NO04G03450, NO04G03450 (gene) Nannochloropsis oceanica

Overview
NameNO04G03450
Unique NameNO04G03450
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length655
Alignment locationchr4:944330..944984 -

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Properties
Property NameValue
DescriptionDolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit OST2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr4genomechr4:944330..944984 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0008250oligosaccharyltransferase complex
GO:0016020membrane
GO:0005783endoplasmic reticulum
GO:0005737cytoplasm
Vocabulary: Molecular Function
TermDefinition
GO:0004579dolichyl-diphosphooligosaccharide-protein glycotransferase activity
GO:0016740transferase activity
Vocabulary: INTERPRO
TermDefinition
IPR003038DAD/Ost2
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
GO:0006464cellular protein modification process
Homology
[Close]
BLAST of NO04G03450 vs. NCBI_GenBank
Match: EWM28787.1 (dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit dad1 [Nannochloropsis gaditana])

HSP 1 Score: 179.1 bits (453), Expect = 7.600e-42
Identity = 89/111 (80.18%), Postives = 102/111 (91.89%), Query Frame = 0 
Query:    1 MISSITAVDVKGVGKSLMAEYKKSATTQTKIVDLFLAFILVTGILQFLYCVIVGSFPFNSFLSGFLSCVGMFALTVSLRLQVSSEKVVEKAFGEYAFCCLLLFFVVFNFIG 112
            M  + +A+D++GVGKSL+AEY+K+A TQTKIVDLFLAFI+ TG+LQFLYC +VG+FPFNSFLSGF SCVGMFALTVSLRLQ+SSEK VEKAFGEY FCCLLLFFVVFNFIG
Sbjct:    1 MTPAASALDIRGVGKSLLAEYRKAANTQTKIVDLFLAFIVATGVLQFLYCALVGTFPFNSFLSGFFSCVGMFALTVSLRLQLSSEKNVEKAFGEYTFCCLLLFFVVFNFIG 111
[Close]
BLAST of NO04G03450 vs. NCBI_GenBank
Match: OQR92618.1 (dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit [Achlya hypogyna])

HSP 1 Score: 115.9 bits (289), Expect = 7.900e-23
Identity = 59/117 (50.43%), Postives = 83/117 (70.94%), Query Frame = 0 
Query:    4 SITAVDVKGVGKSLMAEYKKSATTQTKIVDLFLAFILVTGILQFLYCVIVGSFPFNSFLSGFLSCVGMFALTVSLRLQV---------SSEKVVEKAFGEYAFCCLLLFFVVFNFIG 112
            S  A  V G+   L+A+Y K+   + K++D FLA++L TG+LQF+YC++VG+FPFNSFLSGF+S VG+F LTVSLR+Q+         S+ +  E+AF +Y FC L+LF VV NF+G
Sbjct:    5 SAKAAPVNGILADLVAQYNKNTPRKMKLIDGFLAYVLATGVLQFIYCMLVGTFPFNSFLSGFISTVGVFVLTVSLRMQINPTNAEAFSSAPRSAERAFADYLFCNLILFLVVMNFMG 121
[Close]
BLAST of NO04G03450 vs. NCBI_GenBank
Match: OQR96028.1 (acyl-CoA synthetase [Thraustotheca clavata])

HSP 1 Score: 113.6 bits (283), Expect = 3.900e-22
Identity = 58/118 (49.15%), Postives = 84/118 (71.19%), Query Frame = 0 
Query:    3 SSITAVDVKGVGKSLMAEYKKSATTQTKIVDLFLAFILVTGILQFLYCVIVGSFPFNSFLSGFLSCVGMFALTVSLRLQV---------SSEKVVEKAFGEYAFCCLLLFFVVFNFIG 112
            +S  + +V G+   L+ +Y K+   + K++D FLA++L TGILQF+YC++VG+FPFNSFLSGF+S VG+F LTVSLR+Q+         S+ +  E+AF +Y FC L+LF VV NF+G
Sbjct:  468 ASTPSNNVNGIVSDLLTQYSKNTPRKMKLIDGFLAYVLATGILQFVYCMLVGTFPFNSFLSGFISTVGVFVLTVSLRMQINPTNAEAFDSAPRSSERAFADYLFCNLILFLVVMNFMG 585
[Close]
BLAST of NO04G03450 vs. NCBI_GenBank
Match: XP_008621413.1 (oligosaccharyl transferase complex subunit OST4 [Saprolegnia diclina VS20] >XP_008621414.1 oligosaccharyl transferase complex subunit OST4, variant [Saprolegnia diclina VS20] >EQC25156.1 oligosaccharyl transferase complex subunit OST4 [Saprolegnia diclina VS20] >EQC25157.1 oligosaccharyl transferase complex subunit OST4, variant [Saprolegnia diclina VS20])

HSP 1 Score: 112.5 bits (280), Expect = 8.700e-22
Identity = 55/112 (49.11%), Postives = 81/112 (72.32%), Query Frame = 0 
Query:    9 DVKGVGKSLMAEYKKSATTQTKIVDLFLAFILVTGILQFLYCVIVGSFPFNSFLSGFLSCVGMFALTVSLRLQV---------SSEKVVEKAFGEYAFCCLLLFFVVFNFIG 112
            +V G+   L+++Y K+   + K++D FLA++L TG+LQF+YC++VG+FPFNSFLSGF+S VG+F LTVSLR+Q+         S+ +  E+AF +Y FC  +LF VV NF+G
Sbjct:   14 NVNGILSDLLSQYSKNTPRKMKLIDGFLAYVLATGVLQFVYCMLVGTFPFNSFLSGFISTVGVFVLTVSLRMQINPTNADAFSSAPRTPERAFADYLFCNFILFLVVMNFMG 125
[Close]
BLAST of NO04G03450 vs. NCBI_GenBank
Match: XP_012204497.1 (hypothetical protein SPRG_09683 [Saprolegnia parasitica CBS 223.65] >KDO24851.1 hypothetical protein SPRG_09683 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 111.7 bits (278), Expect = 1.500e-21
Identity = 55/112 (49.11%), Postives = 81/112 (72.32%), Query Frame = 0 
Query:    9 DVKGVGKSLMAEYKKSATTQTKIVDLFLAFILVTGILQFLYCVIVGSFPFNSFLSGFLSCVGMFALTVSLRLQV---------SSEKVVEKAFGEYAFCCLLLFFVVFNFIG 112
            +V G+   L+++Y K+   + K++D FLA++L TG+LQF+YC++VG+FPFNSFLSGF+S VG+F LTVSLR+Q+         S+ +  E+AF +Y FC  +LF VV NF+G
Sbjct:   14 NVNGILSDLLSQYSKNTPRKMKLIDGFLAYVLATGVLQFVYCMLVGTFPFNSFLSGFISTVGVFVLTVSLRMQINPTNADAFSSAPRSSERAFADYLFCNFILFLVVMNFMG 125
[Close]
BLAST of NO04G03450 vs. NCBI_GenBank
Match: XP_012204504.1 (hypothetical protein SPRG_09690 [Saprolegnia parasitica CBS 223.65] >KDO24858.1 hypothetical protein SPRG_09690 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 111.7 bits (278), Expect = 1.500e-21
Identity = 55/112 (49.11%), Postives = 81/112 (72.32%), Query Frame = 0 
Query:    9 DVKGVGKSLMAEYKKSATTQTKIVDLFLAFILVTGILQFLYCVIVGSFPFNSFLSGFLSCVGMFALTVSLRLQV---------SSEKVVEKAFGEYAFCCLLLFFVVFNFIG 112
            +V G+   L+++Y K+   + K++D FLA++L TG+LQF+YC++VG+FPFNSFLSGF+S VG+F LTVSLR+Q+         S+ +  E+AF +Y FC  +LF VV NF+G
Sbjct:   14 NVNGILSDLLSQYSKNTPRKMKLIDGFLAYVLATGVLQFVYCMLVGTFPFNSFLSGFISTVGVFVLTVSLRMQINPTNADAFSSAPRSSERAFADYLFCNFILFLVVMNFMG 125
[Close]
BLAST of NO04G03450 vs. NCBI_GenBank
Match: CCI42408.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 109.4 bits (272), Expect = 7.400e-21
Identity = 54/97 (55.67%), Postives = 74/97 (76.29%), Query Frame = 0 
Query:   20 EYKKSATTQTKIVDLFLAFILVTGILQFLYCVIVGSFPFNSFLSGFLSCVGMFALTVSLRLQVSS-----EKVVEKAFGEYAFCCLLLFFVVFNFIG 112
            +Y+K    Q +++D FLA++L TGILQF+YCV+VG+FPFNSFLSGF+  VG+F LTVSLR+QV       ++  ++AF +Y FC L+LF VVFNF+G
Sbjct:   25 QYRKETPKQLQLLDGFLAYVLATGILQFVYCVLVGNFPFNSFLSGFICTVGVFVLTVSLRMQVDPTNEFVDRTEQRAFADYLFCNLILFLVVFNFMG 121
[Close]
BLAST of NO04G03450 vs. NCBI_GenBank
Match: ETM01177.1 (hypothetical protein L917_02201 [Phytophthora parasitica] >ETM01178.1 hypothetical protein, variant [Phytophthora parasitica])

HSP 1 Score: 109.0 bits (271), Expect = 9.700e-21
Identity = 54/116 (46.55%), Postives = 81/116 (69.83%), Query Frame = 0 
Query:    1 MISSITAVDVKGVGKSLMAEYKKSATTQTKIVDLFLAFILVTGILQFLYCVIVGSFPFNSFLSGFLSCVGMFALTVSLRLQVSSE-----KVVEKAFGEYAFCCLLLFFVVFNFIG 112
            M+   T   V  +   L A+Y K+   + K++D FLA++L TG+LQF+YC++VG+FPFNSFL+GF+  VG+F L VSLR+Q++ E     +  ++AF +Y FC ++LF VVFNF+G
Sbjct:    1 MVKKTTDAGVGSILGDLCAKYDKTTPKKIKLIDGFLAYVLATGVLQFIYCLLVGNFPFNSFLAGFVCTVGVFVLAVSLRMQINPENNFGDRTEQRAFADYLFCNIILFLVVFNFMG 116
[Close]
BLAST of NO04G03450 vs. NCBI_GenBank
Match: CCA17765.1 (dolichyldiphosphooligosaccharideprotein glycosyltransferase subunit putative [Albugo laibachii Nc14])

HSP 1 Score: 108.6 bits (270), Expect = 1.300e-20
Identity = 53/97 (54.64%), Postives = 75/97 (77.32%), Query Frame = 0 
Query:   20 EYKKSATTQTKIVDLFLAFILVTGILQFLYCVIVGSFPFNSFLSGFLSCVGMFALTVSLRLQVS-----SEKVVEKAFGEYAFCCLLLFFVVFNFIG 112
            +Y+K    + +++D FLA++L TGILQF+YC++VGSFPFNSFLSGF+  VG+F LTVSLR+QV      +++  ++AF +Y FC L+LF VVFNF+G
Sbjct:   25 QYRKETPKKLQLLDGFLAYVLATGILQFVYCILVGSFPFNSFLSGFICTVGVFVLTVSLRMQVDASNKFTDRSEQRAFADYLFCNLILFLVVFNFMG 121
[Close]
BLAST of NO04G03450 vs. NCBI_GenBank
Match: OWZ11579.1 (Dolichyl-diphosphooligosaccharide-protein glycosyltransferase [Phytophthora megakarya])

HSP 1 Score: 107.8 bits (268), Expect = 2.200e-20
Identity = 55/108 (50.93%), Postives = 79/108 (73.15%), Query Frame = 0 
Query:   12 GVGKSL---MAEYKKSATTQTKIVDLFLAFILVTGILQFLYCVIVGSFPFNSFLSGFLSCVGMFALTVSLRLQVSSE-----KVVEKAFGEYAFCCLLLFFVVFNFIG 112
            GVG  L    A+Y K+   + K++D FLA++L TG+LQF+YC++VG+FPFNSFL+GF+  VG+F L VSLR+Q++ E     +  ++AF +Y FC +LLF VVFNF+G
Sbjct:    9 GVGSILGDFCAKYDKTTPKKIKLIDGFLAYVLATGVLQFIYCLLVGTFPFNSFLAGFVCTVGVFVLAVSLRMQINPENNFDDRTEQRAFADYLFCNILLFLVVFNFMG 116
The following BLAST results are available for this feature:
BLAST of NO04G03450 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Position :
0
Zoom :
x 1
50100150200250300350400450500550600650SequenceEWM28787.1OQR92618.1OQR96028.1XP_008621413.1XP_012204497.1XP_012204504.1CCI42408.1ETM01177.1CCA17765.1OWZ11579.1
Match NameE-valueIdentityDescription
EWM28787.17.600e-4280.18dolichyl-diphosphooligosaccharide--protein glycosy... [more]
OQR92618.17.900e-2350.43dolichyl-diphosphooligosaccharide-protein glycosyl... [more]
OQR96028.13.900e-2249.15acyl-CoA synthetase [Thraustotheca clavata][more]
XP_008621413.18.700e-2249.11oligosaccharyl transferase complex subunit OST4 [S... [more]
XP_012204497.11.500e-2149.11hypothetical protein SPRG_09683 [Saprolegnia paras... [more]
XP_012204504.11.500e-2149.11hypothetical protein SPRG_09690 [Saprolegnia paras... [more]
CCI42408.17.400e-2155.67unnamed protein product [Albugo candida][more]
ETM01177.19.700e-2146.55hypothetical protein L917_02201 [Phytophthora para... [more]
CCA17765.11.300e-2054.64dolichyldiphosphooligosaccharideprotein glycosyltr... [more]
OWZ11579.12.200e-2050.93Dolichyl-diphosphooligosaccharide-protein glycosyl... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL076nonsL076Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR058ncniR058Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR106ngnoR106Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK009489NSK009489Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO04G03450.1NO04G03450.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO04G03450.1NO04G03450.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO04G03450 ID=NO04G03450|Name=NO04G03450|organism=Nannochloropsis oceanica|type=gene|length=655bp
ATGATATCTTCAATTACGGCCGTGGACGTCAAGGGCGTGGGCAAGAGCTT
GATGGCCGAATACAAGAAGAGTGCCACGACCCAAACCAAAATTGTGGACC
TTTTCCTGGCCTTCATTCTTGTGACGGGCATTCTCCAGTTCCTCTACTGT
GTCATTGTAGGCTCCTTCCCATTTAATTCCTTTCTTTCTGGCTTTTTGAG
CTGCGTTGGCATGTTCGCCTTGACAGgtacgtttgttggaagtcaagaga
tggtggttggagagggcctgggaagggagggcgagcgaggcatgagggca
gagaggggaaggattcaagggcatgtgttctgccgctggtctgcatattc
ttgcctgcgcttgctacaacgcttgcatgaccatcatgtgaggtagcggg
tgggaaagagcaaggagaaggatcaagctgtatcggcgctctctcattat
tcatcattgccaatttttatttacgcattttttttcctacgacacataca
ctcatgtacacactcgcactgtcacgttcttcatgatgtacgtagTGTCA
TTGCGGCTGCAGGTGAGCTCGGAGAAGGTGGTGGAGAAGGCCTTCGGGGA
ATACGCGTTTTGCTGCCTCTTGCTCTTCTTCGTCGTCTTCAACTTTATCG
GGTAG
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protein sequence of NO04G03450.1

>NO04G03450.1-protein ID=NO04G03450.1-protein|Name=NO04G03450.1|organism=Nannochloropsis oceanica|type=polypeptide|length=112bp
MISSITAVDVKGVGKSLMAEYKKSATTQTKIVDLFLAFILVTGILQFLYC
VIVGSFPFNSFLSGFLSCVGMFALTVSLRLQVSSEKVVEKAFGEYAFCCL
LLFFVVFNFIG*
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Synonyms
Publications