NO04G03760, NO04G03760 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO04G03760 vs. NCBI_GenBank
Match: EWM28686.1 (Endonuclease/exonuclease/phosphatase [Nannochloropsis gaditana]) HSP 1 Score: 552.7 bits (1423), Expect = 1.100e-153 Identity = 268/391 (68.54%), Postives = 312/391 (79.80%), Query Frame = 0 Query: 128 KYKYHLKVLNFNVFAGSPVPVLFNSLLPKTESLDGSERLKLQVERIKAMGPDIICLQEACSDGVERHYREALADLYGSFNDTQAPEPLGKVLLFFIYLLLSSFLAFCFHCVLDMWDS---------------FSFPS-----SPLRAKSIQHSDFTHLLLALVLMCKAYIIVSWSMSKCCLIGFLKGKVKASTVILWRKDRFAVVYEKDAVTRELVPVEMSTTFFQEQRGDWLNLVRPRGYLTARLLFHGMPLYVVNTHLNLGEQGYRQRQVEELTRHCQVLGEEGSVVVCGDFNVTPDSEEVQLLCRRAGLKDALAEKGCVEPTWSSRNPLTHGVLRECDHRCDFIFYRGLLGTGGHRMVNRRCRLALPFWGNTWLSDHFGIVLDLVLEP 499 K+K+ LKVLNFNVFAGSP+P+ F S+ PKT SL+GSERLKLQVERI+A+GPDIICLQEACSDGVER+YREA ADLY SF + PE LGK+ L F+YL++++ LAFCFHCVLD+W S F+ PS P D T LLL L L+ K + WSM K CL+GFL+G+VKASTVILWR+DRF+VVY KD VT+ LVP EM TTFFQEQRGDWLNLVRPRGYLTA+LLFHGMPLY+VNTHLNLG+Q +R+RQVEELT+HC+ L + GSVV+CGDFNVTP+SEE+QLL ++AG+KDAL EKGC EPTWSSRNPLTHGVL E DHRCDFIFY+GL HRMVNRRCRL +PFWGNTWLSDHFGIVLD++LEP Sbjct: 132 KHKFRLKVLNFNVFAGSPIPMCFQSVTPKTASLEGSERLKLQVERIRALGPDIICLQEACSDGVERYYREAFADLYDSFFEEHPPETLGKLTLGFVYLVMATVLAFCFHCVLDLWASSLTLIIPFGPSVSSTFALPSLFSSFKPHHWSRDDPYDSTRLLLVLALVGKGLGVAVWSMRKTCLVGFLQGQVKASTVILWRRDRFSVVYNKDPVTQALVPAEMRTTFFQEQRGDWLNLVRPRGYLTAQLLFHGMPLYIVNTHLNLGQQVFRRRQVEELTQHCKSLSQVGSVVLCGDFNVTPESEEIQLLSKQAGVKDALLEKGCSEPTWSSRNPLTHGVLLEEDHRCDFIFYKGL--ARQHRMVNRRCRLDVPFWGNTWLSDHFGIVLDMILEP 520
BLAST of NO04G03760 vs. NCBI_GenBank
Match: XP_005786029.1 (hypothetical protein EMIHUDRAFT_467770 [Emiliania huxleyi CCMP1516] >EOD33600.1 hypothetical protein EMIHUDRAFT_467770 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 115.9 bits (289), Expect = 3.500e-22 Identity = 119/414 (28.74%), Postives = 160/414 (38.65%), Query Frame = 0 Query: 133 LKVLNFNVFAGSPVPVLFNSLLPKTESLDGSERLKLQVERIKAMGPDIICLQEACSDGVERHYREALADLYGSFNDTQAPEPLGKVLLFFIYLLLSSFLAFCFHCVLDMWDSFSFPSSPLRAKSIQHSDFTHLLLALVLMCKAYIIVSWSMSKCCLIGFLKGKVKASTVILWRKDRFAVVYEKDAVTRELVPVEMSTTF-FQEQRGDWLNLVRPRGYLTA--RLLFHGMPLYVVNTHLNL--GEQ--------------------GYRQRQVEELTRHCQVLGEE--GSVVVCGDFNVTPDSEEVQLLCRRAGLKDALAEKGCVEPTW---------------SSRNPLT-HGVLRECD---HRCDFIFYRGLLGTGGHRMVNRRCRLAL--PFWGNTWLSDHFGIVLDLVLEP 499 L VL +NVF G P P P +LDGS RL Q+ +++ + PD+ICLQE SDGV Y AL+D+Y + A E F C RA + H+ + + GFL G V++ VIL ++ E+D ++T F F++Q GD LN RPRG L RL G L VVNTH N G+Q +R+ Q+++L L E ++CGD N +P+ E L R G DA G +W +RNPL G L D R D+IF R+ RLAL P G+ WLSDHFG++ P Sbjct: 16 LSVLTYNVFCGPPTPT------PLAGTLDGSARLAGQISKLRELAPDVICLQEVVSDGVRERYAHALSDMYDASFVLTADE---------------------FRC---------------RAGRMMRLALDHV-----------------GPQTTIGGFLLGSVQSGLVILHKR----ATLERDG---------LATAFPFEDQAGDLLNRFRPRGALAVPLRLRGDGSRLLVVNTHANAESGDQLFDLSRLLSGAGISSIPSTSVHRKTQLQQLFLEASRLAEARGARALLCGDLNSSPELGEWAPLASRFGFVDAWRPSGGPGHSWDGARAYCRDAAECGRGTRNPLVREGWLSPGDGAATRLDYIFC-----GEASRLTPLESRLALDEPEQGH-WLSDHFGVMTTFEAAP 351
BLAST of NO04G03760 vs. NCBI_GenBank
Match: XP_005786027.1 (hypothetical protein EMIHUDRAFT_111736 [Emiliania huxleyi CCMP1516] >EOD33598.1 hypothetical protein EMIHUDRAFT_111736 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 95.9 bits (237), Expect = 3.800e-16 Identity = 102/393 (25.95%), Postives = 148/393 (37.66%), Query Frame = 0 Query: 133 LKVLNFNVFAGSPVPVLFNSLLPKTESLDGSERLKLQVERIKAMGPDIICLQEACSDGVERHYREALADLYGSFNDTQAPEPLGKVLLFFIYLLLSSFLAFCFHCVLDMWDSFSFPSSPLRAKSIQHSDFTHLLLALVLMCKAYIIVSWSMSKCCLIGFLKGKVKASTVILWRKDRFAVVYEKDAVTRELVPVEMSTTF-FQEQRGDWLNLVRPRGYLTA--RLLFHGMPLYVVNTHLNL--GEQ--------------------GYRQRQVEEL-TRHCQVLGEEGS-VVVCGDFNVTPDSEEVQLLCRRAGLKDALAEKGCVEPTWSSRNPLTHGVLRECDHRCDFIFYRGLLGTGGHRMVNRRCRLALPFWGNTWLSDHFGIVLDLVLEP 499 L VL +NVF G P P P +LDGS RL Q+ +++ + PD+ICLQE SDGV Y AL+D+Y + A E F C RA + H+ + + GFL G V++ +IL ++ E+D ++T F F++Q GD LN RPRG L RL G L VVNTH N G+Q +R+ Q+++L ++ G G+ ++CGD N +P+ G ++ L +G + P + R D+IF G G WLSDHFG++ P Sbjct: 16 LSVLTYNVFCGPPTPT------PLAGTLDGSARLAGQISKLRELAPDVICLQEVVSDGVRERYAHALSDMYDASFVLTADE---------------------FRC---------------RAGRMMRLALDHV-----------------GPQTTIGGFLLGSVQSGLMILHKR----ATLERDG---------LATAFPFEDQAGDLLNRFRPRGALAVPLRLRGDGSRLLVVNTHANAESGDQLFDLSRLLSGAGISSIPCTSVHRKTQLQQLFLEASRLAGARGARALLCGDLNSSPE----------LGTRNPLVREGWLSPGDGAAT------------RLDYIF----CGEG------------------HWLSDHFGVMTTFEAAP 292
BLAST of NO04G03760 vs. NCBI_GenBank
Match: KOO28418.1 (endonuclease exonuclease phosphatase [Chrysochromulina sp. CCMP291]) HSP 1 Score: 95.9 bits (237), Expect = 3.800e-16 Identity = 78/238 (32.77%), Postives = 103/238 (43.28%), Query Frame = 0 Query: 133 LKVLNFNVFAGSPVPVLFNSLLPKTESLDGSERLKLQVERIKAMGPDIICLQEACSDGVERHYREALADLYGSFNDTQAPEPLGKVLLFFIYLLLSSFLAFCFHCVLDMWDSFSFPSSPLRAKSIQHSDFTHLLLALVLMCKAYIIVSWSMSKCCLIGFLKGKVKASTVILWRKDRFAVVYEKDAVTRELVPVEMSTTFFQEQRGDWLNLVRPRGYLTA--RLLFHGMPLYVVNTHLN 369 L VL FNVFAG P P P LDGS+RL+ QV +I+A+ PDIICLQE +DGV +Y L D Y +SF+ D F + L K++ H + L GFL G V++ ++L R++ V E+ + +S+ F+EQ GD LN VRPRG L RL G PL V+NTH N Sbjct: 7 LSVLTFNVFAGPPTPT------PFAAQLDGSDRLRHQVAQIRALKPDIICLQEVQTDGVREYYTAKLQDTYE-----------------------ASFVLTA--------DEFRCKAGRLMRKALDHIG----------------------PQTTLSGFLLGPVQSGLMVLHRRE----VLERAST--------VSSFTFREQSGDPLNFVRPRGALCVPLRLRSDGSPLCVINTHAN 173
BLAST of NO04G03760 vs. NCBI_GenBank
Match: KOO21389.1 (endonuclease exonuclease phosphatase [Chrysochromulina sp. CCMP291]) HSP 1 Score: 92.8 bits (229), Expect = 3.200e-15 Identity = 86/301 (28.57%), Postives = 120/301 (39.87%), Query Frame = 0 Query: 133 LKVLNFNVFAGSPVPVLFNSLLPKTESLDGSERLKLQVERIKAMGPDIICLQEACSDGVERHYREALADLYGSFNDTQAPEPLGKVLLFFIYLLLSSFLAFCFHCVLDMWDSFSFPSSPLRAKSIQHSDFTHLLLALVLMCKAYIIVSWSMSKCCLIGFLKGKVKASTVILWRKDRFAVVYEKDAVTRELVPVEMSTTFFQEQRGDWLNLVRPRGYLTA--RLLFHGMPLYVVNTHLN------LGEQGY---------------RQRQVEELTRHCQVLGEEGSVVVCGDFNVTPDSEEV 411 L+VL FN FAG P P + L+GS+RL LQV++I+ + PD++CLQE SDGV +H+ + PE +L + LR + + LM KA + + + + + GFL G V+A +IL R+D A+T F +Q GD LN RPRG L A RL + V NTH N LG + R+ Q+ +L H L VVVCGD N P+ E+ Sbjct: 16 LRVLTFNAFAGPPTPTKVD------RGLEGSKRLSLQVDKIRELAPDVVCLQEVQSDGVRKHF------------EANMPEYAATYVL----------------------------NDELRCRIGK------------LMRKA-LDSAGAGPQTTISGFLLGPVQAGLMILHRRDTLVADGPASAIT------------FDDQSGDLLNAFRPRGVLCAHLRLRADNSRIVVANTHANSESASQLGGMIFGAYSTLPSVPLSSTPRRNQLNQLFVHASRLSLHSRVVVCGDLNSAPELGEI 245
BLAST of NO04G03760 vs. NCBI_GenBank
Match: WP_082672493.1 (hypothetical protein [Luteimonas abyssi]) HSP 1 Score: 75.1 bits (183), Expect = 6.900e-10 Identity = 51/149 (34.23%), Postives = 70/149 (46.98%), Query Frame = 0 Query: 352 RLLFHGMPLYVVNTHLNLGEQG--YRQRQVEELTRHCQVLGEEGSVVVCGDFNVTPDSEEVQLLCRRAGLKDALAEKGCVEPTWSSRNPLTHGVLRECDHRCDFIFYRGLLGTGGHRMVNRRCRLALPFWGNTWLSDHFGIVLDLVLEP 499 R+ G L V THL+ + G R RQ+++L H +G +V GDFN D+ E+ L AG DALA + ++ NP E R D +F RGL R+++R P TW SDHFG+ D+ LEP Sbjct: 164 RIDVEGRLLDVFVTHLHASDDGGAIRARQLQDLLAHVDAHAGDGPALVLGDFNAEADTPELGALA-GAGFVDALATANPAAASQTTLNPHYF----ERGRRIDHVFARGLRVLDAQRVLDR------PDADGTWPSDHFGVHADVALEP 301
BLAST of NO04G03760 vs. NCBI_GenBank
Match: WP_074791313.1 (endonuclease/exonuclease/phosphatase [Haloferax larsenii] >SEK32796.1 PGF-CTERM protein [Haloferax larsenii]) HSP 1 Score: 70.9 bits (172), Expect = 1.300e-8 Identity = 67/215 (31.16%), Postives = 92/215 (42.79%), Query Frame = 0 Query: 292 LKGKVKASTVILWRKDRFAVVYEKDAVTREL--VPVEMSTTFFQEQRGDWLNLVRPRGYLTARLLFHGMPLYVV-NTHLNLGEQGYRQRQVEELTRHCQVLGEEGSVVVCGDFNVTPDSEEVQLLCRRAGLKDALAEKGCVEPTWSSRNPLTHGVL-RECDHRCDFIFYRGLLGTGGHRMV-NRRCRLALPFWGNTWLSDHFGIVLDLVLEPSMT 502 L G V + +DR A++ + + E+ V ++ S + G+ + + RG A + G P + V +THL R Q EL +G VVV GD N TPD E L A L+ G V PT + LT G L R DH +F RG GT R V + R+ P G W SDH G+V++L P T Sbjct: 147 LPGLVDGDETTVTLRDRDAILVREGVESTEIPNVTLDASLAVPLGEGGETVEI--SRGVAAAGVSVSGGPTFAVGSTHLERASSEIRTAQATELAAWAD--KRDGRVVVAGDVNATPDDEAYDTLA--ASLEPV---SGDVGPTCCRSSDLTSGDLSRTVDH----VFVRGFDGTDSTRFVTDDDLRIETP-EGERWPSDHAGVVVNLDAVPLET 347
BLAST of NO04G03760 vs. NCBI_GenBank
Match: KQH78886.1 (hypothetical protein AO501_16695 [Mycobacterium gordonae]) HSP 1 Score: 69.7 bits (169), Expect = 2.900e-8 Identity = 50/153 (32.68%), Postives = 71/153 (46.41%), Query Frame = 0 Query: 343 VRPRGYLTARLLFHGMPLYVVNTHLN--LGEQGYRQRQVEELTRHCQVLGEEGSVVVCGDFNVTPDSEEVQLLCRRAGLKDALAEKGCVEPTWSSRNPLTHGVLRE--CDHRCDFIFYRGLLGTGGHRMVNRRCRLALPFWGNTWLSDHFGIV 492 + PRG LT L + V +THL+ E R+ QV +LT + +VCGDFN P+S EV+L+ +A G + TW++ NP T R+ D R D+IF G +++ P G W SDHFG+V Sbjct: 106 IEPRGALTVDLRVRNRLVSVTSTHLSYRFDEGRVREAQVHQLTDFVGTGSGDFPPIVCGDFNARPESTEVRLVGGLLFDAFEVARPGELGFTWNNINPYT---ARDPTPDQRIDYIFVGPRTADGAGKVLAAAVVCDAPRRG-AWPSDHFGVV 254
BLAST of NO04G03760 vs. NCBI_GenBank
Match: WP_082658612.1 (hypothetical protein [Mycobacterium gordonae]) HSP 1 Score: 69.7 bits (169), Expect = 2.900e-8 Identity = 50/153 (32.68%), Postives = 71/153 (46.41%), Query Frame = 0 Query: 343 VRPRGYLTARLLFHGMPLYVVNTHLN--LGEQGYRQRQVEELTRHCQVLGEEGSVVVCGDFNVTPDSEEVQLLCRRAGLKDALAEKGCVEPTWSSRNPLTHGVLRE--CDHRCDFIFYRGLLGTGGHRMVNRRCRLALPFWGNTWLSDHFGIV 492 + PRG LT L + V +THL+ E R+ QV +LT + +VCGDFN P+S EV+L+ +A G + TW++ NP T R+ D R D+IF G +++ P G W SDHFG+V Sbjct: 109 IEPRGALTVDLRVRNRLVSVTSTHLSYRFDEGRVREAQVHQLTDFVGTGSGDFPPIVCGDFNARPESTEVRLVGGLLFDAFEVARPGELGFTWNNINPYT---ARDPTPDQRIDYIFVGPRTADGAGKVLAAAVVCDAPRRG-AWPSDHFGVV 257
BLAST of NO04G03760 vs. NCBI_GenBank
Match: PJE00327.1 (hypothetical protein CK428_32635 [Mycobacterium sp.]) HSP 1 Score: 68.9 bits (167), Expect = 5.000e-8 Identity = 51/163 (31.29%), Postives = 72/163 (44.17%), Query Frame = 0 Query: 343 VRPRGYLTARLLFHGMPLYVVNTHLN--LGEQGYRQRQVEELTRHCQVLGEEGSVVVCGDFNVTPDSEEVQLLCRRAGLK-------DA--LAEKGCVEPTWSSRNPLTHGVLRECDHRCDFIFYRGLLGTGGHRMVNRRCRLALPFWGNTWLSDHFGIVLDL 495 + PRG LT + + V +THL+ E R+ QV +L + +VCGDFN P+S EV + GL DA +A G + TW++ NP T D R D+IF GG ++++ P G W SDHF +V L Sbjct: 106 IEPRGALTVDVRVRNRLVSVTSTHLSYRFDEGWVREAQVRQLADFVGTRSGDFPPIVCGDFNACPESTEVLFMGGMHGLDGQSLHLFDAFEVAHPGELGFTWNNTNPYT-AQDPTPDQRIDYIFVGAHTADGGGKVLDAAVVCDAPRRG-VWPSDHFAVVAQL 266 The following BLAST results are available for this feature:
BLAST of NO04G03760 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO04G03760 ID=NO04G03760|Name=NO04G03760|organism=Nannochloropsis oceanica|type=gene|length=1670bpback to top protein sequence of NO04G03760.1 >NO04G03760.1-protein ID=NO04G03760.1-protein|Name=NO04G03760.1|organism=Nannochloropsis oceanica|type=polypeptide|length=502bpback to top Synonyms
Publications
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