDELQSRFLVNLPESELASSERLFFQIEQCYWFYEDFYADQYAH-LQHVKLNDFARQMFAHCPLLQPLAHRCDELFQDFKTYQRQVPVVGCILLNATRTKLVLVRNWKGTSWTFPRGKVNEGESDLDCARREVFEECGYDVGDSLAPKQFLEFVANDQRMRMYMCPDVPEDYAFAPQTRKEISTIKWFAFDALP-KKTWSVMPFMSRLKRWVKGHKMSKKKSSYPATNTGRAASAPRNRPLTLLTNGAAQQNTEYNPGKKNRQVERSISTPHNDRPVATGSKKANRGHFGTEFDTATSYDGLNDETFGNTKKG--FSVEEMFSVNERLTGQKFEYDGNPHDFG 353          
BLAST of NO04G03830 vs. NCBI_GenBank
Match: XP_008861744.1 (hypothetical protein H310_00659 [Aphanomyces invadans] >ETW10333.1 hypothetical protein H310_00659 [Aphanomyces invadans])

HSP 1 Score: 204.5 bits (519), Expect = 9.700e-49
Identity = 124/379 (32.72%), Postives = 181/379 (47.76%), Query Frame = 0
Query:  171 SGGRSAKHQMTLDAAVLEIEARFLLNLPEEELASVERLFFQLEQAHWYYEDFLADAYPECLPHFELEGFTRALFTRSECLQHLQEGHADLVKAFNSYKYAVPVYGCVCLNPEQDKVLLVCNWGGDSWGFPKGKINEGEAPAECAAREVEEETGYDVRPL-------LREEDSFTMVQNAKKLHFYIIQDVPETFRFEPQVRKEVSEIKFWPLDDLPGNSNRGLTRCLAHVRHWQXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVGRKGRGGE------------------------------ARAQSAPGGR----------XXXXXXXXXXQADVNNLTTFGA-GDAGSDWNVNAMFAANEKLTGRKFTYDGNPQKFG 502
            S   S++ + T++  + E+++RFL+NLP+ ELAS ERLFFQ+EQ +W+YEDF AD +   L H +L  F R +F     LQ L++    + + F +Y+  +PV GC+ LNP + K++LV NW G SW  P+GK+N+GE   +CA REV EE GYD   +       +  +D      N +++  YI+ +VPE F F PQ RKE+S I+++  D+LP     G+   ++ +R W                                R G  G+                              +R+ S P  R                      D  N  TFGA  +A   +NV+ MF  NE+LTG  F+YDGNP  FG
Sbjct:   48 SSSTSSRGKPTMEEVMDELQSRFLMNLPQSELASSERLFFQIEQCYWFYEDFYADHHNH-LTHLKLNDFARKMFNHCVLLQPLKQQCESMFQDFKTYQSQIPVVGCILLNPAKTKLVLVRNWKGTSWSLPRGKVNQGETDLDCARREVFEECGYDTSTIVSADGVGINAKDFIEFHVNQQRIRMYIVTNVPEEFNFAPQTRKEISLIQWFEFDELP-KKTWGVLPFMSRLRRWITNEAKKATNTKKKSSRSNTPVKNRSVSAPRNRPGHTGKPVAPASPPTTPPLPKTHVVASNPHLQHMASSRSMSTPHARPKAKTLQSRGHFGTERQSSTSLDHVNAETFGALSNATFSFNVDEMFRVNEQLTGATFSYDGNPHDFG 424          
BLAST of NO04G03830 vs. NCBI_GenBank
Match: XP_002906211.1 (mRNA decapping enzyme [Phytophthora infestans T30-4] >EEY65612.1 mRNA decapping enzyme [Phytophthora infestans T30-4])

HSP 1 Score: 203.8 bits (517), Expect = 1.700e-48
Identity = 122/353 (34.56%), Postives = 176/353 (49.86%), Query Frame = 0
Query:  174 RSAKHQMTLDAAVLEIEARFLLNLPEEELASVERLFFQLEQAHWYYEDFLADAYPECLPHFELEGFTRALFTRSECLQHLQEGHADLVKAFNSYKYAVPVYGCVCLNPEQDKVLLVCNWGGDSWGFPKGKINEGEAPAECAAREVEEETGYDVRPLLREEDSFTMVQNAKKLHFYIIQDVPETFRFEPQVRKEVSEIKFWPLDDLPGNSNRGLTRCLAHVRHWQXXXXXXXXXXXXXXXXXXXXXXXXXXXXSV--------------GRKGRGGEARAQSAP-------GGRXXXXXXXXXXQADV----NNLTTFGAGDAGSDWNVNAMFAANEKLTGRKFTYDGNPQKFG 502
            +++K + +L   + E+++RFL+NLP  ELAS ERLFFQ+EQ  W+YEDF AD Y   L H +L  F R +F     L+ L     +L + F +Y+  VPV GC+ LN  + K++LV NW G SW FP+GK+NEGE+  +CA REV EE GYDV   L  +    +V N +++  Y+  DVPE + F PQ RKE+S IK++  D LP      +   ++ ++ W                              +              G+K    + R+ S P        G           + D     + L     G+A   ++V  MF+ NE+LTG+KF YDGNP  FG
Sbjct:    4 KTSKKKPSLAEVMDELQSRFLVNLPASELASSERLFFQIEQCFWFYEDFYADQYAH-LQHVKLNDFARQMFAHCPLLRPLAHRCDELFQDFKTYQRQVPVVGCILLNSARTKLVLVRNWKGTSWTFPRGKVNEGESDMDCARREVMEECGYDVGDNLAPKQYLELVANDQRMRMYMCPDVPEDYAFAPQTRKEISTIKWFAFDALP-KKTWSVMPFMSRLKRWVKGHKMAKKKTSNSSPNSTGRAASAPRNRPLTLITNGAAQHITENGKKKNRQDERSISTPHNDRPATTGSKKANRGHFGTEFDTATSYDGLNDETFGNAKKGFSVEEMFSVNERLTGQKFEYDGNPHDFG 354          
BLAST of NO04G03830 vs. NCBI_GenBank
Match: OQS02536.1 (mRNA decapping enzyme [Thraustotheca clavata])

HSP 1 Score: 203.0 bits (515), Expect = 2.800e-48
Identity = 122/356 (34.27%), Postives = 169/356 (47.47%), Query Frame = 0
Query:  181 TLDAAVLEIEARFLLNLPEEELASVERLFFQLEQAHWYYEDFLADAYPECLPHFELEGFTRALFTRSECLQHLQEGHADLVKAFNSYKYAVPVYGCVCLNPEQDKVLLVCNWGGDSWGFPKGKINEGEAPAECAAREVEEETGY-DVRPLLREEDSFTMVQNAKKLHFYIIQDVPETFRFEPQVRKEVSEIKFWPLDDLPGNSNRGLTRCLAHVRHW----------------------------QXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVGRKGRGGEARAQSAPGGRXXXXXXXXXXQ------ADVNNLTTFGAGDAGSDWNVNAMFAANEKLTGRKFTYDGNPQKFG 502
            T++  + E+++RFL+NLP  E AS ERLFFQ+EQ +W+YEDF AD +   L H +L  F R +F     LQ LQ     + + F +Y+  +PV G + LNP + K++LV NW G SW  P+GK+N+ E+  ECA REV EE GY      +  +D      N +++  YII DVPE F F PQ RKE+S I+++  DDLP     G+   ++ +R W                            +                             V        +  Q+ P GR          +       D  N  TFG  D G  +NV+ MF  NE+LTG KFTY+GNP  FG
Sbjct:   12 TMEEVMDELQSRFLMNLPASEFASSERLFFQIEQCYWFYEDFYADHHAH-LSHLKLNDFARKMFNECSLLQPLQHQCESMFQDFKAYQSQIPVVGGILLNPSKTKLILVRNWKGTSWSLPRGKVNQAESDVECAKREVFEECGYAPPSNAINTKDFIEFTTNQQRMRMYIITDVPEHFAFAPQTRKEISLIQWFEFDDLP-KKTWGVLPFMSRLRRWITSKKNEKKGKKRNSTPGKGRSVSAPRNRPQNQATDRVDMILPPSPPIAVRQNPTQQHVQHDPSRSYSTPQARPRGRNNLNRGHFGTEKQTSTSCDQVNEETFGVRDTGFSFNVDEMFKVNEELTGVKFTYNGNPHDFG 365          
BLAST of NO04G03830 vs. NCBI_GenBank
Match: ETI40052.1 (hypothetical protein F443_14444 [Phytophthora parasitica P1569] >ETM40037.1 hypothetical protein L914_13900 [Phytophthora parasitica] >KUF84996.1 mRNA decapping complex subunit 2 [Phytophthora nicotianae])

HSP 1 Score: 202.6 bits (514), Expect = 3.700e-48
Identity = 121/355 (34.08%), Postives = 172/355 (48.45%), Query Frame = 0
Query:  174 RSAKHQMTLDAAVLEIEARFLLNLPEEELASVERLFFQLEQAHWYYEDFLADAYPECLPHFELEGFTRALFTRSECLQHLQEGHADLVKAFNSYKYAVPVYGCVCLNPEQDKVLLVCNWGGDSWGFPKGKINEGEAPAECAAREVEEETGYDVRPLLREEDSFTMVQNAKKLHFYIIQDVPETFRFEPQVRKEVSEIKFWPLDDLPGNSNRGLTRCLAHVRHW---------------------------QXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVGRKGRGGEARAQSAPGGRXXXXXXXXXXQADVNNLTTFGAGDAGSDWNVNAMFAANEKLTGRKFTYDGNPQKFG 502
            +++K + +L   + E+++RFL+NLPE ELAS ERLFFQ+EQ  W+YEDF AD Y   L H +L  F R +F     L+ L     +L + F +Y+  VPV GC+ LN  + K++LV NW G SW FP+GK+NEGE+  +CA REV EE GYDV   L  +     V N +++  Y+  DVPE + F PQ RKE+S IK++  D LP      +   ++ ++ W                                                        S     R     ++ A  G              +N+ T    G+A   ++V  MF+ NE+LTG+KF YDGNP  FG
Sbjct:    4 KTSKKKPSLAEVMDELQSRFLVNLPESELASSERLFFQIEQCFWFYEDFYADQYAH-LQHVKLNDFARQMFAHCPLLRPLAHRCDELFQDFKTYQRQVPVVGCILLNSARTKLVLVRNWKGTSWTFPRGKVNEGESDMDCARREVLEECGYDVGDNLAPKQYLEFVANDQRMRMYMCPDVPEDYAFAPQTRKEISTIKWFTFDALP-KKTWSVMPFMSRLKRWVKGHKTSKKKSSNSAPNSTGRAASAPRNRPLTLITNGAAQQNTENGKKKNRMERSISTPHNDRPATTGSKKASRGHFGTEFDTATSYDGLNDET---FGNAKKGFSVEEMFSVNERLTGQKFEYDGNPHDFG 353          
The following BLAST results are available for this feature:
BLAST of NO04G03830 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Position :
0
Zoom :
x 1
5001000150020002500300035004000Expect = 8.50e-53 / Id = 37.46Expect = 3.20e-52 / Id = 37.44Expect = 2.10e-51 / Id = 36.06Expect = 1.10e-49 / Id = 35.46Expect = 4.30e-49 / Id = 37.60Expect = 7.40e-49 / Id = 35.41Expect = 9.70e-49 / Id = 32.72Expect = 1.70e-48 / Id = 34.56Expect = 2.80e-48 / Id = 34.27Expect = 3.70e-48 / Id = 34.08SequenceCCI45566.1CBN79148.1CCA20330.1OQR94336.1XP_008606389.1OWZ11721.1XP_008861744.1XP_002906211.1OQS02536.1ETI40052.1
Match NameE-valueIdentityDescription
CCI45566.18.500e-5337.46unnamed protein product [Albugo candida][more]
CBN79148.13.200e-5237.44conserved unknown protein [Ectocarpus siliculosus][more]
CCA20330.12.100e-5136.06mRNA decapping enzyme putative [Albugo laibachii N... [more]
OQR94336.11.100e-4935.46mRNA decapping enzyme [Achlya hypogyna][more]
XP_008606389.14.300e-4937.60hypothetical protein SDRG_02571 [Saprolegnia dicli... [more]
OWZ11721.17.400e-4935.41MRNA decapping enzyme [Phytophthora megakarya][more]
XP_008861744.19.700e-4932.72hypothetical protein H310_00659 [Aphanomyces invad... [more]
XP_002906211.11.700e-4834.56mRNA decapping enzyme [Phytophthora infestans T30-... [more]
OQS02536.12.800e-4834.27mRNA decapping enzyme [Thraustotheca clavata][more]
ETI40052.13.700e-4834.08hypothetical protein F443_14444 [Phytophthora para... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL080nonsL080Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR058ncniR058Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR110ngnoR110Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK009413NSK009413Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO04G03830.1NO04G03830.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO04G03830.1NO04G03830.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO04G03830 ID=NO04G03830|Name=NO04G03830|organism=Nannochloropsis oceanica|type=gene|length=4180bp
ATGGAGACAAAGACATgtaagcaatcggtcaaacagaagaaaaagatttc
aaagcgaagataacgcaaaaaggaggacggtgtgatatccatacatacgc
ttcacgaagctgttggaaatgttttaaccaaacattttgttgcctgactg
cgttgtccggagccatgtcaaggttgggagaggtccccctcctccgggct
atgctctcgaggaggagtttcgtcgttgcttcttgtccccatgtcactct
ctttcttctcatacatggctgtccgctccacgggatgccgtcctctcgga
caagttgccggagcctgcagggagataaggaatggcctgggcctttgggc
gtagcggtgtgcgccttgtgctccttgtcttcactgaagtttcagcgtca
cacgccttggcactttgctcacctatatttctactcccacctcacagGCT
GCACATATACCGGATGGATGTGCATAACGACGTACAGTTCACGTGCGTCA
AAGGAACAGGGAGCGAAACGAGgtacgacgggagcgaatgaggagaaaga
ggagaggggattacagtgactgcggaccctcatacatttccgaagcggcc
gctgagaaggatcctctgatacggaggggacggcaggcatgagcgatccc
ttgtgcatggaggggggtgaatcgggtagctgtttgctgatgcggcttgg
agtctagataaatgagcttgcctctcacaccctcatcctttcctctccca
ctccaacagAACAATCGAACAAGTCACCCGTGCTACTCAGCAATAGCAGC
CGGACCAGCACTAGAACCAGCACCAGTAGCAGCAGCGATAAGACAGCTTT
AGAGCGAGATCTAGCACGACGCCTCAACCTCACCCTCCCTTCTTTTACCA
GCGGGAAGATGACGATTGACGGCAACGGAATCGACAAAATCACGACGACC
ACGGCCACAACGACGCCCACCACCACGATGAGCACCACCAGTCCCACCAA
CAGCAGCTCCAGCAGTGTATCGAGCCACAACTTGGATGGCGGGGAGGAAG
GGACCGTGCGGGAGGAAGGTGGCGGGGAGGCAGGAGCAGGAGGAGCGGCA
GGAAAAGGAGGAGGAAACCCCGCATTTTCGGCAGCAAATACCACTGTTGG
CATGAGGAGCAGCAACAGCAGCCTCACGAGTGGGGGAAGAAGCGCAAAGC
ACCAGATGACATTGGATGCGGCCGTGTTGGAGATAGAGGCTCGATTTTTG
CTTAATTTACCGGAGGAGGAGCTCGCGTCGGTGGAGCGCTTGTTTTTCCA
ACTTGAGCAGGCGCATTGGTACTACGAGGATTTCCTGGCAGACGCTTACC
CAGAGTGCTTACCGCATTTCGAATTGGAGGGATTTACGCGGGCCTTGTTC
ACGCGATCGGAGTGCTTGCAGCACTTGCAGGAGGGGCATGCGGACCTCGT
CAAGGCTTTTAACAGCTACAAGTACGCGGTGCCGGTGTATGGGTGTGTGT
GTCTCAACCCGGAGCAAGATAAGGTTCTGTTGGTGTGCAACTGGGGGGGG
GACTCGTGGGGCTTTCCCAAAGGGAAGATCAATGAGGGCGAGGCCCCGGC
GGAATGCGCGGCGAGAGAGGTGGAGGAAGAGACCGGGTACGACGTGCGTC
CTCTCTTACGGGAGGAAGACTCGTTCACCATGGTCCAGAACGCCAAGAAA
CTGCACTTTTACATCATCCAGGACGTGCCGGAGACGTTCCGGTTCGAGCC
TCAAGTGAGAAAGGAGGTGAGTGAGATAAAGTTTTGGCCTTTGGACGATT
TGCCCGGCAACAGCAATAGGGGCCTGACCCGATGCCTGGCCCATGTCCGG
CATTGGCAAGAGCGGAAGAAGAAGAAGAAGAATGAGAAGAAGGGAGGTGG
GAAGAAGCAGAAGAAGCAGCAGCAGCCAATGCAGCGGGCGTCGAGCGTGG
GAAGGAAGGGACGAGGAGGGGAAGCAAGGGCACAGTCGGCGCCGGGGGGT
AGGAAGGGAGGGAGGGACGGAGAAAAAGAGGCACAGGCGGATGTGAATAA
TCTGACGACGTTTGGGGCGGGGGACGCGGGGAGCGATTGGAATGTGAATG
CCATGTTTGCGGCGAACGAAAAATTGACAGGAAGGAAGTTTACTTATGAT
GGGAATCCGCAGAAGTTTGGTGACAATGTCCAGCAGCAGCAGCTGCAGCA
GGAGGGGGGGGGTCAGGAGAGGGAGCGGGCGGCATCCACGTCGGCGGTCA
TGTTGTCTTCGGGCAAGGGGGTGGTCGCGCGACGATTGGAAGAGATCGAA
GGACGGCACACTTCTACTGCTACTGCTTCCTCCTCCCCTTCCTCTCCCTC
GACCACGGCTTATCTCGCTCCCTCCGTTGCCTCGTTGCTTGGCTTTTCGC
AATCTGCAACGGCCACAAAGGTAGCATCTGCCCCTGTCGTTTATTCCTGT
TGGGACTTGGAGAGGCGTGCCAGTGCTGGTAGCGTGGGGGAGGCGACTGC
GAAGGGGGAAAGGAAGGGGGAGGGAGGGAATGGTGGCGTCGGCATGGAGT
TTACCTTCGACACGCAGGATATTTTGTCAGCTTTAGACTTCTAAGACACA
AGGGTTGGAGGAAGGAAGGAGAGGAGGTTGATTATTCAATTGGCATAGGA
GAAAAACGGAGGGAAGGAAGTAGGGAAGGGGAATTTTCAGAGAACAGGCG
GACTAGAGGCGCGTCCAAGGATCTTTATAGTGAGAGGGGAAAGAGGAAGC
GAAGGCTAGGAAGGGGGGCACGAGAGCTTGTAAGACACAGGGAAGGAGGG
ATGTACCTAACCCTACCCTGATGGCACCGTTAAGCCTCCAGGCATACAGT
GCATATACATAAGGAGTAAGGAGGGTGTTCTTACACTAGCACCACCCCGC
CATTCAGGAGAGAGGAAAGGAGTGAAGAATGGATTTGTAATAGGATGATG
GGAAGGGTGGAAGAAAGGAACGATGGGCTTCAGTCGGGTCCTCATTTACC
AGTGGCCCGACCGTAAGACCCCACGCTGGACACAATTTACAGACGGGAGG
AGAGGGGGAATTGGAGAAATAGATATTTACAAATAAATTGTATTTCATGC
GGCTCCAGATGGAAGAGGAGGAAGAAGAGATGAGAGGAAAGATATTGAAG
AGAAAGAGGAGGAAGGGGAGAAAATGAGAAAGTCTGTCACCACAAGAACT
AGCAGCAGCAGCTCAAGACATACATACATCGCGCGTCGCTATCACCAGTA
TTCGTCAGCAGCGGCTGCAGCAGCAGTGATAGGAGCATCGCCGTCATCAC
ACACAAGCGGGGGAGAGATGCGACTTATGGAGGCAGGAAACGAGGAGAGG
CACCGCAAAGGGTCTTTACTCGTCCTTGACTTCTCTCTCCCCCATCCACA
CCCCATGCATACGAGATGTCAATCGCCTTTGACCCTCTTCGCCCGCACGC
ACACGCTAAATCGTAGCTTGTCGTGCTTCTTGCTTCACTTTACTTTTATG
TTCATTTTTCTGTTTCGCCTTTTGGGATTGATTGTTTGCGCTTATTCTTG
CAACCGAAACCAGTATCTATCCATTTACTAACTACTCTAATCTATACGTG
GGCATCCACAGGCACACGCTGAGGGCAGAGGCCCCTTTACACTCGAATAT
ACACGCATATACACAGCTATGGGTTGAAGCCAGGCTTGCACGCGGTGATG
AAAGGGGGGAGGGGCGGGAAGGAATCAGTTGAAGTCGACAAGGCAGAGCC
TGGAGGATTTAAGCGACGAGCAGGCACGAGGGGGCTGCGTGGCTGCTTCT
TTGAGCACCAACACACAACGTGTCGAAAGAAAGGAGGAGAAGAAAAGAGG
ACAGATTGATTGGCTTGGTGCAAGGAAAGTAAATTCAAGAAAGAAAGAAA
ATAAGAGTTTTCGTCTCGATTGCTCAAATATCTGGCAACTCCGTAAGTTT
TGTCTTCATAGTTACATCAACTGCTGCCTCCCTTCCTCCTCCTCACCCTC
CCTTATCAACAACCGCTCGTATCGCTCTCCACCCCTCCCTCCTTCTCTCA
TTTCGCGAGGGGATGCCAAAGCGTTCGCACCACGTGTCACACTCGCTGTT
CCCGTCGGACTGATCGTCATTTCATAGTCCACCTGCTGCGGCCGCCTCAC
CATCAGCCCTCCTCCTCCCTCCCTCCCTCC
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protein sequence of NO04G03830.1

>NO04G03830.1-protein ID=NO04G03830.1-protein|Name=NO04G03830.1|organism=Nannochloropsis oceanica|type=polypeptide|length=642bp
METKTCCTYTGWMCITTYSSRASKEQGAKREQSNKSPVLLSNSSRTSTRT
STSSSSDKTALERDLARRLNLTLPSFTSGKMTIDGNGIDKITTTTATTTP
TTTMSTTSPTNSSSSSVSSHNLDGGEEGTVREEGGGEAGAGGAAGKGGGN
PAFSAANTTVGMRSSNSSLTSGGRSAKHQMTLDAAVLEIEARFLLNLPEE
ELASVERLFFQLEQAHWYYEDFLADAYPECLPHFELEGFTRALFTRSECL
QHLQEGHADLVKAFNSYKYAVPVYGCVCLNPEQDKVLLVCNWGGDSWGFP
KGKINEGEAPAECAAREVEEETGYDVRPLLREEDSFTMVQNAKKLHFYII
QDVPETFRFEPQVRKEVSEIKFWPLDDLPGNSNRGLTRCLAHVRHWQERK
KKKKNEKKGGGKKQKKQQQPMQRASSVGRKGRGGEARAQSAPGGRKGGRD
GEKEAQADVNNLTTFGAGDAGSDWNVNAMFAANEKLTGRKFTYDGNPQKF
GDNVQQQQLQQEGGGQERERAASTSAVMLSSGKGVVARRLEEIEGRHTST
ATASSSPSSPSTTAYLAPSVASLLGFSQSATATKVASAPVVYSCWDLERR
ASAGSVGEATAKGERKGEGGNGGVGMEFTFDTQDILSALDF*
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Synonyms
Publications