NO04G03800, NO04G03800 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO04G03800 vs. NCBI_GenBank
Match: EWM28703.1 (sulfate permease family [Nannochloropsis gaditana]) HSP 1 Score: 286.2 bits (731), Expect = 1.200e-73 Identity = 177/302 (58.61%), Postives = 195/302 (64.57%), Query Frame = 0 Query: 1 MSFQDVAGHQHSNENRFGSSNNGQGRRQYCNRVPISSTTSVMHA---GSGRXXXXXXXXXXXXXXXXXXXXXPPLREALLAYQQQVQLYEKLARVLGGPRDDAELRSQLLAQECVVKEVGARVEQQISTQIRAVEGLPTKGEKDRTKAEIQKMSKDAQRLKLRFENFGRGTAARIRELDLVGRRAEALFDGGSENGRIGGEXXXXXXXXXXXXXXXXXXXXXXXXXDLDERLLQEREAEIVLINQSVVKVNEIFRDLGQLVSRQQEDIDVIEQNVQHSHAAAKSGLEQVEKAAKYQAGCILS 300 MSFQDVA H HS EN G+ N G +Y N ++S V G PPLR ALL YQQQVQL+EKL+RVLGGPRDD+ELRSQL AQ VVKEVG+RVEQ + Q+R+VEG+ +K EKD+ + E+QKMSKDAQRLKLRFEN R TA R+REL L GRRAE L G G E DLDERLLQERE EIV INQSVVKVNEIFRDLG+LVSRQQEDID IEQNVQHSHAAAKSGLEQV KAAKYQAGC LS Sbjct: 1 MSFQDVASHSHSYEN--GAMNGGV---RYGNGGALTSKPVVTFGESNGRSIYASGSRSATNGSTDHTPGSSVPPLRHALLQYQQQVQLFEKLSRVLGGPRDDSELRSQLQAQGSVVKEVGSRVEQLVHAQLRSVEGVRSKAEKDKARLEVQKMSKDAQRLKLRFENLERATAVRLRELKLAGRRAEDLLRGSGMGN--GDEPGAGGGGQLMERQHGQQEMQLLQAEDLDERLLQEREEEIVAINQSVVKVNEIFRDLGELVSRQQEDIDAIEQNVQHSHAAAKSGLEQVAKAAKYQAGCSLS 295
BLAST of NO04G03800 vs. NCBI_GenBank
Match: XP_009037166.1 (hypothetical protein AURANDRAFT_71610 [Aureococcus anophagefferens] >EGB08451.1 hypothetical protein AURANDRAFT_71610 [Aureococcus anophagefferens]) HSP 1 Score: 85.9 bits (211), Expect = 2.300e-13 Identity = 79/267 (29.59%), Postives = 117/267 (43.82%), Query Frame = 0 Query: 72 LREALLAYQQQVQLYEKLA-RVLGGPRDDAELRSQLLAQECVVKEVGARVEQQISTQIRAVEGLPTKGEKDRTKAEIQKMSKDAQRLKLRFENFGRGTAARI----------------------------------RELDLVGRRAEALFDGGSENGRIG----GEXXXXXXXXXXXXXXXXXXXXXXXXXDLDERLLQEREAEIVLINQSVVKVNEIFRDLGQLVSRQQEDIDVIEQNVQHSHAAAKSGLEQVEKAAKYQAGCILS 300 + E L + V L E+LA + G PR EL Q+ AQ+ VV+E+ + + +R V+ P + E+ R +A K+ KD R+ +GT R R+L + + GG R+G G +++ +L+ERE EI INQ+V KVNEIFRDL LV +QQ ++D I + V+ SHA A+ GL+QV+KAAK Q C++S Sbjct: 44 IAENLRQFSHNVSLLERLADHLAGAPRASEELLRQIAAQQDVVEELARVLRKAFGDLVRRVDAAP-RAEQGRARAAHAKLRKDFDRV--------QGTVGRAVDKIKSXXXXXXXXXXXXXXXXXXXXXXXXXXDHRDLRVAVNDRPSSSSGGPH--RVGRAQFGPSDAPGDLDVMIGEERVQLQVAMQEEAINDAILREREEEIREINQNVHKVNEIFRDLATLVDKQQGEVDQIGELVEKSHAHAEKGLDQVQKAAKLQPSCVVS 299
BLAST of NO04G03800 vs. NCBI_GenBank
Match: CBJ30548.1 (Soluble NSF Attachment Protein (SNAP) Receptor (SNARE) [Ectocarpus siliculosus]) HSP 1 Score: 79.7 bits (195), Expect = 1.700e-11 Identity = 88/223 (39.46%), Postives = 124/223 (55.61%), Query Frame = 0 Query: 77 LAYQQQVQLYEKLARVLGGPRDDAELRSQLLAQECVVKEVGARVEQQISTQIRAVEGLPTKGEKDRTKAEIQKMSKDAQRLKLRFENFGRGTAARIRELDLVGRRAEALFDGGSENGRIGGEXXXXXXXXXXXXXXXXXXXXXXXXXDLDERLLQEREAEIVLINQSVVKVNEIFRDLGQLVSRQQEDIDVIEQNVQHSHAAAKSGLEQVEKAAKYQAGCILS 300 + Y Q V L ++ + LG RD ELR Q Q V+ E+ +++ Q+ Q + EG ++ + R A K++KD R+ + GT A R XXXXXXXXXXXXXXXXXXXXXXXX ++ ++QE E E+ IN+S+ KVNEI+RDL +V +QQE ++ IE N + +HA A+ GL QV+KA YQ C++S Sbjct: 1 MIYSQNVTLLHRMVQQLGTARDTGELRGQCRCQLQVIGELREKIQAQMRLQQQQAEG-ASRQDAARLSAMNSKLTKDFNRVNAIALDL--GTQAE-RXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAINTAIIQETEEELQQINKSLYKVNEIYRDLANIVEQQQEAVEEIETNTEGAHARAQEGLVQVQKANDYQPSCVVS 219
BLAST of NO04G03800 vs. NCBI_GenBank
Match: XP_002296728.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED86929.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 75.5 bits (184), Expect = 3.200e-10 Identity = 72/223 (32.29%), Postives = 124/223 (55.61%), Query Frame = 0 Query: 80 QQQVQLYEKLARVLGGPRDDAELRSQLLAQECVVKEVGARVEQQISTQIRAVEGLPTKGEKDRTKAEIQKMSKDAQRLKLRFENFGRGTAARIRELDLVGRRAEALFDGGSENGRIGGEXXXXXXXXXXXXXXXXXXXXXXXXXD--LDERLLQEREAEIVLINQSVVKVNEIFRDLGQLVSRQQEDIDVIEQNVQHSHAAAKSGLEQVEKA-AKYQAGCILS 300 Q+ V L EK+AR +G D++ L++Q Q V++++G R+E+Q+ +Q + LP + E +++ K+S+D + ++ +F+N +LD+ +R XXXXXXXXXXXX + ++E +++EREAEI I++ + +VNEI++DL LV QQE +D IE ++++ SGL+ +EKA Q+ C++S Sbjct: 202 QRNVALLEKMARSVGTKNDNSVLQTQYNLQLDVIRQLGTRIEKQLQSQESRLSTLP-RTEAAQSRTTHVKLSRDYRLVEQQFKNV---------QLDVKKKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGDEVMRRQMQIQEDRINEEIMREREAEIRNIHKGMHQVNEIYKDLAHLVDNQQEGVDQIETQMENTKENTASGLKHIEKANESQQSQCVVS 414
BLAST of NO04G03800 vs. NCBI_GenBank
Match: XP_024063625.1 (syntaxin-7 [Terrapene mexicana triunguis]) HSP 1 Score: 64.7 bits (156), Expect = 5.600e-7 Identity = 51/207 (24.64%), Postives = 94/207 (45.41%), Query Frame = 0 Query: 87 EKLARVLGGPRDDAELRSQLLAQECVVKEVGARVEQQISTQIRAVEGLPTKGEKDRTKAEIQKMSKDAQRLKLRFENFGRGTAARIRELDLVGRRAEALFDGGSENGRIGGEXXXXXXXXXXXXXXXXXXXXXXXXXDLDERLLQEREAEIVLINQSVVKVNEIFRDLGQLVSRQQEDIDVIEQNVQHSHAAAKSGLEQVEKAAKYQ 294 +++ LG P+D ELR QL ++ ++ ++ I+ LP E+ + K + ++ + F+ R A + ++L R + + G SE+G G + D RL++ERE+ I + ++ +NEIF+DLG ++ Q + ID IE NV+++ + G +Q+ +AA YQ Sbjct: 107 QRILHQLGTPQDTPELRQQLQQKQQHTNQLAKETDK----NIKEFGSLPATSEQRQRKIQKDRLVAEFSTALANFQRIQRQAAEKEKDLVARVRASSRVSAGPSEDGYKEG-------TLVSWDSQPQAQVQDEDITEDDLRLIEERESSIRQLEADIMDINEIFKDLGMMIHEQGDVIDSIEANVENADVHVQQGNQQLSRAADYQ 302
BLAST of NO04G03800 vs. NCBI_GenBank
Match: XP_018551675.1 (PREDICTED: syntaxin-7 [Lates calcarifer]) HSP 1 Score: 63.9 bits (154), Expect = 9.500e-7 Identity = 53/207 (25.60%), Postives = 93/207 (44.93%), Query Frame = 0 Query: 87 EKLARVLGGPRDDAELRSQLLAQECVVKEVGARVEQQISTQIRAVEGLPTKGEKDRTKAEIQKMSKDAQRLKLRFENFGRGTAARIRELDLVGRRAEALFDGGSENGRIGGEXXXXXXXXXXXXXXXXXXXXXXXXXDLDERLLQEREAEIVLINQSVVKVNEIFRDLGQLVSRQQEDIDVIEQNVQHSHAAAKSGLEQVEKAAKYQ 294 ++ +LG +D ++LR L ++ + G ++ + I+A LP ++ + K + ++ D F+ R A R RE + RA + GG G + D RL+QERE+ I + + +N+IF+DLG +V Q + ID IE NV+++ +SG +Q+ +AA+YQ Sbjct: 33 QRAVSLLGTEQDSSQLRQSLQQKQ----QQGNQLAKDTDRLIKAFAALPVGPDQRQRKIQKDRLLNDFSAALNSFQKTQRQAADREREF-VARVRASSRVSGGQPEDNFGN--------ASPFQSDSQVQAQTEAITEEDLRLIQERESAIRQLEADITDINDIFKDLGMMVHEQGDMIDSIEANVENADVNVQSGTQQLARAAEYQ 226 The following BLAST results are available for this feature:
BLAST of NO04G03800 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 6
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO04G03800 ID=NO04G03800|Name=NO04G03800|organism=Nannochloropsis oceanica|type=gene|length=900bpback to top protein sequence of NO04G03800.1 >NO04G03800.1-protein ID=NO04G03800.1-protein|Name=NO04G03800.1|organism=Nannochloropsis oceanica|type=polypeptide|length=300bpback to top Synonyms
Publications
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