NO04G03710, NO04G03710 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO04G03710 vs. NCBI_GenBank
Match: EWM28768.1 (zinc iron permease [Nannochloropsis gaditana]) HSP 1 Score: 390.2 bits (1001), Expect = 9.100e-105 Identity = 265/478 (55.44%), Postives = 297/478 (62.13%), Query Frame = 0 Query: 1 MPWTLFVYTLAIWLVGLGGVLAPLCMASYNKVVLTLCNSLAAGVMLSAGFVHLLHDAVSSLAGLQTKMNGYPVSEFVCALSFICVFYIETLVSPPVKPGEHHHLDHIQVDKGTECFPSQWEWQAGQSPNRTTWTRPKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGPATRLLEDTGNXXXXXXXXXAVQGHTGLLAHMQLT-------HSHQVDLEGSLTARGDHQDQEVCTRAASSTKAGHPSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHKDLHTFAGALCLLAALGFHSVIEGLGLATATTQN----DATQVGVFIAILAHKGLAGLTLGTTMLLAEASQTEFLGTALLFSVATPLGVGLGALISSYCKSAEALGLMAAIAAGTFIHVAAIEIIPSAFRDTSATHLAKLASLTVGFLAMSALFLV 468 M W L +YTLAIWLVGLGGVLAP+ MASYNK+VL +CNS AAGVMLSAGFVHLLHDAVSSL+GLQ K+ G+P+SEFVCALSFI VFYIETL +PPVK GEHHHLDHIQVDKGTECFPSQWEWQAG SP+ + + AG +D+ + TGLLAH++ T S + EG + + + ST+ HP XXXXXXXXXXXXXXXXXXXX AGALCLLAALGFHSV+EGLGLATAT+Q+ TQVGVF+AILAHKGLAGLTLG+TMLLAE SQTEFL TA+LFS ATP GV LG LISSYC +A +GLM A+AAGTFIHVAAIEIIPSAFRD+SAT L KL SLTVGFLAMSALFLV Sbjct: 1 MSWVLLIYTLAIWLVGLGGVLAPIVMASYNKMVLAVCNSFAAGVMLSAGFVHLLHDAVSSLSGLQEKLYGFPISEFVCALSFIMVFYIETLFAPPVKSGEHHHLDHIQVDKGTECFPSQWEWQAGDSPSGLFRSISQTKIRKSERQDLLPPLHQYGAVMPRLAPSSSETEPACEKDTAGVIVENHMNENESKNATEDAGRQLPGKKDSCSQAGKAAHQENDGMRTGLLAHLRQTQAPILPSQSSEGHDEGKAQSLESTHGRVSPGSKSPSTRRSHPG---------------MSAPSHCHXXXXXXXXXXXXXXXXXXXXXXXXXXXVAGALCLLAALGFHSVMEGLGLATATSQSIVDGGGTQVGVFLAILAHKGLAGLTLGSTMLLAEVSQTEFLLTAVLFSAATPAGVALGVLISSYCHTAATVGLMGAVAAGTFIHVAAIEIIPSAFRDSSATQLTKLMSLTVGFLAMSALFLV 463
BLAST of NO04G03710 vs. NCBI_GenBank
Match: XP_005843138.1 (hypothetical protein CHLNCDRAFT_141521 [Chlorella variabilis] >EFN51036.1 hypothetical protein CHLNCDRAFT_141521 [Chlorella variabilis]) HSP 1 Score: 88.6 bits (218), Expect = 5.700e-14 Identity = 59/145 (40.69%), Postives = 93/145 (64.14%), Query Frame = 0 Query: 320 TFAGALCLLAALGFHSVIEGLGLATATTQNDATQVGVFIAILAHKGLAGLTLGTTMLLAEASQTEFLGTALLFSVATPLGVGLGALISSYCKSAEALGLMAAIAAGTFIHVAAIEIIPSAFRDTSATHLAKLASLTVGFLAMSAL 465 +F A+ + AL FHS++EG + TT +++ + +FIAI++HKGLA LG++++ ++AS F L F+ A+P+G+ +G +IS K A + +A+A+GTF++VA +E+IP RD S L KLA+L VGF MS L Sbjct: 248 SFLTAMLMGVALCFHSLLEGAAMGAQTTISNS--LHIFIAIVSHKGLAAYALGSSIVDSDASMQRFWSVVLPFTFASPVGIFIGYVISDVAKGVGAASI-SALASGTFLYVAFMEVIPKELRDGSRMAL-KLAALLVGFGLMSLL 388
BLAST of NO04G03710 vs. NCBI_GenBank
Match: CEL93966.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 84.7 bits (208), Expect = 8.200e-13 Identity = 62/155 (40.00%), Postives = 87/155 (56.13%), Query Frame = 0 Query: 316 KDLHTFAGALCLLAALGFHSVIEGLGLATATTQNDATQVGVFIAILAHKGLAGLTLGTTMLLAEASQTEFLGTALLFSVATPLGVGLGALI----SSYCKSAEALGLMAAIAAGTFIHVAAIEIIPSAFRD--TSATHLAKLASLTVGFLAMSAL 465 KD+ F AL L A+ HS IEG+GL +AT + V IAI+AHK LAG LGT+++ + +FL + L FS+ TPLG LG I A A G+++A+AAGTF +VA EIIP R+ L K+ ++ +G M+A+ Sbjct: 218 KDIAWFP-ALVLFVAISVHSFIEGMGLGSAT----VSVASVGIAIIAHKSLAGFALGTSLVASGLPIRQFLASVLTFSLMTPLGAALGLTILYVNQGTATGATACGVLSALAAGTFFYVALYEIIPKCLREGVQGLACLYKIVAVWIGAAVMTAV 367
BLAST of NO04G03710 vs. NCBI_GenBank
Match: PRW20416.1 (serine threonine phosphatase 2A regulatory subunit B beta-like isoform A [Chlorella sorokiniana]) HSP 1 Score: 84.7 bits (208), Expect = 8.200e-13 Identity = 57/145 (39.31%), Postives = 89/145 (61.38%), Query Frame = 0 Query: 320 TFAGALCLLAALGFHSVIEGLGLATATTQNDATQVGVFIAILAHKGLAGLTLGTTMLLAEASQTEFLGTALLFSVATPLGVGLGALISSYCKSAEALGLMAAIAAGTFIHVAAIEIIPSAFRDTSATHLAKLASLTVGFLAMSAL 465 +F A+ + AL FHS++EG + T +++ V +FIAI++HKGLA LG++++ +EAS F L F+ A+P+G+ +G + S K A ++A+A+GTF++VA +E+IP RD S L KL +L GF MS L Sbjct: 155 SFLTAMLMGVALCFHSLLEGAAMGAQPTISNS--VHIFIAIVSHKGLAAYALGSSIVDSEASMRRFWSVVLPFTFASPIGIFIGYIASDVAKGVGA-ACISALASGTFLYVAYMEVIPKELRDPSHMVL-KLTALLTGFCLMSLL 295
BLAST of NO04G03710 vs. NCBI_GenBank
Match: PRW20415.1 (serine threonine phosphatase 2A regulatory subunit B beta-like isoform B [Chlorella sorokiniana]) HSP 1 Score: 84.7 bits (208), Expect = 8.200e-13 Identity = 57/145 (39.31%), Postives = 89/145 (61.38%), Query Frame = 0 Query: 320 TFAGALCLLAALGFHSVIEGLGLATATTQNDATQVGVFIAILAHKGLAGLTLGTTMLLAEASQTEFLGTALLFSVATPLGVGLGALISSYCKSAEALGLMAAIAAGTFIHVAAIEIIPSAFRDTSATHLAKLASLTVGFLAMSAL 465 +F A+ + AL FHS++EG + T +++ V +FIAI++HKGLA LG++++ +EAS F L F+ A+P+G+ +G + S K A ++A+A+GTF++VA +E+IP RD S L KL +L GF MS L Sbjct: 154 SFLTAMLMGVALCFHSLLEGAAMGAQPTISNS--VHIFIAIVSHKGLAAYALGSSIVDSEASMRRFWSVVLPFTFASPIGIFIGYIASDVAKGVGA-ACISALASGTFLYVAYMEVIPKELRDPSHMVL-KLTALLTGFCLMSLL 294
BLAST of NO04G03710 vs. NCBI_GenBank
Match: OQS06214.1 (zinc (Zn2)-Iron (Fe2) Permease (ZIP) family [Thraustotheca clavata]) HSP 1 Score: 83.2 bits (204), Expect = 2.400e-12 Identity = 57/143 (39.86%), Postives = 86/143 (60.14%), Query Frame = 0 Query: 324 ALCLLAALGFHSVIEGLGLATATTQNDATQVGVFIAILAHKGLAGLTLGTTMLLAEASQTEFLGTALLFSVATPLGVGLGALISSYCKSAE--ALGLMAAIAAGTFIHVAAIEIIPSAFRDTSATHLAKLASLTVGFLAMSAL 465 A L AL FHSV+EGLG+ +T GVF+AI+ HKGLA LGT ML + ++++F+G LLFS+ + +G+ +G +++ S + A G+ A+A+GTFI+VA +EIIP F ++ L K L G+ A+ Sbjct: 160 AFVLFVALSFHSVLEGLGIGAQST----PAWGVFLAIIIHKGLAAFALGTGMLKGQLTKSKFIGYMLLFSLMSIIGIIIGWAVNAADSSEDSAAAGICLALASGTFIYVAVMEIIPQEFSHGKSS-LQKTLLLCFGYGVFGAI 297
BLAST of NO04G03710 vs. NCBI_GenBank
Match: XP_005643729.1 (Zinc/iron permease [Coccomyxa subellipsoidea C-169] >EIE19185.1 Zinc/iron permease [Coccomyxa subellipsoidea C-169]) HSP 1 Score: 82.8 bits (203), Expect = 3.100e-12 Identity = 60/145 (41.38%), Postives = 86/145 (59.31%), Query Frame = 0 Query: 320 TFAGALCLLAALGFHSVIEGLGLATATTQNDATQVGVFIAILAHKGLAGLTLGTTMLLAEASQTEFLGTALLFSVATPLGVGLGALISSYCKSAEALGLMAAIAAGTFIHVAAIEIIPSAFRDTSATHLAKLASLTVGFLAMSAL 465 +F A + AL FHSV+E G+A N V +FIAI AHKGLA LG++++ ++AS +F F+ ATP+G+ LG ++SS S +A ++A+A+GTF++VA +E+IP S AKL L GF AMS L Sbjct: 275 SFLTAALMGVALCFHSVLE--GMAMGAQANIVDSVHIFIAIAAHKGLAAYALGSSVVDSQASMRKFWTVIGFFASATPVGILLGVVLSSVSNS-DAAASVSALASGTFLYVAFMEVIPRELAMPS-HRTAKLVMLLAGFAAMSIL 415
BLAST of NO04G03710 vs. NCBI_GenBank
Match: XP_008609689.1 (hypothetical protein SDRG_05736 [Saprolegnia diclina VS20] >EQC36908.1 hypothetical protein SDRG_05736 [Saprolegnia diclina VS20]) HSP 1 Score: 82.0 bits (201), Expect = 5.300e-12 Identity = 57/143 (39.86%), Postives = 83/143 (58.04%), Query Frame = 0 Query: 324 ALCLLAALGFHSVIEGLGLATATTQNDATQVGVFIAILAHKGLAGLTLGTTMLLAEASQTEFLGTALLFSVATPLGVGLGALISSYCKSAE--ALGLMAAIAAGTFIHVAAIEIIPSAFRDTSATHLAKLASLTVGFLAMSAL 465 A L AL FHSV+EGLG+ GVF+AI+ HKGLA LGT ML ++ ++T+FL LLFS+ + G+ +G +++ S + A G+ A+A+GTFI+VA +EIIP F ++ L K L G+ A+ Sbjct: 165 AFVLFVALSFHSVLEGLGIGA----QSQPAWGVFLAIIIHKGLAAFALGTGMLKSQMNKTKFLSYMLLFSLMSIFGIIIGWAVNAAESSEDSAAAGICLALASGTFIYVAVMEIIPQEFSHGKSS-LKKTLLLCAGYAVFGAI 302
BLAST of NO04G03710 vs. NCBI_GenBank
Match: XP_002776764.1 (zinc transport protein, putative [Perkinsus marinus ATCC 50983] >EER08580.1 zinc transport protein, putative [Perkinsus marinus ATCC 50983]) HSP 1 Score: 81.6 bits (200), Expect = 6.900e-12 Identity = 57/157 (36.31%), Postives = 92/157 (58.60%), Query Frame = 0 Query: 316 KDLH------TFAGALCLLAALGFHSVIEGLGLATATTQNDATQV-GVFIAILAHKGLAGLTLGTTMLLAEASQTEFLGTALLFSVATPLGVGLGALISSYCKSAEAL-GLMAAIAAGTFIHVAAIEIIPSAFRDTSATHLAKLASLTVGFLAMSAL 465 KD+H + A A+ + AL HS+ EGL L + N+A+Q+ IAI HKGLA LG + + A+ S+ + +++F+ TP G+ +G + + E L G+ +A+AAGTF++V A+E +P +F+ S+ + K +L VG+ AMSAL Sbjct: 143 KDMHHHDVNMSEASAIFIFLALSVHSIFEGLSLGAS---NNASQIASTLIAIAIHKGLAAYALGASFIEAKVSKWRMVIFSVIFAFMTPAGIAIGWGLEAAESDTEVLSGVCSALAAGTFLYVGALEFVPMSFKPGSSYIIWKFVALLVGYGAMSAL 296
BLAST of NO04G03710 vs. NCBI_GenBank
Match: XP_002782952.1 (conserved hypothetical protein [Perkinsus marinus ATCC 50983] >EER14748.1 conserved hypothetical protein [Perkinsus marinus ATCC 50983]) HSP 1 Score: 81.6 bits (200), Expect = 6.900e-12 Identity = 58/146 (39.73%), Postives = 84/146 (57.53%), Query Frame = 0 Query: 323 GALCLLAALGFHSVIEGLGLATATTQNDATQVGVFIAILAHKGLAGLTLGTTMLLAEASQTEFLGTALLFSVATPLGVGLGALISSYCKSAEALGLMA----AIAAGTFIHVAAIEIIPSAFRDTSATHLAKLASLTVGFLAMSAL 465 GA+ L AL FHSV+EGLG+ +AT + + V AILAHK LA LG +++ + S F +L+F+ TP+G LG + S KS A + A+A+GTF+ V+++EIIP F +KL ++ VGF AM+ L Sbjct: 233 GAMTLFIALSFHSVMEGLGVGSATHSWEV--IPVLTAILAHKALAAFALGCSLVESTVSGRRFFVYSLIFAAGTPVGALLGNIGISSGKSVHAAAVFTATCKALASGTFLQVSSMEIIPQVFASAEG-RFSKLTAILVGFGAMATL 375 The following BLAST results are available for this feature:
BLAST of NO04G03710 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO04G03710 ID=NO04G03710|Name=NO04G03710|organism=Nannochloropsis oceanica|type=gene|length=2945bpback to top protein sequence of NO04G03710.1 >NO04G03710.1-protein ID=NO04G03710.1-protein|Name=NO04G03710.1|organism=Nannochloropsis oceanica|type=polypeptide|length=469bpback to top Synonyms
Publications
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