NO04G03530, NO04G03530 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO04G03530 vs. NCBI_GenBank
Match: EWM28780.1 (16s rrna methyltransferase [Nannochloropsis gaditana]) HSP 1 Score: 364.8 bits (935), Expect = 3.200e-97 Identity = 180/243 (74.07%), Postives = 198/243 (81.48%), Query Frame = 0 Query: 79 PATSIEVACKGFTAEAKARFSELTPGQWAKLEALGALVQEWNGKVNVISRKDIENVLLRHVLPCMGISKLLAKAPSGTKLMDVGTGGGFPGLPLAICCPHVHFWLVDSIGKKVKVVGDMAARLGLKNVTAWHTRVEEVREKFHYITGRSVTAMPRFVGWVQDKF-IVPSAAAEAVAAAVEGEMTPSRGILYIKGGINEENQEEDLGGWAPTARYPISELIGGGVYEGDKSVLHFSVQDLQRGP 321 P I V+ GFTA+AKARF ELTP QW +LE LGALVQEWN KVNVISRKD+ENVL HVLPCMGISKLL+KA GTK+MDVGTGGGFPGLPLAICCP V FWLVDSIGKKV+VVGDMA RLGL+NV HTRVEEVRE+F+++TGRSVTAMPRFVGWV+DK PSA + V P GILYIKGG+++E QEEDLGGW PT RYPI ELIGG VY GDKSVLHFSVQDL+RGP Sbjct: 49 PQKQIPVSRAGFTAQAKARFPELTPVQWERLERLGALVQEWNCKVNVISRKDVENVLSHHVLPCMGISKLLSKAAEGTKVMDVGTGGGFPGLPLAICCPQVKFWLVDSIGKKVRVVGDMAVRLGLQNVRVRHTRVEEVRERFNFVTGRSVTAMPRFVGWVKDKLHAAPSAPLKGV---------PDDGILYIKGGVSDETQEEDLGGWMPTGRYPIGELIGGDVYGGDKSVLHFSVQDLRRGP 282
BLAST of NO04G03530 vs. NCBI_GenBank
Match: EWM29945.1 (16s rrna methyltransferase [Nannochloropsis gaditana]) HSP 1 Score: 206.8 bits (525), Expect = 1.100e-49 Identity = 113/262 (43.13%), Postives = 149/262 (56.87%), Query Frame = 0 Query: 92 AEAKARFSELTPGQWAKLEALGALVQEWNGKVNVISRKDIENVLLRHVLPCMGISKLLAKAPSGTKLMDVGTGGGFPGLPLAICCPHVHFWLVDSIGKKVKVVGDMAARLGLKNVTAWHTRVEEVR-EKFHYITGRSVTAMPRFVGWVQDKFIVPSAAAEAVAAAVEGEM---------TPSRGILYIKGGINEENQEEDLGGW------------------------APTARYPISELIGGGVYEGDKSVLHFSVQDLQRG 320 A+ K + +L P QW ++EAL L+ E N K+NVISRKDI+NVL H+LP +G++ LL KAP+GT ++D+GTGGGFPGLPLAI CP ++ LVD+ GKK++ V M+ARL LKNV H R+EEV+ ++F Y+ GRSVTA+PRF+ W Q K VP E E P G+LY+ G + + GG P YP+ L+ G VYEGDK V HFS L +G Sbjct: 131 AKTKEAWPDLRPAQWKQIEALANLLVEINTKINVISRKDIQNVLPNHILPALGLATLLRKAPAGTSVLDIGTGGGFPGLPLAIACPQLNLLLVDATGKKIRAVAAMSARLNLKNVATLHARIEEVQGQRFDYVVGRSVTAIPRFLRWAQPKLKVPRQGGRGREKTGESEEKGPLEDEFGVPVPGVLYVTGLEPTPSTKMARGGXXXXXXXXXXXXXXXXXXXXXXXXCVPDHVYPVQALL-GPVYEGDKHVFHFSAAALVKG 391
BLAST of NO04G03530 vs. NCBI_GenBank
Match: CBN78699.1 (glucose-inhibited division protein B [Ectocarpus siliculosus]) HSP 1 Score: 195.3 bits (495), Expect = 3.400e-46 Identity = 110/251 (43.82%), Postives = 153/251 (60.96%), Query Frame = 0 Query: 79 PATSIEVACKGFTAEAKARFSELTPGQWAKLEALGALVQEWNGKVNVISRKDIENVLLRHVLPCMGISKLLAKAPSGTKLMDVGTGGGFPGLPLAICCPHVHFWLVDSIGKKVKVVGDMAARLGLKNVTAWHTRVEEVREKFHYITGRSVTAMPRFVGWVQDKFIVP-----SAAAEAVAAAVEGEMTPSRGILYIKGGINEENQEEDLGGWAPTARYPISEL-----------IGGGVYE-GDKSVLHFS 313 PA + + F + + F EL+ QWAK+ LG L+ EWNGK+N+ISRKDI NV+ RHV+PC+ ++K L GT ++DVGTGGG PGLPLAIC P V F L+D GKK+K V DMA RLGL NV +H R EEV E F ++ GR+VT +P+FVG++ DK + P S A++ ++ + RGILY++G ++EE E G P+ P+ + +GGGV + G S+ HF+ Sbjct: 201 PAGAATPSTDFFLEDVRPVFDELSDEQWAKVGQLGQLLTEWNGKMNLISRKDIANVMPRHVVPCLAMAKAL-DFEDGTYVLDVGTGGGLPGLPLAICFPKVKFTLIDGTGKKIKAVADMADRLGLTNVRTFHVRAEEVYEAFDFVMGRAVTNLPKFVGFI-DKNLKPNDGRTSNPADSNRSSSSSNNSLKRGILYMRGEVSEEELAE--LGARPSTVIPLQRVLEEAGQDGDVGLGGGVDDRGYSSIFHFT 447
BLAST of NO04G03530 vs. NCBI_GenBank
Match: WP_092980283.1 (16S rRNA (guanine(527)-N(7))-methyltransferase RsmG [Robiginitalea myxolifaciens] >SFR32111.1 16S rRNA m(7)G-527 methyltransferase [Robiginitalea myxolifaciens]) HSP 1 Score: 180.3 bits (456), Expect = 1.100e-41 Identity = 93/211 (44.08%), Postives = 128/211 (60.66%), Query Frame = 0 Query: 98 FSELTPGQWAKLEALGALVQEWNGKVNVISRKDIENVLLRHVLPCMGISKLLAKAPSGTKLMDVGTGGGFPGLPLAICCPHVHFWLVDSIGKKVKVVGDMAARLGLKNVTAWHTRVEEVREKFHYITGRSVTAMPRFVGWVQDKFIVPSAAAEAVAAAVEGEMTPSRGILYIKGGINEENQEEDLGGWAPTARYPISELIGGGVYEGDKSV 309 F LT Q + E LG L Q+WN K+NV+SRKD+E + LRHVL +GI+++ + +G +++DVGTGGGFPG+PLAIC P VHF LVD+IGKK++VV D+ LGL N A H R E++ KF Y+ R+V AMP FV WV+D+ P+ + GILY+KGG + E+L + YP++E +E K V Sbjct: 10 FPGLTDSQKRQFEKLGPLYQDWNSKINVVSRKDVEELYLRHVLHSLGIARVW-QFKAGAQILDVGTGGGFPGIPLAICFPEVHFTLVDAIGKKIRVVQDVIQGLGLTNAEAHHIRAEDMDRKFDYVVSRAVAAMPTFVHWVKDRIKAPAPDGQG-------------GILYLKGG----DLTEELAPYPQAKIYPLNEEFDNPFFETKKVV 202
BLAST of NO04G03530 vs. NCBI_GenBank
Match: WP_064500577.1 (MULTISPECIES: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG [unclassified Opitutaceae] >OAS32486.1 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG [Opitutaceae bacterium TAV3] >OAS41140.1 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG [Opitutaceae bacterium TAV4]) HSP 1 Score: 179.1 bits (453), Expect = 2.500e-41 Identity = 99/221 (44.80%), Postives = 133/221 (60.18%), Query Frame = 0 Query: 98 FSELTPGQWAKLEALGALVQEWNGKVNVISRKDIENVLLRHVLPCMGISKLLAKAPSGTKLMDVGTGGGFPGLPLAICCPHVHFWLVDSIGKKVKVVGDMAARLGLKNVTAWHTRVEEVREKFHYITGRSVTAMPRFVGWVQDKFIVPSAAAEAVAAAVEGEMTPSRGILYIKGGINEENQEEDLGGWAPTARYPISELIGGGVYEGDKSVLHFSVQDLQR 319 F E+TP QW L + AL +EWN K+N++SRKDIEN+ H PC+ KLL + +G L+DVGTGGGFPGL LA P HF L DS+GKK+ VV D+A RLGL+NV A + RVE + + ++TGR+VT++P FV + + P A A + TP+ GI+Y KGG + EE G AP + E + G VY DK ++H+ DL R Sbjct: 8 FPEVTPAQWDLLIRMSALHREWNAKINLVSRKDIENLEWHHYAPCIAAVKLL-RLEAGATLLDVGTGGGFPGLILAALYPQAHFTLADSVGKKITVVADIARRLGLRNVEARNVRVETLNRSYDFVTGRAVTSLPGFV-----QLVKPRVRAGA-------KHTPANGIVYWKGGSLAD--EEAALGLAPARVLSLEETL-GDVYFKDKYIVHYPQPDLGR 212
BLAST of NO04G03530 vs. NCBI_GenBank
Match: WP_043586737.1 (16S rRNA (guanine(527)-N(7))-methyltransferase RsmG [Didymococcus colitermitum]) HSP 1 Score: 178.3 bits (451), Expect = 4.200e-41 Identity = 99/221 (44.80%), Postives = 133/221 (60.18%), Query Frame = 0 Query: 98 FSELTPGQWAKLEALGALVQEWNGKVNVISRKDIENVLLRHVLPCMGISKLLAKAPSGTKLMDVGTGGGFPGLPLAICCPHVHFWLVDSIGKKVKVVGDMAARLGLKNVTAWHTRVEEVREKFHYITGRSVTAMPRFVGWVQDKFIVPSAAAEAVAAAVEGEMTPSRGILYIKGGINEENQEEDLGGWAPTARYPISELIGGGVYEGDKSVLHFSVQDLQR 319 F E+TP QW L + AL +EWN K+N++SRKDIEN+ H PC+ KLL + +G L+DVGTGGGFPGL LA P HF L DS+GKK+ VV D+A RLGL+NV A + RVE + + ++TGR+VT++P FV + + P A A + TP+ GI+Y KGG + EE G AP + E + G VY DK ++H+ DL R Sbjct: 8 FPEVTPAQWDLLIRMSALHREWNAKINLVSRKDIENLEWHHYAPCIAAVKLL-RLEAGATLLDVGTGGGFPGLILAALYPQAHFTLADSVGKKITVVADIARRLGLRNVEARNVRVEILNRSYDFVTGRAVTSLPGFV-----QLVKPRVRAGA-------KHTPANGIVYWKGGSLAD--EEAALGLAPARVLSLEETL-GDVYFKDKYIVHYPQPDLGR 212
BLAST of NO04G03530 vs. NCBI_GenBank
Match: WP_036121532.1 (16S rRNA (guanine(527)-N(7))-methyltransferase RsmG [Mangrovimonas yunxiaonensis] >KFB00374.1 16S rRNA methyltransferase [Mangrovimonas yunxiaonensis]) HSP 1 Score: 177.2 bits (448), Expect = 9.500e-41 Identity = 98/217 (45.16%), Postives = 132/217 (60.83%), Query Frame = 0 Query: 98 FSELTPGQWAKLEALGALVQEWNGKVNVISRKDIENVLLRHVLPCMGISKLLAKAPSGTKLMDVGTGGGFPGLPLAICCPHVHFWLVDSIGKKVKVVGDMAARLGLKNVTAWHTRVEEVREKFHYITGRSVTAMPRFVGWVQDKFIVPSAAAEAVAAAVEGEMTPSRGILYIKGGINEENQEEDLGGWAPTARYPISELIGGGVYEGDKSVLHFSVQ 315 F LT Q + +AL L Q+WN K+NV+SRKDIE + LRHVL +GI+K++ P GT++MDVGTGGGFPG+PLAI P F LVDSIGKK+KVV ++ A LGL+NV HTRVEE+ E + +I R+V AMP FV W++ K VA ++ GILY+KGG + E+L + Y +S +E K V+H ++ Sbjct: 8 FPNLTKTQIQQFKALENLYQDWNLKINVVSRKDIEELYLRHVLHSLGIAKVIQFKP-GTRIMDVGTGGGFPGIPLAIMFPECRFHLVDSIGKKLKVVDEVVAGLGLENVKTTHTRVEEIDETYDFIVSRAVAAMPTFVRWIKGK----------VAKTQTNDL--KNGILYLKGG----DLSEELQDYRAATLYELSSFFSEPFFE-TKKVVHLPIK 206
BLAST of NO04G03530 vs. NCBI_GenBank
Match: WP_055859379.1 (16S rRNA (guanine(527)-N(7))-methyltransferase RsmG [Chryseobacterium sp. Leaf180] >KQR94745.1 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG [Chryseobacterium sp. Leaf180]) HSP 1 Score: 174.9 bits (442), Expect = 4.700e-40 Identity = 89/177 (50.28%), Postives = 119/177 (67.23%), Query Frame = 0 Query: 98 FSELTPGQWAKLEALGALVQEWNGKVNVISRKDIENVLLRHVLPCMGISKLLAKAPSGTKLMDVGTGGGFPGLPLAICCPHVHFWLVDSIGKKVKVVGDMAARLGLKNVTAWHTRVEEVREKFHYITGRSVTAMPRFVGWVQDKFIVPSAAAEAVAAAVEGEMTPSR--GILYIKGG 273 F +LT Q ++ E L AL EWN K+NVISRKD+E++ +H+L +GI+K++ AP GTK++DVGTGGGFPG+PLAI P HF L+DSIGKK+ VV ++ L LKNV A H R E+V+EKFH++ R+VT MP F+ W++ KF E E SR G+LY+KGG Sbjct: 10 FPDLTEQQISQFEKLEALYNEWNEKINVISRKDMESLYEKHILHSLGIAKVMQFAP-GTKILDVGTGGGFPGIPLAILFPEAHFTLIDSIGKKITVVNTVSEGLDLKNVKAIHGRAEKVKEKFHFVVSRAVTQMPEFLRWLKGKF--------------EKEQLNSRHNGVLYLKGG 171
BLAST of NO04G03530 vs. NCBI_GenBank
Match: WP_092209172.1 (16S rRNA (guanine(527)-N(7))-methyltransferase RsmG [Bizionia echini] >SFN90817.1 16S rRNA m(7)G-527 methyltransferase [Bizionia echini]) HSP 1 Score: 174.1 bits (440), Expect = 8.000e-40 Identity = 98/217 (45.16%), Postives = 131/217 (60.37%), Query Frame = 0 Query: 98 FSELTPGQWAKLEALGALVQEWNGKVNVISRKDIENVLLRHVLPCMGISKLLAKAPSGTKLMDVGTGGGFPGLPLAICCPHVHFWLVDSIGKKVKVVGDMAARLGLKNVTAWHTRVEEVREKFHYITGRSVTAMPRFVGWVQDKFIVPSAAAEAVAAAVEGEMTPSRGILYIKGGINEENQEEDLGGWAPTARYPISELIGGGVYEGDKSVLHFSVQ 315 F +LT Q AK L AL Q+WN K+NV+SRKDI+ + LRHVL + I+K++ P GTKLMDVGTGGGFPG+PLAI P F LVDSI KK+KVV ++ A L L NV H+RVEE+++ + +I R+V AMP FV W++ K VA E+ GILY+KGG + E+L + Y IS+ +E K V+H ++ Sbjct: 8 FPDLTDDQIAKFTQLEALYQDWNLKINVVSRKDIDELYLRHVLHALAIAKVITFKP-GTKLMDVGTGGGFPGIPLAILFPECSFHLVDSIAKKLKVVDEVVAGLELTNVKTTHSRVEEIKDTYDFIISRAVAAMPTFVHWIKGK----------VAKKQNHEL--KNGILYLKGG----DLSEELQDYKTATIYNISDFYSEAFFE-TKKVVHLPIK 206
BLAST of NO04G03530 vs. NCBI_GenBank
Match: WP_093113797.1 (16S rRNA (guanine(527)-N(7))-methyltransferase RsmG [Salinimicrobium catena] >SDL65253.1 16S rRNA m(7)G-527 methyltransferase [Salinimicrobium catena] >SEF06551.1 16S rRNA m(7)G-527 methyltransferase [Salinimicrobium catena]) HSP 1 Score: 173.7 bits (439), Expect = 1.000e-39 Identity = 94/217 (43.32%), Postives = 129/217 (59.45%), Query Frame = 0 Query: 98 FSELTPGQWAKLEALGALVQEWNGKVNVISRKDIENVLLRHVLPCMGISKLLAKAPSGTKLMDVGTGGGFPGLPLAICCPHVHFWLVDSIGKKVKVVGDMAARLGLKNVTAWHTRVEEVREKFHYITGRSVTAMPRFVGWVQDKFIVPSAAAEAVAAAVEGEMTPSRGILYIKGGINEENQEEDLGGWAPTARYPISELIGGGVYEGDKSVLHFSVQ 315 F E+TP Q K AL L ++WN K+NV+SRKD++ + LRHVL +GI+K + G ++DVGTGGGFPG+PLAI P V+F LVDSIGKK+KVV +++ LGL+NV + RVEE+ KF +I R+V AMP FV WVQ K A E + GILY+KGG + E+L + Y + + +E K V+H ++ Sbjct: 8 FPEITPDQKEKFAALQDLYKDWNSKINVVSRKDVDELYLRHVLHSLGIAK-VQTFKKGASILDVGTGGGFPGIPLAILFPEVNFRLVDSIGKKIKVVNEVSEGLGLQNVVTTNARVEEIDGKFDFIVSRAVAAMPTFVHWVQGKI------------AKESKHELKNGILYLKGG----DLSEELQDYPKATIYELQDYFEEDFFE-TKKVVHLPMK 206 The following BLAST results are available for this feature:
BLAST of NO04G03530 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO04G03530 ID=NO04G03530|Name=NO04G03530|organism=Nannochloropsis oceanica|type=gene|length=1281bpback to top protein sequence of NO04G03530.1 >NO04G03530.1-protein ID=NO04G03530.1-protein|Name=NO04G03530.1|organism=Nannochloropsis oceanica|type=polypeptide|length=367bpback to top Synonyms
Publications
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