NO04G03330, NO04G03330 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO04G03330 vs. NCBI_GenBank
Match: EWM28799.1 (protein of unknown function DUF1279 [Nannochloropsis gaditana]) HSP 1 Score: 229.9 bits (585), Expect = 9.100e-57 Identity = 143/280 (51.07%), Postives = 178/280 (63.57%), Query Frame = 0 Query: 1 MLRGPGCAVGLLRGSGVTGRHAP-GSIAWVRPSAAFQYH-QSRLCFGTHHPPRHFIVNPCRPSCTGNLGAKPPQDENTLSIEGPRALTRNAASNLPSAVLLRTPARRFGTSMRLGS-SSSGDRNKSTSSR---TNRSGNEKSTGEGSAVPG----QATPVVEEEGKIGKLRLMIKRYGAVAVVTYLGVYVGTLGILFATVESGVNPFDYGLDSGWLVEKATGILEGYSWSEPFVEAIQNNPHAGNFAVAWILTKFTEPVRMLVTITIVPRIARALGKAPA 271 M RG G VGLLR S +P + W+RP+A H QSRLCF + P R+ + G A+ + + +++ R A NL S L R G++ RLGS +SSG+R+ ST+ GN +S GEG A P ++T E+ K+GKLRLM+KRYGAVAV+TYLGVYV TL LFA VESG+ PFDYGLDS WLVEKAT +LE YSWSEP VE IQ NPHAGNFAVAW+LTK TEP+RM++TI +VPRIAR LG+AP+ Sbjct: 1 MFRGQGGVVGLLRFSCAAPMRSPVCGLTWIRPTATLSSHEQSRLCFVSASPQRYLAFKTHIHADFGGPHARIRRADRLDALDDFYVTRR--APNL-SLGLFHISHRLAGSNTRLGSGTSSGERSSSTTCNGRDIESKGNLRSQGEGGAAPAGMGTESTRPQEDVNKMGKLRLMVKRYGAVAVITYLGVYVVTLSALFAAVESGLTPFDYGLDSNWLVEKATHLLENYSWSEPLVETIQTNPHAGNFAVAWVLTKITEPLRMILTIAVVPRIARVLGRAPS 277
BLAST of NO04G03330 vs. NCBI_GenBank
Match: XP_005855884.1 (hypothetical protein NGA_2087520 [Nannochloropsis gaditana CCMP526] >XP_005856007.1 hypothetical protein NGA_2087510 [Nannochloropsis gaditana CCMP526] >EKU20355.1 hypothetical protein NGA_2087510 [Nannochloropsis gaditana CCMP526] >EKU20477.1 hypothetical protein NGA_2087520 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 229.2 bits (583), Expect = 1.600e-56 Identity = 142/280 (50.71%), Postives = 178/280 (63.57%), Query Frame = 0 Query: 1 MLRGPGCAVGLLRGSGVTGRHAP-GSIAWVRPSAAFQYH-QSRLCFGTHHPPRHFIVNPCRPSCTGNLGAKPPQDENTLSIEGPRALTRNAASNLPSAVLLRTPARRFGTSMRLGSSSS-GDRNKSTSSR---TNRSGNEKSTGEGSAVPG----QATPVVEEEGKIGKLRLMIKRYGAVAVVTYLGVYVGTLGILFATVESGVNPFDYGLDSGWLVEKATGILEGYSWSEPFVEAIQNNPHAGNFAVAWILTKFTEPVRMLVTITIVPRIARALGKAPA 271 M RG G VGLLR S +P + W+RP+A H QSRLCF + P R+ + G A+ + + +++ R A NL S L R G++ RLGS +S G+R+ ST+ GN +S GEG A P +++ E+ K+GKLRLM+KRYGAVAV+TYLGVYV TL LFA VESG+ PFDYGLDS WLVEKAT +LE YSWSEP VE IQ NPHAGNFAVAW+LTKFTEP+RM++TI +VPRIAR LG+AP+ Sbjct: 1 MFRGQGGVVGLLRFSCAAPMRSPVCGLTWIRPTATLSSHEQSRLCFVSASPQRYLAFKTHIHADFGGPHARIRRADRLDALDDFYVTRR--APNL-SLGLFHISHRLAGSNTRLGSGTSCGERSSSTTCNGRDIESKGNLRSQGEGGAAPAGMGTESSRPQEDVNKMGKLRLMVKRYGAVAVITYLGVYVVTLSALFAAVESGLTPFDYGLDSNWLVEKATHLLENYSWSEPLVETIQTNPHAGNFAVAWVLTKFTEPLRMILTIAVVPRIARVLGRAPS 277
BLAST of NO04G03330 vs. NCBI_GenBank
Match: GBG29862.1 (Hypothetical Protein FCC1311_060822 [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 94.7 bits (234), Expect = 4.600e-16 Identity = 49/115 (42.61%), Postives = 73/115 (63.48%), Query Frame = 0 Query: 157 IGKLRLMIKRYGAVAVVTYLGVYVGTLGILFATVESGVNPFDYGLDSGWLVEKATGILEGYSWSEPFVEAIQNNPHAGNFAVAWILTKFTEPVRMLVTITIVPRIARALGKAPAR 272 + +++ +I+ +G VA+ Y G+YVGTLG+L+ VE+ + G V K+TG+ FV+ + NP GNFAVAWILTKFTEP R+L+ + + PR+ARA+G AP + Sbjct: 227 VSRIKALIRDFGPVAIGVYGGIYVGTLGLLYGLVEADI----VGAGDAISVLKSTGL-------NHFVDMDKINPRMGNFAVAWILTKFTEPPRLLLALAVTPRVARAIGWAPRK 330
BLAST of NO04G03330 vs. NCBI_GenBank
Match: GAX13344.1 (hypothetical protein FisN_17Hh287 [Fistulifera solaris]) HSP 1 Score: 84.0 bits (206), Expect = 8.100e-13 Identity = 51/130 (39.23%), Postives = 77/130 (59.23%), Query Frame = 0 Query: 151 VEEEGKIGKLRL--MIKRYGAVAVVTYLGVYVGTLGILFATVESGV-NP---FDY-GLDSGWLVEKATGI----LEGYSWSEPFVEAIQNNPHAGNFAVAWILTKFTEPVRMLVTITIVPRIARALGKAP 270 + E+ K G L M+K+YG V + TYLGVYV TL + F +E+GV +P F + G DSG + + ++ ++ ++P V ++ P NFAVAWI KFTEPVR+ + + + PR+AR +G P Sbjct: 87 LREDPKKGALAFGAMMKKYGPVFIGTYLGVYVTTLALFFGGIETGVLDPVVLFQWIGSDSGSVTSTTYDLVMEFMKNHAVTKPAVPYLEKYPAMANFAVAWITVKFTEPVRLPIALFLTPRVARMVGYRP 216
BLAST of NO04G03330 vs. NCBI_GenBank
Match: XP_004345946.1 (hypothetical protein ACA1_183360 [Acanthamoeba castellanii str. Neff] >ELR21402.1 hypothetical protein ACA1_183360 [Acanthamoeba castellanii str. Neff]) HSP 1 Score: 78.6 bits (192), Expect = 3.400e-11 Identity = 45/108 (41.67%), Postives = 65/108 (60.19%), Query Frame = 0 Query: 156 KIGKLRLMIKRYGAVAVVTYLGVYVGTLGILFATVESGVNPFDYGLDSGWLVEKATGILEGYSWSEPFVEAIQNNPHAGNFAVAWILTKFTEPVRMLVTITIVPRIAR 264 K+GK+R +K+YGAV VVTY G+Y TL + SG+ L +G +V G++E + F E++ P GNFA+AW+ TKFTEP+R +T+ I P I+R Sbjct: 165 KLGKIRTFLKKYGAVGVVTYFGLYGATLASFYGAYSSGL------LFAGDVV----GLIEFLHLGDFFDESLL-TPKVGNFALAWVSTKFTEPLRFAITLGITPSISR 261
BLAST of NO04G03330 vs. NCBI_GenBank
Match: XP_002288717.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED94153.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 78.2 bits (191), Expect = 4.400e-11 Identity = 61/213 (28.64%), Postives = 98/213 (46.01%), Query Frame = 0 Query: 98 LLRTPARRFGTSMRLGSSSSGDRNKSTSSRTNRSGNEKSTGEGSAVPGQATPVVEEEGKIGKLRLMIKRYGAVAVVTYLGVYVGTLGILFATVESG------------------------VNPFDYGL-------------------DSGWLVEKATGILEGYSWSEPFVEAIQNNPHAGNFAVAWILTKFTEPVRMLVTITIVPRIARALGK 268 L+RT ++ LG+ SS N STS++ + SGN+ E + T + ++ K++L+ K+YG V V TY+ +Y TL +F ++E G + P G + LV+ TG L+ + W+ + E ++ NPH N AVAW + KFTEPVR+ I +VP++A+ +GK Sbjct: 119 LMRTSSKSKVYFSSLGTMSSS--NHSTSTKPS-SGNDSVKDESN-----KTDITKQLSTKEKVKLLFKKYGFVFVGTYMSIYFATLLSIFGSLEMGLLDPDTLSQIFKVSKDLACETADVIGPTGTGASMNEAANAYAAEFKSDITDEKRSLVDIITGYLQTWDWTAKYAEKLEKNPHLANLAVAWFIVKFTEPVRLAAAIMVVPKVAKMVGK 323
BLAST of NO04G03330 vs. NCBI_GenBank
Match: GAX09246.1 (hypothetical protein FisN_17Lh287 [Fistulifera solaris]) HSP 1 Score: 77.8 bits (190), Expect = 5.800e-11 Identity = 63/191 (32.98%), Postives = 97/191 (50.79%), Query Frame = 0 Query: 91 SNLPSAVLLRTPARRFGTSMRLGSSSSGDRNKSTSSRTNRSGNEKSTGEGSAVPGQATPVVEEEGKIGKLRL--MIKRYGAVAVVTYLGVYVGTLGILFATVESGV-NP---FDY-GLDSGWLVEKAT-----GILEGYSWSEPFVEAIQNNPHAGNFAVAWILTKFTEPVRMLVTITIVPRIARALGKAP 270 S+LP + + R F + + G+ + R ++ R N S + + E+ K G L M+K+YG V + TYL VYV TL +LF +E+GV +P F + G DSG + T ++ ++ ++P V ++ P NFAVAWI KFTEPVR+ V + + PR+AR +G P Sbjct: 46 SHLPQPIRI-LQQRCFSATTKEGTRAERFRERAEEMRDNAS--------------ERWHELREDPKKGALAFGAMMKKYGPVFIGTYLSVYVTTLALLFGGIETGVLDPVVLFQWIGSDSGSVSASTTYDLVMEFMKNHAVTKPAVPYLEKYPSMANFAVAWITVKFTEPVRLPVALFLTPRVARMVGYRP 221
BLAST of NO04G03330 vs. NCBI_GenBank
Match: XP_009826165.1 (hypothetical protein H257_03670 [Aphanomyces astaci] >ETV84473.1 hypothetical protein H257_03670 [Aphanomyces astaci]) HSP 1 Score: 76.3 bits (186), Expect = 1.700e-10 Identity = 48/127 (37.80%), Postives = 69/127 (54.33%), Query Frame = 0 Query: 151 VEEEGKIGKLRLMIKRYGAVAVVTYLGVYVGTLGILFATVESGV---------NPFDYGLDSGWLVEKATGILEGYSWS---EPFVEAIQNNPHAGNFAVAWILTKFTEPVRMLVTITIVPRIARAL 266 V + G + K + + YG V V TYLGVYV TLG +FA +E+G+ + + D + + KAT L ++ S +P G+F +AW+ TKFTEPVR+ VT+ I PR+AR L Sbjct: 63 VAKSGPLQKFKDLWNTYGWVGVGTYLGVYVVTLGSMFAAIETGLLSTAAPSNKDDTNGSDDESFNIVKATNKLTDWTKSMGLGAHFNVPDVSPTTGSFLIAWVATKFTEPVRLAVTLMITPRLARFL 189
BLAST of NO04G03330 vs. NCBI_GenBank
Match: XP_008870915.1 (hypothetical protein H310_07317 [Aphanomyces invadans] >ETW00780.1 hypothetical protein H310_07317 [Aphanomyces invadans]) HSP 1 Score: 76.3 bits (186), Expect = 1.700e-10 Identity = 49/133 (36.84%), Postives = 67/133 (50.38%), Query Frame = 0 Query: 149 PVVEEEGKIGKLRLMIKRYGAVAVVTYLGVYVGTLGILFATVESGV----------------NPFDYGLDSGWLVEKATGILEGYSWSEPFVEAIQNNPHAGNFAVAWILTKFTEPVRMLVTITIVPRIARAL 266 P+ G + K + + +YG V V TYLGVYV TLG +F +E+GV F+ + L E I G ++ P V +P G F +AW+ TKFTEPVR+ VT+ I PR+AR L Sbjct: 56 PITTAGGPLQKFKDLWNKYGWVGVGTYLGVYVVTLGSMFVAIETGVLSTAAPSKATDSEDKNEAFNIVTATNKLTEWTKSIGLGAHFNVPDV-----SPTTGTFLIAWVATKFTEPVRLAVTLMITPRLARFL 183
BLAST of NO04G03330 vs. NCBI_GenBank
Match: CEO94899.1 (hypothetical protein PBRA_003712 [Plasmodiophora brassicae]) HSP 1 Score: 75.5 bits (184), Expect = 2.900e-10 Identity = 51/126 (40.48%), Postives = 69/126 (54.76%), Query Frame = 0 Query: 141 SAVPGQATPVVEEEGKI----GKLRLMIKRYGAVAVVTYLGVYVGTLGILFATVESGVNPFDYGLDSGWLVEKATGILEGYSWSEPFVEAIQNNPHAGNFAVAWILTKFTEPVRMLVTITIVPRIA 263 S P + TP+ + GKLR + +YG VAV TY YV TLG+++A +ES PF DS L++ + + Q NP AG+FAVAWIL KFTEP+R+ T+ + PRIA Sbjct: 47 SKAPLEQTPLEQATAAAQKAPGKLRDLWNKYGVVAVSTYAVTYVSTLGLIYALLES---PFLSPGDSLRLLDSI--------GAGRIFDLSQINPKAGSFAVAWILAKFTEPLRLGFTVLVTPRIA 161 The following BLAST results are available for this feature:
BLAST of NO04G03330 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20 Position : 0 Zoom : x 1
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO04G03330 ID=NO04G03330|Name=NO04G03330|organism=Nannochloropsis oceanica|type=gene|length=1481bpback to top protein sequence of NO04G03330.1 >NO04G03330.1-protein ID=NO04G03330.1-protein|Name=NO04G03330.1|organism=Nannochloropsis oceanica|type=polypeptide|length=272bpback to top Synonyms
Publications
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