NO04G03760, NO04G03760 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO04G03760 vs. NCBI_GenBank
Match: WP_008323110.1 (endonuclease/exonuclease/phosphatase [Haloferax elongans] >ELZ87700.1 endonuclease/exonuclease/phosphatase family protein [Haloferax elongans ATCC BAA-1513]) HSP 1 Score: 68.2 bits (165), Expect = 8.500e-8 Identity = 63/213 (29.58%), Postives = 86/213 (40.38%), Query Frame = 0 Query: 292 LKGKVKASTVILWRKDRFAVVYEKDAVTRELVPVEMSTTFFQEQRGDWLNLVRPRGYLTARLLFHGMPLYVV-NTHLNLGEQGYRQRQVEELTRHCQVLGEEGSVVVCGDFNVTPDSEEVQLLCRRAGLKDALAEKGCVEPTWSSRNPLTHGVL-RECDHRCDFIFYRGLLGTGGHRMV-NRRCRLALPFWGNTWLSDHFGIVLDLVLEPSMT 502 L G + + +DR A++ + E+ V + T + + RG A + G P + V +THL R Q EL +G VVV GD N TP E L + LK + G PT + LT G L R DH +F RG GT R V + R+ P G W SDH G+V++L P T Sbjct: 147 LPGLIDDEETTVTLRDRDAILVRGGVESTEMPNVTLDATLAVPLGEEGETVEISRGVAAAGVSVSGGPTFAVGSTHLERASSEIRTAQATELAAWAD--QRDGRVVVAGDVNATPGDEAYDTLA--SSLKSVTGDVG---PTCCRSSDLTSGDLSRTVDH----VFVRGFDGTDPTRFVTSDDLRIETP-EGERWPSDHAGVVVNLDAVPIET 347
BLAST of NO04G03760 vs. NCBI_GenBank
Match: CEM02286.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 67.8 bits (164), Expect = 1.100e-7 Identity = 103/428 (24.07%), Postives = 151/428 (35.28%), Query Frame = 0 Query: 133 LKVLNFNVFAGSPVPVLFNSLLPKTESLDGSERLKLQVERIKAMGPDIICLQEACSDGVERHYREALADLYGSFNDTQAP-------EPLGKVLLFFIYLLLSSFLAFCFHCVLDMWDSFSFPSSPLRAKSIQHSDFTHLLLALVLMCKAYIIVSWSMSKCCLIGFLKGKVKASTVILWRKDRFAVVYEKDAVTRELVPVEMSTTFFQEQRGDWLNLV------RPRGYLTARL--LFHGMP-----------------------------LYVVNTHLNLG-EQGYRQRQVEELTRHCQVLGEEGSVVVCGDFNVTPDSEEVQLLCRRAG-----LKDALAEKGCVEPTWSSRNPLTHGVLRECDHRCDFIFYR------------GLLGTGGHRMVNRRCRLALPFWGN--TWLSDHFGIVLDLVL 497 L+VL NVF G + + RL Q++ I+ D+I LQE V++ Y E D Y + Q +P+ ++ +++ +LSS C+ + +FP W+ CL ++L R RFAV E V ++ T +Q + V RPRG++ A L HG+P + + + L +G R QV EL R G V++C D N D E+Q + + G KDAL E G E +WS NPLT G L E D R D+I YR G G H R A + + + +SDH+GIV D + Sbjct: 12 LRVLTLNVFCG--------------KFMMDDSRLSKQIQLIREQNADVISLQECFDVQVQKRYIEGFPD-YTPISAHQLGRHGFSILQPISNLVFKYVWPVLSSVCCVVTCCLPPRVRAIAFP--------------------------------WASCNDCL----------GLLVLVRSSRFAV---------EEVTIQALT--YQTVLYSYFGCVAETCFFRPRGFILATLSQRTHGLPQSLGPLFPASQGPPAPRSSHGEPQHSAMRVKIACSALAIGVAHPNRIYQVRELVRTITGNGCV-PVILCADTNADVDQPEMQEMLQGEGGDGDVWKDALIECGRHECSWSGDNPLTRGWLAEPDQRNDYIVYRQAVPWAESPSPSGKSSRGLHASSVLRLLSASVIFKDRQSIVSDHYGIVADFAI 370
BLAST of NO04G03760 vs. NCBI_GenBank
Match: WP_100322733.1 (endonuclease [Xanthomonadaceae bacterium NML91-0213] >PJJ99016.1 endonuclease [Xanthomonadaceae bacterium NML91-0213]) HSP 1 Score: 67.0 bits (162), Expect = 1.900e-7 Identity = 52/147 (35.37%), Postives = 70/147 (47.62%), Query Frame = 0 Query: 352 RLLFHGMPLYVVNTHLNLGEQG--YRQRQVEELTRHCQVLGEEGSVVVCGDFNVTPDSEEVQLLCRRAGLKDALAEKGCVEPTWSSRNPLTHGVLRECDHRCDFIFYRGLLGTGGHRMVNRRCRLALPFWGNTWLSDHFGIVLDLVL 497 R+ G + V NTHL+ + G R RQ+ ++ H + G SV+V GD N D+ E+ L AG DA A T S+ NP G R DH +F R GTG + RR L P TW SDHFG+++D + Sbjct: 138 RVAVGGQAVDVFNTHLHWTDDGGAIRARQLGDVLAHVERNGPSASVLV-GDLNAEADAPELHALA-TAGFVDAPAMVDPAMTTLSTLNPHYFGHGRRIDH----VFAR---GTGLRPLAARRV-LDEPGADGTWPSDHFGVLVDFAI 274
BLAST of NO04G03760 vs. NCBI_GenBank
Match: OBJ85082.1 (hypothetical protein A9W97_19990 [Mycobacterium gordonae]) HSP 1 Score: 66.6 bits (161), Expect = 2.500e-7 Identity = 50/156 (32.05%), Postives = 73/156 (46.79%), Query Frame = 0 Query: 343 VRPRGYLTARLLFHGMPLYVVNTHLNLG-EQGY-RQRQVEELTRHCQVLGEEGSVVVCGDFNVTPDSEEVQLLCRRAGLKDAL--AEKGCVEPTWSSRNPLTHGVLRECDHRCDFIFYRGLLGTGGHRMVNRRCRLALPFWGNTWLSDHFGIVLDL 495 + PRG LT + + V +THL+ + G+ R+ QV +L + +VCGDFN P+S EV+ + L DA A G + TW++ NP T D R D+IF G ++++ P G W SDHFG+V L Sbjct: 98 IEPRGALTVEVRVRKRLVSVTSTHLSYQFDAGWVREAQVRQLADFVGTGSGDFPPIVCGDFNARPESNEVRHI--SGLLFDAFQEAHPGELGFTWNNTNPYTSQDPTP-DQRIDYIFVGPRTDDGAGKVLDAAVVCDAPRQG-VWPSDHFGVVAQL 249
BLAST of NO04G03760 vs. NCBI_GenBank
Match: OBK61811.1 (hypothetical protein A5656_01620 [Mycobacterium gordonae]) HSP 1 Score: 66.6 bits (161), Expect = 2.500e-7 Identity = 51/156 (32.69%), Postives = 73/156 (46.79%), Query Frame = 0 Query: 343 VRPRGYLTARLLFHGMPLYVVNTHLNLG-EQGY-RQRQVEELTRHCQVLGEEGSVVVCGDFNVTPDSEEVQLLCRRAGLKDAL--AEKGCVEPTWSSRNPLTHGVLRECDHRCDFIFYRGLLGTGGHRMVNRRCRLALPFWGNTWLSDHFGIVLDL 495 + PRG LT + + V +THL+ + G+ R+ QV +L + +VCGDFN P+S EV+ + L DA A G + TW++ NP T D R D+IF G R+++ P G W SDHFG+V L Sbjct: 98 IEPRGALTVDVRVQKRLVSVTSTHLSYQFDAGWVREAQVRQLADFVGTGSGDFPPIVCGDFNARPESTEVRHI--SGLLFDAFQEAHPGELGFTWNNTNPYT-AQDPTPDQRIDYIFVGPRTADGAGRVLDAAVVCNAPRCG-VWPSDHFGVVTQL 249
BLAST of NO04G03760 vs. NCBI_GenBank
Match: ODR17251.1 (hypothetical protein BHQ23_27015 [Mycobacterium gordonae]) HSP 1 Score: 66.6 bits (161), Expect = 2.500e-7 Identity = 50/163 (30.67%), Postives = 71/163 (43.56%), Query Frame = 0 Query: 343 VRPRGYLTARLLFHGMPLYVVNTHLN--LGEQGYRQRQVEELTRHCQVLGEEGSVVVCGDFNVTPDSEEVQLLCRRAGLK-------DA--LAEKGCVEPTWSSRNPLTHGVLRECDHRCDFIFYRGLLGTGGHRMVNRRCRLALPFWGNTWLSDHFGIVLDL 495 + PRG LT + + V +THL+ E R+ QV +L + +VCGDFN P+S EV + GL DA +A G + TW++ NP T D R D+IF G ++++ P G W SDHF +V L Sbjct: 97 IEPRGALTVDVRVRNRLVSVTSTHLSYRFDEGWVREAQVRQLADFVGTRSGDFPPIVCGDFNACPESTEVLFMGGMHGLDGQSLHLFDAFEVAHPGELGFTWNNTNPYT-AQDPTPDQRIDYIFVGAHTADGAGKVLDAAVVCDAPRRG-VWPSDHFAVVAQL 257
BLAST of NO04G03760 vs. NCBI_GenBank
Match: WP_082977923.1 (hypothetical protein [Mycobacterium gordonae]) HSP 1 Score: 66.6 bits (161), Expect = 2.500e-7 Identity = 50/156 (32.05%), Postives = 73/156 (46.79%), Query Frame = 0 Query: 343 VRPRGYLTARLLFHGMPLYVVNTHLNLG-EQGY-RQRQVEELTRHCQVLGEEGSVVVCGDFNVTPDSEEVQLLCRRAGLKDAL--AEKGCVEPTWSSRNPLTHGVLRECDHRCDFIFYRGLLGTGGHRMVNRRCRLALPFWGNTWLSDHFGIVLDL 495 + PRG LT + + V +THL+ + G+ R+ QV +L + +VCGDFN P+S EV+ + L DA A G + TW++ NP T D R D+IF G ++++ P G W SDHFG+V L Sbjct: 131 IEPRGALTVEVRVRKRLVSVTSTHLSYQFDAGWVREAQVRQLADFVGTGSGDFPPIVCGDFNARPESNEVRHI--SGLLFDAFQEAHPGELGFTWNNTNPYTSQDPTP-DQRIDYIFVGPRTDDGAGKVLDAAVVCDAPRQG-VWPSDHFGVVAQL 282
BLAST of NO04G03760 vs. NCBI_GenBank
Match: WP_082993986.1 (hypothetical protein [Mycobacterium gordonae]) HSP 1 Score: 66.6 bits (161), Expect = 2.500e-7 Identity = 51/156 (32.69%), Postives = 73/156 (46.79%), Query Frame = 0 Query: 343 VRPRGYLTARLLFHGMPLYVVNTHLNLG-EQGY-RQRQVEELTRHCQVLGEEGSVVVCGDFNVTPDSEEVQLLCRRAGLKDAL--AEKGCVEPTWSSRNPLTHGVLRECDHRCDFIFYRGLLGTGGHRMVNRRCRLALPFWGNTWLSDHFGIVLDL 495 + PRG LT + + V +THL+ + G+ R+ QV +L + +VCGDFN P+S EV+ + L DA A G + TW++ NP T D R D+IF G R+++ P G W SDHFG+V L Sbjct: 106 IEPRGALTVDVRVQKRLVSVTSTHLSYQFDAGWVREAQVRQLADFVGTGSGDFPPIVCGDFNARPESTEVRHI--SGLLFDAFQEAHPGELGFTWNNTNPYT-AQDPTPDQRIDYIFVGPRTADGAGRVLDAAVVCNAPRCG-VWPSDHFGVVTQL 257
BLAST of NO04G03760 vs. NCBI_GenBank
Match: WP_083271378.1 (hypothetical protein [Mycobacterium gordonae] >ORV82844.1 hypothetical protein AWC08_28110 [Mycobacterium gordonae]) HSP 1 Score: 66.6 bits (161), Expect = 2.500e-7 Identity = 50/163 (30.67%), Postives = 71/163 (43.56%), Query Frame = 0 Query: 343 VRPRGYLTARLLFHGMPLYVVNTHLN--LGEQGYRQRQVEELTRHCQVLGEEGSVVVCGDFNVTPDSEEVQLLCRRAGLK-------DA--LAEKGCVEPTWSSRNPLTHGVLRECDHRCDFIFYRGLLGTGGHRMVNRRCRLALPFWGNTWLSDHFGIVLDL 495 + PRG LT + + V +THL+ E R+ QV +L + +VCGDFN P+S EV + GL DA +A G + TW++ NP T D R D+IF G ++++ P G W SDHF +V L Sbjct: 106 IEPRGALTVDVRVRNRLVSVTSTHLSYRFDEGWVREAQVRQLADFVGTRSGDFPPIVCGDFNACPESTEVLFMGGMHGLDGQSLHLFDAFEVAHPGELGFTWNNTNPYT-AQDPTPDQRIDYIFVGAHTADGAGKVLDAAVVCDAPRRG-VWPSDHFAVVAQL 266
BLAST of NO04G03760 vs. NCBI_GenBank
Match: PJE24548.1 (endonuclease [Mycobacterium sp.]) HSP 1 Score: 66.2 bits (160), Expect = 3.200e-7 Identity = 50/156 (32.05%), Postives = 73/156 (46.79%), Query Frame = 0 Query: 343 VRPRGYLTARLLFHGMPLYVVNTHLNLG-EQGY-RQRQVEELTRHCQVLGEEGSVVVCGDFNVTPDSEEVQLLCRRAGLKDAL--AEKGCVEPTWSSRNPLTHGVLRECDHRCDFIFYRGLLGTGGHRMVNRRCRLALPFWGNTWLSDHFGIVLDL 495 + PRG LT + + V +THL+ + G+ R+ QV +L + +VCGDFN P+S EV+ + L DA A G + TW++ NP T D R D+IF G ++++ P G W SDHFG+V L Sbjct: 54 IEPRGALTVDVRVRKRLVSVTSTHLSYQFDAGWVREAQVRQLADFVGTGSGDFPPIVCGDFNARPESTEVRHI--SGLLFDAFQEAHPGELGFTWNNTNPYT-AQDPTPDQRIDYIFVGARTADGAGKVLDAAVVCNAPRCG-VWPSDHFGVVAQL 205 The following BLAST results are available for this feature:
BLAST of NO04G03760 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO04G03760 ID=NO04G03760|Name=NO04G03760|organism=Nannochloropsis oceanica|type=gene|length=1670bpback to top protein sequence of NO04G03760.1 >NO04G03760.1-protein ID=NO04G03760.1-protein|Name=NO04G03760.1|organism=Nannochloropsis oceanica|type=polypeptide|length=502bpback to top Synonyms
Publications
|