NO04G03590, NO04G03590 (gene) Nannochloropsis oceanica

Overview
NameNO04G03590
Unique NameNO04G03590
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1140
Alignment locationchr4:973360..974499 -

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Properties
Property NameValue
DescriptionTwinfilin-like protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr4genomechr4:973360..974499 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0030837negative regulation of actin filament polymerization
GO:0030837negative regulation of actin filament polymerization
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
Vocabulary: Molecular Function
TermDefinition
GO:0003779actin binding
GO:0003779actin binding
Vocabulary: INTERPRO
TermDefinition
IPR028458Twinfilin
IPR002108ADF-H
Homology
BLAST of NO04G03590 vs. NCBI_GenBank
Match: EWM28758.1 (twinfilin-like protein [Nannochloropsis gaditana])

HSP 1 Score: 236.5 bits (602), Expect = 1.400e-58
Identity = 157/385 (40.78%), Postives = 210/385 (54.55%), Query Frame = 0
Query:    2 VRAHLAVSESLLDVFQ---QPESARLLRINIKGEALELAAPPLWKQADEEADFHAMVVEGVLRASPIPSSSLLIFTLDDGTRVLIKYLGLSCPVREKMLYSSSITDLKRGCAANLSLFEAHEREDVTFSGLLDALGKRRKAPAGGVATMMASXXXXXQQPAPHPLTKL-EELTLAERGTEKNAGVRLHGMSRSSLEIHPDARAALAKVRAAGEPGNWLALALVEETVVVAALLSVSF----PSINDNVFRNEGILSSTLPTDEPRFIIVAQQ-PQHVFIYYCPQVAPIKQKLAYSTAKEVVVKALSATKAFDLVIEVGEIDDLVQALATSHEEAGTSRRCDNSDESGSSISSSTRLSGESTPKLEHPLLARARPRRPGKPRPRVV 378
            +RAHL+VS+ LL   Q      S RLL I I+ E L LA PP+ K   EE DF  +VVE +++A    +++LL+  +DD   VLIKYL L+CPVREKMLYSSS+ DL+RG A + SLFE HE ED++F  L   L   R    G     +A+        +P   T L  EL   ER   +N GVRLHGMS     +  D R AL +V    +P NW+ LAL EE ++V A+ +V F       +DN+  +   LSS LP DEPRF++  QQ  QHVF++YCPQ A IKQK  +S AK  +++AL     FD ++E  + +  +Q+L +     G     D+SD                   L HPLL   RPR P +P  R +
Sbjct:    1 MRAHLSVSDGLLAACQPLHTVTSTRLLHIKIEAECLVLAEPPIKKIGSEEDDFQHLVVERLMQAP--NTAALLLIAMDDHPPVLIKYLPLTCPVREKMLYSSSVADLRRGLAIHFSLFETHELEDMSFLNLTGTLACWRATERGNA---IATAPIDDGVESPLLSTSLYGELAPTERAVARNVGVRLHGMSHVPFTMRSDVREALVRVLETRKPENWMELALKEEKIIVIAVRTVPFERDMERQDDNLQESAVHLSSLLPLDEPRFLVFTQQDSQHVFVFYCPQTASIKQKFTFSAAKSTLIEALGGYNIFDRIVEATDPNVTIQSLMSC--SRGCKECVDHSD------------------VLHHPLLTETRPRGPKRPSARSI 360          
BLAST of NO04G03590 vs. NCBI_GenBank
Match: KZO97719.1 (actin depolymerizing protein [Calocera viscosa TUFC12733])

HSP 1 Score: 78.6 bits (192), Expect = 4.700e-11
Identity = 78/301 (25.91%), Postives = 132/301 (43.85%), Query Frame = 0
Query:    2 VRAHLAVSESLLDVFQQPESARLLRINIKGEALELAAP-PLWKQADEEADFHAMVVEGVLRASPIPSSSLLIFTLDDGTRVLIKYLGLSCPVREKMLYSSSITDLKRGCAANLSLFEAHEREDVTFSGLLDALGKRRKAPAGGVATMMASXXXXXQQPAPHPLTKLEELTLAERGTEKNAGVRLHGMSRSSLEIHPDARAALAKVRAAGEPGNWLALALVEETVVVAALLSVSFPSINDNVFRNEGILSSTLPTDEPRFII----VAQQPQHVFIYYCPQVAPIKQKLAYSTAK-EVVVKA 297
            V + + VSE L D FQQ    R+++++I+ E+L ++   PL      +    + +VE  + A       LL+     G  +L+ Y+  + PVR+KMLY+S+   L RG  A+  +  A        S L   L  R    AGG     A+       P     T+L ++  AE             + RS +   P+A AA+A ++        L +   +E  V+    S   P  +         L++ LP  EP ++        QP  +FI++CP  + IK K+ ++ ++  V++KA
Sbjct:    4 VTSGITVSEELSDQFQQSSGTRVIKVSIENESLVVSKTLPLTSSLSTDVQSISSIVEANVAA------YLLVQQDMKGRWILVSYVPDTAPVRQKMLYASTRNALTRGLGASAFVDSAFISSS---SELASTLSTRTTPSAGGGPARSATSPGLI--PLSSRETELADIAAAEAKERARDNTPRSQIHRSGMSWEPEAEAAIADLKEGDGKLVILGVQTSKEKDVIVLKNSTIVPVGHG--------LTNALPKGEPSYVFYTLSTGGQPSILFIFFCPDDSSIKDKMVHAGSRWNVILKA 285          
BLAST of NO04G03590 vs. NCBI_GenBank
Match: OQR99681.1 (twinfilin-like protein [Achlya hypogyna])

HSP 1 Score: 78.6 bits (192), Expect = 4.700e-11
Identity = 92/331 (27.79%), Postives = 143/331 (43.20%), Query Frame = 0
Query:    6 LAVSESLLDVF---QQPESARLLRINIKGEALELAAPPLWKQADEEADFHAMVVEGVLRASPIPSSSLLIFTLDDG--TRVLIKYLGLSCPVREKMLYSSSITDLKRGCAANLSLFEAHEREDVTFSGLLDALGKRRKAPAGGVATMMASXXXXXQQPAPHPLTKLEELTLAERGTEKNAGVRLHGMSRSSLEIHPDARAALAKVRAAGEPGNWLALALVEETVVVAALLSVSFPSINDNVFRNEGILSSTLPTDEPRFIIVAQQPQH--VFIYYCPQVAPIKQKLAYSTAKEVVVKALSATK-AFDLVIEVGEIDDLVQALAT--SHEEA 327
            L V ++L  +F   Q+  S R L + I+GE L L A       D +A++ A     +   +  PS  L+     +G    VLI ++  S P REKMLY+S+   LK+    +  + + H  +  TF G  D L                            PL++ E L   E   E++  V+   MS     I P   AAL    A    G++L++ L  ET+ V   L  +          +E  LS  L    P +++     +   VF+Y CP  AP++ K+ YSTAK  V+  L A     D  IE+ ++   ++A+ +  +HEEA
Sbjct:    6 LRVGDALASIFQRVQEDRSTRCLDVKIEGEEL-LCAQTFPVAGDVQAEWVA-----IQAGTTAPSLLLVHIESSNGPWKWVLIAHVPDSLPAREKMLYASARDCLKQQLGLSYFVGDVHTTDLATF-GYRDVLATTHNNIG--------------------PLSEKEVLLKEEARLERDLSVKASAMSVMPFGIAPACAAAL---DAFASGGSFLSMQLENETLTVLKQLPAT----------HEVHLSLELARHVPSYVLYRHSDRRLVVFLYVCPDDAPVRLKMTYSTAKASVLALLPAHNITVDKTIEITDVATALEAIQSDIAHEEA 296          
BLAST of NO04G03590 vs. NCBI_GenBank
Match: XP_012197958.1 (hypothetical protein SPRG_03978 [Saprolegnia parasitica CBS 223.65] >KDO31361.1 hypothetical protein SPRG_03978 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 78.2 bits (191), Expect = 6.200e-11
Identity = 90/332 (27.11%), Postives = 146/332 (43.98%), Query Frame = 0
Query:    6 LAVSESLLDVFQQPE---SARLLRINIKGEALELAAPPLWKQADEEADFHAMVVEGVLRA------SPIPSSSLLIFTLDDGTR----VLIKYLGLSCPVREKMLYSSSITDLKRGCAANLSLFEAHEREDVTFSGLLDALGKRRKAPAGGVATMMASXXXXXQQPAPHPLTKLEELTLAERGTEKNAGVRLHGMSRSSLEIHPDARAALAKVRAAGEPGNWLALALVEETVVVAALLSVSFPSINDNVFRNEGILSSTLPTDEPRFIIV----AQQPQHVFIYYCPQVAPIKQKLAYSTAKEVVVKALSATK-AFDLVIEVGEIDDLVQAL 320
            L V ++L  +FQQ +   S R L + ++ E L  A              HA  V+G   A      +   + SLL+F +         +L+ ++  + P REKMLY+S+   LK+    +  + + H  +  +FS   D L           +TM  +           PL++ E L   E   E++  V+   MS     + P   AAL     A  P  +L+L L  E +VVA  L    P+++D+      +LSS +    P +++     A     VF+Y CP  AP++ K+ YSTAK  V+  L A   A D  +E+ ++  +V A+
Sbjct:    6 LRVGDALTALFQQAQDGNSTRCLDVKVENETLVCA--------------HAFPVDGPPEAQWAAIQAGTTAPSLLLFHIASSNGPWKWILVAHVADTLPAREKMLYASARDCLKQQLGLSYFVGDVHTTDLASFS-FHDVL-----------STMHNNTG---------PLSEKEVLLKEEARLERDLSVKASAMSVMPFGLTPGCAAALDTFAIATSPA-FLSLHLENEALVVAKAL----PNVHDS------LLSSEITKHAPSYVLYRFPSAGATVVVFLYVCPDDAPVRAKMTYSTAKASVLALLPAHHIAIDKTVEITDVASVVDAI 291          
BLAST of NO04G03590 vs. NCBI_GenBank
Match: XP_008619606.1 (hypothetical protein SDRG_15217 [Saprolegnia diclina VS20] >EQC27004.1 hypothetical protein SDRG_15217 [Saprolegnia diclina VS20])

HSP 1 Score: 73.6 bits (179), Expect = 1.500e-9
Identity = 92/336 (27.38%), Postives = 146/336 (43.45%), Query Frame = 0
Query:    6 LAVSESLLDVFQQPE---SARLLRINIKGEALELAAPPLWKQADEE--ADFHAMVVEGVLRASPIPSSSLLIFTLDDGTR----VLIKYLGLSCPVREKMLYSSSITDLKRGCAANLSLFEAHEREDVTFSGLLDALGKRRKAPAGGVATMMASXXXXXQQPAPHPLTKLEELTLAERGTEKNAGVRLHGMSRSSLEIHPDARAALAKVRAAGEPGNWLALALVEETVVVAALLSVSFPSINDNVFRNEGILSSTLPTDEPRFIIV-AQQPQHVFIYYCPQVAPIKQKLAYSTAKEVVVKALSATK-AFDLVIEVGEIDDLVQAL----ATSHEEA 327
            L V ++L  +FQQ +   S R L + ++ E L  A      +A E   A+  A             + SLL+F +         +LI ++  + P REKMLY+S+   LK+    +  + + H  +   F+   D L           +TM  +           PL++ E L   E   E++  V+   MS     + P   AAL     A  P  +L+L L  E +VVA  L    P++      +E +LSS +    P +++        VF+Y CP  AP++ K+ YSTAK  V+  L A   A D  IE+ ++  +  A+    AT  +EA
Sbjct:    6 LRVGDALTTLFQQAQDGNSTRCLDVKVENETLVCATAFPVDEAPEAQWANIQASTT----------APSLLLFHIASSNGPWKWILIAHVADTLPAREKMLYASARDCLKQQLGLSYFVGDVHTTDLAAFT-FHDVL-----------STMHNNSG---------PLSEKEVLLKEEARLERDLSVKASAMSVMPFGLTPACAAALDTFAIATSPA-FLSLHLENEALVVAKAL----PNV------HESLLSSEMTKHAPSYVLYRVSSTGVVFLYVCPDDAPVRAKMTYSTAKASVLALLPAHHIAIDKTIEITDVATVADAIRADVATDLDEA 299          
BLAST of NO04G03590 vs. NCBI_GenBank
Match: XP_009035875.1 (expressed protein [Aureococcus anophagefferens] >EGB09844.1 expressed protein [Aureococcus anophagefferens])

HSP 1 Score: 72.8 bits (177), Expect = 2.600e-9
Identity = 105/377 (27.85%), Postives = 155/377 (41.11%), Query Frame = 0
Query:    1 MVRAHLAVSESLLDVF---QQPESARLLRINIKGEALELAAPPLWKQADEEADFHAMVVEGVLRASPIPSSSLLIFTLDDGTRV--------LIKYLGLSCPVREKMLYSSSITDLK----RGCAANLSLFEAHEREDVTFSGLLDALGKRRKAPAGGVATMMASXXXXXQQPAPHPLTKLEELTLAERGTEKNAGVRLHGMSRSSLEIHPDARAALAKVRAAGEPGNWLALALVEETVVVAALLSVSFPSINDNVFRNEGILSSTLPT-DEPRFIIVAQQ-----PQHVFIYYCPQVAPIKQKLAYSTAKEVVVKALSATKAFD--LVIEVGEIDDL---VQALATSHEEAGTSRRCDNSDESGSSISSSTRLSGE 352
            M RA+LAV   L   F   Q+ +  R L+  ++GEA+ L +      A   ADF A+  +  L    I   + ++F+ D             L+ ++  S   R KM+YSSS  DLK     G  ++   + A++  D+ +S +         A AGG               AP PLT  E     E+  EK+    + GM+     +  D  AAL +   AGE         VE  V     L ++ P          G L   L   D PRF++VA+         +F+YYCP+ AP+K K+ YSTAK      L+     D    +EV +  DL   V A+     +    +   NS   G    S+TR S +
Sbjct:    1 MARAYLAVDVELASAFLAAQEDKGLRWLKAKVEGEAVRLVSSGR-MGASIGADFDALQADASL---AIDEPAFVLFSRDAEALAAGAARSWQLVCWVPDSAAPRLKMIYSSSREDLKGSLGGGFFSSFKDYCANDGGDMAWSHVAG-------AEAGG---------------APAPLTDKELFLKEEQKLEKDTRSSV-GMASVPFRLADDLEAAL-RAFVAGEAD------FVEAVVGDCETLKLAAP---HQTLGGAGDLKDALSALDAPRFLLVAKPKPGGGAAKLFVYYCPESAPVKAKMTYSTAKATFADILAGPLGVDPEKTLEVRDAGDLQADVDAVVAPPADDRAIKHAANSKPKGPGRRSTTRGSAK 340          
BLAST of NO04G03590 vs. NCBI_GenBank
Match: OWZ14485.1 (Twinfilin [Phytophthora megakarya])

HSP 1 Score: 70.1 bits (170), Expect = 1.700e-8
Identity = 77/306 (25.16%), Postives = 132/306 (43.14%), Query Frame = 0
Query:    1 MVRAHLAVSESLLDVFQQPESARL--LRINIKGEALELAAPPLWKQADEEADFHAMVVEGVLRASPIPSSSLLIFTLDDGTR----VLIKYLGLSCPVREKMLYSSSITDLKRGCAAN--LSLFEAHEREDVTFSGLLDALGKRRKAPAGGVATMMASXXXXXQQPAPHPLTKLEELTLAERGTEKNAGVRLHGMSRSSLEIHPDARAALAKVRAAGEPGNWLALALVEETVVVAALLSVSFPSINDNVFRNEGILSSTLPTDEPRFIIVAQQ----PQHVFIYYCPQVAPIKQKLAYSTAKEVVV 295
            M RA+L +S  L   F   +S +L  ++++I  E+  L+A  +   A+  AD   +V   +        +S ++  +D        VL+ ++  S  VR++MLYSSS   LK+    N     F A E  +VT+   L+A   R+K                  Q A  PL++ E L       E++  V+   M     EI  + R  L  ++      +W+A+ L E+   V  + S+    + D        + +TL    P F+    +       +F+Y CP+ +P++ K+ YST K  V+
Sbjct:    1 MARANLLLSADLERAFADAQSGKLRYVKVSIDDESFVLSA--VGAAAEPRADVEQLVTTHL----DAQQASFVLLCVDTNVAALRWVLLAFVPESVSVRDRMLYSSSRDSLKKQLGLNYFAGEFHATELSEVTWESFLEA---RKK------------------QAADAPLSESERLLKEAAKLERDTNVKSSAMGVVPFEITQNVRDKLRLLQ--DNKFDWIAMKLSEDNESVEVVKSLESVELID--------VPATLDRRSPSFVAYRYRAPGATSLIFMYVCPEDSPVRLKMVYSTCKATVL 269          
BLAST of NO04G03590 vs. NCBI_GenBank
Match: EJU05194.1 (actin depolymerizing protein [Dacryopinax primogenitus])

HSP 1 Score: 68.6 bits (166), Expect = 4.900e-8
Identity = 97/391 (24.81%), Postives = 165/391 (42.20%), Query Frame = 0
Query:    2 VRAHLAVSESLLDVFQQPESARLLRINIKGEALELAAP-PLWKQADEEADFHAMVVEGVLRASPIPSSSLLIFTLDD-GTRVLIKYLGLSCPVREKMLYSSSITDLKRGCAANLSLFEAHEREDVTFSGLLDALGKRRKAPAGGVATMMASXXXXXQQPAPHPLTKLEELTLAERGTEKNAGVR------LHGMSRSSLEIHPDARAALAKVRAAGEPGNWLALALVEETVVVAALLSVSFPSI-----NDNVFRNEGILSSTLPTDEPRFIIVAQQPQH----VFIYYCPQVAPIKQKLAYSTA-KEVVVKALSATKAFDLVIEVGEIDDLVQALATSHEEAGTSRRCDNSDESGSSISSSTRLSGESTPKLEHPLLAR---ARPRRPGK 372
            + + + VSE L   F+Q    R+++++I  E L ++   PL      +    + +V+         +++ L+  LD  G  VL+ Y+  +C VR+KMLY+S+   L RG  A   +  A        S L   L  R  +  GG     A+       P   PL+  E+   + R  E     R      LH   RS ++   DA AA++++               E  VVV  + +     +      ++V   +G L+S LP  EP +++ A         +F+Y+CP  A +K+K+ YST+   VV KA   +      IEV E+ +L      S  +             G++ + +  ++G    +    + A+   ARP RPG+
Sbjct:    4 ITSGITVSEELSTQFKQSAGTRVIKVSIDNELLVVSKTLPLTSSLSSDVQHISSIVDA-------DTAAYLLVQLDSKGKWVLVSYVPDTCTVRQKMLYASTRNALTRGLGAAAFVDSAFISAP---SDLASTLVSRSTSSTGGGPARSAT------SPGLIPLSNGEKELASIRAAEAVELARSTTPRSLH--QRSDMQFEEDADAAISELNDG------------EGQVVVLGIKTGKEKDVFVLKNKEDVPHGQG-LASVLPKGEPSYVLYALSVNGNRVILFVYFCPNDASVKEKMVYSTSFWNVVKKAEEHSLNLARRIEVSELSELTYDHLISELK-----------REGAAPTGAGTVAGAPADRASSSVSAQRGFARPTRPGR 352          
BLAST of NO04G03590 vs. NCBI_GenBank
Match: XP_002908514.1 (twinfilin-like protein [Phytophthora infestans T30-4] >EEY61597.1 twinfilin-like protein [Phytophthora infestans T30-4])

HSP 1 Score: 67.4 bits (163), Expect = 1.100e-7
Identity = 80/304 (26.32%), Postives = 131/304 (43.09%), Query Frame = 0
Query:    1 MVRAHLAVSESLLDVFQQPESARL--LRINIKGEALEL-AAPPLWKQADEEADFHAMVVEGVLRASPIPSSSLLIFTLDDGTR-VLIKYLGLSCPVREKMLYSSSITDLKRGCAANL--SLFEAHEREDVTFSGLLDALGKRRKAPAGGVATMMASXXXXXQQPAPHPLTKLEELTLAERGTEKNAGVRLHGMSRSSLEIHPDARAALAKVRAAGEPGNWLALALVEETVVVAALLSVSFPSINDNVFRNEGILSSTLPTDEPRFII----VAQQPQHVFIYYCPQVAPIKQKLAYSTAKEVVV 295
            M RA+L +S  L   F   +S +L  ++++I+GE+  L AA P   +   + +    +V   L A       L   T     R VL+ ++  S  VR++MLYSSS   LK+    N     F A E  +VT++  L+A   R+K                  Q A  PL++ E L       E++  V+   M     EI  + R  L  ++      +W+A+ L E+   V  + S+    + D        + +TL    P F+            +F+Y CP+ +P++ K+ YST K  V+
Sbjct:    1 MARANLLLSAELERAFADAQSGKLRFVKVSIEGESFVLSAAGPASSEPRNDVE---QLVTSNLNAEQAAFVLLCPDTNVAALRWVLLAFVPESVSVRDRMLYSSSRDSLKKQLGLNYFSGEFHATELSEVTWASFLEA---RKK------------------QAADAPLSESERLLKEAALLERDTNVKSSAMGVVPFEITQNVRDKLRLLQ--DNKFDWIAMKLSEDNESVEVVKSLENVQLID--------VPTTLDRRSPSFVAYRYRAGATSALIFMYVCPEDSPVRLKMVYSTCKATVL 270          
BLAST of NO04G03590 vs. NCBI_GenBank
Match: XP_007385800.1 (actin depolymerizing protein [Punctularia strigosozonata HHB-11173 SS5] >EIN07507.1 actin depolymerizing protein [Punctularia strigosozonata HHB-11173 SS5])

HSP 1 Score: 66.6 bits (161), Expect = 1.900e-7
Identity = 82/309 (26.54%), Postives = 128/309 (41.42%), Query Frame = 0
Query:    6 LAVSESLLDVF----QQPESARLLRINIKGEAL----ELAAPPLWKQADEEADFHAMVVEGVLRASPIPSSSLLIFTLDDGTRVL-IKYLGLSCPVREKMLYSSSITDLKRGCAANLSLFEAHEREDVTFSGLLDALGKRRKAPAGGVATMMASXXXXXQQPAPHPLTKLEELTLAERGTEKNAG-----------VRLHGMSRSSLEIHPDARAALAKVRAAGEPGNWLALALVEETVVVAALLSVSFPSINDNVFRNEGILSSTLPTDEPRFIIV-----AQQPQHVFIYYCPQVAPIKQKLAYSTA 290
            + VS +L D F     +P +AR +++ I+ E+L    ELA  P     D+     +++ + V         + ++  LDDG   L I Y+  +  VR+KMLY+S+   L +      SL   H      F+  L A  K    P+G  A +           AP P+T  E+   A R  E+ AG             + G     L  HPDA  A+ +          LA       VV+    +    ++  +V      L + LPTD P F        A + + V++Y CP  AP+K ++ YS+A
Sbjct:    7 IGVSPALSDAFAAAVDEPHTARFIKVAIRNESLVPDGELA--PAGSFTDDLNKLQSLLSDDV--------PAYVLARLDDGAGWLAISYVPDTAGVRDKMLYASTRASLTK------SLGAPH------FTDTLFATSKSDLTPSGYAAHL-------AHLAAPKPMTPREQEAAAVRAAERAAGQDDYRGSGARVAHVGGQGAVGLTWHPDAEGAVRR----------LADVNASRIVVLTIEPATETLTLQSDVECPVDQLGAVLPTDAPCFAFFAWAHSASKREVVYVYSCPTGAPVKPRMVYSSA 276          
The following BLAST results are available for this feature:
BLAST of NO04G03590 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 10
Match NameE-valueIdentityDescription
EWM28758.11.400e-5840.78twinfilin-like protein [Nannochloropsis gaditana][more]
KZO97719.14.700e-1125.91actin depolymerizing protein [Calocera viscosa TUF... [more]
OQR99681.14.700e-1127.79twinfilin-like protein [Achlya hypogyna][more]
XP_012197958.16.200e-1127.11hypothetical protein SPRG_03978 [Saprolegnia paras... [more]
XP_008619606.11.500e-927.38hypothetical protein SDRG_15217 [Saprolegnia dicli... [more]
XP_009035875.12.600e-927.85expressed protein [Aureococcus anophagefferens] >E... [more]
OWZ14485.11.700e-825.16Twinfilin [Phytophthora megakarya][more]
EJU05194.14.900e-824.81actin depolymerizing protein [Dacryopinax primogen... [more]
XP_002908514.11.100e-726.32twinfilin-like protein [Phytophthora infestans T30... [more]
XP_007385800.11.900e-726.54actin depolymerizing protein [Punctularia strigoso... [more]
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL076nonsL076Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR058ncniR058Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR106ngnoR106Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK009506NSK009506Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO04G03590.1NO04G03590.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|579226gene_2138Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100002g31gene1898Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO04G03590.1NO04G03590.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO04G03590 ID=NO04G03590|Name=NO04G03590|organism=Nannochloropsis oceanica|type=gene|length=1140bp
ATGGTACGGGCGCACCTGGCCGTCTCGGAGAGTCTTCTCGACGTCTTCCA
GCAGCCGGAGTCTGCCCGCCTTCTCCGCATCAACATCAAAGGCGAGGCTC
TGGAGCTGGCAGCCCCTCCCCTATGGAAGCAGGCAGATGAGGAGGCAGAT
TTTCATGCAATGGTGGTGGAGGGTGTGCTCCGAGCTTCCCCCATCCCATC
CTCTTCCTTGCTGATATTTACACTCGATGACGGCACGCGGGTGCTCATCA
AATACCTGGGCCTCTCCTGTCCCGTGCGCGAAAAAATGCTCTACTCCTCC
TCAATTACGGACCTGAAGAGGGGCTGTGCTGCCAACCTTTCCCTCTTTGA
AGCGCACGAACGGGAAGATGTGACTTTCTCCGGCCTGCTGGATGCTCTCG
GTAAGCGACGGAAAGCACCAGCAGGTGGAGTGGCTACCATGATGGCGTCA
TCCCAGCAGCAGTCACAGCAGCCTGCACCTCATCCACTCACGAAATTGGA
GGAGCTAACCCTGGCAGAAAGGGGGACGGAGAAGAACGCGGGCGTGCGGC
TTCATGGCATGAGCCGCTCGTCTCTCGAAATACATCCCGACGCGAGGGCA
GCGCTTGCGAAAGTCCGAGCGGCGGGCGAGCCGGGAAACTGGTTAGCATT
GGCCTTGGTTGAGGAAACAGTGGTGGTTGCCGCCCTTCTTTCGGTGTCTT
TTCCATCAATCAATGACAATGTATTTAGGAATGAAGGGATCTTGTCCTCT
ACGCTGCCCACAGACGAACCAAGGTTTATAATCGTGGCCCAGCAACCACA
GCATGTCTTCATTTACTACTGCCCGCAGGTTGCGCCCATTAAACAAAAAC
TTGCTTATTCTACTGCGAAGGAAGTGGTGGTTAAGGCTTTGAGTGCCACC
AAGGCGTTCGACCTTGTGATAGAAGTAGGGGAAATTGATGACCTTGTGCA
AGCCTTGGCGACAAGCCATGAGGAGGCAGGCACCAGCCGTCGTTGTGACA
ATAGTGATGAAAGTGGTAGTAGTATCAGTAGTAGTACACGTTTAAGCGGA
GAGTCCACCCCAAAACTGGAACATCCATTGCTAGCGCGTGCCCGACCAAG
ACGTCCGGGAAAGCCACGGCCTCGTGTGGTGGAGGGATGA
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protein sequence of NO04G03590.1

>NO04G03590.1-protein ID=NO04G03590.1-protein|Name=NO04G03590.1|organism=Nannochloropsis oceanica|type=polypeptide|length=380bp
MVRAHLAVSESLLDVFQQPESARLLRINIKGEALELAAPPLWKQADEEAD
FHAMVVEGVLRASPIPSSSLLIFTLDDGTRVLIKYLGLSCPVREKMLYSS
SITDLKRGCAANLSLFEAHEREDVTFSGLLDALGKRRKAPAGGVATMMAS
SQQQSQQPAPHPLTKLEELTLAERGTEKNAGVRLHGMSRSSLEIHPDARA
ALAKVRAAGEPGNWLALALVEETVVVAALLSVSFPSINDNVFRNEGILSS
TLPTDEPRFIIVAQQPQHVFIYYCPQVAPIKQKLAYSTAKEVVVKALSAT
KAFDLVIEVGEIDDLVQALATSHEEAGTSRRCDNSDESGSSISSSTRLSG
ESTPKLEHPLLARARPRRPGKPRPRVVEG*
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Synonyms
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