NO04G03790, NO04G03790 (gene) Nannochloropsis oceanica

Overview
NameNO04G03790
Unique NameNO04G03790
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1383
Alignment locationchr4:1022708..1024090 -

Link to JBrowse

Properties
Property NameValue
DescriptionGeranylgeranyl pyrophosphate synthase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr4genomechr4:1022708..1024090 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0008299isoprenoid biosynthetic process
GO:0009987cellular process
GO:0009058biosynthetic process
GO:0006629lipid metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR008949Isoprenoid_synthase_dom
IPR000092Polyprenyl_synt
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
Homology
BLAST of NO04G03790 vs. NCBI_GenBank
Match: EWM28774.1 (geranylgeranyl pyrophosphate synthase [Nannochloropsis gaditana])

HSP 1 Score: 548.1 bits (1411), Expect = 2.100e-152
Identity = 312/385 (81.04%), Postives = 320/385 (83.12%), Query Frame = 0
Query:    1 MVGFTTSTCLVLSLAALSSTPTAAFQP-LXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLDLNKYLTEKKGAVELALDLSLQATCPEVAKITESMRYSLLAGGKRIRPIMCLAACEMAGGTAEDAMAAAVALEMIHTMSLIHDDLPSMDNDSLRRGKPTNHVIYGEDVAILAGDALLSTAFEHVAKHTPAHIPAERVVSVIARLAASVGATGLAGGQVMDLECEGKQGVGLQELTWIHTHKTAALLKVSVAAGAILGGASPEEVEACETYALDIGLAFQVADDILDVTASTEALGKTAGKDLNMDKTTYPKLLGLEGSREEARRLVKEAKAALARFGGRAGPLLAIADYIVEREN 385
            MVGFTTSTCLVLSLAALS T T AFQP                                              XXXXXXXXXXX      DLNKYL +KK AVE ALD SLQ T P+VAKITESMRYSLLAGGKRIRPIMC+AACEMAGGTAEDAMAAAVALEMIHTMSLIHDDLPSMDNDSLRRGKPTNHVIYGEDVAILAGDALLSTAFEHVAKHTP+H+PAERVVSVIARLAASVGATGLAGGQVMDLECEGK+GVGL+ELTWIHTHKTAALLKVSVAAGAILGGAS EEVEACETYALDIGLAFQVADDILDVTASTEALGKTAGKDLNMDKTTYPKLLGLEGSREEARRLV EAKAAL RFGGRA PLLAIADYIVER+N
Sbjct:    1 MVGFTTSTCLVLSLAALSGTRTTAFQPAARPPASSCHSGTPSVSGPCSTNTRRHPRGWVMAAAATTADAHSTSXXXXXXXXXXXSSLPAFDLNKYLLDKKDAVESALDASLQVTSPQVAKITESMRYSLLAGGKRIRPIMCIAACEMAGGTAEDAMAAAVALEMIHTMSLIHDDLPSMDNDSLRRGKPTNHVIYGEDVAILAGDALLSTAFEHVAKHTPSHVPAERVVSVIARLAASVGATGLAGGQVMDLECEGKEGVGLEELTWIHTHKTAALLKVSVAAGAILGGASAEEVEACETYALDIGLAFQVADDILDVTASTEALGKTAGKDLNMDKTTYPKLLGLEGSREEARRLVGEAKAALGRFGGRAAPLLAIADYIVERKN 385          
BLAST of NO04G03790 vs. NCBI_GenBank
Match: EWM28775.1 (geranylgeranyl pyrophosphate synthase [Nannochloropsis gaditana])

HSP 1 Score: 534.6 bits (1376), Expect = 2.400e-148
Identity = 277/295 (93.90%), Postives = 285/295 (96.61%), Query Frame = 0
Query:   90 DLNKYLTEKKGAVELALDLSLQATCPEVAKITESMRYSLLAGGKRIRPIMCLAACEMAGGTAEDAMAAAVALEMIHTMSLIHDDLPSMDNDSLRRGKPTNHVIYGEDVAILAGDALLSTAFEHVAKHTPAHIPAERVVSVIARLAASVGATGLAGGQVMDLECEGKQGVGLQELTWIHTHKTAALLKVSVAAGAILGGASPEEVEACETYALDIGLAFQVADDILDVTASTEALGKTAGKDLNMDKTTYPKLLGLEGSREEARRLVKEAKAALARFGGRAGPLLAIADYIVEREN 385
            DLNKYL +KK AVE ALD SLQ T P+VAKITESMRYSLLAGGKRIRPIMC+AACEMAGGTAEDAMAAAVALEMIHTMSLIHDDLPSMDNDSLRRGKPTNHVIYGEDVAILAGDALLSTAFEHVAKHTP+H+PAERVVSVIARLAASVGATGLAGGQVMDLECEGK+GVGL+ELTWIHTHKTAALLKVSVAAGAILGGAS EEVEACETYALDIGLAFQVADDILDVTASTEALGKTAGKDLNMDKTTYPKLLGLEGSREEARRLV EAKAAL RFGGRA PLLAIADYIVER+N
Sbjct:   32 DLNKYLLDKKDAVESALDASLQVTSPQVAKITESMRYSLLAGGKRIRPIMCIAACEMAGGTAEDAMAAAVALEMIHTMSLIHDDLPSMDNDSLRRGKPTNHVIYGEDVAILAGDALLSTAFEHVAKHTPSHVPAERVVSVIARLAASVGATGLAGGQVMDLECEGKEGVGLEELTWIHTHKTAALLKVSVAAGAILGGASAEEVEACETYALDIGLAFQVADDILDVTASTEALGKTAGKDLNMDKTTYPKLLGLEGSREEARRLVGEAKAALGRFGGRAAPLLAIADYIVERKN 326          
BLAST of NO04G03790 vs. NCBI_GenBank
Match: XP_009033669.1 (hypothetical protein AURANDRAFT_52464 [Aureococcus anophagefferens] >EGB11284.1 hypothetical protein AURANDRAFT_52464 [Aureococcus anophagefferens])

HSP 1 Score: 402.1 bits (1032), Expect = 1.900e-108
Identity = 210/296 (70.95%), Postives = 239/296 (80.74%), Query Frame = 0
Query:   90 DLNKYLTEKKGAVELALDLSLQATCPEVAKITESMRYSLLAGGKRIRPIMCLAACEMAGGTAEDAMAAAVALEMIHTMSLIHDDLPSMDNDSLRRGKPTNHVIYGEDVAILAGDALLSTAFEHVAKHTPAH-IPAERVVSVIARLAASVGATGLAGGQVMDLECEGKQGVGLQELTWIHTHKTAALLKVSVAAGAILGGASPEEVEACETYALDIGLAFQVADDILDVTASTEALGKTAGKDLNMDKTTYPKLLGLEGSREEARRLVKEAKAALARFGGRAGPLLAIADYIVEREN 385
            DL  Y  +K  AVE ALD SL  T PE   I ESMRYSLLAGGKR+RP+MC+AACEM GGT   AM  AVA+EMIHTMSLIHDDLP+MDND LRRG PTNHVIYG+DVAILAGDALLST+FEH A  + A  IPAER+V  I RL  +VGA GLAGGQVMDLECE K GV L+ELTWIHTHKTA LL+VSVAAGA+L GA+ ++V  CETYA DIG+AFQVADDILDVTA++E LGKTAGKD + DKTTYPKL+GL+G+R EA RL  EA  +LA +G +A PL+AIA YIVER+N
Sbjct:   57 DLKAYFAQKVAAVEKALDESLTCTTPETKIIVESMRYSLLAGGKRVRPVMCIAACEMFGGTEAMAMPTAVAIEMIHTMSLIHDDLPAMDNDDLRRGMPTNHVIYGDDVAILAGDALLSTSFEHCAVGSTAEGIPAERIVETIRRLGEAVGAVGLAGGQVMDLECEAKSGVSLEELTWIHTHKTAKLLEVSVAAGAVLAGAAKDDVRQCETYANDIGIAFQVADDILDVTATSEMLGKTAGKDEDTDKTTYPKLMGLDGARAEADRLYSEAIDSLAPYGEKAVPLIAIAKYIVERQN 352          
BLAST of NO04G03790 vs. NCBI_GenBank
Match: XP_002288339.1 (geranylgeranyl pyrophosphate synthetase [Thalassiosira pseudonana CCMP1335] >EED93775.1 geranylgeranyl pyrophosphate synthetase [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 402.1 bits (1032), Expect = 1.900e-108
Identity = 205/297 (69.02%), Postives = 246/297 (82.83%), Query Frame = 0
Query:   88 TLDLNKYLTEKKGAVELALDLSLQATCPEVAKITESMRYSLLAGGKRIRPIMCLAACEMAGGTAEDAMAAAVALEMIHTMSLIHDDLPSMDNDSLRRGKPTNHVIYGEDVAILAGDALLSTAFEHVAKHTPAHIPAERVVSVIARLAASVGATGLAGGQVMDLECEGKQGVGLQELTWIHTHKTAALLKVSVAAGAILGGASPEEVEACETYALDIGLAFQVADDILDVTASTEALGKTAGKDLNMDKTTYPKLLGLEGSREEARRLVKEAKAALARFGGRAGPLLAIADYIVEREN 385
            +  L++YL  K G +E AL+ S+++  P+  KI ESM YSL+AGGKRIRP++C+AACEM GG+ + AM  AVALEMIHTMSLIHDDLPSMDND LRRGKPTNHV++GEDVAILAGD+LLST+FEHVA+ T   + AE++V VIARL  SVGA GLAGGQVMDLECE K G  L +L WIH HKTA LL+V+VA+GA+LGGA+PEEV ACE +A++IGLAFQVADDILDVTAS+E LGKTAGKD   DKTTYPKLLGLE S+  AR+L+ EAK +LA FG RA PLLAIAD+I++R+N
Sbjct:   44 SFSLDEYLASKIGPIESALEASVKSRIPQTDKICESMAYSLMAGGKRIRPVLCIAACEMFGGSQDVAMPTAVALEMIHTMSLIHDDLPSMDNDDLRRGKPTNHVVFGEDVAILAGDSLLSTSFEHVARETKG-VSAEKIVDVIARLGKSVGAEGLAGGQVMDLECEAKPGTTLDDLKWIHIHKTATLLQVAVASGAVLGGATPEEVAACELFAMNIGLAFQVADDILDVTASSEDLGKTAGKDEATDKTTYPKLLGLEESKAYARQLIDEAKESLAPFGDRAAPLLAIADFIIDRKN 339          
BLAST of NO04G03790 vs. NCBI_GenBank
Match: XP_002178555.1 (farnesyltranstransferase [Phaeodactylum tricornutum CCAP 1055/1] >EEC50220.1 farnesyltranstransferase [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 391.7 bits (1005), Expect = 2.600e-105
Identity = 206/296 (69.59%), Postives = 242/296 (81.76%), Query Frame = 0
Query:   90 DLNKYLTEKKGAVELALDLSLQATCPEVAKITESMRYSLLAGGKRIRPIMCLAACEMAG-GTAEDAMAAAVALEMIHTMSLIHDDLPSMDNDSLRRGKPTNHVIYGEDVAILAGDALLSTAFEHVAKHTPAHIPAERVVSVIARLAASVGATGLAGGQVMDLECEGKQGVGLQELTWIHTHKTAALLKVSVAAGAILGGASPEEVEACETYALDIGLAFQVADDILDVTASTEALGKTAGKDLNMDKTTYPKLLGLEGSREEARRLVKEAKAALARFGGRAGPLLAIADYIVEREN 385
            DLN+Y+ +K   +E ALD S+ +T  E  KI E+M+YSL+AGGKRIRP++CLAACEM   G +  AM AAV+LEMIHTMSLIHDDLPSMDND LRRGKPT HVIYGEDVAILAGDALLS +F HVA+ T   + A+RV+ V+ RL  SVGA GLAGGQVMDLECEGK    L++L WIHTHKTA LL+V+VA+GAI+GGAS EEV+ACE +AL+IGLAFQVADDILDVT STE LGKTAGKD + DKTTYPKLLGL+G+REEA RLV EAK +L  FG RA  LLA+AD+I+ R+N
Sbjct:   43 DLNQYIADKLPLIEKALDESVVSTEKETEKIVEAMKYSLMAGGKRIRPVLCLAACEMFNDGDSTPAMPAAVSLEMIHTMSLIHDDLPSMDNDDLRRGKPTCHVIYGEDVAILAGDALLSDSFRHVAEQTKG-VAADRVLDVVVRLGRSVGAKGLAGGQVMDLECEGKGSATLEDLRWIHTHKTATLLQVAVASGAIIGGASAEEVKACEQFALNIGLAFQVADDILDVTQSTEELGKTAGKDEDTDKTTYPKLLGLDGAREEAERLVAEAKKSLEPFGDRATALLALADFIINRKN 337          
BLAST of NO04G03790 vs. NCBI_GenBank
Match: XP_005779411.1 (geranylgeranyl pyrophosphate synthase [Emiliania huxleyi CCMP1516] >EOD26982.1 geranylgeranyl pyrophosphate synthase [Emiliania huxleyi CCMP1516])

HSP 1 Score: 384.0 bits (985), Expect = 5.300e-103
Identity = 202/295 (68.47%), Postives = 231/295 (78.31%), Query Frame = 0
Query:   90 DLNKYLTEKKGAVELALDLSLQATCPEVAKITESMRYSLLAGGKRIRPIMCLAACEMAGGTAEDAMAAAVALEMIHTMSLIHDDLPSMDNDSLRRGKPTNHVIYGEDVAILAGDALLSTAFEHVAKHTPAHIPAERVVSVIARLAASVGATGLAGGQVMDLECEGKQGVGLQELTWIHTHKTAALLKVSVAAGAILGGASPEEVEACETYALDIGLAFQVADDILDVTASTEALGKTAGKDLNMDKTTYPKLLGLEGSREEARRLVKEAKAALARFGGRAGPLLAIADYIVEREN 385
            DL  Y+ EK+   E ALD SL++TC +   I ESMRYSLLAGGKR+RP++CLAA EM GG    A   AV+LEMIHTMSLIHDDLP+MDND  RRGKPTNHV+YG+DVAILAGDA+LSTAFE+VA +T   + AERVV V+  L  SVG  GLAGGQVMDL+CEG+  VG+  L WIHT+KTAALLK +V  GA L GAS E++  CETYA  IGLAFQVADDILDVTASTE LGKTAGKDL+ DKTTYPKLLGL+ SRE AR LV EAKAAL  +G RA PLL +ADYI+ R N
Sbjct:   43 DLKAYMEEKRVYTEEALDASLRSTCSQTDLIVESMRYSLLAGGKRVRPMLCLAATEMLGGDISVATPTAVSLEMIHTMSLIHDDLPAMDNDDFRRGKPTNHVLYGDDVAILAGDAMLSTAFEYVAANTKG-VAAERVVQVLRMLGESVGPMGLAGGQVMDLKCEGQPDVGIDTLQWIHTYKTAALLKAAVCCGAALAGASDEDLARCETYANKIGLAFQVADDILDVTASTEELGKTAGKDLDADKTTYPKLLGLDRSREVARELVDEAKAALEPYGERAAPLLGLADYIISRSN 336          
BLAST of NO04G03790 vs. NCBI_GenBank
Match: GAX20190.1 (geranylgeranyl diphosphate synthase, type II [Fistulifera solaris])

HSP 1 Score: 377.9 bits (969), Expect = 3.800e-101
Identity = 197/297 (66.33%), Postives = 239/297 (80.47%), Query Frame = 0
Query:   90 DLNKYLTEKKGAVELALDLSLQATCPEVAKITESMRYSLLAGGKRIRPIMCLAACEMAGGTAEDAMAAAVALEMIHTMSLIHDDLPSMDNDSLRRGKPTNHVIYGEDVAILAGDALLSTAFEHVAKHTPAHIPAERVVSVIARLAASVGATGLAGGQVMDLECEGKQ--GVGLQELTWIHTHKTAALLKVSVAAGAILGGASPEEVEACETYALDIGLAFQVADDILDVTASTEALGKTAGKDLNMDKTTYPKLLGLEGSREEARRLVKEAKAALARFGGRAGPLLAIADYIVEREN 385
            +LN+Y+ +K   VE ALD SL +  P+ A+I E+M+YSL+AGGKRIRP++CLAACEM       AM AAVALEMIHTMSLIHDDLP++DND LRRGKPTNHV+YGEDVAILAGDALL+ +F HVA++     P ERV+ VI RL  + G  GLAGGQ+MDLECEGK    V L +L WIHTHKTA LL+V+VA+GAILGGASP +VE  E +AL++GLAFQVADDILDVT STE LGKTAGKD N DKTTYPKLLGL+G+R EA RL++EAK +L  +G +A PLLA+AD+I++R+N
Sbjct:   46 NLNEYIMDKLPHVEKALDESLASDIPQTARIVEAMKYSLMAGGKRIRPVLCLAACEMFDENFHKAMPAAVALEMIHTMSLIHDDLPALDNDDLRRGKPTNHVVYGEDVAILAGDALLAQSFLHVAENCNDQ-PPERVLDVIRRLGHAFGPKGLAGGQMMDLECEGKPTGEVSLDDLRWIHTHKTAVLLEVAVASGAILGGASPADVERLEKFALNVGLAFQVADDILDVTQSTEELGKTAGKDENTDKTTYPKLLGLDGARAEAERLIQEAKKSLEPYGDKAVPLLALADFIIDRKN 341          
BLAST of NO04G03790 vs. NCBI_GenBank
Match: GAX25496.1 (geranylgeranyl diphosphate synthase, type II [Fistulifera solaris])

HSP 1 Score: 371.7 bits (953), Expect = 2.700e-99
Identity = 195/297 (65.66%), Postives = 237/297 (79.80%), Query Frame = 0
Query:   90 DLNKYLTEKKGAVELALDLSLQATCPEVAKITESMRYSLLAGGKRIRPIMCLAACEMAGGTAEDAMAAAVALEMIHTMSLIHDDLPSMDNDSLRRGKPTNHVIYGEDVAILAGDALLSTAFEHVAKHTPAHIPAERVVSVIARLAASVGATGLAGGQVMDLECEGKQ--GVGLQELTWIHTHKTAALLKVSVAAGAILGGASPEEVEACETYALDIGLAFQVADDILDVTASTEALGKTAGKDLNMDKTTYPKLLGLEGSREEARRLVKEAKAALARFGGRAGPLLAIADYIVEREN 385
            +LN+Y+ +K   VE ALD SL +  P+ A+I E+M+YSL+AGGKRIRP++CLAACEM       AM AAVALEMIHTMSLIHDDLP++DND LRRGKPTNHV+YGEDVAILAGDALL+ +F HVA++     P ERV+ VI RL  + G  GLAGGQ+MDLECEGK    V L +L WIHTHKTA LL+V+VA+GAILGGAS  +VE  E +AL++GLAFQVADDILDVT STE LGKTAGKD N DKTTYPKLLGL+G+R EA RL++EAK +L  +G +A  LLA+AD+I++R+N
Sbjct:   46 NLNEYIMDKLPHVEKALDESLASDIPQTARIVEAMKYSLMAGGKRIRPVLCLAACEMFDENFHKAMPAAVALEMIHTMSLIHDDLPALDNDDLRRGKPTNHVVYGEDVAILAGDALLAQSFLHVAENCNDQ-PPERVLDVIRRLGHAFGPKGLAGGQMMDLECEGKPTGEVSLDDLRWIHTHKTAVLLEVAVASGAILGGASAADVERLEKFALNVGLAFQVADDILDVTQSTEELGKTAGKDENTDKTTYPKLLGLDGARAEAERLIQEAKKSLEPYGDKAVTLLALADFIIDRKN 341          
BLAST of NO04G03790 vs. NCBI_GenBank
Match: CEM36608.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 361.7 bits (927), Expect = 2.800e-96
Identity = 189/297 (63.64%), Postives = 233/297 (78.45%), Query Frame = 0
Query:   90 DLNKYLTEKKGAVELALDLSLQ--ATCPEVAKITESMRYSLLAGGKRIRPIMCLAACEMAGGTAEDAMAAAVALEMIHTMSLIHDDLPSMDNDSLRRGKPTNHVIYGEDVAILAGDALLSTAFEHVAKHTPAHIPAERVVSVIARLAASVGATGLAGGQVMDLECEGKQGVGLQELTWIHTHKTAALLKVSVAAGAILGGASPEEVEACETYALDIGLAFQVADDILDVTASTEALGKTAGKDLNMDKTTYPKLLGLEGSREEARRLVKEAKAALARFGGRAGPLLAIADYIVEREN 385
            DL  +  +KK AV+ AL LS+   A+ P  +++ E+MRYSLLA  KR+RPI+CLAACE+ GG+    M  AVA+EMIH+MSLIHDDLP+MDND+LRRG PTNHV YGED+AILAGDALLS +FE+VAK+T   +P ER+V V+ARL  SVG  GLAGGQV+DLE EG+  V + +L WIH HKTAALLKV+VA GAILGGAS ++V+  E YA ++GLAFQV DDILDVT STE LGKTAGKD ++ KTTYPKLLGL+GS+ EA+RL+ E    L  +G RA PL+A+A YIVER+N
Sbjct:  142 DLKAFFKDKKAAVDHALSLSVPEFASHPRASRLAEAMRYSLLAPAKRVRPILCLAACELFGGSEASCMPTAVAIEMIHSMSLIHDDLPAMDNDTLRRGLPTNHVKYGEDIAILAGDALLSRSFEYVAKYT-HDVPPERIVQVLARLGESVGVEGLAGGQVLDLELEGQPDVTVDDLRWIHRHKTAALLKVAVACGAILGGASSDDVQRVEQYAENVGLAFQVHDDILDVTQSTEELGKTAGKDADVSKTTYPKLLGLDGSKAEAKRLINEGIQLLVPYGERAIPLIALAKYIVERKN 437          
BLAST of NO04G03790 vs. NCBI_GenBank
Match: WP_030006210.1 (polyprenyl synthetase family protein [Synechococcus sp. NKBG042902])

HSP 1 Score: 357.8 bits (917), Expect = 4.100e-95
Identity = 194/294 (65.99%), Postives = 227/294 (77.21%), Query Frame = 0
Query:   91 LNKYLTEKKGAVELALDLSLQATCPEVAKITESMRYSLLAGGKRIRPIMCLAACEMAGGTAEDAMAAAVALEMIHTMSLIHDDLPSMDNDSLRRGKPTNHVIYGEDVAILAGDALLSTAFEHVAKHTPAHIPAERVVSVIARLAASVGATGLAGGQVMDLECEGKQGVGLQELTWIHTHKTAALLKVSVAAGAILGGASPEEVEACETYALDIGLAFQVADDILDVTASTEALGKTAGKDLNMDKTTYPKLLGLEGSREEARRLVKEAKAALARFGGRAGPLLAIADYIVEREN 385
            L +YL E+K  VE ALD SL  T  E   I E+MRYSLLAGGKR+RPI+CLAACEM GGTA  AM  A ALEMIHTMSLIHDDLP+MDND LRRGKPTNH +YGED+AILAGDALLS AFE+VA+ TP  +PAER++ VI RL  +VGA GL GGQV+DLE EGK  V ++ L +IHTHKT ALL+V V AGAIL GA PEEV+    YA +IGLAFQ+ DDILD+TA+ E LGKTAGKDL   K TYP L G+E S+ EAR+LV EA A+L  +G +A PL A+A+YIV R+N
Sbjct:   13 LAQYLQEQKTIVETALDQSLVIT--EPVTIYEAMRYSLLAGGKRLRPILCLAACEMLGGTAAMAMNTACALEMIHTMSLIHDDLPAMDNDDLRRGKPTNHKVYGEDIAILAGDALLSYAFEYVAR-TP-DVPAERLLQVIVRLGQAVGAEGLVGGQVVDLESEGKTDVSVETLNFIHTHKTGALLEVCVTAGAILAGAKPEEVQLLSRYAQNIGLAFQIVDDILDITATAEELGKTAGKDLEAQKVTYPSLWGIEKSQAEARKLVAEAIASLEPYGEKANPLKALAEYIVNRKN 302          
The following BLAST results are available for this feature:
BLAST of NO04G03790 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM28774.12.100e-15281.04geranylgeranyl pyrophosphate synthase [Nannochloro... [more]
EWM28775.12.400e-14893.90geranylgeranyl pyrophosphate synthase [Nannochloro... [more]
XP_009033669.11.900e-10870.95hypothetical protein AURANDRAFT_52464 [Aureococcus... [more]
XP_002288339.11.900e-10869.02geranylgeranyl pyrophosphate synthetase [Thalassio... [more]
XP_002178555.12.600e-10569.59farnesyltranstransferase [Phaeodactylum tricornutu... [more]
XP_005779411.15.300e-10368.47geranylgeranyl pyrophosphate synthase [Emiliania h... [more]
GAX20190.13.800e-10166.33geranylgeranyl diphosphate synthase, type II [Fist... [more]
GAX25496.12.700e-9965.66geranylgeranyl diphosphate synthase, type II [Fist... [more]
CEM36608.12.800e-9663.64unnamed protein product [Vitrella brassicaformis C... [more]
WP_030006210.14.100e-9565.99polyprenyl synthetase family protein [Synechococcu... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL080nonsL080Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR058ncniR058Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR110ngnoR110Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK009418NSK009418Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO04G03790.1NO04G03790.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|579295gene_2163Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100002g113gene1822Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO04G03790.1NO04G03790.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO04G03790 ID=NO04G03790|Name=NO04G03790|organism=Nannochloropsis oceanica|type=gene|length=1383bp
ATGGTGGGCTTCACGACGTCCACTTGCTTGGTGCTCTCACTCGCCGCCTT
GAGCAGCACTCCCACTGCAGgtaagttagcacgcgtcgagtccgatgggt
ttatctagccacatccccgcctccgtttctttcgtctatctaccctccga
ctccgagagtccgtaagcgcacatacagtcttctctgtcaaatcactatg
cattctctctcttgactttgtctggctcgtcattacaatcactcctaccc
ttttaatttttcactctcatctcgcccaccactcaaccccatacacagCC
TTTCAGCCCCTCTTAAGATCAAGTAACCCCTCCACCTCCTCCTCCCCCGT
CTCTTCCTCCTGCTGTAGCAGCTCCAGGCATCATCCCCGAGGCTGGCTCA
TGGCCGCCGCCGCAACCACTGCCGACGCCCAAAGCACCAGCAGGACTTCC
TCCCCTTCCGCTGCCTCCTCCTCCATCAGCAGTCCACCTACCTTAGACCT
AAATAAATATTTGACGGAGAAGAAGGGAGCGGTGGAACTTGCGCTTGATT
TGTCTTTGCAGGCGACTTGTCCTGAAGTAGCCAAGATAACTGAGTCCATG
CGCTATTCCCTCCTCGCCGGGGGTAAGAGGATACGACCAATCATGTGCCT
TGCTGCCTGCGAAATGGCGGGCGGCACTGCCGAAGACGCCATGGCCGCAG
CGGTGGCATTGGAAATGATCCACACGATGTCATTAATTCATGACGATTTG
CCGAGCATGGATAATGACTCCCTCCGACGGGGCAAGCCAACAAACCATGT
TATATACGGAGAGGACGTGGCAATCCTGGCAGGTGACGCCTTGCTGTCCA
CGGCGTTTGAGCACGTAGCGAAGCACACCCCTGCACACATCCCGGCCGAG
AGGGTGGTGAGCGTCATTGCGCGTCTGGCAGCCTCGGTGGGTGCCACGGG
TCTGGCGGGCGGTCAGGTGATGGACCTGGAATGCGAGGGGAAGCAAGGAG
TGGGCCTGCAAGAGCTCACGTGGATTCACACTCACAAAACGGCGGCGTTG
CTTAAAGTGAGCGTGGCAGCAGGAGCGATTTTGGGGGGGGCGTCGCCTGA
GGAGGTGGAGGCATGTGAGACGTATGCGCTCGACATTGGGTTGGCGTTTC
AGGTGGCTGACGACATTTTGGACGTAACAGCCTCAACTGAGGCGTTGGGG
AAAACTGCGGGGAAGGATTTAAATATGGATAAGACGACTTACCCGAAGTT
GTTGGGCTTGGAGGGGAGTAGGGAGGAGGCCCGGCGACTTGTCAAGGAGG
CAAAGGCGGCTTTGGCGCGATTTGGTGGACGGGCGGGACCTTTGCTGGCC
ATCGCGGATTACATTGTGGAGAGGGAAAATTAA
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protein sequence of NO04G03790.1

>NO04G03790.1-protein ID=NO04G03790.1-protein|Name=NO04G03790.1|organism=Nannochloropsis oceanica|type=polypeptide|length=385bp
MVGFTTSTCLVLSLAALSSTPTAAFQPLLRSSNPSTSSSPVSSSCCSSSR
HHPRGWLMAAAATTADAQSTSRTSSPSAASSSISSPPTLDLNKYLTEKKG
AVELALDLSLQATCPEVAKITESMRYSLLAGGKRIRPIMCLAACEMAGGT
AEDAMAAAVALEMIHTMSLIHDDLPSMDNDSLRRGKPTNHVIYGEDVAIL
AGDALLSTAFEHVAKHTPAHIPAERVVSVIARLAASVGATGLAGGQVMDL
ECEGKQGVGLQELTWIHTHKTAALLKVSVAAGAILGGASPEEVEACETYA
LDIGLAFQVADDILDVTASTEALGKTAGKDLNMDKTTYPKLLGLEGSREE
ARRLVKEAKAALARFGGRAGPLLAIADYIVEREN*
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Synonyms
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