NO04G03400, NO04G03400 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO04G03400 vs. NCBI_GenBank
Match: EWM28672.1 (hypothetical protein Naga_100002g49 [Nannochloropsis gaditana]) HSP 1 Score: 379.4 bits (973), Expect = 1.700e-101 Identity = 213/316 (67.41%), Postives = 240/316 (75.95%), Query Frame = 0 Query: 187 VRKDRQAIGGRASSTEADEAPVPLDPLLKKAQEDIMSREFDRTLVIEEFSAPRVVDR-RRPTPAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEGN----AVRGRKKIQFQGVAAEAAAAAVKEWTGVPENLRYDPTFELPIPSETVVSLSDIATKFDDAIMTDQAKSLPTLAELGKKAKGSILKRQQEEEEKVAKELEPLDDYDLSAAILGEGRPVLGIGLPYLQSCHTVVILVTLLCAFVEFPGFPLTNFPYELREFLKQGLIVIYAINAVLAWDSIKEAKKREQSVFFWALKCFVLGALAHNELLSIRVKPQ 498 VRKDR GG AS EA EA P+DP LK+AQEDIM REFDR LV+EEF+ PRV DR R PTP+ +EGN A + R+K Q + ++ AA+ +GVPENLRYDPT ELPIPSETVVSLSD+ATKFD AI T + +LPTLAELGKKAK SIL+RQ EEEEK KELEP+DDYDLS+AILGEGRPVLGIGLPYLQSCHTV+ILV+LLCAF+EFPGFPLTNFPYELR+FLKQGL+ +Y INAVLAWDSIKEA+KR+QSVFFWALKCFVLGALAHNELL IR KPQ Sbjct: 97 VRKDRSQEGGAAS--EAVEASPPMDPRLKQAQEDIMRREFDRELVLEEFATPRVKDRVRIPTPS-----------------PVVADRQLEKGEREGNGRYEAKQDRQKEQNE--RSDTLDAAIN--SGVPENLRYDPTLELPIPSETVVSLSDLATKFDAAIET-KGTALPTLAELGKKAKVSILRRQLEEEEKATKELEPIDDYDLSSAILGEGRPVLGIGLPYLQSCHTVIILVSLLCAFIEFPGFPLTNFPYELRDFLKQGLVAVYLINAVLAWDSIKEARKRDQSVFFWALKCFVLGALAHNELLLIREKPQ 388
BLAST of NO04G03400 vs. NCBI_GenBank
Match: XP_005855879.1 (hypothetical protein NGA_2005520, partial [Nannochloropsis gaditana CCMP526] >XP_005856003.1 hypothetical protein NGA_2005510, partial [Nannochloropsis gaditana CCMP526] >EKU20351.1 hypothetical protein NGA_2005510, partial [Nannochloropsis gaditana CCMP526] >EKU20472.1 hypothetical protein NGA_2005520, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 377.9 bits (969), Expect = 5.000e-101 Identity = 234/415 (56.39%), Postives = 274/415 (66.02%), Query Frame = 0 Query: 90 MTLLHLTVLMTVMALPMGCTFISSLPANHVHLRTLSAGTVARRPGAGLSLQSDFCLVITGDARLR--HLRLLAEXXXXXXXXXXXXXXXXXXXXXXXXXVRKDRQAIGGRASSTEADEAPVPLDPLLKKAQEDIMSREFDRTLVIEEFSAPRVVDR-RRPTPAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEGN----AVRGRKKIQFQGVAAEAAAAAVKEWTGVPENLRYDPTFELPIPSETVVSLSDIATKFDDAIMTDQAKSLPTLAELGKKAKGSILKRQQEEEEKVAKELEPLDDYDLSAAILGEGRPVLGIGLPYLQSCHTVVILVTLLCAFVEFPGFPLTNFPYELREFLKQGLIVIYAINAVLAWDSIKEAKKREQSVFFWALKCFVLGALAHNELLSIRVKPQ 498 ++L +T LM V+A+ F+SS PA + R+ G V R+ + + F + G +RL AE VRKDR GG AS EA EA P+DP LK+AQEDIM REFDR LV+EEF+ PRV DR R PTP+ +EGN A + R+K Q + ++ AA+ +GVPENLRYDPT ELPIPSETVVSLSD+ATKFD AI T + +LPTLAELGKKAK SIL+RQ EEEEK KELEP+DDYDLS+AILGEGRPVLGIGLPYLQSCHTV+ILV+LLCAF+EFPGFPLTNFPYELR+FLKQGL+ +Y INAVLAWDSIKEA+KR+QSVFFWALKCFVLGALAHNELL IR KPQ Sbjct: 6 ISLFQITSLMAVVAVHPVAAFVSSKPAFNFRSRSF-YGIVNRQ-----EITTPFRANLVGPVNPSPCRVRLKAE----EASKEPEGDGGRRRKVIRKKRVRKDRSQEGGAAS--EAGEASPPMDPRLKQAQEDIMRREFDRELVLEEFATPRVKDRVRIPTPS-----------------AVVADRQLEKGEREGNGRYEAKQDRQKEQNE--RSDTLDAAIN--SGVPENLRYDPTLELPIPSETVVSLSDLATKFDAAIET-KGTALPTLAELGKKAKVSILRRQLEEEEKATKELEPIDDYDLSSAILGEGRPVLGIGLPYLQSCHTVIILVSLLCAFIEFPGFPLTNFPYELRDFLKQGLVAVYLINAVLAWDSIKEARKRDQSVFFWALKCFVLGALAHNELLLIREKPQ 386
BLAST of NO04G03400 vs. NCBI_GenBank
Match: CBN78270.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 129.4 bits (324), Expect = 3.100e-26 Identity = 85/213 (39.91%), Postives = 112/213 (52.58%), Query Frame = 0 Query: 316 YDPTFELPIPSETVVSLSDIATKFDDAIMTDQAKSLPTLAELGKKAKGSILKRQQEEEEKVAK-------------------ELEP----------LDDYDLSAAILGEGRPVLGIGLPYLQSCHTVVILVTLLCAFVEFPGFPLTNFPYELREFLKQGLIVIYAINAVLAWDSIKEAKKREQSVFFWALKCFVLGALAHNELLSI---RVKP 497 +D ELP+ SE S + D LP EL KK R+++ E+K K EL+P + YD +++LGEG+P +GI YLQS HTV++ + LLC FVE PGFPLT+ PY++REFLK GL+V Y INA +A+ S EAK+ Q FWA+K FVLG L+ NEL I +VKP Sbjct: 191 FDLDVELPMESE---SRKSGKGGLGSVMSPDGVMPLPDFRELAKK------PRKKDREQKATKVDEANKVERGNMAAFTKLLELDPEADSEEALFTTESYDAFSSVLGEGKPFVGIANSYLQSGHTVLLALVLLCGFVEIPGFPLTSLPYDVREFLKTGLLVTYVINAGIAYLSYLEAKRIGQPAGFWAVKGFVLGGLSFNELSQIEPVKVKP 394
BLAST of NO04G03400 vs. NCBI_GenBank
Match: XP_005707177.1 (hypothetical protein Gasu_21150 [Galdieria sulphuraria] >EME30657.1 hypothetical protein Gasu_21150 [Galdieria sulphuraria]) HSP 1 Score: 106.3 bits (264), Expect = 2.800e-19 Identity = 56/142 (39.44%), Postives = 85/142 (59.86%), Query Frame = 0 Query: 350 SLPTLAELGKKAKGSILKRQQEEEEKVAKELEPLDDYDLSAAILGEGRPVLG--IGLPYLQSCHTVVILVTLLCAFVEFPGFPLTNFPYELREFLKQGLIVIYAINAVLAWDSIKEAKKREQSVFFWALKCFVLGALAHNEL 490 S+ +L E KK + ++ +++ K ++ D YD +AA++G GR LPYLQS H V ++V LLC FV +PGF LT P RE L++ L +++++N +LA + EAK+R Q + W +KC +LG LA NEL Sbjct: 185 SIKSLTENFKKRRDQFVQNLEKDPNYGLKRIDEDDSYDWAAALIGRGRANKKGFFLLPYLQSGHIVCLVVVLLCTFVYYPGFYLTELPESTREVLRKSLAIVFSVNGILAGYAGWEAKRRNQPIVLWIIKCMLLGGLALNEL 326
BLAST of NO04G03400 vs. NCBI_GenBank
Match: XP_005714757.1 (unnamed protein product [Chondrus crispus] >CDF34938.1 unnamed protein product [Chondrus crispus]) HSP 1 Score: 104.0 bits (258), Expect = 1.400e-18 Identity = 71/171 (41.52%), Postives = 105/171 (61.40%), Query Frame = 0 Query: 331 SLSDIATKFDDAIMTDQA-KSLP--TLAEL-------GKKAKGSILKRQQEEEEKVAKELEPLDDYDLSAAILGEGRP-VLGI-GLPYLQSCHTVVILVTLLCAFVEFPGFPLTNFPYELREFLKQGLIVIYAINAVLAWDSIKEAKKREQSVFFWALKCFVLGALAHNEL 490 +L D+ K + +I ++A K+LP T+ EL GK+A+ ++ +++ + + + P +YDL++AI+G G P G+ LPYLQS H +++LVTLLC FV +PGFPLT LR +LK GL + Y +NA LA + K+A+KR Q FWALK G +A NEL Sbjct: 159 ALEDV--KEERSIEVEEARKALPTNTIRELTQAYRKKGKEAQ-VLIDELEKDPDFMFQTGNPEGEYDLTSAIIGTGSPNKQGVYVLPYLQSGHLLLLLVTLLCTFVYYPGFPLTELEDSLRGYLKVGLAITYTLNAGLAILAFKDAQKRGQPAAFWALKTAFFGNIAFNEL 326
BLAST of NO04G03400 vs. NCBI_GenBank
Match: XP_005538698.1 (hypothetical protein CYME_CMS009C [Cyanidioschyzon merolae strain 10D] >BAM82662.1 hypothetical protein CYME_CMS009C [Cyanidioschyzon merolae strain 10D]) HSP 1 Score: 89.7 bits (221), Expect = 2.700e-14 Identity = 50/116 (43.10%), Postives = 70/116 (60.34%), Query Frame = 0 Query: 379 ELEPLDDYDLSAAILGEGRP---VLGIGL-PYLQSCHTVVILVTLLCAFVEFPGFPLTNFPYELREFLKQGLIVIYAINAVLAWDSIKEAKKREQSVFFWALKCFVLGALAHNELL 491 E P YD AA+LG+GRP LG L PYLQ+ H V ++ L+C F G PLTN ++R+ L++GL+++ +N V+A + EA++R QS +FW K LG LA ELL Sbjct: 286 EQNPETGYDRVAAVLGKGRPSKRFLGTLLGPYLQNSHLVGLVTVLICTFGYDAGNPLTNLSEDVRDKLRKGLLIVATVNLVMAVQAYIEARRRNQSPWFWFAKTMALGGLALGELL 401
BLAST of NO04G03400 vs. NCBI_GenBank
Match: CEM11341.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 87.4 bits (215), Expect = 1.300e-13 Identity = 56/150 (37.33%), Postives = 83/150 (55.33%), Query Frame = 0 Query: 355 AELGKKAKGSILKRQQEE-------EEKVAKELEPLDDYDLSAAILGEG----RPVLG-IGLPYLQSCHTVVILVTLLCAFVEFPGFPLTNFPYELREFLKQGLIVIYAINAVLAWDSIKEAKKREQSVFFWALKCFVLGALAHNELLSI 493 A+ +K + S +R +EE + + + +E D A+ GEG +P LG I +LQ+ H V++ V LC VE PG PLTN P +R F GL +++A+N VL+ SI A R+Q +FWA K +LG LA++EL+ I Sbjct: 242 AKAREKIRRSDTERIREELLYDPFADTQFERFVEDRKPVDAVGAVFGEGLAPAQPFLGFIPTSFLQTGHLVLLFVVALCGLVEDPGNPLTNLPLPIRNFFVTGLGLVFAVNVVLSALSISPAIARKQPWYFWAFKTLLLGGLAYDELMQI 391
BLAST of NO04G03400 vs. NCBI_GenBank
Match: XP_005789621.1 (hypothetical protein EMIHUDRAFT_454975 [Emiliania huxleyi CCMP1516] >EOD37192.1 hypothetical protein EMIHUDRAFT_454975 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 86.3 bits (212), Expect = 3.000e-13 Identity = 45/108 (41.67%), Postives = 65/108 (60.19%), Query Frame = 0 Query: 384 DDYDLSAAILGEGRP--VLGIGLPYLQSCHTVVILVTLLCAFVEFPGFPLTNFPYELREFLKQGLIVIYAINAVLAWDSIKEAKKREQSVFFWALKCFVLGALAHNEL 490 + YD +A ++G G P LPYLQ+ H +++ V LL + V +PGFPLT P E R+ L QGL++ +AINA+ A + A +++Q V FW K + G LA EL Sbjct: 171 EPYDATARLIGRGLPNKAGAYVLPYLQTGHMLLLGVLLLSSSVSYPGFPLTEVPDEYRDLLHQGLLITFAINALAAASARGIAARKQQPVLFWMAKVLLFGGLALGEL 278
BLAST of NO04G03400 vs. NCBI_GenBank
Match: EJK55042.1 (hypothetical protein THAOC_25274 [Thalassiosira oceanica]) HSP 1 Score: 85.9 bits (211), Expect = 3.900e-13 Identity = 66/197 (33.50%), Postives = 91/197 (46.19%), Query Frame = 0 Query: 335 IATKFDDAIMTDQAKSLPTLAELGKKAKGSILKRQQEEEEKVAKELEPLDDYDLS----------AAILGEGRP----------------------VLGIGLPYLQSCHTVVILVTLLCAFVEFPGFPLTNFPYELREFLKQGLIVIYAINAVLAWDSIKEAKKREQSVFFWALKCFVLGALAHNELLSIRVKPQAS 500 +A K + D+ P+ A +K +KR E E++PL D D S +A+LG+ P LGIG LQ H L +L AFVE+PGFPLTN P LR L+ GL +YAINAVLA + A +R QS W K F +GA+A+++L+ I +A+ Sbjct: 51 LARKREKQAEDDERAGRPSSAVPTRKK----IKRSDVEAYTKLLEMDPLADEDSSYFEEEGVDFISALLGDVEPGVGTESDENTNKSGKRVLKKTSFLGIGSGPLQVGHFFGALSAVLMAFVEYPGFPLTNLPDPLRGALQGGLATVYAINAVLAVLAFLSASERNQSPALWGAKTFAVGAIAYDQLMQIPTPGEAA 243
BLAST of NO04G03400 vs. NCBI_GenBank
Match: XP_002176913.1 (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >EEC51376.1 predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 85.5 bits (210), Expect = 5.100e-13 Identity = 56/138 (40.58%), Postives = 78/138 (56.52%), Query Frame = 0 Query: 366 LKRQQEEEEKVAKELEPLDDYDLS----------AAILGE-GRPVLGIGLPYLQSCHTVVILVTLLCAFVEFPGFPLTNFPYELREFLKQGLIVIYAINAVLAWDSIKEAKKREQSVFFWALKCFVLGALAHNELLSI 493 +KR +E + E +P D D S +A+LGE +P +GI LQ H V L LL A+VE+PGFPLTN P LR+ L+ GL IYAIN VLA ++ +A +R Q + W K F +G LA+++L + Sbjct: 161 IKRSDKEAFRRLLEQQPFADADDSFFEEEAYGTVSALLGERAKPFIGIPTGPLQVGHFVGALGLLLMAYVEYPGFPLTNLPTPLRDCLQGGLGTIYAINTVLAVLALFKAGERGQPKWLWIAKTFSVGGLAYDQLTQL 298 The following BLAST results are available for this feature:
BLAST of NO04G03400 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 13
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO04G03400 ID=NO04G03400|Name=NO04G03400|organism=Nannochloropsis oceanica|type=gene|length=1794bpback to top protein sequence of NO04G03400.1 >NO04G03400.1-protein ID=NO04G03400.1-protein|Name=NO04G03400.1|organism=Nannochloropsis oceanica|type=polypeptide|length=501bpback to top Synonyms
Publications
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